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Update workstation.
modify workstation_architecture docs bioyond_HR (#133) * feat: Enhance Bioyond synchronization and resource management - Implemented synchronization for all material types (consumables, samples, reagents) from Bioyond, logging detailed information for each type. - Improved error handling and logging during synchronization processes. - Added functionality to save Bioyond material IDs in UniLab resources for future updates. - Enhanced the `sync_to_external` method to handle material movements correctly, including querying and creating materials in Bioyond. - Updated warehouse configurations to support new storage types and improved layout for better resource management. - Introduced new resource types such as reactors and tip boxes, with detailed specifications. - Modified warehouse factory to support column offsets for naming conventions (e.g., A05-D08). - Improved resource tracking by merging extra attributes instead of overwriting them. - Added a new method for updating resources in Bioyond, ensuring better synchronization of resource changes. * feat: 添加TipBox和Reactor的配置到bottles.yaml * fix: 修复液体投料方法中的volume参数处理逻辑 修复solid_feeding_vials方法中的volume参数处理逻辑，优化solvents参数的使用条件 更新液体投料方法，支持通过溶剂信息自动计算体积，添加solvents参数并更新文档描述 Add batch creation methods for vial and solution tasks 添加批量创建90%10%小瓶投料任务和二胺溶液配置任务的功能，更新相关参数和默认值
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@@ -5,6 +5,157 @@ bioyond_dispensing_station:
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- bioyond_dispensing_station
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class:
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action_value_mappings:
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batch_create_90_10_vial_feeding_tasks:
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feedback: {}
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goal:
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delay_time: delay_time
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hold_m_name: hold_m_name
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liquid_material_name: liquid_material_name
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speed: speed
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temperature: temperature
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titration: titration
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goal_default:
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delay_time: '600'
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hold_m_name: ''
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liquid_material_name: NMP
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speed: '400'
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temperature: '40'
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titration: ''
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handles:
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input:
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- data_key: titration
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data_source: handle
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data_type: object
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handler_key: titration
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io_type: source
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label: Titration Data From Calculation Node
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result:
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return_info: return_info
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schema:
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description: 批量创建90%10%小瓶投料任务。从计算节点接收titration数据,包含物料名称、主称固体质量、滴定固体质量和滴定溶剂体积。
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properties:
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feedback:
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properties: {}
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required: []
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title: BatchCreate9010VialFeedingTasks_Feedback
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type: object
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goal:
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properties:
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delay_time:
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default: '600'
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description: 延迟时间(秒),默认600
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type: string
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hold_m_name:
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description: 库位名称,如"C01",必填参数
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type: string
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liquid_material_name:
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default: NMP
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description: 10%物料的液体物料名称,默认为"NMP"
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type: string
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speed:
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default: '400'
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description: 搅拌速度,默认400
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type: string
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temperature:
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default: '40'
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description: 温度(℃),默认40
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type: string
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titration:
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description: '滴定信息对象,包含: name(物料名称), main_portion(主称固体质量g), titration_portion(滴定固体质量g),
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titration_solvent(滴定溶液体积mL)'
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type: string
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required:
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- titration
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- hold_m_name
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title: BatchCreate9010VialFeedingTasks_Goal
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type: object
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result:
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properties:
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return_info:
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type: string
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required:
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- return_info
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title: BatchCreate9010VialFeedingTasks_Result
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type: object
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required:
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- goal
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title: BatchCreate9010VialFeedingTasks
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type: object
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type: UniLabJsonCommand
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batch_create_diamine_solution_tasks:
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feedback: {}
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goal:
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delay_time: delay_time
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liquid_material_name: liquid_material_name
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solutions: solutions
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speed: speed
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temperature: temperature
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goal_default:
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delay_time: '600'
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liquid_material_name: NMP
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solutions: ''
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speed: '400'
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temperature: '20'
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handles:
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input:
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- data_key: solutions
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data_source: handle
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data_type: array
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handler_key: solutions
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io_type: source
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label: Solution Data From Python
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result:
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return_info: return_info
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schema:
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description: 批量创建二胺溶液配置任务。自动为多个二胺样品创建溶液配置任务，每个任务包含固体物料称量、溶剂添加、搅拌混合等步骤。
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properties:
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feedback:
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properties: {}
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required: []
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title: BatchCreateDiamineSolutionTasks_Feedback
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type: object
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goal:
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properties:
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delay_time:
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default: '600'
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description: 溶液配置完成后的延迟时间（秒），用于充分混合和溶解，默认600秒
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type: string
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liquid_material_name:
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default: NMP
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description: 液体溶剂名称，用于溶解固体物料，默认为NMP（N-甲基吡咯烷酮）
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type: string
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solutions:
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description: '溶液列表，JSON数组格式，每个元素包含: name(物料名称), order(序号), solid_mass(固体质量g),
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solvent_volume(溶剂体积mL)。示例: [{"name": "MDA", "order": 0, "solid_mass":
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5.0, "solvent_volume": 20}, {"name": "MPDA", "order": 1, "solid_mass":
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4.5, "solvent_volume": 18}]'
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type: string
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speed:
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default: '400'
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description: 搅拌速度（rpm），用于混合溶液，默认400转/分钟
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type: string
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temperature:
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default: '20'
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description: 配置温度（℃），溶液配置过程的目标温度，默认20℃（室温）
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type: string
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required:
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- solutions
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title: BatchCreateDiamineSolutionTasks_Goal
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type: object
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result:
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properties:
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return_info:
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description: 批量任务创建结果汇总，JSON格式包含总数、成功数、失败数及每个任务的详细信息
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type: string
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required:
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- return_info
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title: BatchCreateDiamineSolutionTasks_Result
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type: object
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required:
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- goal
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title: BatchCreateDiamineSolutionTasks
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type: object
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type: UniLabJsonCommand
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create_90_10_vial_feeding_task:
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feedback: {}
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goal:
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@@ -120,6 +120,7 @@ reaction_station.bioyond:
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feedback: {}
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goal:
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assign_material_name: assign_material_name
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solvents: solvents
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temperature: temperature
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time: time
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titration_type: titration_type
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@@ -127,15 +128,23 @@ reaction_station.bioyond:
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volume: volume
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goal_default:
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assign_material_name: ''
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temperature: ''
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time: ''
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titration_type: ''
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torque_variation: ''
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solvents: ''
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temperature: '25.00'
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time: '360'
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titration_type: '1'
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torque_variation: '2'
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volume: ''
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handles: {}
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handles:
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input:
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- data_key: solvents
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data_source: handle
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data_type: object
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handler_key: solvents
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io_type: source
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label: Solvents Data From Calculation Node
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result: {}
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schema:
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description: 液体投料-溶剂
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description: 液体投料-溶剂。可以直接提供volume(μL),或通过solvents对象自动从additional_solvent(mL)计算volume。
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properties:
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feedback: {}
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goal:
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@@ -143,28 +152,30 @@ reaction_station.bioyond:
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assign_material_name:
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description: 物料名称
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type: string
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solvents:
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description: '溶剂信息对象(可选),包含: additional_solvent(溶剂体积mL), total_liquid_volume(总液体体积mL)。如果提供,将自动计算volume'
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type: string
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temperature:
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description: 温度设定(°C)
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default: '25.00'
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description: 温度设定(°C),默认25.00
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type: string
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time:
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description: 观察时间(分钟)
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default: '360'
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description: 观察时间(分钟),默认360
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type: string
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titration_type:
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description: 是否滴定(1=否, 2=是)
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default: '1'
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description: 是否滴定(1=否, 2=是),默认1
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type: string
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torque_variation:
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description: 是否观察 (1=否, 2=是)
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default: '2'
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description: 是否观察 (1=否, 2=是),默认2
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type: string
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volume:
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description: 分液公式(μL)
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description: 分液量(μL)。可直接提供,或通过solvents参数自动计算
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type: string
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required:
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- volume
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- assign_material_name
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- time
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- torque_variation
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- titration_type
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- temperature
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type: object
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result: {}
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required:
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