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refactor: 将 BIOYOND_PolymerStation_ 前缀统一改为 YB_

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- 重命名 bottles.py 中所有工厂函数：BIOYOND_PolymerStation_* -> YB_*
- 重命名 bottle_carriers.py 中所有载具工厂函数和导入
- 更新 registry YAML 文件中的 module 引用
- 更新 MATERIAL_TYPE_MAPPINGS 配置中的类型字符串
- 更新测试文件和样例 JSON 中的类型引用
- 添加 YB_* 别名条目到 registry 以支持双键访问
This commit is contained in:
dijkstra402
2025-10-24 13:49:48 +08:00
parent fd73731130
commit 01adf7ca92
10 changed files with 266 additions and 110 deletions
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14
test/experiments/reaction_station_bioyond.json
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@@ -24,13 +24,13 @@
"Drip_back": "3a162cf9-6aac-565a-ddd7-682ba1796a4a" "Drip_back": "3a162cf9-6aac-565a-ddd7-682ba1796a4a"
}, },
"material_type_mappings": { "material_type_mappings": {
"烧杯": ["BIOYOND_PolymerStation_1FlaskCarrier", "3a14196b-24f2-ca49-9081-0cab8021bf1a"], "烧杯": ["YB_1FlaskCarrier", "3a14196b-24f2-ca49-9081-0cab8021bf1a"],
"试剂瓶": ["BIOYOND_PolymerStation_1BottleCarrier", ""], "试剂瓶": ["YB_1BottleCarrier", ""],
"样品板": ["BIOYOND_PolymerStation_6StockCarrier", "3a14196e-b7a0-a5da-1931-35f3000281e9"], "样品板": ["YB_6StockCarrier", "3a14196e-b7a0-a5da-1931-35f3000281e9"],
"分装板": ["BIOYOND_PolymerStation_6VialCarrier", "3a14196e-5dfe-6e21-0c79-fe2036d052c4"], "分装板": ["YB_6VialCarrier", "3a14196e-5dfe-6e21-0c79-fe2036d052c4"],
"样品瓶": ["BIOYOND_PolymerStation_Solid_Stock", "3a14196a-cf7d-8aea-48d8-b9662c7dba94"], "样品瓶": ["YB_Solid_Stock", "3a14196a-cf7d-8aea-48d8-b9662c7dba94"],
"90%分装小瓶": ["BIOYOND_PolymerStation_Solid_Vial", "3a14196c-cdcf-088d-dc7d-5cf38f0ad9ea"], "90%分装小瓶": ["YB_Solid_Vial", "3a14196c-cdcf-088d-dc7d-5cf38f0ad9ea"],
"10%分装小瓶": ["BIOYOND_PolymerStation_Liquid_Vial", "3a14196c-76be-2279-4e22-7310d69aed68"] "10%分装小瓶": ["YB_Liquid_Vial", "3a14196c-76be-2279-4e22-7310d69aed68"]
} }
}, },
"deck": { "deck": {

6
test/experiments/reaction_station_bioyond_test.json
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@@ -24,9 +24,9 @@
"Drip_back": "3a162cf9-6aac-565a-ddd7-682ba1796a4a" "Drip_back": "3a162cf9-6aac-565a-ddd7-682ba1796a4a"
}, },
"material_type_mappings": { "material_type_mappings": {
"烧杯": "BIOYOND_PolymerStation_1FlaskCarrier", "烧杯": "YB_1FlaskCarrier",
"试剂瓶": "BIOYOND_PolymerStation_1BottleCarrier", "试剂瓶": "YB_1BottleCarrier",
"样品板": "BIOYOND_PolymerStation_6VialCarrier" "样品板": "YB_6VialCarrier"
} }
}, },
"deck": { "deck": {

8
test/resources/test_bottle_carrier.py
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@@ -1,7 +1,7 @@
import pytest import pytest
from unilabos.resources.bioyond.bottle_carriers import BIOYOND_Electrolyte_6VialCarrier, BIOYOND_Electrolyte_1BottleCarrier from unilabos.resources.bioyond.bottle_carriers import BIOYOND_Electrolyte_6VialCarrier, BIOYOND_Electrolyte_1BottleCarrier
from unilabos.resources.bioyond.bottles import BIOYOND_PolymerStation_Solid_Vial, BIOYOND_PolymerStation_Solution_Beaker, BIOYOND_PolymerStation_Reagent_Bottle from unilabos.resources.bioyond.bottles import YB_Solid_Vial, YB_Solution_Beaker, YB_Reagent_Bottle
def test_bottle_carrier() -> "BottleCarrier": def test_bottle_carrier() -> "BottleCarrier":
@@ -16,9 +16,9 @@ def test_bottle_carrier() -> "BottleCarrier":
print(f"1烧杯载架: {beaker_carrier.name}, 位置数: {len(beaker_carrier.sites)}") print(f"1烧杯载架: {beaker_carrier.name}, 位置数: {len(beaker_carrier.sites)}")
# 创建瓶子和烧杯 # 创建瓶子和烧杯
powder_bottle = BIOYOND_PolymerStation_Solid_Vial("powder_bottle_01") powder_bottle = YB_Solid_Vial("powder_bottle_01")
solution_beaker = BIOYOND_PolymerStation_Solution_Beaker("solution_beaker_01") solution_beaker = YB_Solution_Beaker("solution_beaker_01")
reagent_bottle = BIOYOND_PolymerStation_Reagent_Bottle("reagent_bottle_01") reagent_bottle = YB_Reagent_Bottle("reagent_bottle_01")
print(f"\n创建的物料:") print(f"\n创建的物料:")
print(f"粉末瓶: {powder_bottle.name} - {powder_bottle.diameter}mm x {powder_bottle.height}mm, {powder_bottle.max_volume}μL") print(f"粉末瓶: {powder_bottle.name} - {powder_bottle.diameter}mm x {powder_bottle.height}mm, {powder_bottle.max_volume}μL")

14
test/resources/test_converter_bioyond.py
View File

@@ -12,13 +12,13 @@ lab_registry.setup()
type_mapping = { type_mapping = {
"烧杯": ("BIOYOND_PolymerStation_1FlaskCarrier", "3a14196b-24f2-ca49-9081-0cab8021bf1a"), "烧杯": ("YB_1FlaskCarrier", "3a14196b-24f2-ca49-9081-0cab8021bf1a"),
"试剂瓶": ("BIOYOND_PolymerStation_1BottleCarrier", ""), "试剂瓶": ("YB_1BottleCarrier", ""),
"样品板": ("BIOYOND_PolymerStation_6StockCarrier", "3a14196e-b7a0-a5da-1931-35f3000281e9"), "样品板": ("YB_6StockCarrier", "3a14196e-b7a0-a5da-1931-35f3000281e9"),
"分装板": ("BIOYOND_PolymerStation_6VialCarrier", "3a14196e-5dfe-6e21-0c79-fe2036d052c4"), "分装板": ("YB_6VialCarrier", "3a14196e-5dfe-6e21-0c79-fe2036d052c4"),
"样品瓶": ("BIOYOND_PolymerStation_Solid_Stock", "3a14196a-cf7d-8aea-48d8-b9662c7dba94"), "样品瓶": ("YB_Solid_Stock", "3a14196a-cf7d-8aea-48d8-b9662c7dba94"),
"90%分装小瓶": ("BIOYOND_PolymerStation_Solid_Vial", "3a14196c-cdcf-088d-dc7d-5cf38f0ad9ea"), "90%分装小瓶": ("YB_Solid_Vial", "3a14196c-cdcf-088d-dc7d-5cf38f0ad9ea"),
"10%分装小瓶": ("BIOYOND_PolymerStation_Liquid_Vial", "3a14196c-76be-2279-4e22-7310d69aed68"), "10%分装小瓶": ("YB_Liquid_Vial", "3a14196c-76be-2279-4e22-7310d69aed68"),
} }

14
test/resources/test_resourcetreeset.py
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@@ -13,13 +13,13 @@ lab_registry.setup()
type_mapping = { type_mapping = {
"烧杯": ("BIOYOND_PolymerStation_1FlaskCarrier", "3a14196b-24f2-ca49-9081-0cab8021bf1a"), "烧杯": ("YB_1FlaskCarrier", "3a14196b-24f2-ca49-9081-0cab8021bf1a"),
"试剂瓶": ("BIOYOND_PolymerStation_1BottleCarrier", ""), "试剂瓶": ("YB_1BottleCarrier", ""),
"样品板": ("BIOYOND_PolymerStation_6StockCarrier", "3a14196e-b7a0-a5da-1931-35f3000281e9"), "样品板": ("YB_6StockCarrier", "3a14196e-b7a0-a5da-1931-35f3000281e9"),
"分装板": ("BIOYOND_PolymerStation_6VialCarrier", "3a14196e-5dfe-6e21-0c79-fe2036d052c4"), "分装板": ("YB_6VialCarrier", "3a14196e-5dfe-6e21-0c79-fe2036d052c4"),
"样品瓶": ("BIOYOND_PolymerStation_Solid_Stock", "3a14196a-cf7d-8aea-48d8-b9662c7dba94"), "样品瓶": ("YB_Solid_Stock", "3a14196a-cf7d-8aea-48d8-b9662c7dba94"),
"90%分装小瓶": ("BIOYOND_PolymerStation_Solid_Vial", "3a14196c-cdcf-088d-dc7d-5cf38f0ad9ea"), "90%分装小瓶": ("YB_Solid_Vial", "3a14196c-cdcf-088d-dc7d-5cf38f0ad9ea"),
"10%分装小瓶": ("BIOYOND_PolymerStation_Liquid_Vial", "3a14196c-76be-2279-4e22-7310d69aed68"), "10%分装小瓶": ("YB_Liquid_Vial", "3a14196c-76be-2279-4e22-7310d69aed68"),
} }

31
unilabos/devices/workstation/bioyond_studio/config.py
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@@ -26,7 +26,6 @@ BIOYOND_FULL_CONFIG = {
"HTTP_host": os.getenv("BIOYOND_HTTP_HOST", "0.0.0.0"), # HTTP服务监听地址（0.0.0.0 表示监听所有网络接口） "HTTP_host": os.getenv("BIOYOND_HTTP_HOST", "0.0.0.0"), # HTTP服务监听地址（0.0.0.0 表示监听所有网络接口）
"HTTP_port": int(os.getenv("BIOYOND_HTTP_PORT", "8080")), "HTTP_port": int(os.getenv("BIOYOND_HTTP_PORT", "8080")),
"report_ip": os.getenv("BIOYOND_REPORT_IP", "172.21.32.172"), # 报送给 Bioyond 的本机IP地址（留空则自动检测） "report_ip": os.getenv("BIOYOND_REPORT_IP", "172.21.32.172"), # 报送给 Bioyond 的本机IP地址（留空则自动检测）
# 调试模式 # 调试模式
"debug_mode": os.getenv("BIOYOND_DEBUG_MODE", "False").lower() == "true", "debug_mode": os.getenv("BIOYOND_DEBUG_MODE", "False").lower() == "true",
} }
@@ -142,13 +141,29 @@ WAREHOUSE_MAPPING = {
# 物料类型配置 # 物料类型配置
MATERIAL_TYPE_MAPPINGS = { MATERIAL_TYPE_MAPPINGS = {
"烧杯": ("BIOYOND_PolymerStation_1FlaskCarrier", "3a14196b-24f2-ca49-9081-0cab8021bf1a"), "烧杯": ("YB_1FlaskCarrier", "3a14196b-24f2-ca49-9081-0cab8021bf1a"),
"试剂瓶": ("BIOYOND_PolymerStation_1BottleCarrier", ""), "试剂瓶": ("YB_1BottleCarrier", ""),
"样品板": ("BIOYOND_PolymerStation_6StockCarrier", "3a14196e-b7a0-a5da-1931-35f3000281e9"), "样品板": ("YB_6StockCarrier", "3a14196e-b7a0-a5da-1931-35f3000281e9"),
"分装板": ("BIOYOND_PolymerStation_6VialCarrier", "3a14196e-5dfe-6e21-0c79-fe2036d052c4"), "分装板": ("YB_6VialCarrier", "3a14196e-5dfe-6e21-0c79-fe2036d052c4"),
"样品瓶": ("BIOYOND_PolymerStation_Solid_Stock", "3a14196a-cf7d-8aea-48d8-b9662c7dba94"), "样品瓶": ("YB_Solid_Stock", "3a14196a-cf7d-8aea-48d8-b9662c7dba94"),
"90%分装小瓶": ("BIOYOND_PolymerStation_Solid_Vial", "3a14196c-cdcf-088d-dc7d-5cf38f0ad9ea"), "90%分装小瓶": ("YB_Solid_Vial", "3a14196c-cdcf-088d-dc7d-5cf38f0ad9ea"),
"10%分装小瓶": ("BIOYOND_PolymerStation_Liquid_Vial", "3a14196c-76be-2279-4e22-7310d69aed68"), "10%分装小瓶": ("YB_Liquid_Vial", "3a14196c-76be-2279-4e22-7310d69aed68"),
"20ml分液瓶": ("YB_20ml_Dispensing_Vial", "3a192c2b-19e8-f0a3-035e-041ca8ca1035"),
"100ml液体": ("YB_100ml_Liquid_Bottle", "d37166b3-ecaa-481e-bd84-3032b795ba07"),
"液": ("YB_Liquid_Bottle", "3a190ca1-2add-2b23-f8e1-bbd348b7f790"),
"高粘液": ("YB_High_Viscosity_Liquid_Bottle", "abe8df30-563d-43d2-85e0-cabec59ddc16"),
"加样头(大)": ("YB_Large_Dispense_Head", "3a190ca0-b2f6-9aeb-8067-547e72c11469"),
"5ml分液瓶板": ("YB_6x5ml_DispensingVialCarrier", "3a192fa4-007d-ec7b-456e-2a8be7a13f23"),
"5ml分液瓶": ("YB_5ml_Dispensing_Vial", "3a192c2a-ebb7-58a1-480d-8b3863bf74f4"),
"20ml分液瓶板": ("YB_6x20ml_DispensingVialCarrier", "3a192fa4-47db-3449-162a-eaf8aba57e27"),
"配液瓶(小)板": ("YB_6x_SmallSolutionBottleCarrier", "3a190c8b-3284-af78-d29f-9a69463ad047"),
"配液瓶(小)": ("YB_Small_Solution_Bottle", "3a190c8c-fe8f-bf48-0dc3-97afc7f508eb"),
"配液瓶(大)板": ("YB_4x_LargeSolutionBottleCarrier", "53e50377-32dc-4781-b3c0-5ce45bc7dc27"),
"配液瓶(大)": ("YB_Large_Solution_Bottle", "19c52ad1-51c5-494f-8854-576f4ca9c6ca"),
"加样头(大)板": ("YB_6x_LargeDispenseHeadCarrier", "a8e714ae-2a4e-4eb9-9614-e4c140ec3f16"),
"适配器块": ("YB_AdapterBlock", "efc3bb32-d504-4890-91c0-b64ed3ac80cf"),
"枪头盒": ("YB_TipBox", "3a192c2e-20f3-a44a-0334-c8301839d0b3"),
"枪头": ("YB_Pipette_Tip", "b6196971-1050-46da-9927-333e8dea062d"),
} }
# 步骤参数配置（各工作流的步骤UUID） # 步骤参数配置（各工作流的步骤UUID）

22
unilabos/registry/resources/bioyond/bottle_carriers.yaml
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@@ -2,7 +2,7 @@
category: category:
- bottle_carriers - bottle_carriers
class: class:
module: unilabos.resources.bioyond.bottle_carriers:BIOYOND_PolymerStation_1BottleCarrier module: unilabos.resources.bioyond.bottle_carriers:YB_1BottleCarrier
type: pylabrobot type: pylabrobot
description: 1BottleCarrier description: 1BottleCarrier
handles: [] handles: []
@@ -14,7 +14,7 @@
category: category:
- bottle_carriers - bottle_carriers
class: class:
module: unilabos.resources.bioyond.bottle_carriers:BIOYOND_PolymerStation_1FlaskCarrier module: unilabos.resources.bioyond.bottle_carriers:YB_1FlaskCarrier
type: pylabrobot type: pylabrobot
description: 1FlaskCarrier description: 1FlaskCarrier
handles: [] handles: []
@@ -26,7 +26,7 @@
category: category:
- bottle_carriers - bottle_carriers
class: class:
module: unilabos.resources.bioyond.bottle_carriers:BIOYOND_PolymerStation_6StockCarrier module: unilabos.resources.bioyond.bottle_carriers:YB_6StockCarrier
type: pylabrobot type: pylabrobot
description: 6StockCarrier description: 6StockCarrier
handles: [] handles: []
@@ -38,7 +38,7 @@
category: category:
- bottle_carriers - bottle_carriers
class: class:
module: unilabos.resources.bioyond.bottle_carriers:BIOYOND_PolymerStation_6VialCarrier module: unilabos.resources.bioyond.bottle_carriers:YB_6VialCarrier
type: pylabrobot type: pylabrobot
description: 6VialCarrier description: 6VialCarrier
handles: [] handles: []
@@ -50,7 +50,7 @@
category: category:
- yb3 - yb3
class: class:
module: unilabos.resources.bioyond.bottle_carriers:BIOYOND_PolymerStation_6x5ml_DispensingVialCarrier module: unilabos.resources.bioyond.bottle_carriers:YB_6x5ml_DispensingVialCarrier
type: pylabrobot type: pylabrobot
description: 6x5ml_DispensingVialCarrier description: 6x5ml_DispensingVialCarrier
handles: [] handles: []
@@ -62,7 +62,7 @@
category: category:
- yb3 - yb3
class: class:
module: unilabos.resources.bioyond.bottle_carriers:BIOYOND_PolymerStation_6x20ml_DispensingVialCarrier module: unilabos.resources.bioyond.bottle_carriers:YB_6x20ml_DispensingVialCarrier
type: pylabrobot type: pylabrobot
description: 6x20ml_DispensingVialCarrier description: 6x20ml_DispensingVialCarrier
handles: [] handles: []
@@ -74,7 +74,7 @@
category: category:
- yb3 - yb3
class: class:
module: unilabos.resources.bioyond.bottle_carriers:BIOYOND_PolymerStation_6x_SmallSolutionBottleCarrier module: unilabos.resources.bioyond.bottle_carriers:YB_6x_SmallSolutionBottleCarrier
type: pylabrobot type: pylabrobot
description: 6x_SmallSolutionBottleCarrier description: 6x_SmallSolutionBottleCarrier
handles: [] handles: []
@@ -86,7 +86,7 @@
category: category:
- yb3 - yb3
class: class:
module: unilabos.resources.bioyond.bottle_carriers:BIOYOND_PolymerStation_4x_LargeSolutionBottleCarrier module: unilabos.resources.bioyond.bottle_carriers:YB_4x_LargeSolutionBottleCarrier
type: pylabrobot type: pylabrobot
description: 4x_LargeSolutionBottleCarrier description: 4x_LargeSolutionBottleCarrier
handles: [] handles: []
@@ -98,7 +98,7 @@
category: category:
- yb3 - yb3
class: class:
module: unilabos.resources.bioyond.bottle_carriers:BIOYOND_PolymerStation_6x_LargeDispenseHeadCarrier module: unilabos.resources.bioyond.bottle_carriers:YB_6x_LargeDispenseHeadCarrier
type: pylabrobot type: pylabrobot
description: 6x_LargeDispenseHeadCarrier description: 6x_LargeDispenseHeadCarrier
handles: [] handles: []
@@ -110,7 +110,7 @@ AdapterBlock:
category: category:
- yb3 - yb3
class: class:
module: unilabos.resources.bioyond.bottle_carriers:BIOYOND_PolymerStation_AdapterBlock module: unilabos.resources.bioyond.bottle_carriers:YB_AdapterBlock
type: pylabrobot type: pylabrobot
description: AdapterBlock description: AdapterBlock
handles: [] handles: []
@@ -122,7 +122,7 @@ TipBox:
category: category:
- yb3 - yb3
class: class:
module: unilabos.resources.bioyond.bottle_carriers:BIOYOND_PolymerStation_TipBox module: unilabos.resources.bioyond.bottle_carriers:YB_TipBox
type: pylabrobot type: pylabrobot
description: TipBox description: TipBox
handles: [] handles: []

169
unilabos/registry/resources/bioyond/bottles.yaml
View File

@@ -2,7 +2,7 @@ Liquid_Vial:
category: category:
- bottles - bottles
class: class:
module: unilabos.resources.bioyond.bottles:BIOYOND_PolymerStation_Liquid_Vial module: unilabos.resources.bioyond.bottles:YB_Liquid_Vial
type: pylabrobot type: pylabrobot
handles: [] handles: []
icon: '' icon: ''
@@ -12,7 +12,7 @@ Reagent_Bottle:
category: category:
- bottles - bottles
class: class:
module: unilabos.resources.bioyond.bottles:BIOYOND_PolymerStation_Reagent_Bottle module: unilabos.resources.bioyond.bottles:YB_Reagent_Bottle
type: pylabrobot type: pylabrobot
handles: [] handles: []
icon: '' icon: ''
@@ -22,7 +22,7 @@ Solid_Stock:
category: category:
- bottles - bottles
class: class:
module: unilabos.resources.bioyond.bottles:BIOYOND_PolymerStation_Solid_Stock module: unilabos.resources.bioyond.bottles:YB_Solid_Stock
type: pylabrobot type: pylabrobot
handles: [] handles: []
icon: '' icon: ''
@@ -32,7 +32,7 @@ Solid_Vial:
category: category:
- bottles - bottles
class: class:
module: unilabos.resources.bioyond.bottles:BIOYOND_PolymerStation_Solid_Vial module: unilabos.resources.bioyond.bottles:YB_Solid_Vial
type: pylabrobot type: pylabrobot
handles: [] handles: []
icon: '' icon: ''
@@ -42,7 +42,7 @@ Solution_Beaker:
category: category:
- bottles - bottles
class: class:
module: unilabos.resources.bioyond.bottles:BIOYOND_PolymerStation_Solution_Beaker module: unilabos.resources.bioyond.bottles:YB_Solution_Beaker
type: pylabrobot type: pylabrobot
handles: [] handles: []
icon: '' icon: ''
@@ -52,7 +52,7 @@ Solution_Beaker:
category: category:
- yb3 - yb3
class: class:
module: unilabos.resources.bioyond.bottles:BIOYOND_PolymerStation_100ml_Liquid_Bottle module: unilabos.resources.bioyond.bottles:YB_100ml_Liquid_Bottle
type: pylabrobot type: pylabrobot
handles: [] handles: []
icon: '' icon: ''
@@ -62,7 +62,7 @@ Liquid_Bottle:
category: category:
- yb3 - yb3
class: class:
module: unilabos.resources.bioyond.bottles:BIOYOND_PolymerStation_Liquid_Bottle module: unilabos.resources.bioyond.bottles:YB_Liquid_Bottle
type: pylabrobot type: pylabrobot
handles: [] handles: []
icon: '' icon: ''
@@ -72,7 +72,7 @@ High_Viscosity_Liquid_Bottle:
category: category:
- yb3 - yb3
class: class:
module: unilabos.resources.bioyond.bottles:BIOYOND_PolymerStation_High_Viscosity_Liquid_Bottle module: unilabos.resources.bioyond.bottles:YB_High_Viscosity_Liquid_Bottle
type: pylabrobot type: pylabrobot
handles: [] handles: []
icon: '' icon: ''
@@ -82,7 +82,7 @@ Large_Dispense_Head:
category: category:
- yb3 - yb3
class: class:
module: unilabos.resources.bioyond.bottles:BIOYOND_PolymerStation_Large_Dispense_Head module: unilabos.resources.bioyond.bottles:YB_Large_Dispense_Head
type: pylabrobot type: pylabrobot
handles: [] handles: []
icon: '' icon: ''
@@ -92,7 +92,7 @@ Large_Dispense_Head:
category: category:
- yb3 - yb3
class: class:
module: unilabos.resources.bioyond.bottles:BIOYOND_PolymerStation_5ml_Dispensing_Vial module: unilabos.resources.bioyond.bottles:YB_5ml_Dispensing_Vial
type: pylabrobot type: pylabrobot
handles: [] handles: []
icon: '' icon: ''
@@ -102,7 +102,7 @@ Large_Dispense_Head:
category: category:
- yb3 - yb3
class: class:
module: unilabos.resources.bioyond.bottles:BIOYOND_PolymerStation_20ml_Dispensing_Vial module: unilabos.resources.bioyond.bottles:YB_20ml_Dispensing_Vial
type: pylabrobot type: pylabrobot
handles: [] handles: []
icon: '' icon: ''
@@ -112,7 +112,7 @@ Small_Solution_Bottle:
category: category:
- yb3 - yb3
class: class:
module: unilabos.resources.bioyond.bottles:BIOYOND_PolymerStation_Small_Solution_Bottle module: unilabos.resources.bioyond.bottles:YB_Small_Solution_Bottle
type: pylabrobot type: pylabrobot
handles: [] handles: []
icon: '' icon: ''
@@ -122,7 +122,7 @@ Large_Solution_Bottle:
category: category:
- yb3 - yb3
class: class:
module: unilabos.resources.bioyond.bottles:BIOYOND_PolymerStation_Large_Solution_Bottle module: unilabos.resources.bioyond.bottles:YB_Large_Solution_Bottle
type: pylabrobot type: pylabrobot
handles: [] handles: []
icon: '' icon: ''
@@ -132,7 +132,148 @@ Pipette_Tip:
category: category:
- yb3 - yb3
class: class:
module: unilabos.resources.bioyond.bottles:BIOYOND_PolymerStation_Pipette_Tip module: unilabos.resources.bioyond.bottles:YB_Pipette_Tip
type: pylabrobot
handles: []
icon: ''
init_param_schema: {}
version: 1.0.0
YB_Liquid_Vial:
category:
- bottles
class:
module: unilabos.resources.bioyond.bottles:YB_Liquid_Vial
type: pylabrobot
handles: []
icon: ''
init_param_schema: {}
version: 1.0.0
YB_Reagent_Bottle:
category:
- bottles
class:
module: unilabos.resources.bioyond.bottles:YB_Reagent_Bottle
type: pylabrobot
handles: []
icon: ''
init_param_schema: {}
version: 1.0.0
YB_Solid_Stock:
category:
- bottles
class:
module: unilabos.resources.bioyond.bottles:YB_Solid_Stock
type: pylabrobot
handles: []
icon: ''
init_param_schema: {}
version: 1.0.0
YB_Solid_Vial:
category:
- bottles
class:
module: unilabos.resources.bioyond.bottles:YB_Solid_Vial
type: pylabrobot
handles: []
icon: ''
init_param_schema: {}
version: 1.0.0
YB_Solution_Beaker:
category:
- bottles
class:
module: unilabos.resources.bioyond.bottles:YB_Solution_Beaker
type: pylabrobot
handles: []
icon: ''
init_param_schema: {}
version: 1.0.0
YB_100ml_Liquid_Bottle:
category:
- yb3
class:
module: unilabos.resources.bioyond.bottles:YB_100ml_Liquid_Bottle
type: pylabrobot
handles: []
icon: ''
init_param_schema: {}
version: 1.0.0
YB_Liquid_Bottle:
category:
- yb3
class:
module: unilabos.resources.bioyond.bottles:YB_Liquid_Bottle
type: pylabrobot
handles: []
icon: ''
init_param_schema: {}
version: 1.0.0
YB_High_Viscosity_Liquid_Bottle:
category:
- yb3
class:
module: unilabos.resources.bioyond.bottles:YB_High_Viscosity_Liquid_Bottle
type: pylabrobot
handles: []
icon: ''
init_param_schema: {}
version: 1.0.0
YB_Large_Dispense_Head:
category:
- yb3
class:
module: unilabos.resources.bioyond.bottles:YB_Large_Dispense_Head
type: pylabrobot
handles: []
icon: ''
init_param_schema: {}
version: 1.0.0
YB_5ml_Dispensing_Vial:
category:
- yb3
class:
module: unilabos.resources.bioyond.bottles:YB_5ml_Dispensing_Vial
type: pylabrobot
handles: []
icon: ''
init_param_schema: {}
version: 1.0.0
YB_20ml_Dispensing_Vial:
category:
- yb3
class:
module: unilabos.resources.bioyond.bottles:YB_20ml_Dispensing_Vial
type: pylabrobot
handles: []
icon: ''
init_param_schema: {}
version: 1.0.0
YB_Small_Solution_Bottle:
category:
- yb3
class:
module: unilabos.resources.bioyond.bottles:YB_Small_Solution_Bottle
type: pylabrobot
handles: []
icon: ''
init_param_schema: {}
version: 1.0.0
YB_Large_Solution_Bottle:
category:
- yb3
class:
module: unilabos.resources.bioyond.bottles:YB_Large_Solution_Bottle
type: pylabrobot
handles: []
icon: ''
init_param_schema: {}
version: 1.0.0
YB_Pipette_Tip:
category:
- yb3
class:
module: unilabos.resources.bioyond.bottles:YB_Pipette_Tip
type: pylabrobot type: pylabrobot
handles: [] handles: []
icon: '' icon: ''

70
unilabos/resources/bioyond/bottle_carriers.py
View File

@@ -2,17 +2,17 @@ from pylabrobot.resources import create_homogeneous_resources, Coordinate, Resou
from unilabos.resources.itemized_carrier import Bottle, BottleCarrier from unilabos.resources.itemized_carrier import Bottle, BottleCarrier
from unilabos.resources.bioyond.bottles import ( from unilabos.resources.bioyond.bottles import (
BIOYOND_PolymerStation_Solid_Stock, YB_Solid_Stock,
BIOYOND_PolymerStation_Solid_Vial, YB_Solid_Vial,
BIOYOND_PolymerStation_Liquid_Vial, YB_Liquid_Vial,
BIOYOND_PolymerStation_Solution_Beaker, YB_Solution_Beaker,
BIOYOND_PolymerStation_Reagent_Bottle, YB_Reagent_Bottle,
BIOYOND_PolymerStation_5ml_Dispensing_Vial, YB_5ml_Dispensing_Vial,
BIOYOND_PolymerStation_20ml_Dispensing_Vial, YB_20ml_Dispensing_Vial,
BIOYOND_PolymerStation_Small_Solution_Bottle, YB_Small_Solution_Bottle,
BIOYOND_PolymerStation_Large_Solution_Bottle, YB_Large_Solution_Bottle,
BIOYOND_PolymerStation_Large_Dispense_Head, YB_Large_Dispense_Head,
BIOYOND_PolymerStation_Pipette_Tip YB_Pipette_Tip
) )
# 命名约定：试剂瓶-Bottle，烧杯-Beaker，烧瓶-Flask，小瓶-Vial # 命名约定：试剂瓶-Bottle，烧杯-Beaker，烧瓶-Flask，小瓶-Vial
@@ -63,7 +63,7 @@ def BIOYOND_Electrolyte_6VialCarrier(name: str) -> BottleCarrier:
carrier.num_items_y = 2 carrier.num_items_y = 2
carrier.num_items_z = 1 carrier.num_items_z = 1
for i in range(6): for i in range(6):
carrier[i] = BIOYOND_PolymerStation_Solid_Vial(f"{name}_vial_{i+1}") carrier[i] = YB_Solid_Vial(f"{name}_vial_{i+1}")
return carrier return carrier
@@ -100,11 +100,11 @@ def BIOYOND_Electrolyte_1BottleCarrier(name: str) -> BottleCarrier:
carrier.num_items_x = 1 carrier.num_items_x = 1
carrier.num_items_y = 1 carrier.num_items_y = 1
carrier.num_items_z = 1 carrier.num_items_z = 1
carrier[0] = BIOYOND_PolymerStation_Solution_Beaker(f"{name}_beaker_1") carrier[0] = YB_Solution_Beaker(f"{name}_beaker_1")
return carrier return carrier
def BIOYOND_PolymerStation_6StockCarrier(name: str) -> BottleCarrier: def YB_6StockCarrier(name: str) -> BottleCarrier:
"""6瓶载架 - 2x3布局""" """6瓶载架 - 2x3布局"""
# 载架尺寸 (mm) # 载架尺寸 (mm)
@@ -151,11 +151,11 @@ def BIOYOND_PolymerStation_6StockCarrier(name: str) -> BottleCarrier:
carrier.num_items_z = 1 carrier.num_items_z = 1
ordering = ["A1", "A2", "A3", "B1", "B2", "B3"] # 自定义顺序 ordering = ["A1", "A2", "A3", "B1", "B2", "B3"] # 自定义顺序
for i in range(6): for i in range(6):
carrier[i] = BIOYOND_PolymerStation_Solid_Stock(f"{name}_vial_{ordering[i]}") carrier[i] = YB_Solid_Stock(f"{name}_vial_{ordering[i]}")
return carrier return carrier
def BIOYOND_PolymerStation_6VialCarrier(name: str) -> BottleCarrier: def YB_6VialCarrier(name: str) -> BottleCarrier:
"""6瓶载架 - 2x3布局""" """6瓶载架 - 2x3布局"""
# 载架尺寸 (mm) # 载架尺寸 (mm)
@@ -202,13 +202,13 @@ def BIOYOND_PolymerStation_6VialCarrier(name: str) -> BottleCarrier:
carrier.num_items_z = 1 carrier.num_items_z = 1
ordering = ["A1", "A2", "A3", "B1", "B2", "B3"] # 自定义顺序 ordering = ["A1", "A2", "A3", "B1", "B2", "B3"] # 自定义顺序
for i in range(3): for i in range(3):
carrier[i] = BIOYOND_PolymerStation_Solid_Vial(f"{name}_solidvial_{ordering[i]}") carrier[i] = YB_Solid_Vial(f"{name}_solidvial_{ordering[i]}")
for i in range(3, 6): for i in range(3, 6):
carrier[i] = BIOYOND_PolymerStation_Liquid_Vial(f"{name}_liquidvial_{ordering[i]}") carrier[i] = YB_Liquid_Vial(f"{name}_liquidvial_{ordering[i]}")
return carrier return carrier
def BIOYOND_PolymerStation_1BottleCarrier(name: str) -> BottleCarrier: def YB_1BottleCarrier(name: str) -> BottleCarrier:
"""1瓶载架 - 单个中央位置""" """1瓶载架 - 单个中央位置"""
# 载架尺寸 (mm) # 载架尺寸 (mm)
@@ -241,11 +241,11 @@ def BIOYOND_PolymerStation_1BottleCarrier(name: str) -> BottleCarrier:
carrier.num_items_x = 1 carrier.num_items_x = 1
carrier.num_items_y = 1 carrier.num_items_y = 1
carrier.num_items_z = 1 carrier.num_items_z = 1
carrier[0] = BIOYOND_PolymerStation_Reagent_Bottle(f"{name}_flask_1") carrier[0] = YB_Reagent_Bottle(f"{name}_flask_1")
return carrier return carrier
def BIOYOND_PolymerStation_1FlaskCarrier(name: str) -> BottleCarrier: def YB_1FlaskCarrier(name: str) -> BottleCarrier:
"""1瓶载架 - 单个中央位置""" """1瓶载架 - 单个中央位置"""
# 载架尺寸 (mm) # 载架尺寸 (mm)
@@ -278,11 +278,11 @@ def BIOYOND_PolymerStation_1FlaskCarrier(name: str) -> BottleCarrier:
carrier.num_items_x = 1 carrier.num_items_x = 1
carrier.num_items_y = 1 carrier.num_items_y = 1
carrier.num_items_z = 1 carrier.num_items_z = 1
carrier[0] = BIOYOND_PolymerStation_Reagent_Bottle(f"{name}_bottle_1") carrier[0] = YB_Reagent_Bottle(f"{name}_bottle_1")
return carrier return carrier
def BIOYOND_PolymerStation_6x5ml_DispensingVialCarrier(name: str) -> BottleCarrier: def YB_6x5ml_DispensingVialCarrier(name: str) -> BottleCarrier:
"""5ml分液瓶板 - 4x2布局，8个位置""" """5ml分液瓶板 - 4x2布局，8个位置"""
# 载架尺寸 (mm) # 载架尺寸 (mm)
@@ -328,11 +328,11 @@ def BIOYOND_PolymerStation_6x5ml_DispensingVialCarrier(name: str) -> BottleCarri
carrier.num_items_z = 1 carrier.num_items_z = 1
ordering = ["A1", "A2", "A3", "A4", "B1", "B2", "B3", "B4"] ordering = ["A1", "A2", "A3", "A4", "B1", "B2", "B3", "B4"]
for i in range(8): for i in range(8):
carrier[i] = BIOYOND_PolymerStation_5ml_Dispensing_Vial(f"{name}_vial_{ordering[i]}") carrier[i] = YB_5ml_Dispensing_Vial(f"{name}_vial_{ordering[i]}")
return carrier return carrier
def BIOYOND_PolymerStation_6x20ml_DispensingVialCarrier(name: str) -> BottleCarrier: def YB_6x20ml_DispensingVialCarrier(name: str) -> BottleCarrier:
"""20ml分液瓶板 - 4x2布局，8个位置""" """20ml分液瓶板 - 4x2布局，8个位置"""
# 载架尺寸 (mm) # 载架尺寸 (mm)
@@ -378,11 +378,11 @@ def BIOYOND_PolymerStation_6x20ml_DispensingVialCarrier(name: str) -> BottleCarr
carrier.num_items_z = 1 carrier.num_items_z = 1
ordering = ["A1", "A2", "A3", "A4", "B1", "B2", "B3", "B4"] ordering = ["A1", "A2", "A3", "A4", "B1", "B2", "B3", "B4"]
for i in range(8): for i in range(8):
carrier[i] = BIOYOND_PolymerStation_20ml_Dispensing_Vial(f"{name}_vial_{ordering[i]}") carrier[i] = YB_20ml_Dispensing_Vial(f"{name}_vial_{ordering[i]}")
return carrier return carrier
def BIOYOND_PolymerStation_6x_SmallSolutionBottleCarrier(name: str) -> BottleCarrier: def YB_6x_SmallSolutionBottleCarrier(name: str) -> BottleCarrier:
"""配液瓶(小)板 - 4x2布局，8个位置""" """配液瓶(小)板 - 4x2布局，8个位置"""
# 载架尺寸 (mm) # 载架尺寸 (mm)
@@ -428,11 +428,11 @@ def BIOYOND_PolymerStation_6x_SmallSolutionBottleCarrier(name: str) -> BottleCar
carrier.num_items_z = 1 carrier.num_items_z = 1
ordering = ["A1", "A2", "A3", "A4", "B1", "B2", "B3", "B4"] ordering = ["A1", "A2", "A3", "A4", "B1", "B2", "B3", "B4"]
for i in range(8): for i in range(8):
carrier[i] = BIOYOND_PolymerStation_Small_Solution_Bottle(f"{name}_bottle_{ordering[i]}") carrier[i] = YB_Small_Solution_Bottle(f"{name}_bottle_{ordering[i]}")
return carrier return carrier
def BIOYOND_PolymerStation_4x_LargeSolutionBottleCarrier(name: str) -> BottleCarrier: def YB_4x_LargeSolutionBottleCarrier(name: str) -> BottleCarrier:
"""配液瓶(大)板 - 2x2布局，4个位置""" """配液瓶(大)板 - 2x2布局，4个位置"""
# 载架尺寸 (mm) # 载架尺寸 (mm)
@@ -478,11 +478,11 @@ def BIOYOND_PolymerStation_4x_LargeSolutionBottleCarrier(name: str) -> BottleCar
carrier.num_items_z = 1 carrier.num_items_z = 1
ordering = ["A1", "A2", "B1", "B2"] ordering = ["A1", "A2", "B1", "B2"]
for i in range(4): for i in range(4):
carrier[i] = BIOYOND_PolymerStation_Large_Solution_Bottle(f"{name}_bottle_{ordering[i]}") carrier[i] = YB_Large_Solution_Bottle(f"{name}_bottle_{ordering[i]}")
return carrier return carrier
def BIOYOND_PolymerStation_6x_LargeDispenseHeadCarrier(name: str) -> BottleCarrier: def YB_6x_LargeDispenseHeadCarrier(name: str) -> BottleCarrier:
"""加样头(大)板 - 1x1布局，1个位置""" """加样头(大)板 - 1x1布局，1个位置"""
# 载架尺寸 (mm) # 载架尺寸 (mm)
@@ -526,11 +526,11 @@ def BIOYOND_PolymerStation_6x_LargeDispenseHeadCarrier(name: str) -> BottleCarri
carrier.num_items_x = 1 carrier.num_items_x = 1
carrier.num_items_y = 1 carrier.num_items_y = 1
carrier.num_items_z = 1 carrier.num_items_z = 1
carrier[0] = BIOYOND_PolymerStation_Large_Dispense_Head(f"{name}_head_1") carrier[0] = YB_Large_Dispense_Head(f"{name}_head_1")
return carrier return carrier
def BIOYOND_PolymerStation_AdapterBlock(name: str) -> BottleCarrier: def YB_AdapterBlock(name: str) -> BottleCarrier:
"""适配器块 - 单个中央位置""" """适配器块 - 单个中央位置"""
# 载架尺寸 (mm) # 载架尺寸 (mm)
@@ -567,7 +567,7 @@ def BIOYOND_PolymerStation_AdapterBlock(name: str) -> BottleCarrier:
return carrier return carrier
def BIOYOND_PolymerStation_TipBox(name: str) -> BottleCarrier: def YB_TipBox(name: str) -> BottleCarrier:
"""枪头盒 - 8x12布局，96个位置""" """枪头盒 - 8x12布局，96个位置"""
# 载架尺寸 (mm) # 载架尺寸 (mm)
@@ -615,6 +615,6 @@ def BIOYOND_PolymerStation_TipBox(name: str) -> BottleCarrier:
for i in range(96): for i in range(96):
row = chr(65 + i // 12) # A-H row = chr(65 + i // 12) # A-H
col = (i % 12) + 1 # 1-12 col = (i % 12) + 1 # 1-12
carrier[i] = BIOYOND_PolymerStation_Pipette_Tip(f"{name}_tip_{row}{col}") carrier[i] = YB_Pipette_Tip(f"{name}_tip_{row}{col}")
return carrier return carrier

28
unilabos/resources/bioyond/bottles.py
View File

@@ -2,7 +2,7 @@ from unilabos.resources.itemized_carrier import Bottle, BottleCarrier
# 工厂函数 # 工厂函数
def BIOYOND_PolymerStation_Solid_Stock( def YB_Solid_Stock(
name: str, name: str,
diameter: float = 20.0, diameter: float = 20.0,
height: float = 100.0, height: float = 100.0,
@@ -20,7 +20,7 @@ def BIOYOND_PolymerStation_Solid_Stock(
) )
def BIOYOND_PolymerStation_Solid_Vial( def YB_Solid_Vial(
name: str, name: str,
diameter: float = 25.0, diameter: float = 25.0,
height: float = 60.0, height: float = 60.0,
@@ -38,7 +38,7 @@ def BIOYOND_PolymerStation_Solid_Vial(
) )
def BIOYOND_PolymerStation_Liquid_Vial( def YB_Liquid_Vial(
name: str, name: str,
diameter: float = 25.0, diameter: float = 25.0,
height: float = 60.0, height: float = 60.0,
@@ -56,7 +56,7 @@ def BIOYOND_PolymerStation_Liquid_Vial(
) )
def BIOYOND_PolymerStation_Solution_Beaker( def YB_Solution_Beaker(
name: str, name: str,
diameter: float = 60.0, diameter: float = 60.0,
height: float = 70.0, height: float = 70.0,
@@ -74,7 +74,7 @@ def BIOYOND_PolymerStation_Solution_Beaker(
) )
def BIOYOND_PolymerStation_Reagent_Bottle( def YB_Reagent_Bottle(
name: str, name: str,
diameter: float = 70.0, diameter: float = 70.0,
height: float = 120.0, height: float = 120.0,
@@ -92,7 +92,7 @@ def BIOYOND_PolymerStation_Reagent_Bottle(
) )
def BIOYOND_PolymerStation_100ml_Liquid_Bottle( def YB_100ml_Liquid_Bottle(
name: str, name: str,
diameter: float = 50.0, diameter: float = 50.0,
height: float = 80.0, height: float = 80.0,
@@ -110,7 +110,7 @@ def BIOYOND_PolymerStation_100ml_Liquid_Bottle(
) )
def BIOYOND_PolymerStation_Liquid_Bottle( def YB_Liquid_Bottle(
name: str, name: str,
diameter: float = 40.0, diameter: float = 40.0,
height: float = 70.0, height: float = 70.0,
@@ -128,7 +128,7 @@ def BIOYOND_PolymerStation_Liquid_Bottle(
) )
def BIOYOND_PolymerStation_High_Viscosity_Liquid_Bottle( def YB_High_Viscosity_Liquid_Bottle(
name: str, name: str,
diameter: float = 45.0, diameter: float = 45.0,
height: float = 75.0, height: float = 75.0,
@@ -146,7 +146,7 @@ def BIOYOND_PolymerStation_High_Viscosity_Liquid_Bottle(
) )
def BIOYOND_PolymerStation_Large_Dispense_Head( def YB_Large_Dispense_Head(
name: str, name: str,
diameter: float = 35.0, diameter: float = 35.0,
height: float = 90.0, height: float = 90.0,
@@ -164,7 +164,7 @@ def BIOYOND_PolymerStation_Large_Dispense_Head(
) )
def BIOYOND_PolymerStation_5ml_Dispensing_Vial( def YB_5ml_Dispensing_Vial(
name: str, name: str,
diameter: float = 15.0, diameter: float = 15.0,
height: float = 45.0, height: float = 45.0,
@@ -182,7 +182,7 @@ def BIOYOND_PolymerStation_5ml_Dispensing_Vial(
) )
def BIOYOND_PolymerStation_20ml_Dispensing_Vial( def YB_20ml_Dispensing_Vial(
name: str, name: str,
diameter: float = 20.0, diameter: float = 20.0,
height: float = 65.0, height: float = 65.0,
@@ -200,7 +200,7 @@ def BIOYOND_PolymerStation_20ml_Dispensing_Vial(
) )
def BIOYOND_PolymerStation_Small_Solution_Bottle( def YB_Small_Solution_Bottle(
name: str, name: str,
diameter: float = 35.0, diameter: float = 35.0,
height: float = 60.0, height: float = 60.0,
@@ -218,7 +218,7 @@ def BIOYOND_PolymerStation_Small_Solution_Bottle(
) )
def BIOYOND_PolymerStation_Large_Solution_Bottle( def YB_Large_Solution_Bottle(
name: str, name: str,
diameter: float = 55.0, diameter: float = 55.0,
height: float = 90.0, height: float = 90.0,
@@ -236,7 +236,7 @@ def BIOYOND_PolymerStation_Large_Solution_Bottle(
) )
def BIOYOND_PolymerStation_Pipette_Tip( def YB_Pipette_Tip(
name: str, name: str,
diameter: float = 10.0, diameter: float = 10.0,
height: float = 50.0, height: float = 50.0,