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37-biomek-i5i7 (#40)
* add biomek.py demo implementation * 更新LiquidHandlerBiomek类,添加资源创建功能,优化协议创建方法,修复部分代码格式问题,更新YAML配置以支持新功能。 * Test * fix biomek success type * Convert LH action to biomek. * Update biomek.py * 注册表上报handle和schema (param input) * 修复biomek缺少的字段 * delete 's' * Remove warnings * Update biomek.py * Biomek test * Update biomek.py * 新增transfer_biomek的msg * New transfer_biomek * Updated transfer_biomek * 更新transfer_biomek的msg * 更新transfer_biomek的msg * 支持Biomek创建 * new action * fix key name typo * New parameter for biomek to run. * Refine * Update * new actions * new actions * 1 * registry * fix biomek startup add action handles * fix handles not as default entry * biomek_test.py biomek_test.py是最新的版本,运行它会生成complete_biomek_protocol.json * Update biomek.py * biomek_test.py * fix liquid_handler.biomek handles * host node新增resource add时间统计 create_resource新增handle bump version to 0.9.2 * 修正物料上传时间 改用biomek_test 增加ResultInfoEncoder 支持返回结果上传 * 正确发送return_info结果 * 同步执行状态信息 * 取消raiseValueError提示 * Update biomek_test.py * 0608 DONE * 同步了Biomek.py 现在应可用 * biomek switch back to non-test * temp disable initialize resource * Refine biomek * Refine copy issue * Refine --------- Co-authored-by: Junhan Chang <changjh@pku.edu.cn> Co-authored-by: Guangxin Zhang <guangxin.zhang.bio@gmail.com> Co-authored-by: qxw138 <qxw@stu.pku.edu.cn>
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@@ -1,6 +1,7 @@
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import json
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import time
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import traceback
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from typing import Optional
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import uuid
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import paho.mqtt.client as mqtt
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@@ -163,10 +164,12 @@ class MQTTClient:
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self.client.publish(address, json.dumps(status), qos=2)
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logger.critical(f"Device status published: address: {address}, {status}")
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def publish_job_status(self, feedback_data: dict, job_id: str, status: str):
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def publish_job_status(self, feedback_data: dict, job_id: str, status: str, return_info: Optional[str] = None):
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if self.mqtt_disable:
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return
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jobdata = {"job_id": job_id, "data": feedback_data, "status": status}
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if return_info is None:
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return_info = "{}"
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jobdata = {"job_id": job_id, "data": feedback_data, "status": status, "return_info": return_info}
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self.client.publish(f"labs/{MQConfig.lab_id}/job/list/", json.dumps(jobdata), qos=2)
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def publish_registry(self, device_id: str, device_info: dict):
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