mirror of
https://github.com/dptech-corp/Uni-Lab-OS.git
synced 2026-02-06 15:05:13 +00:00
fix:debug dummy2
This commit is contained in:
ZiWei
@@ -25,6 +25,7 @@ from .reset_handling_protocol import generate_reset_handling_protocol
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from .dry_protocol import generate_dry_protocol
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from .recrystallize_protocol import generate_recrystallize_protocol
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from .hydrogenate_protocol import generate_hydrogenate_protocol
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from .transfer_protocol import generate_transfer_protocol
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# Define a dictionary of protocol generators.
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@@ -53,5 +54,6 @@ action_protocol_generators = {
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StartStirProtocol: generate_start_stir_protocol,
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StirProtocol: generate_stir_protocol,
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StopStirProtocol: generate_stop_stir_protocol,
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TransferProtocol: generate_transfer_protocol,
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WashSolidProtocol: generate_wash_solid_protocol,
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}
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19
unilabos/compile/transfer_protocol.py
Normal file
19
unilabos/compile/transfer_protocol.py
Normal file
@@ -0,0 +1,19 @@
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from unilabos.compile.pump_protocol import generate_pump_protocol_with_rinsing
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def generate_transfer_protocol(graph, node, step_id):
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"""
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Generate transfer protocol using pump protocol with default flow rates.
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This is a simplified version of PumpTransferProtocol for basic transfers.
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"""
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# Add default flow rates for basic transfer protocol
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node_with_defaults = node.copy()
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# Set default flow rates if not present
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if not hasattr(node, 'flowrate'):
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node_with_defaults['flowrate'] = 2.5
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if not hasattr(node, 'transfer_flowrate'):
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node_with_defaults['transfer_flowrate'] = 0.5
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# Use the existing pump protocol generator
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return generate_pump_protocol_with_rinsing(graph, node_with_defaults, step_id)
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@@ -1,224 +1,3 @@
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hplc.agilent:
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category:
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- characterization_chromatic
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class:
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action_value_mappings:
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auto-check_status:
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feedback: {}
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||||
goal: {}
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||||
goal_default: {}
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handles: []
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result: {}
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schema:
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description: 检查安捷伦HPLC设备状态的函数。用于监控设备的运行状态、连接状态、错误信息等关键指标。该函数定期查询设备状态，确保系统稳定运行，及时发现和报告设备异常。适用于自动化流程中的设备监控、故障诊断、系统维护等场景。
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properties:
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feedback: {}
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goal:
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properties: {}
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||||
required: []
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type: object
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||||
result: {}
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||||
required:
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- goal
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title: check_status参数
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type: object
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type: UniLabJsonCommand
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auto-extract_data_from_txt:
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feedback: {}
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goal: {}
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goal_default:
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file_path: null
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handles: []
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result: {}
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schema:
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description: 从文本文件中提取分析数据的函数。用于解析安捷伦HPLC生成的结果文件，提取峰面积、保留时间、浓度等关键分析数据。支持多种文件格式的自动识别和数据结构化处理，为后续数据分析和报告生成提供标准化的数据格式。适用于批量数据处理、结果验证、质量控制等分析工作流程。
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properties:
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feedback: {}
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goal:
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properties:
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file_path:
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type: string
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required:
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- file_path
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type: object
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result: {}
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required:
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- goal
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title: extract_data_from_txt参数
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type: object
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type: UniLabJsonCommand
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auto-start_sequence:
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feedback: {}
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goal: {}
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goal_default:
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params: null
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resource: null
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wf_name: null
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handles: []
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result: {}
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schema:
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description: 启动安捷伦HPLC分析序列的函数。用于执行预定义的分析方法序列，包括样品进样、色谱分离、检测等完整的分析流程。支持参数配置、资源分配、工作流程管理等功能，实现全自动的样品分析。适用于批量样品处理、标准化分析、质量检测等需要连续自动分析的应用场景。
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properties:
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feedback: {}
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goal:
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properties:
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params:
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type: string
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resource:
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type: object
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wf_name:
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type: string
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required:
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- wf_name
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type: object
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||||
result: {}
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||||
required:
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- goal
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title: start_sequence参数
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type: object
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||||
type: UniLabJsonCommand
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auto-try_close_sub_device:
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||||
feedback: {}
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||||
goal: {}
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||||
goal_default:
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device_name: null
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handles: []
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result: {}
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schema:
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description: 尝试关闭HPLC子设备的函数。用于安全地关闭泵、检测器、进样器等各个子模块，确保设备正常断开连接并保护硬件安全。该函数提供错误处理和状态确认机制，避免强制关闭可能造成的设备损坏。适用于设备维护、系统重启、紧急停机等需要安全关闭设备的场景。
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properties:
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||||
feedback: {}
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||||
goal:
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||||
properties:
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||||
device_name:
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||||
type: string
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||||
required: []
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||||
type: object
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||||
result: {}
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||||
required:
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||||
- goal
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||||
title: try_close_sub_device参数
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||||
type: object
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||||
type: UniLabJsonCommand
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||||
auto-try_open_sub_device:
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feedback: {}
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||||
goal: {}
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||||
goal_default:
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||||
device_name: null
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handles: []
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result: {}
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||||
schema:
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||||
description: 尝试打开HPLC子设备的函数。用于初始化和连接泵、检测器、进样器等各个子模块，建立设备通信并进行自检。该函数提供连接验证和错误恢复机制，确保子设备正常启动并准备就绪。适用于设备初始化、系统启动、设备重连等需要建立设备连接的场景。
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properties:
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||||
feedback: {}
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||||
goal:
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||||
properties:
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||||
device_name:
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||||
type: string
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||||
required: []
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||||
type: object
|
||||
result: {}
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||||
required:
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||||
- goal
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||||
title: try_open_sub_device参数
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||||
type: object
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||||
type: UniLabJsonCommand
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||||
execute_command_from_outer:
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feedback: {}
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||||
goal:
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||||
command: command
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goal_default:
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command: ''
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||||
handles: []
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||||
result:
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||||
success: success
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||||
schema:
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||||
description: ''
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||||
properties:
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||||
feedback:
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||||
properties:
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||||
status:
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||||
type: string
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||||
required:
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||||
- status
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||||
title: SendCmd_Feedback
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||||
type: object
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||||
goal:
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||||
properties:
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||||
command:
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||||
type: string
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||||
required:
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||||
- command
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||||
title: SendCmd_Goal
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||||
type: object
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||||
result:
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||||
properties:
|
||||
return_info:
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||||
type: string
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||||
success:
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||||
type: boolean
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||||
required:
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- return_info
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||||
- success
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||||
title: SendCmd_Result
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||||
type: object
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||||
required:
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||||
- goal
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||||
title: SendCmd
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type: object
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||||
type: SendCmd
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module: unilabos.devices.hplc.AgilentHPLC:HPLCDriver
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status_types:
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could_run: bool
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data_file: list
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device_status: str
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driver_init_ok: bool
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finish_status: str
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is_running: bool
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status_text: str
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success: bool
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type: python
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config_info: []
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||||
description: 安捷伦高效液相色谱（HPLC）分析设备，用于复杂化合物的分离、检测和定量分析。该设备通过UI自动化技术控制安捷伦ChemStation软件，实现全自动的样品分析流程。具备序列启动、设备状态监控、数据文件提取、结果处理等功能。支持多样品批量处理和实时状态反馈，适用于药物分析、环境检测、食品安全、化学研究等需要高精度色谱分析的实验室应用。
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handles: []
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||||
icon: ''
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init_param_schema:
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||||
config:
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||||
properties:
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||||
driver_debug:
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default: false
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||||
type: string
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||||
required: []
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||||
type: object
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||||
data:
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||||
properties:
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||||
could_run:
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||||
type: boolean
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||||
data_file:
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||||
type: array
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||||
device_status:
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||||
type: string
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||||
driver_init_ok:
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||||
type: boolean
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||||
finish_status:
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||||
type: string
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||||
is_running:
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||||
type: boolean
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||||
status_text:
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||||
type: string
|
||||
success:
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||||
type: boolean
|
||||
required:
|
||||
- status_text
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||||
- device_status
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||||
- could_run
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||||
- driver_init_ok
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||||
- is_running
|
||||
- success
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||||
- finish_status
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||||
- data_file
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||||
type: object
|
||||
version: 1.0.0
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hplc.agilent-zhida:
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||||
category:
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||||
- characterization_chromatic
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@@ -1,190 +1 @@
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raman.home_made:
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category:
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- characterization_optic
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class:
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action_value_mappings:
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||||
auto-ccd_time:
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||||
feedback: {}
|
||||
goal: {}
|
||||
goal_default:
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||||
int_time: null
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||||
handles: []
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||||
result: {}
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||||
schema:
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||||
description: 设置CCD检测器积分时间的函数。用于配置拉曼光谱仪的信号采集时间，控制光谱数据的质量和信噪比。较长的积分时间可获得更高的信号强度和更好的光谱质量，但会增加测量时间。该函数允许根据样品特性和测量要求动态调整检测参数，优化测量效果。
|
||||
properties:
|
||||
feedback: {}
|
||||
goal:
|
||||
properties:
|
||||
int_time:
|
||||
type: string
|
||||
required:
|
||||
- int_time
|
||||
type: object
|
||||
result: {}
|
||||
required:
|
||||
- goal
|
||||
title: ccd_time参数
|
||||
type: object
|
||||
type: UniLabJsonCommand
|
||||
auto-laser_on_power:
|
||||
feedback: {}
|
||||
goal: {}
|
||||
goal_default:
|
||||
output_voltage_laser: null
|
||||
handles: []
|
||||
result: {}
|
||||
schema:
|
||||
description: 设置激光器输出功率的函数。用于控制拉曼光谱仪激光器的功率输出，调节激光强度以适应不同样品的测量需求。适当的激光功率能够获得良好的拉曼信号同时避免样品损伤。该函数支持精确的功率控制，确保测量结果的稳定性和重现性。
|
||||
properties:
|
||||
feedback: {}
|
||||
goal:
|
||||
properties:
|
||||
output_voltage_laser:
|
||||
type: string
|
||||
required:
|
||||
- output_voltage_laser
|
||||
type: object
|
||||
result: {}
|
||||
required:
|
||||
- goal
|
||||
title: laser_on_power参数
|
||||
type: object
|
||||
type: UniLabJsonCommand
|
||||
auto-raman_without_background:
|
||||
feedback: {}
|
||||
goal: {}
|
||||
goal_default:
|
||||
int_time: null
|
||||
laser_power: null
|
||||
handles: []
|
||||
result: {}
|
||||
schema:
|
||||
description: 执行无背景扣除的拉曼光谱测量函数。用于直接采集样品的拉曼光谱信号，不进行背景校正处理。该函数配置积分时间和激光功率参数，获取原始光谱数据用于后续的数据处理分析。适用于对光谱数据质量要求较高或需要自定义背景处理流程的测量场景。
|
||||
properties:
|
||||
feedback: {}
|
||||
goal:
|
||||
properties:
|
||||
int_time:
|
||||
type: string
|
||||
laser_power:
|
||||
type: string
|
||||
required:
|
||||
- int_time
|
||||
- laser_power
|
||||
type: object
|
||||
result: {}
|
||||
required:
|
||||
- goal
|
||||
title: raman_without_background参数
|
||||
type: object
|
||||
type: UniLabJsonCommand
|
||||
auto-raman_without_background_average:
|
||||
feedback: {}
|
||||
goal: {}
|
||||
goal_default:
|
||||
average: null
|
||||
int_time: null
|
||||
laser_power: null
|
||||
sample_name: null
|
||||
handles: []
|
||||
result: {}
|
||||
schema:
|
||||
description: 执行多次平均的无背景拉曼光谱测量函数。通过多次测量取平均值来提高光谱数据的信噪比和测量精度，减少随机噪声影响。该函数支持自定义平均次数、积分时间、激光功率等参数，并可为样品指定名称便于数据管理。适用于对测量精度要求较高的定量分析和研究应用。
|
||||
properties:
|
||||
feedback: {}
|
||||
goal:
|
||||
properties:
|
||||
average:
|
||||
type: string
|
||||
int_time:
|
||||
type: string
|
||||
laser_power:
|
||||
type: string
|
||||
sample_name:
|
||||
type: string
|
||||
required:
|
||||
- sample_name
|
||||
- int_time
|
||||
- laser_power
|
||||
- average
|
||||
type: object
|
||||
result: {}
|
||||
required:
|
||||
- goal
|
||||
title: raman_without_background_average参数
|
||||
type: object
|
||||
type: UniLabJsonCommand
|
||||
raman_cmd:
|
||||
feedback: {}
|
||||
goal:
|
||||
command: command
|
||||
goal_default:
|
||||
command: ''
|
||||
handles: []
|
||||
result:
|
||||
success: success
|
||||
schema:
|
||||
description: ''
|
||||
properties:
|
||||
feedback:
|
||||
properties:
|
||||
status:
|
||||
type: string
|
||||
required:
|
||||
- status
|
||||
title: SendCmd_Feedback
|
||||
type: object
|
||||
goal:
|
||||
properties:
|
||||
command:
|
||||
type: string
|
||||
required:
|
||||
- command
|
||||
title: SendCmd_Goal
|
||||
type: object
|
||||
result:
|
||||
properties:
|
||||
return_info:
|
||||
type: string
|
||||
success:
|
||||
type: boolean
|
||||
required:
|
||||
- return_info
|
||||
- success
|
||||
title: SendCmd_Result
|
||||
type: object
|
||||
required:
|
||||
- goal
|
||||
title: SendCmd
|
||||
type: object
|
||||
type: SendCmd
|
||||
module: unilabos.devices.raman_uv.home_made_raman:RamanObj
|
||||
status_types: {}
|
||||
type: python
|
||||
config_info: []
|
||||
description: 拉曼光谱分析设备，用于物质的分子结构和化学成分表征。该设备集成激光器和CCD检测器，通过串口通信控制激光功率和光谱采集。具备背景扣除、多次平均、自动数据处理等功能，支持高精度的拉曼光谱测量。适用于材料表征、化学分析、质量控制、研究开发等需要分子指纹识别和结构分析的实验应用。
|
||||
handles: []
|
||||
icon: ''
|
||||
init_param_schema:
|
||||
config:
|
||||
properties:
|
||||
baudrate_ccd:
|
||||
default: 921600
|
||||
type: string
|
||||
baudrate_laser:
|
||||
default: 9600
|
||||
type: string
|
||||
port_ccd:
|
||||
type: string
|
||||
port_laser:
|
||||
type: string
|
||||
required:
|
||||
- port_laser
|
||||
- port_ccd
|
||||
type: object
|
||||
data:
|
||||
properties: {}
|
||||
required: []
|
||||
type: object
|
||||
version: 1.0.0
|
||||
{}
|
||||
|
||||
@@ -822,171 +822,3 @@ linear_motion.toyo_xyz.sim:
|
||||
mesh: toyo_xyz
|
||||
type: device
|
||||
version: 1.0.0
|
||||
motor.iCL42:
|
||||
category:
|
||||
- robot_linear_motion
|
||||
class:
|
||||
action_value_mappings:
|
||||
auto-execute_run_motor:
|
||||
feedback: {}
|
||||
goal: {}
|
||||
goal_default:
|
||||
mode: null
|
||||
position: null
|
||||
velocity: null
|
||||
handles: []
|
||||
result: {}
|
||||
schema:
|
||||
description: 步进电机执行运动函数。直接执行电机运动命令，包括位置设定、速度控制和路径规划。该函数处理底层的电机控制协议，消除警告信息，设置运动参数并启动电机运行。适用于需要直接控制电机运动的应用场景。
|
||||
properties:
|
||||
feedback: {}
|
||||
goal:
|
||||
properties:
|
||||
mode:
|
||||
type: string
|
||||
position:
|
||||
type: number
|
||||
velocity:
|
||||
type: integer
|
||||
required:
|
||||
- mode
|
||||
- position
|
||||
- velocity
|
||||
type: object
|
||||
result: {}
|
||||
required:
|
||||
- goal
|
||||
title: execute_run_motor参数
|
||||
type: object
|
||||
type: UniLabJsonCommand
|
||||
auto-init_device:
|
||||
feedback: {}
|
||||
goal: {}
|
||||
goal_default: {}
|
||||
handles: []
|
||||
result: {}
|
||||
schema:
|
||||
description: iCL42电机设备初始化函数。建立与iCL42步进电机驱动器的串口通信连接，配置通信参数包括波特率、数据位、校验位等。该函数是电机使用前的必要步骤，确保驱动器处于可控状态并准备接收运动指令。
|
||||
properties:
|
||||
feedback: {}
|
||||
goal:
|
||||
properties: {}
|
||||
required: []
|
||||
type: object
|
||||
result: {}
|
||||
required:
|
||||
- goal
|
||||
title: init_device参数
|
||||
type: object
|
||||
type: UniLabJsonCommand
|
||||
auto-run_motor:
|
||||
feedback: {}
|
||||
goal: {}
|
||||
goal_default:
|
||||
mode: null
|
||||
position: null
|
||||
velocity: null
|
||||
handles: []
|
||||
result: {}
|
||||
schema:
|
||||
description: 步进电机运动控制函数。根据指定的运动模式、目标位置和速度参数控制电机运动。支持多种运动模式和精确的位置控制，自动处理运动轨迹规划和执行。该函数提供异步执行和状态反馈，确保运动的准确性和可靠性。
|
||||
properties:
|
||||
feedback: {}
|
||||
goal:
|
||||
properties:
|
||||
mode:
|
||||
type: string
|
||||
position:
|
||||
type: number
|
||||
velocity:
|
||||
type: integer
|
||||
required:
|
||||
- mode
|
||||
- position
|
||||
- velocity
|
||||
type: object
|
||||
result: {}
|
||||
required:
|
||||
- goal
|
||||
title: run_motor参数
|
||||
type: object
|
||||
type: UniLabJsonCommand
|
||||
execute_command_from_outer:
|
||||
feedback: {}
|
||||
goal:
|
||||
command: command
|
||||
goal_default:
|
||||
command: ''
|
||||
handles: []
|
||||
result:
|
||||
success: success
|
||||
schema:
|
||||
description: ''
|
||||
properties:
|
||||
feedback:
|
||||
properties:
|
||||
status:
|
||||
type: string
|
||||
required:
|
||||
- status
|
||||
title: SendCmd_Feedback
|
||||
type: object
|
||||
goal:
|
||||
properties:
|
||||
command:
|
||||
type: string
|
||||
required:
|
||||
- command
|
||||
title: SendCmd_Goal
|
||||
type: object
|
||||
result:
|
||||
properties:
|
||||
return_info:
|
||||
type: string
|
||||
success:
|
||||
type: boolean
|
||||
required:
|
||||
- return_info
|
||||
- success
|
||||
title: SendCmd_Result
|
||||
type: object
|
||||
required:
|
||||
- goal
|
||||
title: SendCmd
|
||||
type: object
|
||||
type: SendCmd
|
||||
module: unilabos.devices.motor.iCL42:iCL42Driver
|
||||
status_types:
|
||||
is_executing_run: bool
|
||||
motor_position: int
|
||||
success: bool
|
||||
type: python
|
||||
config_info: []
|
||||
description: iCL42步进电机驱动器，用于实验室设备的精密线性运动控制。该设备通过串口通信控制iCL42型步进电机驱动器，支持多种运动模式和精确的位置、速度控制。具备位置反馈、运行状态监控和故障检测功能。适用于自动进样器、样品传送、精密定位平台等需要准确线性运动控制的实验室自动化设备。
|
||||
handles: []
|
||||
icon: ''
|
||||
init_param_schema:
|
||||
config:
|
||||
properties:
|
||||
device_address:
|
||||
default: 1
|
||||
type: integer
|
||||
device_com:
|
||||
default: COM9
|
||||
type: string
|
||||
required: []
|
||||
type: object
|
||||
data:
|
||||
properties:
|
||||
is_executing_run:
|
||||
type: boolean
|
||||
motor_position:
|
||||
type: integer
|
||||
success:
|
||||
type: boolean
|
||||
required:
|
||||
- motor_position
|
||||
- is_executing_run
|
||||
- success
|
||||
type: object
|
||||
version: 1.0.0
|
||||
|
||||
@@ -1071,8 +1071,8 @@ virtual_filter:
|
||||
- status
|
||||
- progress
|
||||
- current_temp
|
||||
- filtered_volume
|
||||
- current_status
|
||||
- filtered_volume
|
||||
- message
|
||||
- max_temp
|
||||
- max_stir_speed
|
||||
@@ -4704,6 +4704,7 @@ virtual_stirrer:
|
||||
status_types:
|
||||
current_speed: float
|
||||
current_vessel: str
|
||||
device_info: dict
|
||||
is_stirring: bool
|
||||
max_speed: float
|
||||
min_speed: float
|
||||
@@ -4738,6 +4739,8 @@ virtual_stirrer:
|
||||
type: number
|
||||
current_vessel:
|
||||
type: string
|
||||
device_info:
|
||||
type: object
|
||||
is_stirring:
|
||||
type: boolean
|
||||
max_speed:
|
||||
@@ -4759,6 +4762,7 @@ virtual_stirrer:
|
||||
- remaining_time
|
||||
- max_speed
|
||||
- min_speed
|
||||
- device_info
|
||||
type: object
|
||||
version: 1.0.0
|
||||
virtual_transfer_pump:
|
||||
|
||||
@@ -6146,26 +6146,6 @@ workstation.example:
|
||||
- work_station
|
||||
class:
|
||||
action_value_mappings:
|
||||
auto-append_resource:
|
||||
feedback: {}
|
||||
goal: {}
|
||||
goal_default: {}
|
||||
handles: []
|
||||
result: {}
|
||||
schema:
|
||||
description: ''
|
||||
properties:
|
||||
feedback: {}
|
||||
goal:
|
||||
properties: {}
|
||||
required: []
|
||||
type: object
|
||||
result: {}
|
||||
required:
|
||||
- goal
|
||||
title: append_resource参数
|
||||
type: object
|
||||
type: UniLabJsonCommand
|
||||
auto-create_resource:
|
||||
feedback: {}
|
||||
goal: {}
|
||||
@@ -6218,6 +6198,62 @@ workstation.example:
|
||||
title: create_resource参数
|
||||
type: object
|
||||
type: UniLabJsonCommand
|
||||
auto-transfer_bottle:
|
||||
feedback: {}
|
||||
goal: {}
|
||||
goal_default:
|
||||
base_plate: null
|
||||
tip_rack: null
|
||||
handles: []
|
||||
result: {}
|
||||
schema:
|
||||
description: ''
|
||||
properties:
|
||||
feedback: {}
|
||||
goal:
|
||||
properties:
|
||||
base_plate:
|
||||
type: string
|
||||
tip_rack:
|
||||
type: string
|
||||
required:
|
||||
- tip_rack
|
||||
- base_plate
|
||||
type: object
|
||||
result: {}
|
||||
required:
|
||||
- goal
|
||||
title: transfer_bottle参数
|
||||
type: object
|
||||
type: UniLabJsonCommand
|
||||
auto-trigger_resource_update:
|
||||
feedback: {}
|
||||
goal: {}
|
||||
goal_default:
|
||||
from_plate: null
|
||||
to_base_plate: null
|
||||
handles: []
|
||||
result: {}
|
||||
schema:
|
||||
description: ''
|
||||
properties:
|
||||
feedback: {}
|
||||
goal:
|
||||
properties:
|
||||
from_plate:
|
||||
type: string
|
||||
to_base_plate:
|
||||
type: string
|
||||
required:
|
||||
- from_plate
|
||||
- to_base_plate
|
||||
type: object
|
||||
result: {}
|
||||
required:
|
||||
- goal
|
||||
title: trigger_resource_update参数
|
||||
type: object
|
||||
type: UniLabJsonCommand
|
||||
module: unilabos.ros.nodes.presets.workstation:WorkStationExample
|
||||
status_types: {}
|
||||
type: ros2
|
||||
|
||||
Reference in New Issue
Block a user