mirror of
https://github.com/dptech-corp/Uni-Lab-OS.git
synced 2025-12-17 04:51:10 +00:00
1103byxinyu
This commit is contained in:
@@ -3,34 +3,64 @@
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{
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"id": "bioyond_cell_workstation",
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"name": "配液分液工站",
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"children": [
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],
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"parent": null,
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"children": [
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"YB_Bioyond_Deck"
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],
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"type": "device",
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"class": "bioyond_cell",
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"config": {
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"protocol_type": [],
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"station_resource": {}
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"deck": {
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"data": {
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"_resource_child_name": "YB_Bioyond_Deck",
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"_resource_type": "unilabos.resources.bioyond.decks:BIOYOND_YB_Deck"
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}
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},
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"protocol_type": []
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},
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"data": {}
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},
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{
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},
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{
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"id": "YB_Bioyond_Deck",
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"name": "YB_Bioyond_Deck",
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"children": [],
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"parent": "bioyond_cell_workstation",
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"type": "deck",
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"class": "BIOYOND_YB_Deck",
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"position": {
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"x": 0,
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"y": 0,
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"z": 0
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},
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"config": {
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"type": "BIOYOND_YB_Deck",
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"setup": true,
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"rotation": {
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"x": 0,
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"y": 0,
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"z": 0,
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"type": "Rotation"
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}
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},
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"data": {}
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},
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{
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"id": "BatteryStation",
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"name": "扣电工作站",
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"children": [
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"coin_cell_deck"
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"coin_cell_deck"
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],
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"parent": null,
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"type": "device",
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"class": "coincellassemblyworkstation_device",
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"position": {
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"x": 600,
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"y": 400,
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"z": 0
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"x": 600,
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"y": 400,
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"z": 0
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},
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"config": {
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"debug_mode": false,
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"protocol_type": []
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"debug_mode": false,
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"protocol_type": []
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}
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}
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],
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@@ -11,7 +11,6 @@ import re
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import threading
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import json
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from urllib3 import response
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from unilabos.devices.workstation.workstation_base import WorkstationBase
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from unilabos.devices.workstation.bioyond_studio.station import BioyondWorkstation, BioyondResourceSynchronizer
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from unilabos.devices.workstation.bioyond_studio.config import (
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API_CONFIG, MATERIAL_TYPE_MAPPINGS, WAREHOUSE_MAPPING, SOLID_LIQUID_MAPPINGS
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@@ -19,7 +18,6 @@ from unilabos.devices.workstation.bioyond_studio.config import (
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from unilabos.devices.workstation.workstation_http_service import WorkstationHTTPService
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from unilabos.utils.log import logger
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from unilabos.registry.registry import lab_registry
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from unilabos.resources.bioyond.decks import YB_Deck, BIOYOND_YB_Deck
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def _iso_local_now_ms() -> str:
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# 文档要求:到毫秒 + Z,例如 2025-08-15T05:43:22.814Z
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@@ -36,29 +34,25 @@ class BioyondCellWorkstation(BioyondWorkstation):
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查询实验(2.5/2.6) → 3-2-1 转运(2.32) → 样品/废料取出(2.28)
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"""
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def __init__(
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self,
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bioyond_config: Optional[Dict[str, Any]] = None,
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deck: Optional[Dict[str, Any]] = None,
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*args, **kwargs,
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):
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def __init__(self, config: dict = None, deck=None, protocol_type=None, **kwargs):
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# 使用统一配置,支持自定义覆盖, 从 config.py 加载完整配置
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self.bioyond_config = bioyond_config or {
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self.bioyond_config ={
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**API_CONFIG,
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"material_type_mappings": MATERIAL_TYPE_MAPPINGS,
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"warehouse_mapping": WAREHOUSE_MAPPING
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"warehouse_mapping": WAREHOUSE_MAPPING,
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"debug_mode": False
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}
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# "material_type_mappings": MATERIAL_TYPE_MAPPINGS
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# "warehouse_mapping": WAREHOUSE_MAPPING
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self.deck = BIOYOND_YB_Deck()
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self.deck.setup()
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print(self.bioyond_config)
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if deck is None and config:
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deck = config.get('deck')
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# print(self.bioyond_config)
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self.debug_mode = self.bioyond_config["debug_mode"]
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self.http_service_started = self.debug_mode
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self.device_id = kwargs.pop("device_id", "bioyond_cell_workstation")
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super().__init__(bioyond_config=self.bioyond_config, deck=self.deck)
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self._device_id = "bioyond_cell_workstation" # 默认值,后续会从_ros_node获取
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super().__init__(bioyond_config=config, deck=deck)
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self.update_push_ip() #直接修改奔耀端的报送ip地址
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logger.info("已更新奔耀端推送 IP 地址")
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@@ -72,6 +66,13 @@ class BioyondCellWorkstation(BioyondWorkstation):
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self.last_order_code = None
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logger.info(f"Bioyond工作站初始化完成 (debug_mode={self.debug_mode})")
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@property
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def device_id(self):
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"""获取设备ID,优先从_ros_node获取,否则返回默认值"""
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if hasattr(self, '_ros_node') and self._ros_node is not None:
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return getattr(self._ros_node, 'device_id', self._device_id)
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return self._device_id
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def _start_http_service(self):
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"""启动 HTTP 服务"""
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host = self.bioyond_config.get("HTTP_host", "")
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@@ -1,715 +0,0 @@
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# -*- coding: utf-8 -*-
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from typing import Dict, Any, List, Optional
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from datetime import datetime, timezone
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import requests
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from pathlib import Path
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import pandas as pd
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import time
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from datetime import datetime, timezone, timedelta
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import re
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import threading
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from unilabos.devices.workstation.workstation_base import WorkstationBase
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from unilabos.devices.workstation.workstation_http_service import WorkstationHTTPService
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from unilabos.utils.log import logger
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from pylabrobot.resources.deck import Deck
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def _iso_utc_now_ms() -> str:
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# 文档要求:到毫秒 + Z,例如 2025-08-15T05:43:22.814Z
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dt = datetime.now(timezone.utc)
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return dt.strftime("%Y-%m-%dT%H:%M:%S.") + f"{int(dt.microsecond/1000):03d}Z"
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class BioyondWorkstation(WorkstationBase):
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"""
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集成 Bioyond LIMS 的工作站示例,
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覆盖:入库(2.17/2.18) → 新建实验(2.14) → 启动调度(2.7) →
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运行中推送:物料变更(2.24)、步骤完成(2.21)、订单完成(2.23) →
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查询实验(2.5/2.6) → 3-2-1 转运(2.32) → 样品/废料取出(2.28)
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"""
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def __init__(
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self,
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bioyond_config: Optional[Dict[str, Any]] = None,
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station_resource: Optional[Dict[str, Any]] = None,
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debug_mode: bool = False, # 增加调试模式开关
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*args, **kwargs,
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):
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self.bioyond_config = bioyond_config or {
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"base_url": "http://192.168.1.200:44386",
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"api_key": "8A819E5C",
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"timeout": 30,
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"report_token": "CHANGE_ME_TOKEN"
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}
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self.http_service_started = False
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self.debug_mode = debug_mode
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super().__init__(deck=Deck, station_resource=station_resource, *args, **kwargs)
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logger.info(f"Bioyond工作站初始化完成 (debug_mode={self.debug_mode})")
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# 实例化并在后台线程启动 HTTP 报送服务
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self.order_status = {}
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try:
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t = threading.Thread(target=self._start_http_service_bg, daemon=True, name="unilab_http")
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t.start()
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except Exception as e:
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logger.error(f"unilab-server后台启动报送服务失败: {e}")
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@property
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def device_id(self) -> str:
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try:
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return getattr(self, "_ros_node").device_id # 兼容 ROS 场景
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except Exception:
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return "bioyond_workstation"
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def _start_http_service_bg(self, host: str = "192.168.1.104", port: int = 8080) -> None:
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logger.info("进入 _start_http_service_bg 函数")
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try:
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self.service = WorkstationHTTPService(self, host=host, port=port)
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logger.info("WorkstationHTTPService 实例化完成")
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self.service.start()
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self.http_service_started = True
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logger.info(f"unilab_HTTP 服务成功启动: {host}:{port}")
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#一直挂着,直到进程退出
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while True:
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time.sleep(1)
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except Exception as e:
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self.http_service_started = False
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logger.error(f"启动unilab_HTTP服务失败: {e}", exc_info=True)
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# -------------------- 基础HTTP封装 --------------------
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def _url(self, path: str) -> str:
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return f"{self.bioyond_config['base_url'].rstrip('/')}/{path.lstrip('/')}"
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def _post_lims(self, path: str, data: Optional[Any] = None) -> Dict[str, Any]:
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"""LIMS API:大多数接口用 {apiKey/requestTime,data} 包装"""
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payload = {
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"apiKey": self.bioyond_config["api_key"],
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"requestTime": _iso_utc_now_ms()
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}
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if data is not None:
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payload["data"] = data
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if self.debug_mode:
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# 模拟返回,不发真实请求
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logger.info(f"[DEBUG] POST {path} with payload={payload}")
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return {"debug": True, "url": self._url(path), "payload": payload, "status": "ok"}
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try:
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r = requests.post(
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self._url(path),
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json=payload,
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timeout=self.bioyond_config.get("timeout", 30),
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headers={"Content-Type": "application/json"}
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)
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r.raise_for_status()
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return r.json()
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except Exception as e:
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logger.error(f"POST {path} 失败: {e}")
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return {"error": str(e)}
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# --- 修正:_post_report / _post_report_raw 同样走 debug_mode ---
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def _post_report(self, path: str, data: Dict[str, Any]) -> Dict[str, Any]:
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payload = {
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"token": self.bioyond_config.get("report_token", ""),
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"request_time": _iso_utc_now_ms(),
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"data": data
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}
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if self.debug_mode:
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logger.info(f"[DEBUG] POST {path} with payload={payload}")
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return {"debug": True, "url": self._url(path), "payload": payload, "status": "ok"}
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try:
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r = requests.post(self._url(path), json=payload,
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timeout=self.bioyond_config.get("timeout", 30),
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headers={"Content-Type": "application/json"})
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r.raise_for_status()
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return r.json()
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except Exception as e:
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logger.error(f"POST {path} 失败: {e}")
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return {"error": str(e)}
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def _post_report_raw(self, path: str, body: Dict[str, Any]) -> Dict[str, Any]:
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if self.debug_mode:
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logger.info(f"[DEBUG] POST {path} with body={body}")
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return {"debug": True, "url": self._url(path), "payload": body, "status": "ok"}
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try:
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r = requests.post(self._url(path), json=body,
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timeout=self.bioyond_config.get("timeout", 30),
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headers={"Content-Type": "application/json"})
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r.raise_for_status()
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return r.json()
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except Exception as e:
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logger.error(f"POST {path} 失败: {e}")
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return {"error": str(e)}
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# -------------------- 单点接口封装 --------------------
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# 2.17 入库物料(单个)
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def storage_inbound(self, material_id: str, location_id: str) -> Dict[str, Any]:
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return self._post_lims("/api/lims/storage/inbound", {
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"materialId": material_id,
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"locationId": location_id
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})
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# 2.18 批量入库(多个)
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def storage_batch_inbound(self, items: List[Dict[str, str]]) -> Dict[str, Any]:
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"""
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items = [{"materialId": "...", "locationId": "..."}, ...]
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"""
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return self._post_lims("/api/lims/storage/batch-inbound", items)
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# 3.30 自动化上料(Excel -> JSON -> POST /api/lims/order/auto-feeding4to3)
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def auto_feeding4to3_from_xlsx(self, xlsx_path: str) -> Dict[str, Any]:
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"""
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根据固定模板解析 Excel:
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- 四号手套箱加样头面 (2-13行, 3-7列)
|
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- 四号手套箱原液瓶面 (15-23行, 3-9列)
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- 三号手套箱人工堆栈 (26-40行, 3-7列)
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"""
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path = Path(xlsx_path)
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if not path.exists():
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raise FileNotFoundError(f"未找到 Excel 文件:{path}")
|
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try:
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df = pd.read_excel(path, sheet_name=0, header=None, engine="openpyxl")
|
||||
except Exception as e:
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raise RuntimeError(f"读取 Excel 失败:{e}")
|
||||
|
||||
items: List[Dict[str, Any]] = []
|
||||
|
||||
# 四号手套箱 - 加样头面(2-13行, 3-7列)
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for _, row in df.iloc[1:13, 2:7].iterrows():
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item = {
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"sourceWHName": "四号手套箱堆栈",
|
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"posX": int(row[2]),
|
||||
"posY": int(row[3]),
|
||||
"posZ": int(row[4]),
|
||||
"materialName": str(row[5]).strip() if pd.notna(row[5]) else "",
|
||||
"quantity": float(row[6]) if pd.notna(row[6]) else 0.0,
|
||||
}
|
||||
if item["materialName"]:
|
||||
items.append(item)
|
||||
|
||||
# 四号手套箱 - 原液瓶面(15-23行, 3-9列)
|
||||
for _, row in df.iloc[14:23, 2:9].iterrows():
|
||||
item = {
|
||||
"sourceWHName": "四号手套箱堆栈",
|
||||
"posX": int(row[2]),
|
||||
"posY": int(row[3]),
|
||||
"posZ": int(row[4]),
|
||||
"materialName": str(row[5]).strip() if pd.notna(row[5]) else "",
|
||||
"quantity": float(row[6]) if pd.notna(row[6]) else 0.0,
|
||||
"materialType": str(row[7]).strip() if pd.notna(row[7]) else "",
|
||||
"targetWH": str(row[8]).strip() if pd.notna(row[8]) else "",
|
||||
}
|
||||
if item["materialName"]:
|
||||
items.append(item)
|
||||
|
||||
# 三号手套箱人工堆栈(26-40行, 3-7列)
|
||||
for _, row in df.iloc[25:40, 2:7].iterrows():
|
||||
item = {
|
||||
"sourceWHName": "三号手套箱人工堆栈",
|
||||
"posX": int(row[2]),
|
||||
"posY": int(row[3]),
|
||||
"posZ": int(row[4]),
|
||||
"materialType": str(row[5]).strip() if pd.notna(row[5]) else "",
|
||||
"materialId": str(row[6]).strip() if pd.notna(row[6]) else "",
|
||||
"quantity": 1 # 默认数量1
|
||||
}
|
||||
if item["materialId"] or item["materialType"]:
|
||||
items.append(item)
|
||||
|
||||
return self._post_lims("/api/lims/order/auto-feeding4to3", items)
|
||||
|
||||
|
||||
|
||||
def auto_batch_outbound_from_xlsx(self, xlsx_path: str) -> Dict[str, Any]:
|
||||
"""
|
||||
3.31 自动化下料(Excel -> JSON -> POST /api/lims/storage/auto-batch-out-bound)
|
||||
"""
|
||||
path = Path(xlsx_path)
|
||||
if not path.exists():
|
||||
raise FileNotFoundError(f"未找到 Excel 文件:{path}")
|
||||
|
||||
try:
|
||||
df = pd.read_excel(path, sheet_name=0, engine="openpyxl")
|
||||
except Exception as e:
|
||||
raise RuntimeError(f"读取 Excel 失败:{e}")
|
||||
|
||||
def pick(names: List[str]) -> Optional[str]:
|
||||
for n in names:
|
||||
if n in df.columns:
|
||||
return n
|
||||
return None
|
||||
|
||||
c_loc = pick(["locationId", "库位ID", "库位Id", "库位id"])
|
||||
c_wh = pick(["warehouseId", "仓库ID", "仓库Id", "仓库id"])
|
||||
c_qty = pick(["数量", "quantity"])
|
||||
c_x = pick(["x", "X", "posX", "坐标X"])
|
||||
c_y = pick(["y", "Y", "posY", "坐标Y"])
|
||||
c_z = pick(["z", "Z", "posZ", "坐标Z"])
|
||||
|
||||
required = [c_loc, c_wh, c_qty, c_x, c_y, c_z]
|
||||
if any(c is None for c in required):
|
||||
raise KeyError("Excel 缺少必要列:locationId/warehouseId/数量/x/y/z(支持多别名,至少要能匹配到)。")
|
||||
|
||||
def as_int(v, d=0):
|
||||
try:
|
||||
if pd.isna(v): return d
|
||||
return int(v)
|
||||
except Exception:
|
||||
try:
|
||||
return int(float(v))
|
||||
except Exception:
|
||||
return d
|
||||
|
||||
def as_float(v, d=0.0):
|
||||
try:
|
||||
if pd.isna(v): return d
|
||||
return float(v)
|
||||
except Exception:
|
||||
return d
|
||||
|
||||
def as_str(v, d=""):
|
||||
if v is None or (isinstance(v, float) and pd.isna(v)): return d
|
||||
s = str(v).strip()
|
||||
return s if s else d
|
||||
|
||||
items: List[Dict[str, Any]] = []
|
||||
for _, row in df.iterrows():
|
||||
items.append({
|
||||
"locationId": as_str(row[c_loc]),
|
||||
"warehouseId": as_str(row[c_wh]),
|
||||
"quantity": as_float(row[c_qty]),
|
||||
"x": as_int(row[c_x]),
|
||||
"y": as_int(row[c_y]),
|
||||
"z": as_int(row[c_z]),
|
||||
})
|
||||
|
||||
return self._post_lims("/api/lims/storage/auto-batch-out-bound", items)
|
||||
|
||||
# 2.14 新建实验
|
||||
def create_orders(self, xlsx_path: str) -> Dict[str, Any]:
|
||||
"""
|
||||
从 Excel 解析并创建实验(2.14)
|
||||
约定:
|
||||
- batchId = Excel 文件名(不含扩展名)
|
||||
- 物料列:所有以 "(g)" 结尾(不再读取“总质量(g)”列)
|
||||
- totalMass 自动计算为所有物料质量之和
|
||||
- createTime 缺失或为空时自动填充为当前日期(YYYY/M/D)
|
||||
"""
|
||||
path = Path(xlsx_path)
|
||||
if not path.exists():
|
||||
raise FileNotFoundError(f"未找到 Excel 文件:{path}")
|
||||
|
||||
try:
|
||||
df = pd.read_excel(path, sheet_name=0, engine="openpyxl")
|
||||
except Exception as e:
|
||||
raise RuntimeError(f"读取 Excel 失败:{e}")
|
||||
|
||||
# 列名容错:返回可选列名,找不到则返回 None
|
||||
def _pick(col_names: List[str]) -> Optional[str]:
|
||||
for c in col_names:
|
||||
if c in df.columns:
|
||||
return c
|
||||
return None
|
||||
|
||||
col_order_name = _pick(["配方ID", "orderName", "订单编号"])
|
||||
col_create_time = _pick(["创建日期", "createTime"])
|
||||
col_bottle_type = _pick(["配液瓶类型", "bottleType"])
|
||||
col_mix_time = _pick(["混匀时间(s)", "mixTime"])
|
||||
col_load = _pick(["扣电组装分液体积", "loadSheddingInfo"])
|
||||
col_pouch = _pick(["软包组装分液体积", "pouchCellInfo"])
|
||||
col_cond = _pick(["电导测试分液体积", "conductivityInfo"])
|
||||
col_cond_cnt = _pick(["电导测试分液瓶数", "conductivityBottleCount"])
|
||||
|
||||
# 物料列:所有以 (g) 结尾
|
||||
material_cols = [c for c in df.columns if isinstance(c, str) and c.endswith("(g)")]
|
||||
if not material_cols:
|
||||
raise KeyError("未发现任何以“(g)”结尾的物料列,请检查表头。")
|
||||
|
||||
batch_id = path.stem
|
||||
|
||||
def _to_ymd_slash(v) -> str:
|
||||
# 统一为 "YYYY/M/D";为空或解析失败则用当前日期
|
||||
if v is None or (isinstance(v, float) and pd.isna(v)) or str(v).strip() == "":
|
||||
ts = datetime.now()
|
||||
else:
|
||||
try:
|
||||
ts = pd.to_datetime(v)
|
||||
except Exception:
|
||||
ts = datetime.now()
|
||||
return f"{ts.year}/{ts.month}/{ts.day}"
|
||||
|
||||
def _as_int(val, default=0) -> int:
|
||||
try:
|
||||
if pd.isna(val):
|
||||
return default
|
||||
return int(val)
|
||||
except Exception:
|
||||
return default
|
||||
|
||||
def _as_str(val, default="") -> str:
|
||||
if val is None or (isinstance(val, float) and pd.isna(val)):
|
||||
return default
|
||||
s = str(val).strip()
|
||||
return s if s else default
|
||||
|
||||
orders: List[Dict[str, Any]] = []
|
||||
|
||||
for idx, row in df.iterrows():
|
||||
mats: List[Dict[str, Any]] = []
|
||||
total_mass = 0.0
|
||||
|
||||
for mcol in material_cols:
|
||||
val = row.get(mcol, None)
|
||||
if val is None or (isinstance(val, float) and pd.isna(val)):
|
||||
continue
|
||||
try:
|
||||
mass = float(val)
|
||||
except Exception:
|
||||
continue
|
||||
if mass > 0:
|
||||
mats.append({"name": mcol.replace("(g)", ""), "mass": mass})
|
||||
total_mass += mass
|
||||
|
||||
order_data = {
|
||||
"batchId": batch_id,
|
||||
"orderName": _as_str(row[col_order_name], default=f"{batch_id}_order_{idx+1}") if col_order_name else f"{batch_id}_order_{idx+1}",
|
||||
"createTime": _to_ymd_slash(row[col_create_time]) if col_create_time else _to_ymd_slash(None),
|
||||
"bottleType": _as_str(row[col_bottle_type], default="配液小瓶") if col_bottle_type else "配液小瓶",
|
||||
"mixTime": _as_int(row[col_mix_time]) if col_mix_time else 0,
|
||||
"loadSheddingInfo": _as_int(row[col_load]) if col_load else 0,
|
||||
"pouchCellInfo": _as_int(row[col_pouch]) if col_pouch else 0,
|
||||
"conductivityInfo": _as_int(row[col_cond]) if col_cond else 0,
|
||||
"conductivityBottleCount": _as_int(row[col_cond_cnt]) if col_cond_cnt else 0,
|
||||
"materialInfos": mats,
|
||||
"totalMass": round(total_mass, 4) # 自动汇总
|
||||
}
|
||||
orders.append(order_data)
|
||||
|
||||
# print(orders)
|
||||
|
||||
response = self._post_lims("/api/lims/order/orders", orders)
|
||||
self.order_status[response["data"]["orderCode"]] = "running"
|
||||
|
||||
while True:
|
||||
time.sleep(5)
|
||||
if self.order_status.get(response["data"]["orderCode"], None) == "finished":
|
||||
logger.info(f"配液实验已完成 ,即将执行 3-2-1 转运")
|
||||
break
|
||||
logger.info(f"等待配液实验完成")
|
||||
|
||||
self.transfer_3_to_2_to_1()
|
||||
r321 = self.wait_for_transfer_task()
|
||||
logger.info(f"3-2-1 转运完成,返回结果")
|
||||
return r321
|
||||
|
||||
|
||||
# 2.7 启动调度
|
||||
def scheduler_start(self) -> Dict[str, Any]:
|
||||
return self._post_lims("/api/lims/scheduler/start")
|
||||
# 3.10 停止调度
|
||||
def scheduler_stop(self) -> Dict[str, Any]:
|
||||
"""
|
||||
停止调度 (3.10)
|
||||
请求体只包含 apiKey 和 requestTime
|
||||
"""
|
||||
return self._post_lims("/api/lims/scheduler/stop")
|
||||
# 2.9 继续调度
|
||||
def scheduler_continue(self) -> Dict[str, Any]:
|
||||
"""
|
||||
继续调度 (2.9)
|
||||
请求体只包含 apiKey 和 requestTime
|
||||
"""
|
||||
return self._post_lims("/api/lims/scheduler/continue")
|
||||
|
||||
|
||||
|
||||
# 2.24 物料变更推送
|
||||
def report_material_change(self, material_obj: Dict[str, Any]) -> Dict[str, Any]:
|
||||
"""
|
||||
material_obj 按 2.24 的裸对象格式(包含 id/typeName/locations/detail 等)
|
||||
"""
|
||||
return self._post_report_raw("/report/material_change", material_obj)
|
||||
|
||||
# 2.21 步骤完成推送(BS → LIMS)
|
||||
def report_step_finish(self,
|
||||
order_code: str,
|
||||
order_name: str,
|
||||
step_name: str,
|
||||
step_id: str,
|
||||
sample_id: str,
|
||||
start_time: str,
|
||||
end_time: str,
|
||||
execution_status: str = "completed") -> Dict[str, Any]:
|
||||
data = {
|
||||
"orderCode": order_code,
|
||||
"orderName": order_name,
|
||||
"stepName": step_name,
|
||||
"stepId": step_id,
|
||||
"sampleId": sample_id,
|
||||
"startTime": start_time,
|
||||
"endTime": end_time,
|
||||
"executionStatus": execution_status
|
||||
}
|
||||
return self._post_report("/report/step_finish", data)
|
||||
|
||||
# 2.23 订单完成推送(BS → LIMS)
|
||||
def report_order_finish(self,
|
||||
order_code: str,
|
||||
order_name: str,
|
||||
start_time: str,
|
||||
end_time: str,
|
||||
status: str = "30", # 30 完成 / -11 异常停止 / -12 人工停止
|
||||
workflow_status: str = "Finished",
|
||||
completion_time: Optional[str] = None,
|
||||
used_materials: Optional[List[Dict[str, Any]]] = None) -> Dict[str, Any]:
|
||||
data = {
|
||||
"orderCode": order_code,
|
||||
"orderName": order_name,
|
||||
"startTime": start_time,
|
||||
"endTime": end_time,
|
||||
"status": status,
|
||||
"workflowStatus": workflow_status,
|
||||
"completionTime": completion_time or end_time,
|
||||
"usedMaterials": used_materials or []
|
||||
}
|
||||
return self._post_report("/report/order_finish", data)
|
||||
|
||||
# 2.5 批量查询实验报告(用于轮询是否完成)
|
||||
def order_list(self,
|
||||
status: Optional[str] = None,
|
||||
begin_time: Optional[str] = None,
|
||||
end_time: Optional[str] = None,
|
||||
filter_text: Optional[str] = None,
|
||||
skip: int = 0, page: int = 10) -> Dict[str, Any]:
|
||||
data: Dict[str, Any] = {"skipCount": skip, "pageCount": page}
|
||||
if status is not None: # 80 成功 / 90 失败 / 100 执行中
|
||||
data["status"] = status
|
||||
if begin_time:
|
||||
data["timeType"] = "CreationTime"
|
||||
data["beginTime"] = begin_time
|
||||
if end_time:
|
||||
data["endTime"] = end_time
|
||||
if filter_text:
|
||||
data["filter"] = filter_text
|
||||
return self._post_lims("/api/lims/order/order-list", data)
|
||||
|
||||
# 2.6 实验报告查询(根据任务ID拿详情)
|
||||
def order_report(self, order_id: str) -> Dict[str, Any]:
|
||||
return self._post_lims("/api/lims/order/order-report", order_id)
|
||||
|
||||
# 2.32 3-2-1 物料转运
|
||||
def transfer_3_to_2_to_1(self,
|
||||
# source_wh_id: Optional[str] = None,
|
||||
source_wh_id: Optional[str] = '3a19debc-84b4-0359-e2d4-b3beea49348b',
|
||||
source_x: int = 1, source_y: int = 1, source_z: int = 1) -> Dict[str, Any]:
|
||||
payload: Dict[str, Any] = {
|
||||
"sourcePosX": source_x, "sourcePosY": source_y, "sourcePosZ": source_z
|
||||
}
|
||||
if source_wh_id:
|
||||
payload["sourceWHID"] = source_wh_id
|
||||
return self._post_lims("/api/lims/order/transfer-task3To2To1", payload)
|
||||
|
||||
# 2.28 样品/废料取出
|
||||
def take_out(self,
|
||||
order_id: str,
|
||||
preintake_ids: Optional[List[str]] = None,
|
||||
material_ids: Optional[List[str]] = None) -> Dict[str, Any]:
|
||||
data = {
|
||||
"orderId": order_id,
|
||||
"preintakeIds": preintake_ids or [],
|
||||
"materialIds": material_ids or []
|
||||
}
|
||||
return self._post_lims("/api/lims/order/take-out", data)
|
||||
|
||||
# --------(可选)占位方法:文档未定义的“1号站内部流程 / 1-2转运”--------
|
||||
def start_station1_internal_flow(self, **kwargs) -> None:
|
||||
logger.info("启动1号站内部流程(占位,按现场系统填充具体指令)")
|
||||
|
||||
|
||||
# 3.x 1→2 物料转运
|
||||
def transfer_1_to_2(self) -> Dict[str, Any]:
|
||||
"""
|
||||
1→2 物料转运
|
||||
URL: /api/lims/order/transfer-task1To2
|
||||
只需要 apiKey 和 requestTime
|
||||
"""
|
||||
return self._post_lims("/api/lims/order/transfer-task1To2")
|
||||
|
||||
|
||||
# -------------------- 整体编排 --------------------
|
||||
def run_full_workflow(self,
|
||||
inbound_items: List[Dict[str, str]],
|
||||
orders: List[Dict[str, Any]],
|
||||
poll_filter_code: Optional[str] = None,
|
||||
poll_timeout_s: int = 600,
|
||||
poll_interval_s: int = 5,
|
||||
transfer_source: Optional[Dict[str, Any]] = None,
|
||||
takeout_order_id: Optional[str] = None) -> None:
|
||||
"""
|
||||
一键串联:
|
||||
1) 入库 3-4 个物料 → 2) 新建实验 → 3) 启动调度
|
||||
运行中(如需):4) 物料变更推送 5) 步骤完成推送 6) 订单完成推送
|
||||
完成后:查询实验(2.5/2.6)→ 7) 3-2-1 转运 → 8) 1号站内部流程
|
||||
→ 9) 1-2 转运 → 10) 样品/废料取出
|
||||
"""
|
||||
# 1. 入库(多于1个就用批量接口 2.18)
|
||||
if len(inbound_items) == 1:
|
||||
r = self.storage_inbound(inbound_items[0]["materialId"], inbound_items[0]["locationId"])
|
||||
logger.info(f"单个入库结果: {r}")
|
||||
else:
|
||||
r = self.storage_batch_inbound(inbound_items)
|
||||
logger.info(f"批量入库结果: {r}")
|
||||
|
||||
# 2. 新建实验(2.14)
|
||||
r = self.create_orders(orders)
|
||||
logger.info(f"新建实验结果: {r}")
|
||||
|
||||
# 3. 启动调度(2.7)
|
||||
r = self.scheduler_start()
|
||||
logger.info(f"启动调度结果: {r}")
|
||||
|
||||
# —— 运行中各类推送(2.24 / 2.21 / 2.23),通常由实际任务驱动,这里提供调用方式 —— #
|
||||
# self.report_material_change({...})
|
||||
# self.report_step_finish(order_code="BSO...", order_name="配液分液", step_name="xxx", step_id="...", sample_id="...",
|
||||
# start_time=_iso_utc_now_ms(), end_time=_iso_utc_now_ms(), execution_status="completed")
|
||||
# self.report_order_finish(order_code="BSO...", order_name="配液分液", start_time="...", end_time=_iso_utc_now_ms())
|
||||
|
||||
# 完成后才能转运:用 2.5 批量查询配合 filter=任务编码 轮询到 status=80(成功)
|
||||
if poll_filter_code:
|
||||
import time
|
||||
deadline = time.time() + poll_timeout_s
|
||||
while time.time() < deadline:
|
||||
res = self.order_list(status="80", filter_text=poll_filter_code, page=5)
|
||||
if isinstance(res, dict) and res.get("data", {}).get("items"):
|
||||
logger.info(f"实验 {poll_filter_code} 已完成:{res['data']['items'][0]}")
|
||||
break
|
||||
time.sleep(poll_interval_s)
|
||||
else:
|
||||
logger.warning(f"等待实验 {poll_filter_code} 完成超时(未到 status=80)")
|
||||
|
||||
# 7. 启动 3-2-1 转运(2.32)
|
||||
if transfer_source:
|
||||
r = self.transfer_3_to_2_to_1(
|
||||
source_wh_id=transfer_source.get("sourceWHID"),
|
||||
source_x=transfer_source.get("sourcePosX", 1),
|
||||
source_y=transfer_source.get("sourcePosY", 1),
|
||||
source_z=transfer_source.get("sourcePosZ", 1),
|
||||
)
|
||||
logger.info(f"3-2-1 转运结果: {r}")
|
||||
|
||||
# 8. 1号站内部流程(占位)
|
||||
self.start_station1_internal_flow()
|
||||
|
||||
# 9. 1→2 转运(占位)
|
||||
self.transfer_1_to_2()
|
||||
|
||||
# 10. 样品/废料取出(2.28)
|
||||
if takeout_order_id:
|
||||
r = self.take_out(order_id=takeout_order_id)
|
||||
logger.info(f"样品/废料取出结果: {r}")
|
||||
|
||||
# 2.5 批量查询实验报告
|
||||
def order_list_v2(self,
|
||||
timeType: str = "string",
|
||||
beginTime: str = "",
|
||||
endTime: str = "",
|
||||
status: str = "",
|
||||
filter: str = "物料转移任务",
|
||||
skipCount: int = 0,
|
||||
pageCount: int = 1,
|
||||
sorting: str = "") -> Dict[str, Any]:
|
||||
"""
|
||||
批量查询实验报告的详细信息 (2.5)
|
||||
URL: /api/lims/order/order-list
|
||||
参数默认值和接口文档保持一致
|
||||
"""
|
||||
data: Dict[str, Any] = {
|
||||
"timeType": timeType,
|
||||
"beginTime": beginTime,
|
||||
"endTime": endTime,
|
||||
"status": status,
|
||||
"filter": filter,
|
||||
"skipCount": skipCount,
|
||||
"pageCount": pageCount,
|
||||
"sorting": sorting
|
||||
}
|
||||
return self._post_lims("/api/lims/order/order-list", data)
|
||||
|
||||
|
||||
def wait_for_transfer_task(self, timeout: int = 600, interval: int = 3) -> bool:
|
||||
"""
|
||||
轮询查询物料转移任务是否成功完成 (status=80)
|
||||
- timeout: 最大等待秒数 (默认600秒)
|
||||
- interval: 轮询间隔秒数 (默认3秒)
|
||||
返回 True 表示找到并成功完成,False 表示超时未找到
|
||||
"""
|
||||
now = datetime.now()
|
||||
beginTime = now.strftime("%Y-%m-%dT%H:%M:%SZ")
|
||||
endTime = (now + timedelta(minutes=5)).strftime("%Y-%m-%dT%H:%M:%SZ")
|
||||
print(beginTime, endTime)
|
||||
|
||||
deadline = time.time() + timeout
|
||||
|
||||
while time.time() < deadline:
|
||||
result = self.order_list_v2(
|
||||
timeType="string",
|
||||
beginTime=beginTime,
|
||||
endTime=endTime,
|
||||
status="",
|
||||
filter="物料转移任务",
|
||||
skipCount=0,
|
||||
pageCount=1,
|
||||
sorting=""
|
||||
)
|
||||
print(result)
|
||||
|
||||
items = result.get("data", {}).get("items", [])
|
||||
for item in items:
|
||||
name = item.get("name", "")
|
||||
status = item.get("status")
|
||||
if name.startswith("物料转移任务") and status == 80:
|
||||
logger.info(f"硬件转移动作完成: {name}")
|
||||
return True
|
||||
|
||||
time.sleep(interval)
|
||||
|
||||
logger.warning("超时未找到成功的物料转移任务")
|
||||
return False
|
||||
|
||||
|
||||
# --------------------------------
|
||||
if __name__ == "__main__":
|
||||
ws = BioyondWorkstation()
|
||||
# ws.scheduler_stop()
|
||||
ws.scheduler_start()
|
||||
logger.info("调度启动完成")
|
||||
|
||||
# ws.scheduler_continue()
|
||||
# 3.30 上料:读取模板 Excel 自动解析并 POST
|
||||
r1 = ws.auto_feeding4to3_from_xlsx(r"C:\ML\GitHub\Uni-Lab-OS\unilabos\devices\workstation\bioyond_cell\样品导入模板 (8).xlsx")
|
||||
ws.wait_for_transfer_task()
|
||||
logger.info("4号箱向3号箱转运物料转移任务已完成")
|
||||
|
||||
# ws.scheduler_start()
|
||||
# print(r1["payload"]["data"]) # 调试模式下可直接看到要发的 JSON items
|
||||
|
||||
# 新建实验
|
||||
res = ws.create_orders("C:/ML/GitHub/Uni-Lab-OS/unilabos/devices/workstation/bioyond_cell/2025092501.xlsx")
|
||||
# ws.scheduler_start()
|
||||
# print(res)
|
||||
|
||||
#1号站启动
|
||||
ws.transfer_1_to_2()
|
||||
ws.wait_for_transfer_task()
|
||||
logger.info("1号站向2号站转移任务完成")
|
||||
logger.info("全流程结束")
|
||||
|
||||
# 3.31 下料:同理
|
||||
# r2 = ws.auto_batch_outbound_from_xlsx(r"C:/path/样品导入模板 (8).xlsx")
|
||||
# print(r2["payload"]["data"])
|
||||
@@ -17,7 +17,7 @@ API_CONFIG = {
|
||||
"report_token": os.getenv("BIOYOND_REPORT_TOKEN", "CHANGE_ME_TOKEN"),
|
||||
|
||||
# HTTP 服务配置
|
||||
"HTTP_host": os.getenv("BIOYOND_HTTP_HOST", "172.21.33.30"), # HTTP服务监听地址,监听计算机飞连ip地址
|
||||
"HTTP_host": os.getenv("BIOYOND_HTTP_HOST", "172.21.32.115"), # HTTP服务监听地址,监听计算机飞连ip地址
|
||||
"HTTP_port": int(os.getenv("BIOYOND_HTTP_PORT", "8080")),
|
||||
"debug_mode": False,# 调试模式
|
||||
}
|
||||
@@ -155,8 +155,9 @@ MATERIAL_TYPE_MAPPINGS = {
|
||||
"100ml液体": ("YB_1Bottle100mlCarrier", "d37166b3-ecaa-481e-bd84-3032b795ba07"),
|
||||
"液": ("YB_1BottleCarrier", "3a190ca1-2add-2b23-f8e1-bbd348b7f790"),
|
||||
"高粘液": ("YB_1GaoNianYeBottleCarrier", "abe8df30-563d-43d2-85e0-cabec59ddc16"),
|
||||
"加样头(大)": ("YB_jia_yang_tou_da", "3a190ca0-b2f6-9aeb-8067-547e72c11469"),
|
||||
"加样头(大)板": ("YB_jia_yang_tou_da_1X1_carrier", "a8e714ae-2a4e-4eb9-9614-e4c140ec3f16"),
|
||||
# "加样头(大)": ("YB_jia_yang_tou_da", "3a190ca0-b2f6-9aeb-8067-547e72c11469"),
|
||||
"加样头(大)": ("YB_jia_yang_tou_da_1X1_carrier", "3a190ca0-b2f6-9aeb-8067-547e72c11469"),
|
||||
# "加样头(大)板": ("YB_jia_yang_tou_da_1X1_carrier", "a8e714ae-2a4e-4eb9-9614-e4c140ec3f16"),
|
||||
"5ml分液瓶板": ("YB_6x5ml_DispensingVialCarrier", "3a192fa4-007d-ec7b-456e-2a8be7a13f23"),
|
||||
"5ml分液瓶": ("YB_fen_ye_5ml_Bottle", "3a192c2a-ebb7-58a1-480d-8b3863bf74f4"),
|
||||
"20ml分液瓶板": ("YB_6x20ml_DispensingVialCarrier", "3a192fa4-47db-3449-162a-eaf8aba57e27"),
|
||||
|
||||
@@ -21,7 +21,6 @@ from unilabos.ros.nodes.base_device_node import ROS2DeviceNode, BaseROS2DeviceNo
|
||||
from unilabos.ros.nodes.presets.workstation import ROS2WorkstationNode
|
||||
from pylabrobot.resources.resource import Resource as ResourcePLR
|
||||
|
||||
from unilabos.resources.bioyond.decks import YB_Deck
|
||||
from unilabos.devices.workstation.bioyond_studio.config import (
|
||||
API_CONFIG, WORKFLOW_MAPPINGS, MATERIAL_TYPE_MAPPINGS, WAREHOUSE_MAPPING
|
||||
)
|
||||
@@ -64,7 +63,7 @@ class BioyondResourceSynchronizer(ResourceSynchronizer):
|
||||
logger.error("Bioyond API客户端未初始化")
|
||||
return False
|
||||
|
||||
bioyond_data = self.bioyond_api_client.stock_material('{"typeMode": 1, "includeDetail": true}')
|
||||
bioyond_data = self.bioyond_api_client.stock_material('{"typeMode": 2, "includeDetail": true}')
|
||||
if not bioyond_data:
|
||||
logger.warning("从Bioyond获取的物料数据为空")
|
||||
return False
|
||||
@@ -138,7 +137,7 @@ class BioyondWorkstation(WorkstationBase):
|
||||
# 初始化父类
|
||||
super().__init__(
|
||||
# 桌子
|
||||
deck=YB_Deck("YB_Deck14"),
|
||||
deck=deck,
|
||||
*args,
|
||||
**kwargs,
|
||||
)
|
||||
|
||||
@@ -137,7 +137,7 @@ bioyond_cell:
|
||||
WH4_x5_y1_z1_5_quantity: 0.0
|
||||
WH4_x5_y2_z1_10_materialName: ''
|
||||
WH4_x5_y2_z1_10_quantity: 0.0
|
||||
xlsx_path: unilabos\devices\workstation\bioyond_studio\bioyond_cell\material_template.xlsx
|
||||
xlsx_path: C:/ML/GitHub/Uni-Lab-OS/unilabos/devices/workstation/bioyond_studio/bioyond_cell/material_template.xlsx
|
||||
handles: {}
|
||||
placeholder_keys: {}
|
||||
result: {}
|
||||
@@ -463,7 +463,7 @@ bioyond_cell:
|
||||
default: 0.0
|
||||
type: number
|
||||
xlsx_path:
|
||||
default: unilabos\devices\workstation\bioyond_studio\bioyond_cell\material_template.xlsx
|
||||
default: C:/ML/GitHub/Uni-Lab-OS/unilabos/devices/workstation/bioyond_studio/bioyond_cell/material_template.xlsx
|
||||
type: string
|
||||
required: []
|
||||
type: object
|
||||
@@ -473,31 +473,6 @@ bioyond_cell:
|
||||
title: auto_feeding4to3参数
|
||||
type: object
|
||||
type: UniLabJsonCommand
|
||||
auto-auto_feeding4to3_from_xlsx:
|
||||
feedback: {}
|
||||
goal: {}
|
||||
goal_default:
|
||||
xlsx_path: null
|
||||
handles: {}
|
||||
placeholder_keys: {}
|
||||
result: {}
|
||||
schema:
|
||||
description: ''
|
||||
properties:
|
||||
feedback: {}
|
||||
goal:
|
||||
properties:
|
||||
xlsx_path:
|
||||
type: string
|
||||
required:
|
||||
- xlsx_path
|
||||
type: object
|
||||
result: {}
|
||||
required:
|
||||
- goal
|
||||
title: auto_feeding4to3_from_xlsx参数
|
||||
type: object
|
||||
type: UniLabJsonCommand
|
||||
auto-create_and_inbound_materials:
|
||||
feedback: {}
|
||||
goal: {}
|
||||
@@ -1039,7 +1014,7 @@ bioyond_cell:
|
||||
goal: {}
|
||||
goal_default:
|
||||
order_code: null
|
||||
timeout: 1800
|
||||
timeout: 36000
|
||||
handles: {}
|
||||
placeholder_keys: {}
|
||||
result: {}
|
||||
@@ -1052,7 +1027,7 @@ bioyond_cell:
|
||||
order_code:
|
||||
type: string
|
||||
timeout:
|
||||
default: 1800
|
||||
default: 36000
|
||||
type: integer
|
||||
required:
|
||||
- order_code
|
||||
@@ -1105,9 +1080,11 @@ bioyond_cell:
|
||||
init_param_schema:
|
||||
config:
|
||||
properties:
|
||||
bioyond_config:
|
||||
config:
|
||||
type: object
|
||||
deck:
|
||||
type: string
|
||||
station_resource:
|
||||
protocol_type:
|
||||
type: string
|
||||
required: []
|
||||
type: object
|
||||
|
||||
@@ -22,13 +22,13 @@ BIOYOND_PolymerReactionStation_Deck:
|
||||
init_param_schema: {}
|
||||
registry_type: resource
|
||||
version: 1.0.0
|
||||
YB_Deck16:
|
||||
BIOYOND_YB_Deck:
|
||||
category:
|
||||
- deck
|
||||
class:
|
||||
module: unilabos.resources.bioyond.decks:YB_Deck
|
||||
module: unilabos.resources.bioyond.decks:BIOYOND_YB_Deck
|
||||
type: pylabrobot
|
||||
description: BIOYOND PolymerReactionStation Deck
|
||||
description: BIOYOND_YB_Deck
|
||||
handles: []
|
||||
icon: 配液站.webp
|
||||
init_param_schema: {}
|
||||
|
||||
@@ -1,4 +1,5 @@
|
||||
from os import name
|
||||
from pickle import TRUE
|
||||
from pylabrobot.resources import Deck, Coordinate, Rotation
|
||||
|
||||
from unilabos.resources.bioyond.warehouses import bioyond_warehouse_1x4x4, bioyond_warehouse_1x4x2, bioyond_warehouse_liquid_and_lid_handling, bioyond_warehouse_1x2x2, bioyond_warehouse_1x3x3, bioyond_warehouse_10x1x1, bioyond_warehouse_3x3x1, bioyond_warehouse_3x3x1_2, bioyond_warehouse_5x1x1
|
||||
@@ -71,7 +72,7 @@ class BIOYOND_PolymerPreparationStation_Deck(Deck):
|
||||
class BIOYOND_YB_Deck(Deck):
|
||||
def __init__(
|
||||
self,
|
||||
name: str = "YB_Deck",
|
||||
name: str = "YB_Bioyond_Deck",
|
||||
size_x: float = 4150,
|
||||
size_y: float = 1400.0,
|
||||
size_z: float = 2670.0,
|
||||
@@ -115,10 +116,10 @@ class BIOYOND_YB_Deck(Deck):
|
||||
for warehouse_name, warehouse in self.warehouses.items():
|
||||
self.assign_child_resource(warehouse, location=self.warehouse_locations[warehouse_name])
|
||||
|
||||
def YB_Deck(name: str) -> Deck:
|
||||
by=BIOYOND_YB_Deck(name=name)
|
||||
by.setup()
|
||||
return by
|
||||
# def YB_Deck(name: str) -> Deck:
|
||||
# # by=BIOYOND_YB_Deck(name=name)
|
||||
# # by.setup()
|
||||
# return None
|
||||
|
||||
|
||||
|
||||
|
||||
Reference in New Issue
Block a user