From acbaff7bb757323667fbaa79afe248b8255ad8d8 Mon Sep 17 00:00:00 2001 From: shuchang Date: Tue, 23 Dec 2025 15:08:04 +0800 Subject: [PATCH] prcxi resource (#202) * prcxi resource * prcxi_resource * Fix upload error not showing. Support str type category. --------- Co-authored-by: Xuwznln <18435084+Xuwznln@users.noreply.github.com> --- .../liquid_handling/prcxi/base_material.json | 954 + .../devices/liquid_handling/prcxi/deck.json | 35 +- .../prcxi/json_output/CodeDataEntity.json | 1 + .../prcxi/json_output/CurveCompensate.json | 607 + .../_base_material_old_20240226.json | 794 + .../_base_plan_detail_old_20240416.json | 34346 +++ .../_base_plan_master_old_20240416.json | 602 + ...se_plate_position_detail_old_20240221.json | 302 + .../prcxi/json_output/base_arm_model.json | 74 + .../prcxi/json_output/base_layout_detail.json | 10 + .../prcxi/json_output/base_layout_master.json | 20 + .../prcxi/json_output/base_plan_detail.json | 180578 +++++++++++++++ .../prcxi/json_output/base_plan_master.json | 3682 + .../json_output/base_plate_position.json | 98 + .../base_plate_position_detail.json | 872 + .../json_output/base_process_detail.json | 1 + .../json_output/base_process_master.json | 1 + .../prcxi/json_output/base_qrcode.json | 58 + .../prcxi/json_output/sys_role.json | 22 + .../prcxi/json_output/sys_user.json | 54 + .../devices/liquid_handling/prcxi/prcxi.py | 333 +- .../liquid_handling/prcxi/prcxi_labware.py | 841 + .../liquid_handling/prcxi/prcxi_material.json | 31 - .../liquid_handling/prcxi/prcxi_materials.py | 21 - .../liquid_handling/prcxi/prcxi_res.py | 44 - .../resources/prcxi/plate_adapters.yaml | 108 + unilabos/registry/resources/prcxi/plates.yaml | 130 +- .../registry/resources/prcxi/tip_racks.yaml | 81 +- unilabos/registry/resources/prcxi/trash.yaml | 10 +- .../registry/resources/prcxi/tube_racks.yaml | 12 + unilabos/resources/plr_additional_res_reg.py | 6 +- unilabos/test/experiments/prcxi_9300.json | 10 +- 32 files changed, 224537 insertions(+), 201 deletions(-) create mode 100644 unilabos/devices/liquid_handling/prcxi/base_material.json create mode 100644 unilabos/devices/liquid_handling/prcxi/json_output/CodeDataEntity.json create mode 100644 unilabos/devices/liquid_handling/prcxi/json_output/CurveCompensate.json create mode 100644 unilabos/devices/liquid_handling/prcxi/json_output/_base_material_old_20240226.json create mode 100644 unilabos/devices/liquid_handling/prcxi/json_output/_base_plan_detail_old_20240416.json create mode 100644 unilabos/devices/liquid_handling/prcxi/json_output/_base_plan_master_old_20240416.json create mode 100644 unilabos/devices/liquid_handling/prcxi/json_output/_base_plate_position_detail_old_20240221.json create mode 100644 unilabos/devices/liquid_handling/prcxi/json_output/base_arm_model.json create mode 100644 unilabos/devices/liquid_handling/prcxi/json_output/base_layout_detail.json create mode 100644 unilabos/devices/liquid_handling/prcxi/json_output/base_layout_master.json create mode 100644 unilabos/devices/liquid_handling/prcxi/json_output/base_plan_detail.json create mode 100644 unilabos/devices/liquid_handling/prcxi/json_output/base_plan_master.json create mode 100644 unilabos/devices/liquid_handling/prcxi/json_output/base_plate_position.json create mode 100644 unilabos/devices/liquid_handling/prcxi/json_output/base_plate_position_detail.json create mode 100644 unilabos/devices/liquid_handling/prcxi/json_output/base_process_detail.json create mode 100644 unilabos/devices/liquid_handling/prcxi/json_output/base_process_master.json create mode 100644 unilabos/devices/liquid_handling/prcxi/json_output/base_qrcode.json create mode 100644 unilabos/devices/liquid_handling/prcxi/json_output/sys_role.json create mode 100644 unilabos/devices/liquid_handling/prcxi/json_output/sys_user.json create mode 100644 unilabos/devices/liquid_handling/prcxi/prcxi_labware.py delete mode 100644 unilabos/devices/liquid_handling/prcxi/prcxi_material.json delete mode 100644 unilabos/devices/liquid_handling/prcxi/prcxi_materials.py delete mode 100644 unilabos/devices/liquid_handling/prcxi/prcxi_res.py create mode 100644 unilabos/registry/resources/prcxi/plate_adapters.yaml create mode 100644 unilabos/registry/resources/prcxi/tube_racks.yaml diff --git a/unilabos/devices/liquid_handling/prcxi/base_material.json b/unilabos/devices/liquid_handling/prcxi/base_material.json new file mode 100644 index 0000000..1206b20 --- /dev/null +++ b/unilabos/devices/liquid_handling/prcxi/base_material.json @@ -0,0 +1,954 @@ +[ + { + "uuid": "3b6f33ffbf734014bcc20e3c63e124d4", + "Code": "ZX-58-1250", + "Name": "Tip头适配器 1250uL", + "SummaryName": "Tip头适配器 1250uL", + "SupplyType": 2, + "Factory": "宁静致远", + "LengthNum": 128, + "WidthNum": 85, + "HeightNum": 20, + "DepthNum": 4, + "StandardHeight": 0, + "PipetteHeight": null, + "HoleColum": 1, + "HoleRow": 1, + "HoleDiameter": 0, + "Volume": 1250, + "ImagePath": "/images/20220624015044.jpg", + "QRCode": null, + "Qty": 10, + "CreateName": null, + "CreateTime": "2021-12-30 16:03:52.6583727", + "UpdateName": null, + "UpdateTime": "2022-06-24 13:50:44.8123474", + "IsStright": 0, + "IsGeneral": 0, + "IsControl": 1, + "ArmCode": null, + "XSpacing": null, + "YSpacing": null, + "materialEnum": null, + "Margins_X": 0, + "Margins_Y": 0 + }, + { + "uuid": "7c822592b360451fb59690e49ac6b181", + "Code": "ZX-58-300", + "Name": "ZHONGXI 适配器 300uL", + "SummaryName": "ZHONGXI 适配器 300uL", + "SupplyType": 2, + "Factory": "宁静致远", + "LengthNum": 127, + "WidthNum": 85, + "HeightNum": 81, + "DepthNum": 4, + "StandardHeight": 0, + "PipetteHeight": null, + "HoleColum": 1, + "HoleRow": 1, + "HoleDiameter": 0, + "Volume": 300, + "ImagePath": "/images/20220623102838.jpg", + "QRCode": null, + "Qty": 10, + "CreateName": null, + "CreateTime": "2021-12-30 16:07:53.7453351", + "UpdateName": null, + "UpdateTime": "2022-06-23 10:28:38.6190575", + "IsStright": 0, + "IsGeneral": 0, + "IsControl": 1, + "ArmCode": null, + "XSpacing": null, + "YSpacing": null, + "materialEnum": null, + "Margins_X": 0, + "Margins_Y": 0 + }, + { + "uuid": "8cc3dce884ac41c09f4570d0bcbfb01c", + "Code": "ZX-58-10", + "Name": "吸头10ul 适配器", + "SummaryName": "吸头10ul 适配器", + "SupplyType": 2, + "Factory": "宁静致远", + "LengthNum": 128, + "WidthNum": 85, + "HeightNum": 72.3, + "DepthNum": 0, + "StandardHeight": 0, + "PipetteHeight": 0, + "HoleColum": 1, + "HoleRow": 1, + "HoleDiameter": 127, + "Volume": 1000, + "ImagePath": "", + "QRCode": null, + "Qty": 10, + "CreateName": null, + "CreateTime": "2021-12-30 16:37:40.7073733", + "UpdateName": null, + "UpdateTime": "2025-05-30 15:17:01.8231737", + "IsStright": 0, + "IsGeneral": 1, + "IsControl": 1, + "ArmCode": null, + "XSpacing": 0, + "YSpacing": 0, + "materialEnum": 0, + "Margins_X": 0, + "Margins_Y": 0 + }, + { + "uuid": "7960f49ddfe9448abadda89bd1556936", + "Code": "ZX-001-1250", + "Name": "1250μL Tip头", + "SummaryName": "1250μL Tip头", + "SupplyType": 1, + "Factory": "宁静致远", + "LengthNum": 118.09, + "WidthNum": 80.7, + "HeightNum": 107.67, + "DepthNum": 100, + "StandardHeight": 0, + "PipetteHeight": null, + "HoleColum": 12, + "HoleRow": 8, + "HoleDiameter": 7.95, + "Volume": 1250, + "ImagePath": "/images/20220623102536.jpg", + "QRCode": null, + "Qty": 96, + "CreateName": null, + "CreateTime": "2021-12-30 20:53:27.8591195", + "UpdateName": null, + "UpdateTime": "2022-06-23 10:25:36.2592442", + "IsStright": 0, + "IsGeneral": 0, + "IsControl": 1, + "ArmCode": null, + "XSpacing": 9, + "YSpacing": 9, + "materialEnum": null, + "Margins_X": 0, + "Margins_Y": 0 + }, + { + "uuid": "45f2ed3ad925484d96463d675a0ebf66", + "Code": "ZX-001-10", + "Name": "10μL Tip头", + "SummaryName": "10μL Tip头", + "SupplyType": 1, + "Factory": "宁静致远", + "LengthNum": 120.98, + "WidthNum": 82.12, + "HeightNum": 67, + "DepthNum": 39.1, + "StandardHeight": 0, + "PipetteHeight": null, + "HoleColum": 12, + "HoleRow": 8, + "HoleDiameter": 5, + "Volume": 10, + "ImagePath": "/images/20221119041031.jpg", + "QRCode": null, + "Qty": -21, + "CreateName": null, + "CreateTime": "2021-12-30 20:56:53.462015", + "UpdateName": null, + "UpdateTime": "2022-11-19 16:10:31.126801", + "IsStright": 0, + "IsGeneral": 1, + "IsControl": 1, + "ArmCode": null, + "XSpacing": 9, + "YSpacing": 9, + "materialEnum": null, + "Margins_X": 0, + "Margins_Y": 0 + }, + { + "uuid": "068b3815e36b4a72a59bae017011b29f", + "Code": "ZX-001-10+", + "Name": "10μL加长 Tip头", + "SummaryName": "10μL加长 Tip头", + "SupplyType": 1, + "Factory": "宁静致远", + "LengthNum": 122.11, + "WidthNum": 80.05, + "HeightNum": 58.23, + "DepthNum": 45.1, + "StandardHeight": 0, + "PipetteHeight": 60, + "HoleColum": 12, + "HoleRow": 8, + "HoleDiameter": 7, + "Volume": 10, + "ImagePath": "", + "QRCode": null, + "Qty": 42, + "CreateName": null, + "CreateTime": "2021-12-30 20:57:57.331211", + "UpdateName": null, + "UpdateTime": "2025-09-17 17:02:51.2070383", + "IsStright": 0, + "IsGeneral": 0, + "IsControl": 1, + "ArmCode": null, + "XSpacing": 9, + "YSpacing": 9, + "materialEnum": 1, + "Margins_X": 7.97, + "Margins_Y": 5 + }, + { + "uuid": "80652665f6a54402b2408d50b40398df", + "Code": "ZX-001-1000", + "Name": "1000μL Tip头", + "SummaryName": "1000μL Tip头", + "SupplyType": 1, + "Factory": "宁静致远", + "LengthNum": 128.09, + "WidthNum": 85.8, + "HeightNum": 98, + "DepthNum": 88, + "StandardHeight": 0, + "PipetteHeight": 100, + "HoleColum": 12, + "HoleRow": 8, + "HoleDiameter": 7.95, + "Volume": 1000, + "ImagePath": "", + "QRCode": null, + "Qty": 47, + "CreateName": null, + "CreateTime": "2021-12-30 20:59:20.5534915", + "UpdateName": null, + "UpdateTime": "2025-05-30 14:49:53.639727", + "IsStright": 0, + "IsGeneral": 0, + "IsControl": 1, + "ArmCode": null, + "XSpacing": 9, + "YSpacing": 9, + "materialEnum": 1, + "Margins_X": 14.5, + "Margins_Y": 11.4 + }, + { + "uuid": "076250742950465b9d6ea29a225dfb00", + "Code": "ZX-001-300", + "Name": "300μL Tip头", + "SummaryName": "300μL Tip头", + "SupplyType": 1, + "Factory": "宁静致远", + "LengthNum": 122.11, + "WidthNum": 80.05, + "HeightNum": 58.23, + "DepthNum": 45.1, + "StandardHeight": 0, + "PipetteHeight": 60, + "HoleColum": 12, + "HoleRow": 8, + "HoleDiameter": 7, + "Volume": 300, + "ImagePath": "", + 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"YSpacing": 9, + "materialEnum": 0, + "Margins_X": 0, + "Margins_Y": 0 + }, + { + "uuid": "73bb9b10bc394978b70e027bf45ce2d3", + "Code": "ZX-023-0.2", + "Name": "0.2ml PCR板", + "SummaryName": "0.2ml PCR板", + "SupplyType": 1, + "Factory": "中析", + "LengthNum": 126, + "WidthNum": 86, + "HeightNum": 21.2, + "DepthNum": 15.17, + "StandardHeight": 0, + "PipetteHeight": null, + "HoleColum": 12, + "HoleRow": 8, + "HoleDiameter": 6, + "Volume": 1000, + "ImagePath": "", + "QRCode": null, + "Qty": -12, + "CreateName": null, + "CreateTime": "2021-12-30 21:06:02.7746392", + "UpdateName": null, + "UpdateTime": "2024-02-20 16:17:16.7921748", + "IsStright": 0, + "IsGeneral": 1, + "IsControl": 1, + "ArmCode": null, + "XSpacing": 9, + "YSpacing": 9, + "materialEnum": null, + "Margins_X": 0, + "Margins_Y": 0 + }, + { + "uuid": "ca877b8b114a4310b429d1de4aae96ee", + "Code": "ZX-019-2.2", + "Name": "2.2ml 深孔板", + "SummaryName": "2.2ml 深孔板", + "SupplyType": 1, + "Factory": "宁静致远", + "LengthNum": 127.3, + 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+ "UpdateTime": "2023-08-12 13:10:38.5409878", + "IsStright": 0, + "IsGeneral": 0, + "IsControl": 0, + "ArmCode": null, + "XSpacing": 9, + "YSpacing": 9, + "materialEnum": null, + "Margins_X": 0, + "Margins_Y": 0 + }, + { + "uuid": "b01627718d3341aba649baa81c2c083c", + "Code": "Sd155", + "Name": "爱津", + "SummaryName": "爱津", + "SupplyType": 1, + "Factory": "中析", + "LengthNum": 125, + "WidthNum": 85, + "HeightNum": 64, + "DepthNum": 45.5, + "StandardHeight": 0, + "PipetteHeight": null, + "HoleColum": 12, + "HoleRow": 8, + "HoleDiameter": 4, + "Volume": 20, + "ImagePath": "", + "QRCode": null, + "Qty": null, + "CreateName": null, + "CreateTime": "2022-11-07 08:56:30.1794274", + "UpdateName": null, + "UpdateTime": "2022-11-07 09:00:29.5496845", + "IsStright": 0, + "IsGeneral": 1, + "IsControl": 0, + "ArmCode": null, + "XSpacing": null, + "YSpacing": null, + "materialEnum": null, + "Margins_X": 0, + "Margins_Y": 0 + }, + { + "uuid": "adfabfffa8f24af5abfbba67b8d0f973", + "Code": "Fhh478", + 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"IsGeneral": null, + "IsControl": null, + "ArmCode": null, + "XSpacing": 9, + "YSpacing": 9, + "materialEnum": 0, + "Margins_X": 0, + "Margins_Y": 0 + }, + { + "uuid": "b05b3b2aafd94ec38ea0cd3215ecea8f", + "Code": "ZX-78-096", + "Name": "细菌培养皿", + "SummaryName": "细菌培养皿", + "SupplyType": 1, + "Factory": "", + "LengthNum": 124.09, + "WidthNum": 81.89, + "HeightNum": 13.67, + "DepthNum": 11.2, + "StandardHeight": null, + "PipetteHeight": 0, + "HoleColum": 12, + "HoleRow": 8, + "HoleDiameter": 6.58, + "Volume": 78, + "ImagePath": null, + "QRCode": null, + "Qty": null, + "CreateName": null, + "CreateTime": "2025-09-17 17:10:54.1859566", + "UpdateName": null, + "UpdateTime": "2025-09-17 17:10:54.1859568", + "IsStright": null, + "IsGeneral": null, + "IsControl": null, + "ArmCode": null, + "XSpacing": 9, + "YSpacing": 9, + "materialEnum": 4, + "Margins_X": 9.28, + "Margins_Y": 6.19 + } +] \ No newline at end of file diff --git a/unilabos/devices/liquid_handling/prcxi/deck.json b/unilabos/devices/liquid_handling/prcxi/deck.json index bc52e1d..ab7e6e9 100644 --- a/unilabos/devices/liquid_handling/prcxi/deck.json +++ b/unilabos/devices/liquid_handling/prcxi/deck.json @@ -156,7 +156,7 @@ "z": 0 }, "config": { - "type": "PRCXI9300Container", + "type": "PRCXI9300TipRack", "size_x": 50, "size_y": 50, "size_z": 10, @@ -4323,7 +4323,7 @@ "z": 0 }, "config": { - "type": "PRCXI9300Container", + "type": "PRCXI9300Plate", "size_x": 50, "size_y": 50, "size_z": 10, @@ -8297,7 +8297,7 @@ "z": 0 }, "config": { - "type": "PRCXI9300Container", + "type": "PRCXI9300Plate", "size_x": 50, "size_y": 50, "size_z": 10, @@ -8425,7 +8425,7 @@ "z": 0 }, "config": { - "type": "PRCXI9300Container", + "type": "PRCXI9300Plate", "size_x": 50, "size_y": 50, "size_z": 10, @@ -12496,7 +12496,7 @@ "z": 0 }, "config": { - "type": "PRCXI9300Container", + "type": "PRCXI9300TipRack", "size_x": 50, "size_y": 50, "size_z": 10, @@ -16664,7 +16664,7 @@ "z": 0 }, "config": { - "type": "PRCXI9300Container", + "type": "PRCXI9300Plate", "size_x": 50, "size_y": 50, "size_z": 10, @@ -20640,7 +20640,7 @@ "z": 0 }, "config": { - "type": "PRCXI9300Container", + "type": "PRCXI9300Plate", "size_x": 50, "size_y": 50, "size_z": 10, @@ -20671,7 +20671,7 @@ "z": 0 }, "config": { - "type": "PRCXI9300Container", + "type": "PRCXI9300Plate", "size_x": 50, "size_y": 50, "size_z": 10, @@ -20799,7 +20799,7 @@ "z": 0 }, "config": { - "type": "PRCXI9300Container", + "type": "PRCXI9300Plate", "size_x": 50, "size_y": 50, "size_z": 10, @@ -24872,7 +24872,7 @@ "z": 0 }, "config": { - "type": "PRCXI9300Container", + "type": "PRCXI9300Plate", "size_x": 50, "size_y": 50, "size_z": 10, @@ -28848,7 +28848,7 @@ "z": 0 }, "config": { - "type": "PRCXI9300Container", + "type": "PRCXI9300Plate", "size_x": 50, "size_y": 50, "size_z": 10, @@ -28879,7 +28879,7 @@ "z": 0 }, "config": { - "type": "PRCXI9300Container", + "type": "PRCXI9300Plate", "size_x": 50, "size_y": 50, "size_z": 10, @@ -29007,7 +29007,7 @@ "z": 0 }, "config": { - "type": "PRCXI9300Container", + "type": "PRCXI9300Plate", "size_x": 50, "size_y": 50, "size_z": 10, @@ -33080,7 +33080,7 @@ "z": 0 }, "config": { - "type": "PRCXI9300Container", + "type": "PRCXI9300Plate", "size_x": 50, "size_y": 50, "size_z": 10, @@ -37153,7 +37153,7 @@ "z": 0 }, "config": { - "type": "PRCXI9300Container", + "type": "PRCXI9300Plate", "size_x": 50, "size_y": 50, "size_z": 10, @@ -41151,6 +41151,5 @@ "uuid": "730067cf07ae43849ddf4034299030e9" } } - ], - "links": [] -} \ No newline at end of file + } +] \ No newline at end of file diff --git a/unilabos/devices/liquid_handling/prcxi/json_output/CodeDataEntity.json b/unilabos/devices/liquid_handling/prcxi/json_output/CodeDataEntity.json new file mode 100644 index 0000000..0637a08 --- /dev/null +++ b/unilabos/devices/liquid_handling/prcxi/json_output/CodeDataEntity.json @@ -0,0 +1 @@ +[] \ No newline at end of file diff --git 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a/unilabos/devices/liquid_handling/prcxi/json_output/base_qrcode.json b/unilabos/devices/liquid_handling/prcxi/json_output/base_qrcode.json new file mode 100644 index 0000000..5f1b618 --- /dev/null +++ b/unilabos/devices/liquid_handling/prcxi/json_output/base_qrcode.json @@ -0,0 +1,58 @@ +[ + { + "uuid": "4034fa042e7f418db42ab80b0044a8cd", + "Code": "MDHC-001-10", + "Key": "c28ae2cb", + "Value": "MDHC-001-1000522001001612db9dc", + "CreateTime": "2022-01-22 17:07:00.8651386" + }, + { + "uuid": "8fb6d7589fdd42df93c1e1989ff13a62", + "Code": "MDHC-001-10", + "Key": "52980979", + "Value": "MDHC-001-100052200100119bb6731", + "CreateTime": "2022-01-22 20:19:20.9444209" + }, + { + "uuid": "efc4c92b40a94de6b0662c64486c18d1", + "Code": "MDHC-001-10", + "Key": "79da8402", + "Value": "MDHC-001-1000522001001e24ea780", + "CreateTime": "2022-01-22 20:19:26.8107506" + }, + { + "uuid": "3b81b1a9eabc4449b4dcbbbde47cb17f", + "Code": "MDHC-001-10", + "Key": "daa51755", + "Value": "MDHC-001-100052200100185dd22e2", + "CreateTime": "2022-01-22 20:19:36.1581374" + }, + { + "uuid": "d005a70801544e42ab9d216ad68dbf50", + "Code": "MDHC-023-0.2", + "Key": "992bbdab", + "Value": "MDHC-023-0.2005220010014871a385", + "CreateTime": "2022-02-16 15:49:53.760377" + }, + { + "uuid": "222315afb8e04320b0fcff10e3ddb8ae", + "Code": "MDHC-023-0.2", + "Key": "76d23270", + "Value": "MDHC-023-0.200522001001e61547ee", + "CreateTime": "2022-02-16 15:50:05.1932055" + }, + { + "uuid": "31e2a5d4f884419aa9ba96cef98b7385", + "Code": "MDHC-023-0.2", + "Key": "ba2b8a46", + "Value": "MDHC-023-0.2005220010013bfed6cf", + "CreateTime": "2022-02-16 17:26:20.0024235" + }, + { + "uuid": "9ccb8e0c5ca64ef09b8aced680395335", + "Code": "MDHC-023-0.2", + "Key": "1d1276d0", + "Value": "MDHC-023-0.2005220010015c039a9c", + "CreateTime": "2022-02-16 17:26:31.8479966" + } +] \ No newline at end of file diff --git a/unilabos/devices/liquid_handling/prcxi/json_output/sys_role.json b/unilabos/devices/liquid_handling/prcxi/json_output/sys_role.json new file mode 100644 index 0000000..8fd51b2 --- /dev/null +++ b/unilabos/devices/liquid_handling/prcxi/json_output/sys_role.json @@ -0,0 +1,22 @@ +[ + { + "uuid": "f3932aeae93533f19c0519c4c14702aa", + "RoleCode": "admin", + "RoleName": "管理员", + "RoleMenu": "all", + "CreateTime": "2022-02-26 00:00:00.000", + "CreateName": "admin", + "UpdateTime": "2022-02-26 14:50:10.000", + "UpdateName": "admin" + }, + { + "uuid": "8c822592b360345fb59690e49ac6b181", + "RoleCode": "user", + "RoleName": "实验员", + "RoleMenu": "nosetting", + "CreateTime": "2022-02-26 14:54:16.000", + "CreateName": "admin", + "UpdateTime": "2022-02-26 14:54:19.000", + "UpdateName": "admin" + } +] \ No newline at end of file diff --git a/unilabos/devices/liquid_handling/prcxi/json_output/sys_user.json b/unilabos/devices/liquid_handling/prcxi/json_output/sys_user.json new file mode 100644 index 0000000..ee4422f --- /dev/null +++ b/unilabos/devices/liquid_handling/prcxi/json_output/sys_user.json @@ -0,0 +1,54 @@ +[ + { + "uuid": "f3932aeae93533f19c0519c4c14702dd", + "UserName": "admin", + "Password": "NuGlByx4NZBm7XcV9f89qA==", + "RealName": "管理员", + "IsEnable": 1, + "uuidRole": "f3932aeae93533f19c0519c4c14702aa", + "IsDel": 0, + "CreateTime": "2022-02-26 14:51:41.000", + "CreateName": "admin", + "UpdateTime": "2022-02-26 14:51:49.000", + "UpdateName": "admin" + }, + { + "uuid": "5c522592b366645fb55690e49ac6b166", + "UserName": "user", + "Password": "4QrcOUm6Wau+VuBX8g+IPg==", + "RealName": "实验员", + "IsEnable": 1, + "uuidRole": "8c822592b360345fb59690e49ac6b181", + "IsDel": 0, + "CreateTime": "2022-02-26 14:56:57.000", + "CreateName": "admin", + "UpdateTime": "2022-02-26 14:58:39.000", + "UpdateName": "admin" + }, + { + "uuid": "ju0514zjhi9267mz8s0buspq8b9s0bgb", + "UserName": "Administrator", + "Password": "3J17Il4KOR+wKPszf/0cHQ==", + "RealName": "超级管理员", + "IsEnable": 1, + "uuidRole": "f3932aeae93533f19c0519c4c14702aa", + "IsDel": 0, + "CreateTime": "2023-08-12 00:00:00.000", + "CreateName": "admin", + "UpdateTime": "2023-08-12 00:00:00.000", + "UpdateName": "admin" + }, + { + "uuid": "2", + "UserName": "shortcut", + "Password": "4QrcOUm6Wau+VuBX8g+IPg==", + "RealName": "实验员", + "IsEnable": 1, + "uuidRole": "8c822592b360345fb59690e49ac6b181", + "IsDel": 0, + "CreateTime": null, + "CreateName": "admin", + "UpdateTime": "2023-10-23 00:00:00.000", + "UpdateName": null + } +] \ No newline at end of file diff --git a/unilabos/devices/liquid_handling/prcxi/prcxi.py b/unilabos/devices/liquid_handling/prcxi/prcxi.py index cd20f4c..68cc280 100644 --- a/unilabos/devices/liquid_handling/prcxi/prcxi.py +++ b/unilabos/devices/liquid_handling/prcxi/prcxi.py @@ -6,7 +6,7 @@ import os import socket import time import uuid -from typing import Any, List, Dict, Optional, Tuple, TypedDict, Union, Sequence, Iterator, Literal +from typing import Any, List, Dict, Optional, OrderedDict, Tuple, TypedDict, Union, Sequence, Iterator, Literal from pylabrobot.liquid_handling import ( LiquidHandlerBackend, @@ -28,7 +28,7 @@ from pylabrobot.liquid_handling.standard import ( ResourceMove, ResourceDrop, ) -from pylabrobot.resources import Tip, Deck, Plate, Well, TipRack, Resource, Container, Coordinate, TipSpot, Trash +from pylabrobot.resources import Tip, Deck, Plate, Well, TipRack, Resource, Container, Coordinate, TipSpot, Trash, TubeRack, PlateAdapter from unilabos.devices.liquid_handling.liquid_handler_abstract import LiquidHandlerAbstract from unilabos.ros.nodes.base_device_node import BaseROS2DeviceNode @@ -70,50 +70,129 @@ class PRCXI9300Deck(Deck): super().__init__(name, size_x, size_y, size_z) self.slots = [None] * 6 # PRCXI 9300 有 6 个槽位 - -class PRCXI9300Container(Plate, TipRack): - """PRCXI 9300 的专用 Container 类，继承自 Plate和TipRack。 - - 该类定义了 PRCXI 9300 的工作台布局和槽位信息。 +class PRCXI9300Plate(Plate): + """ + 专用孔板类： + 1. 继承自 PLR 原生 Plate，保留所有物理特性。 + 2. 增加 material_info 参数，用于在初始化时直接绑定 Unilab UUID。 """ - - def __init__( - self, - name: str, - size_x: float, - size_y: float, - size_z: float, - category: str, - ordering: collections.OrderedDict, - model: Optional[str] = None, - **kwargs, - ): - super().__init__(name, size_x, size_y, size_z, category=category, ordering=ordering, model=model) + def __init__(self, name: str, size_x: float, size_y: float, size_z: float, + category: str = "plate", + ordered_items: collections.OrderedDict = None, + ordering: Optional[collections.OrderedDict] = None, + model: Optional[str] = None, + material_info: Optional[Dict[str, Any]] = None, + **kwargs): + items = ordered_items if ordered_items is not None else ordering + super().__init__(name, size_x, size_y, size_z, + ordered_items=items, + category=category, + model=model, **kwargs) + self._unilabos_state = {} + if material_info: + self._unilabos_state["Material"] = material_info + def load_state(self, state: Dict[str, Any]) -> None: - """从给定的状态加载工作台信息。""" + super().load_state(state) + self._unilabos_state = state + + + def serialize_state(self) -> Dict[str, Dict[str, Any]]: + try: + data = super().serialize_state() + except AttributeError: + data = {} + if hasattr(self, '_unilabos_state') and self._unilabos_state: + safe_state = {} + for k, v in self._unilabos_state.items(): + # 如果是 Material 字典，深入检查 + if k == "Material" and isinstance(v, dict): + safe_material = {} + for mk, mv in v.items(): + # 只保留基本数据类型 (字符串, 数字, 布尔值, 列表, 字典) + if isinstance(mv, (str, int, float, bool, list, dict, type(None))): + safe_material[mk] = mv + else: + # 打印日志提醒（可选） + # print(f"Warning: Removing non-serializable key {mk} from {self.name}") + pass + safe_state[k] = safe_material + # 其他顶层属性也进行类型检查 + elif isinstance(v, (str, int, float, bool, list, dict, type(None))): + safe_state[k] = v + + data.update(safe_state) + return data + +class PRCXI9300TipRack(TipRack): + """ 专用吸头盒类 """ + def __init__(self, name: str, size_x: float, size_y: float, size_z: float, + category: str = "tip_rack", + ordered_items: collections.OrderedDict = None, + ordering: Optional[collections.OrderedDict] = None, + model: Optional[str] = None, + material_info: Optional[Dict[str, Any]] = None, + **kwargs): + items = ordered_items if ordered_items is not None else ordering + super().__init__(name, size_x, size_y, size_z, + ordered_items=items, + category=category, + model=model, **kwargs) + self._unilabos_state = {} + if material_info: + self._unilabos_state["Material"] = material_info + + def load_state(self, state: Dict[str, Any]) -> None: super().load_state(state) self._unilabos_state = state def serialize_state(self) -> Dict[str, Dict[str, Any]]: - data = super().serialize_state() - data.update(self._unilabos_state) + try: + data = super().serialize_state() + except AttributeError: + data = {} + if hasattr(self, '_unilabos_state') and self._unilabos_state: + safe_state = {} + for k, v in self._unilabos_state.items(): + # 如果是 Material 字典，深入检查 + if k == "Material" and isinstance(v, dict): + safe_material = {} + for mk, mv in v.items(): + # 只保留基本数据类型 (字符串, 数字, 布尔值, 列表, 字典) + if isinstance(mv, (str, int, float, bool, list, dict, type(None))): + safe_material[mk] = mv + else: + # 打印日志提醒（可选） + # print(f"Warning: Removing non-serializable key {mk} from {self.name}") + pass + safe_state[k] = safe_material + # 其他顶层属性也进行类型检查 + elif isinstance(v, (str, int, float, bool, list, dict, type(None))): + safe_state[k] = v + + data.update(safe_state) return data - - + class PRCXI9300Trash(Trash): """PRCXI 9300 的专用 Trash 类，继承自 Trash。 该类定义了 PRCXI 9300 的工作台布局和槽位信息。 """ - def __init__(self, name: str, size_x: float, size_y: float, size_z: float, category: str, **kwargs): + def __init__(self, name: str, size_x: float, size_y: float, size_z: float, + category: str = "trash", + material_info: Optional[Dict[str, Any]] = None, + **kwargs): + if name != "trash": - name = "trash" - print("PRCXI9300Trash name must be 'trash', using 'trash' instead.") - super().__init__(name, size_x, size_y, size_z, category=category, **kwargs) + print(f"Warning: PRCXI9300Trash usually expects name='trash' for backend logic, but got '{name}'.") + super().__init__(name, size_x, size_y, size_z, **kwargs) self._unilabos_state = {} + # 初始化时注入 UUID + if material_info: + self._unilabos_state["Material"] = material_info def load_state(self, state: Dict[str, Any]) -> None: """从给定的状态加载工作台信息。""" @@ -121,10 +200,152 @@ class PRCXI9300Trash(Trash): self._unilabos_state = state def serialize_state(self) -> Dict[str, Dict[str, Any]]: - data = super().serialize_state() - data.update(self._unilabos_state) + try: + data = super().serialize_state() + except AttributeError: + data = {} + if hasattr(self, '_unilabos_state') and self._unilabos_state: + safe_state = {} + for k, v in self._unilabos_state.items(): + # 如果是 Material 字典，深入检查 + if k == "Material" and isinstance(v, dict): + safe_material = {} + for mk, mv in v.items(): + # 只保留基本数据类型 (字符串, 数字, 布尔值, 列表, 字典) + if isinstance(mv, (str, int, float, bool, list, dict, type(None))): + safe_material[mk] = mv + else: + # 打印日志提醒（可选） + # print(f"Warning: Removing non-serializable key {mk} from {self.name}") + pass + safe_state[k] = safe_material + # 其他顶层属性也进行类型检查 + elif isinstance(v, (str, int, float, bool, list, dict, type(None))): + safe_state[k] = v + + data.update(safe_state) return data +class PRCXI9300TubeRack(TubeRack): + """ + 专用管架类：用于 EP 管架、试管架等。 + 继承自 PLR 的 TubeRack，并支持注入 material_info (UUID)。 + """ + def __init__(self, name: str, size_x: float, size_y: float, size_z: float, + category: str = "tube_rack", + items: Optional[Dict[str, Any]] = None, + ordered_items: Optional[OrderedDict] = None, + model: Optional[str] = None, + material_info: Optional[Dict[str, Any]] = None, + **kwargs): + + # 兼容处理：PLR 的 TubeRack 构造函数可能接受 items 或 ordered_items + items_to_pass = items if items is not None else ordered_items + super().__init__(name, size_x, size_y, size_z, + ordered_items=ordered_items, + model=model, + **kwargs) + + self._unilabos_state = {} + if material_info: + self._unilabos_state["Material"] = material_info + + def serialize_state(self) -> Dict[str, Dict[str, Any]]: + try: + data = super().serialize_state() + except AttributeError: + data = {} + if hasattr(self, '_unilabos_state') and self._unilabos_state: + safe_state = {} + for k, v in self._unilabos_state.items(): + # 如果是 Material 字典，深入检查 + if k == "Material" and isinstance(v, dict): + safe_material = {} + for mk, mv in v.items(): + # 只保留基本数据类型 (字符串, 数字, 布尔值, 列表, 字典) + if isinstance(mv, (str, int, float, bool, list, dict, type(None))): + safe_material[mk] = mv + else: + # 打印日志提醒（可选） + # print(f"Warning: Removing non-serializable key {mk} from {self.name}") + pass + safe_state[k] = safe_material + # 其他顶层属性也进行类型检查 + elif isinstance(v, (str, int, float, bool, list, dict, type(None))): + safe_state[k] = v + + data.update(safe_state) + return data + +class PRCXI9300PlateAdapter(PlateAdapter): + """ + 专用板式适配器类：用于承载 Plate 的底座（如 PCR 适配器、磁吸架等）。 + 支持注入 material_info (UUID)。 + """ + def __init__(self, name: str, size_x: float, size_y: float, size_z: float, + category: str = "plate_adapter", + model: Optional[str] = None, + material_info: Optional[Dict[str, Any]] = None, + # 参数给予默认值 (标准96孔板尺寸) + adapter_hole_size_x: float = 127.76, + adapter_hole_size_y: float = 85.48, + adapter_hole_size_z: float = 10.0, # 假设凹槽深度或板子放置高度 + dx: Optional[float] = None, + dy: Optional[float] = None, + dz: float = 0.0, # 默认Z轴偏移 + **kwargs): + + # 自动居中计算：如果未指定 dx/dy，则根据适配器尺寸和孔尺寸计算居中位置 + if dx is None: + dx = (size_x - adapter_hole_size_x) / 2 + if dy is None: + dy = (size_y - adapter_hole_size_y) / 2 + + super().__init__( + name=name, + size_x=size_x, + size_y=size_y, + size_z=size_z, + dx=dx, + dy=dy, + dz=dz, + adapter_hole_size_x=adapter_hole_size_x, + adapter_hole_size_y=adapter_hole_size_y, + adapter_hole_size_z=adapter_hole_size_z, + model=model, + **kwargs + ) + + self._unilabos_state = {} + if material_info: + self._unilabos_state["Material"] = material_info + + def serialize_state(self) -> Dict[str, Dict[str, Any]]: + try: + data = super().serialize_state() + except AttributeError: + data = {} + if hasattr(self, '_unilabos_state') and self._unilabos_state: + safe_state = {} + for k, v in self._unilabos_state.items(): + # 如果是 Material 字典，深入检查 + if k == "Material" and isinstance(v, dict): + safe_material = {} + for mk, mv in v.items(): + # 只保留基本数据类型 (字符串, 数字, 布尔值, 列表, 字典) + if isinstance(mv, (str, int, float, bool, list, dict, type(None))): + safe_material[mk] = mv + else: + # 打印日志提醒（可选） + # print(f"Warning: Removing non-serializable key {mk} from {self.name}") + pass + safe_state[k] = safe_material + # 其他顶层属性也进行类型检查 + elif isinstance(v, (str, int, float, bool, list, dict, type(None))): + safe_state[k] = v + + data.update(safe_state) + return data class PRCXI9300Handler(LiquidHandlerAbstract): support_touch_tip = False @@ -154,10 +375,15 @@ class PRCXI9300Handler(LiquidHandlerAbstract): tablets_info = [] count = 0 for child in deck.children: - if "Material" in child._unilabos_state: + child_state = getattr(child, "_unilabos_state", {}) + if "Material" in child_state: count += 1 tablets_info.append( - WorkTablets(Number=count, Code=f"T{count}", Material=child._unilabos_state["Material"]) + WorkTablets( + Number=count, + Code=f"T{count}", + Material=child_state["Material"] + ) ) if is_9320: print("当前设备是9320") @@ -434,7 +660,6 @@ class PRCXI9300Handler(LiquidHandlerAbstract): async def move_to(self, well: Well, dis_to_top: float = 0, channel: int = 0): return await super().move_to(well, dis_to_top, channel) - class PRCXI9300Backend(LiquidHandlerBackend): """PRCXI 9300 的后端实现，继承自 LiquidHandlerBackend。 @@ -1533,31 +1758,31 @@ if __name__ == "__main__": from pylabrobot.resources.opentrons.tip_racks import tipone_96_tiprack_200ul, opentrons_96_tiprack_10ul from pylabrobot.resources.opentrons.plates import corning_96_wellplate_360ul_flat, nest_96_wellplate_2ml_deep - def get_well_container(name: str) -> PRCXI9300Container: + def get_well_container(name: str) -> PRCXI9300Plate: well_containers = corning_96_wellplate_360ul_flat(name).serialize() - plate = PRCXI9300Container( - name=name, size_x=50, size_y=50, size_z=10, category="plate", ordering=well_containers["ordering"] + plate = PRCXI9300Plate( + name=name, size_x=50, size_y=50, size_z=10, category="plate", ordered_items=well_containers["ordering"] ) plate_serialized = plate.serialize() plate_serialized["parent_name"] = deck.name well_containers.update({k: v for k, v in plate_serialized.items() if k not in ["children"]}) - new_plate: PRCXI9300Container = PRCXI9300Container.deserialize(well_containers) + new_plate: PRCXI9300Plate = PRCXI9300Plate.deserialize(well_containers) return new_plate - def get_tip_rack(name: str, child_prefix: str = "tip") -> PRCXI9300Container: + def get_tip_rack(name: str, child_prefix: str = "tip") -> PRCXI9300TipRack: tip_racks = opentrons_96_tiprack_10ul(name).serialize() - tip_rack = PRCXI9300Container( + tip_rack = PRCXI9300TipRack( name=name, size_x=50, size_y=50, size_z=10, category="tip_rack", - ordering=collections.OrderedDict({k: f"{child_prefix}_{k}" for k, v in tip_racks["ordering"].items()}), + ordered_items=collections.OrderedDict({k: f"{child_prefix}_{k}" for k, v in tip_racks["ordering"].items()}), ) tip_rack_serialized = tip_rack.serialize() tip_rack_serialized["parent_name"] = deck.name tip_racks.update({k: v for k, v in tip_rack_serialized.items() if k not in ["children"]}) - new_tip_rack: PRCXI9300Container = PRCXI9300Container.deserialize(tip_racks) + new_tip_rack: PRCXI9300TipRack = PRCXI9300TipRack.deserialize(tip_racks) return new_tip_rack plate1 = get_tip_rack("RackT1") @@ -1604,8 +1829,8 @@ if __name__ == "__main__": } } ) - plate7 = PRCXI9300Container( - name="plateT7", size_x=50, size_y=50, size_z=10, category="plate", ordering=collections.OrderedDict() + plate7 = PRCXI9300Plate( + name="plateT7", size_x=50, size_y=50, size_z=10, category="plate", ordered_items=collections.OrderedDict() ) plate7.load_state({"Material": {"uuid": "04211a2dc93547fe9bf6121eac533650"}}) plate8 = get_tip_rack("PlateT8") @@ -1679,13 +1904,13 @@ if __name__ == "__main__": deck.assign_child_resource(plate1, location=Coordinate(0, 0, 0)) deck.assign_child_resource(plate2, location=Coordinate(0, 0, 0)) deck.assign_child_resource( - PRCXI9300Container( + PRCXI9300Plate( name="container_for_nothin3", size_x=50, size_y=50, size_z=10, category="plate", - ordering=collections.OrderedDict(), + ordered_items=collections.OrderedDict(), ), location=Coordinate(0, 0, 0), ) @@ -1693,48 +1918,48 @@ if __name__ == "__main__": deck.assign_child_resource(plate5, location=Coordinate(0, 0, 0)) deck.assign_child_resource(plate6, location=Coordinate(0, 0, 0)) deck.assign_child_resource( - PRCXI9300Container( + PRCXI9300Plate( name="container_for_nothing7", size_x=50, size_y=50, size_z=10, category="plate", - ordering=collections.OrderedDict(), + ordered_items=collections.OrderedDict(), ), location=Coordinate(0, 0, 0), ) deck.assign_child_resource( - PRCXI9300Container( + PRCXI9300Plate( name="container_for_nothing8", size_x=50, size_y=50, size_z=10, category="plate", - ordering=collections.OrderedDict(), + ordered_items=collections.OrderedDict(), ), location=Coordinate(0, 0, 0), ) deck.assign_child_resource(plate9, location=Coordinate(0, 0, 0)) deck.assign_child_resource(plate10, location=Coordinate(0, 0, 0)) deck.assign_child_resource( - PRCXI9300Container( + PRCXI9300Plate( name="container_for_nothing11", size_x=50, size_y=50, size_z=10, category="plate", - ordering=collections.OrderedDict(), + ordered_items=collections.OrderedDict(), ), location=Coordinate(0, 0, 0), ) deck.assign_child_resource( - PRCXI9300Container( + PRCXI9300Plate( name="container_for_nothing12", size_x=50, size_y=50, size_z=10, category="plate", - ordering=collections.OrderedDict(), + ordered_items=collections.OrderedDict(), ), location=Coordinate(0, 0, 0), ) diff --git a/unilabos/devices/liquid_handling/prcxi/prcxi_labware.py b/unilabos/devices/liquid_handling/prcxi/prcxi_labware.py new file mode 100644 index 0000000..b87e1e2 --- /dev/null +++ b/unilabos/devices/liquid_handling/prcxi/prcxi_labware.py @@ -0,0 +1,841 @@ +from typing import Optional +from pylabrobot.resources import Tube, Coordinate +from pylabrobot.resources.well import Well, WellBottomType, CrossSectionType +from pylabrobot.resources.tip import Tip, TipCreator +from pylabrobot.resources.tip_rack import TipRack, TipSpot +from pylabrobot.resources.utils import create_ordered_items_2d +from pylabrobot.resources.height_volume_functions import ( + compute_height_from_volume_rectangle, + compute_volume_from_height_rectangle, +) + +from .prcxi import PRCXI9300Plate, PRCXI9300TipRack, PRCXI9300Trash, PRCXI9300TubeRack, PRCXI9300PlateAdapter + +def _make_tip_helper(volume: float, length: float, depth: float) -> Tip: + """ + PLR 的 Tip 类参数名为: maximal_volume, total_tip_length, fitting_depth + """ + return Tip( + has_filter=False, # 默认无滤芯 + maximal_volume=volume, + total_tip_length=length, + fitting_depth=depth + ) + +# ========================================================================= +# 标准品 参照 PLR 标准库的参数，但是用 PRCXI9300Plate 实例化，并注入 UUID +# ========================================================================= +def PRCXI_BioER_96_wellplate(name: str) -> PRCXI9300Plate: + """ + 对应 JSON Code: ZX-019-2.2 (2.2ml 深孔板) + 原型: pylabrobot.resources.bioer.BioER_96_wellplate_Vb_2200uL + """ + return PRCXI9300Plate( + name=name, + size_x=127.1, + size_y=85.0, + size_z=44.2, + lid=None, + model="PRCXI_BioER_96_wellplate", + category="plate", + material_info={ + "uuid": "ca877b8b114a4310b429d1de4aae96ee", + "Code": "ZX-019-2.2", + "Name": "2.2ml 深孔板", + "materialEnum": 0, + "SupplyType": 1 + }, + + ordered_items=create_ordered_items_2d( + Well, + size_x=8.25, + size_y=8.25, + size_z=39.3, # 修改过 + dx=9.5, + dy=7.5, + dz=6, + material_z_thickness=0.8, + item_dx=9.0, + item_dy=9.0, + num_items_x=12, + num_items_y=8, + cross_section_type=CrossSectionType.RECTANGLE, + bottom_type=WellBottomType.V, # 是否需要修改？ + max_volume=2200, + ), + ) +def PRCXI_nest_1_troughplate(name: str) -> PRCXI9300Plate: + """ + 对应 JSON Code: ZX-58-10000 (储液槽) + 原型: pylabrobot.resources.nest.nest_1_troughplate_195000uL_Vb + """ + well_size_x = 127.76 - (14.38 - 9 / 2) * 2 + well_size_y = 85.48 - (11.24 - 9 / 2) * 2 + well_kwargs = { + "size_x": well_size_x, + "size_y": well_size_y, + "size_z": 26.85, + "bottom_type": WellBottomType.V, + "compute_height_from_volume": lambda liquid_volume: compute_height_from_volume_rectangle( + liquid_volume=liquid_volume, well_length=well_size_x, well_width=well_size_y + ), + "compute_volume_from_height": lambda liquid_height: compute_volume_from_height_rectangle( + liquid_height=liquid_height, well_length=well_size_x, well_width=well_size_y + ), + "material_z_thickness": 31.4 - 26.85 - 3.55, + } + + return PRCXI9300Plate( + name=name, + size_x=127.76, + size_y=85.48, + size_z=31.4, + lid=None, + model="PRCXI_Nest_1_troughplate", + category="plate", + material_info={ + "uuid": "04211a2dc93547fe9bf6121eac533650", + "Code": "ZX-58-10000", + "Name": "储液槽", + "materialEnum": 0, + "SupplyType": 1 + }, + + ordered_items=create_ordered_items_2d( + Well, + num_items_x=1, + num_items_y=1, + dx=14.38 - 9 / 2, + dy=11.24 - 9 / 2, + dz=3.55, + item_dx=9.0, + item_dy=9.0, + **well_kwargs, # 传入上面计算好的孔参数 + ), + ) +def PRCXI_BioRad_384_wellplate(name: str) -> PRCXI9300Plate: + """ + 对应 JSON Code: q3 (384板) + 原型: pylabrobot.resources.biorad.BioRad_384_wellplate_50uL_Vb + """ + return PRCXI9300Plate( + name=name, + # 直接抄录 PLR 标准品的物理尺寸 + size_x=127.76, + size_y=85.48, + size_z=10.40, + model="BioRad_384_wellplate_50uL_Vb", + category="plate", + # 2. 注入 Unilab 必须的 UUID 信息 + material_info={ + "uuid": "853dcfb6226f476e8b23c250217dc7da", + "Code": "q3", + "Name": "384板", + "SupplyType": 1, + }, + # 3. 定义孔的排列 (抄录标准参数) + ordered_items=create_ordered_items_2d( + Well, + num_items_x=24, + num_items_y=16, + dx=10.58, # A1 左边缘距离板子左边缘 需要进一步测量 + dy=7.44, # P1 下边缘距离板子下边缘 需要进一步测量 + dz=1.05, + item_dx=4.5, + item_dy=4.5, + size_x=3.10, + size_y=3.10, + size_z=9.35, + max_volume=50, + material_z_thickness=1, + bottom_type=WellBottomType.V, + cross_section_type=CrossSectionType.CIRCLE, + ) + ) +def PRCXI_AGenBio_4_troughplate(name: str) -> PRCXI9300Plate: + """ + 对应 JSON Code: sdfrth654 (4道储液槽) + 原型: pylabrobot.resources.agenbio.AGenBio_4_troughplate_75000uL_Vb + """ + INNER_WELL_WIDTH = 26.1 + INNER_WELL_LENGTH = 71.2 + well_kwargs = { + "size_x": 26, + "size_y": 71.2, + "size_z": 42.55, + "bottom_type": WellBottomType.FLAT, + "cross_section_type": CrossSectionType.RECTANGLE, + "compute_height_from_volume": lambda liquid_volume: compute_height_from_volume_rectangle( + liquid_volume, + INNER_WELL_LENGTH, + INNER_WELL_WIDTH, + ), + "compute_volume_from_height": lambda liquid_height: compute_volume_from_height_rectangle( + liquid_height, + INNER_WELL_LENGTH, + INNER_WELL_WIDTH, + ), + "material_z_thickness": 1, + } + + return PRCXI9300Plate( + name=name, + size_x=127.76, + size_y=85.48, + size_z=43.80, + model="PRCXI_AGenBio_4_troughplate", + category="plate", + material_info={ + "uuid": "01953864f6f140ccaa8ddffd4f3e46f5", + "Code": "sdfrth654", + "Name": "4道储液槽", + "materialEnum": 0, + "SupplyType": 1 + }, + + ordered_items=create_ordered_items_2d( + Well, + num_items_x=4, + num_items_y=1, + dx=9.8, + dy=7.2, + dz=0.9, + item_dx=INNER_WELL_WIDTH + 1, # 1 mm wall thickness + item_dy=INNER_WELL_LENGTH, + **well_kwargs, + ), + ) +def PRCXI_nest_12_troughplate(name: str) -> PRCXI9300Plate: + """ + 对应 JSON Code: 12道储液槽 (12道储液槽) + 原型: pylabrobot.resources.nest.nest_12_troughplate_15000uL_Vb + """ + well_size_x = 8.2 + well_size_y = 71.2 + well_kwargs = { + "size_x": well_size_x, + "size_y": well_size_y, + "size_z": 26.85, + "bottom_type": WellBottomType.V, + "compute_height_from_volume": lambda liquid_volume: compute_height_from_volume_rectangle( + liquid_volume=liquid_volume, well_length=well_size_x, well_width=well_size_y + ), + "compute_volume_from_height": lambda liquid_height: compute_volume_from_height_rectangle( + liquid_height=liquid_height, well_length=well_size_x, well_width=well_size_y + ), + "material_z_thickness": 31.4 - 26.85 - 3.55, + } + + return PRCXI9300Plate( + name=name, + size_x=127.76, + size_y=85.48, + size_z=31.4, + lid=None, + model="PRCXI_nest_12_troughplate", + category="plate", + material_info={ + "uuid": "0f1639987b154e1fac78f4fb29a1f7c1", + "Code": "12道储液槽", + "Name": "12道储液槽", + "materialEnum": 0, + "SupplyType": 1 + }, + ordered_items=create_ordered_items_2d( + Well, + num_items_x=12, + num_items_y=1, + dx=14.38 - 8.2 / 2, + dy=(85.48 - 71.2) / 2, + dz=3.55, + item_dx=9.0, + item_dy=9.0, + **well_kwargs, + ), + ) +def PRCXI_CellTreat_96_wellplate(name: str) -> PRCXI9300Plate: + """ + 对应 JSON Code: ZX-78-096 (细菌培养皿) + 原型: pylabrobot.resources.celltreat.CellTreat_96_wellplate_350ul_Fb + """ + well_kwargs = { + "size_x": 6.96, + "size_y": 6.96, + "size_z": 10.04, + "bottom_type": WellBottomType.FLAT, + "material_z_thickness": 1.75, + "cross_section_type": CrossSectionType.CIRCLE, + "max_volume": 300, + } + + return PRCXI9300Plate( + name=name, + size_x=127.61, + size_y=85.24, + size_z=14.30, + lid=None, + model="PRCXI_CellTreat_96_wellplate", + category="plate", + material_info={ + "uuid": "b05b3b2aafd94ec38ea0cd3215ecea8f", + "Code": "ZX-78-096", + "Name": "细菌培养皿", + "materialEnum": 4, + "SupplyType": 1 + }, + ordered_items=create_ordered_items_2d( + Well, + num_items_x=12, + num_items_y=8, + dx=10.83, + dy=7.67, + dz=4.05, + item_dx=9, + item_dy=9, + **well_kwargs, + ), + ) +# ========================================================================= +# 自定义/需测量品 (Custom Measurement) +# ========================================================================= +def PRCXI_10ul_eTips(name: str) -> PRCXI9300TipRack: + """ + 对应 JSON Code: ZX-001-10+ + """ + return PRCXI9300TipRack( + name=name, + size_x=122.11, + size_y=85.48, #修改 + size_z=58.23, + model="PRCXI_10ul_eTips", + material_info={ + "uuid": "068b3815e36b4a72a59bae017011b29f", + "Code": "ZX-001-10+", + "Name": "10μL加长 Tip头", + "SupplyType": 1 + }, + ordered_items=create_ordered_items_2d( + TipSpot, + num_items_x=12, + num_items_y=8, + dx=7.97, #需要修改 + dy=5.0, #需修改 + dz=2.0, #需修改 + item_dx=9.0, + item_dy=9.0, + size_x=7.0, + size_y=7.0, + size_z=0, + make_tip=lambda: _make_tip_helper(volume=10, length=52.0, depth=45.1) + ) + ) +def PRCXI_300ul_Tips(name: str) -> PRCXI9300TipRack: + """ + 对应 JSON Code: ZX-001-300 + 吸头盒通常比较特殊，需要定义 Tip 对象 + """ + return PRCXI9300TipRack( + name=name, + size_x=122.11, + size_y=85.48, #修改 + size_z=58.23, + model="PRCXI_300ul_Tips", + material_info={ + "uuid": "076250742950465b9d6ea29a225dfb00", + "Code": "ZX-001-300", + "Name": "300μL Tip头", + "SupplyType": 1 + }, + ordered_items=create_ordered_items_2d( + TipSpot, + num_items_x=12, + num_items_y=8, + dx=7.97, #需要修改 + dy=5.0, #需修改 + dz=2.0, #需修改 + item_dx=9.0, + item_dy=9.0, + size_x=7.0, + size_y=7.0, + size_z=0, + make_tip=lambda: _make_tip_helper(volume=300, length=60.0, depth=51.0) + ) + ) +def PRCXI_PCR_Plate_200uL_nonskirted(name: str) -> PRCXI9300Plate: + """ + 对应 JSON Code: ZX-023-0.2 (0.2ml PCR 板) + """ + return PRCXI9300Plate( + name=name, + size_x=119.5, + size_y=80.0, + size_z=26.0, + model="PRCXI_PCR_Plate_200uL_nonskirted", + plate_type="non-skirted", + category="plate", + material_info={ + "uuid": "73bb9b10bc394978b70e027bf45ce2d3", + "Code": "ZX-023-0.2", + "Name": "0.2ml PCR 板", + "materialEnum": 0, + "SupplyType": 1 + }, + ordered_items=create_ordered_items_2d( + Well, + num_items_x=12, + num_items_y=8, + dx=7, + dy=5, + dz=0.0, + item_dx=9, + item_dy=9, + size_x=6, + size_y=6, + size_z=15.17, + bottom_type=WellBottomType.V, + cross_section_type=CrossSectionType.CIRCLE, + ), +) +def PRCXI_PCR_Plate_200uL_semiskirted(name: str) -> PRCXI9300Plate: + """ + 对应 JSON Code: ZX-023-0.2 (0.2ml PCR 板) + """ + return PRCXI9300Plate( + name=name, + size_x=126, + size_y=86, + size_z=21.2, + model="PRCXI_PCR_Plate_200uL_semiskirted", + plate_type="semi-skirted", + category="plate", + material_info={ + "uuid": "73bb9b10bc394978b70e027bf45ce2d3", + "Code": "ZX-023-0.2", + "Name": "0.2ml PCR 板", + "materialEnum": 0, + "SupplyType": 1 + }, + ordered_items=create_ordered_items_2d( + Well, + num_items_x=12, + num_items_y=8, + dx=11, + dy=8, + dz=0.0, + item_dx=9, + item_dy=9, + size_x=6, + size_y=6, + size_z=15.17, + bottom_type=WellBottomType.V, + cross_section_type=CrossSectionType.CIRCLE, + ), +) +def PRCXI_PCR_Plate_200uL_skirted(name: str) -> PRCXI9300Plate: + """ + 对应 JSON Code: ZX-023-0.2 (0.2ml PCR 板) + """ + return PRCXI9300Plate( + name=name, + size_x=127.76, + size_y=86, + size_z=16.1, + model="PRCXI_PCR_Plate_200uL_skirted", + plate_type="skirted", + category="plate", + material_info={ + "uuid": "73bb9b10bc394978b70e027bf45ce2d3", + "Code": "ZX-023-0.2", + "Name": "0.2ml PCR 板", + "materialEnum": 0, + "SupplyType": 1 + }, + ordered_items=create_ordered_items_2d( + Well, + num_items_x=12, + num_items_y=8, + dx=11, + dy=8.49, + dz=0.8, + item_dx=9, + item_dy=9, + size_x=6, + size_y=6, + size_z=15.1, + bottom_type=WellBottomType.V, + cross_section_type=CrossSectionType.CIRCLE, + ), +) +def PRCXI_trash(name: str = "trash") -> PRCXI9300Trash: + """ + 对应 JSON Code: q1 (废弃槽) + """ + return PRCXI9300Trash( + name="trash", + size_x=126.59, + size_y=84.87, + size_z=89.5, # 修改 + category="trash", + model="PRCXI_trash", + material_info={ + "uuid": "730067cf07ae43849ddf4034299030e9", + "Code": "q1", + "Name": "废弃槽", + "materialEnum": 0, + "SupplyType": 1 + } + ) +def PRCXI_96_DeepWell(name: str) -> PRCXI9300Plate: + """ + 对应 JSON Code: q2 (96深孔板) + """ + return PRCXI9300Plate( + name=name, + size_x=127.3, + size_y=85.35, + size_z=45.0, #修改 + model="PRCXI_96_DeepWell", + material_info={ + "uuid": "57b1e4711e9e4a32b529f3132fc5931f", # 对应 q2 uuid + "Code": "q2", + "Name": "96深孔板", + "materialEnum": 0 + }, + ordered_items=create_ordered_items_2d( + Well, + num_items_x=12, + num_items_y=8, + dx=10.9, + dy=8.25, + dz=2.0, + item_dx=9.0, + item_dy=9.0, + size_x=8.2, + size_y=8.2, + size_z=42.0, + max_volume=2200 + ) + ) +def PRCXI_EP_Adapter(name: str) -> PRCXI9300TubeRack: + """ + 对应 JSON Code: 1 (ep适配器) + 这是一个 4x6 的 EP 管架，适配 1.5mL/2.0mL 离心管 + """ + ep_tube_prototype = Tube( + name="EP_Tube_1.5mL", + size_x=10.6, + size_y=10.6, + size_z=40.0, # 管子本身的高度，通常比架子孔略高或持平 + max_volume=1500, + model="EP_Tube_1.5mL" + ) + + # 计算 PRCXI9300TubeRack 中孔的起始位置 dx, dy + dy_calc = 85.8 - 10.5 - (3 * 18) - 10.6 + dx_calc = 3.54 + return PRCXI9300TubeRack( + name=name, + size_x=128.04, + size_y=85.8, + size_z=42.66, + model="PRCXI_EP_Adapter", + category="tube_rack", + material_info={ + "uuid": "e146697c395e4eabb3d6b74f0dd6aaf7", + "Code": "1", + "Name": "ep适配器", + "materialEnum": 0, + "SupplyType": 1 + }, + ordered_items=create_ordered_items_2d( + Tube, + num_items_x=6, + num_items_y=4, + dx=dx_calc, + dy=dy_calc, + dz=42.66 - 38.08, # 架高 - 孔深 + item_dx=21.0, + item_dy=18.0, + size_x=10.6, + size_y=10.6, + size_z=40.0, + max_volume=1500 + ) + ) +# ========================================================================= +# 无实物，需要测量 +# ========================================================================= +def PRCXI_Tip1250_Adapter(name: str) -> PRCXI9300PlateAdapter: + """ Code: ZX-58-1250 """ + return PRCXI9300PlateAdapter( + name=name, + size_x=128, + size_y=85, + size_z=20, + material_info={ + "uuid": "3b6f33ffbf734014bcc20e3c63e124d4", + "Code": "ZX-58-1250", + "Name": "Tip头适配器 1250uL", + "SupplyType": 2 + } + ) +def PRCXI_Tip300_Adapter(name: str) -> PRCXI9300PlateAdapter: + """ Code: ZX-58-300 """ + return PRCXI9300PlateAdapter( + name=name, + size_x=127, + size_y=85, + size_z=81, + material_info={ + "uuid": "7c822592b360451fb59690e49ac6b181", + "Code": "ZX-58-300", + "Name": "ZHONGXI 适配器 300uL", + "SupplyType": 2 + } + ) +def PRCXI_Tip10_Adapter(name: str) -> PRCXI9300PlateAdapter: + """ Code: ZX-58-10 """ + return PRCXI9300PlateAdapter( + name=name, + size_x=128, + size_y=85, + size_z=72.3, + material_info={ + "uuid": "8cc3dce884ac41c09f4570d0bcbfb01c", + "Code": "ZX-58-10", + "Name": "吸头10ul 适配器", + "SupplyType": 2 + } + ) +def PRCXI_1250uL_Tips(name: str) -> PRCXI9300TipRack: + """ Code: ZX-001-1250 """ + return PRCXI9300TipRack( + name=name, + size_x=118.09, + size_y=80.7, + size_z=107.67, + model="PRCXI_1250uL_Tips", + material_info={ + "uuid": "7960f49ddfe9448abadda89bd1556936", + "Code": "ZX-001-1250", + "Name": "1250μL Tip头", + "SupplyType": 1 + }, + ordered_items=create_ordered_items_2d( + TipSpot, + num_items_x=12, + num_items_y=8, + dx=9.545 - 7.95/2, + dy=8.85 - 7.95/2, + dz=2.0, + item_dx=9, + item_dy=9, + size_x=7.0, + size_y=7.0, + size_z=0, + make_tip=lambda: _make_tip_helper(volume=1250, length=107.67, depth=8) + ) + ) +def PRCXI_10uL_Tips(name: str) -> PRCXI9300TipRack: + """ Code: ZX-001-10 """ + return PRCXI9300TipRack( + name=name, + size_x=120.98, + size_y=82.12, + size_z=67, + model="PRCXI_10uL_Tips", + material_info={ + "uuid": "45f2ed3ad925484d96463d675a0ebf66", + "Code": "ZX-001-10", + "Name": "10μL Tip头", + "SupplyType": 1 + }, + ordered_items=create_ordered_items_2d( + TipSpot, + num_items_x=12, + num_items_y=8, + dx=10.99 - 5/2, + dy=9.56 - 5/2, + dz=2.0, + item_dx=9, + item_dy=9, + size_x=7.0, + size_y=7.0, + size_z=0, + make_tip=lambda: _make_tip_helper(volume=1250, length=52.0, depth=5) + ) + ) +def PRCXI_1000uL_Tips(name: str) -> PRCXI9300TipRack: + """ Code: ZX-001-1000 """ + return PRCXI9300TipRack( + name=name, + size_x=128.09, + size_y=85.8, + size_z=98, + model="PRCXI_1000uL_Tips", + material_info={ + "uuid": "80652665f6a54402b2408d50b40398df", + "Code": "ZX-001-1000", + "Name": "1000μL Tip头", + "SupplyType": 1 + }, + ordered_items=create_ordered_items_2d( + TipSpot, + num_items_x=12, + num_items_y=8, + dx=14.5 - 7.95/2, + dy=7.425, + dz=2.0, + item_dx=9, + item_dy=9, + size_x=7.0, + size_y=7.0, + size_z=0, + make_tip=lambda: _make_tip_helper(volume=1000, length=55.0, depth=8) + ) + ) +def PRCXI_200uL_Tips(name: str) -> PRCXI9300TipRack: + """ Code: ZX-001-200 """ + return PRCXI9300TipRack( + name=name, + size_x=120.98, + size_y=82.12, + size_z=66.9, + model="PRCXI_200uL_Tips", + material_info={ + "uuid": "7a73bb9e5c264515a8fcbe88aed0e6f7", + "Code": "ZX-001-200", + "Name": "200μL Tip头", + "SupplyType": 1}, + ordered_items=create_ordered_items_2d( + TipSpot, + num_items_x=12, + num_items_y=8, + dx=10.99 - 5.5/2, + dy=9.56 - 5.5/2, + dz=2.0, + item_dx=9, + item_dy=9, + size_x=7.0, + size_z=0, + size_y=7.0, + make_tip=lambda: _make_tip_helper(volume=200, length=52.0, depth=5) + ) + ) +def PRCXI_PCR_Adapter(name: str) -> PRCXI9300PlateAdapter: + """ + 对应 JSON Code: ZX-58-0001 (全裙边 PCR适配器) + """ + return PRCXI9300PlateAdapter( + name=name, + size_x=127.76, + size_y=85.48, + size_z=21.69, + model="PRCXI_PCR_Adapter", + material_info={ + "uuid": "4a043a07c65a4f9bb97745e1f129b165", + "Code": "ZX-58-0001", + "Name": "全裙边 PCR适配器", + "materialEnum": 3, + "SupplyType": 2 + } + ) +def PRCXI_Reservoir_Adapter(name: str) -> PRCXI9300PlateAdapter: + """ Code: ZX-ADP-001 """ + return PRCXI9300PlateAdapter( + name=name, + size_x=133, + size_y=91.8, + size_z=70, + material_info={ + "uuid": "6bdfdd7069df453896b0806df50f2f4d", + "Code": "ZX-ADP-001", + "Name": "储液槽 适配器", + "SupplyType": 2 + } + ) +def PRCXI_Deep300_Adapter(name: str) -> PRCXI9300PlateAdapter: + """ Code: ZX-002-300 """ + return PRCXI9300PlateAdapter( + name=name, + size_x=136.4, + size_y=93.8, + size_z=96, + material_info={ + "uuid": "9a439bed8f3344549643d6b3bc5a5eb4", + "Code": "ZX-002-300", + "Name": "300ul深孔板适配器", + "SupplyType": 2 + } + ) +def PRCXI_Deep10_Adapter(name: str) -> PRCXI9300PlateAdapter: + """ Code: ZX-002-10 """ + return PRCXI9300PlateAdapter( + name=name, + size_x=136.5, + size_y=93.8, + size_z=121.5, + material_info={ + "uuid": "4dc8d6ecfd0449549683b8ef815a861b", + "Code": "ZX-002-10", + "Name": "10ul专用深孔板适配器", + "SupplyType": 2 + } + ) +def PRCXI_Adapter(name: str) -> PRCXI9300PlateAdapter: + """ Code: Fhh478 """ + return PRCXI9300PlateAdapter( + name=name, + size_x=120, + size_y=90, + size_z=86, + material_info={ + "uuid": "adfabfffa8f24af5abfbba67b8d0f973", + "Code": "Fhh478", + "Name": "适配器", + "SupplyType": 2 + } + ) +def PRCXI_48_DeepWell(name: str) -> PRCXI9300Plate: + """ Code: 22 (48孔深孔板) """ + print("Warning: Code '22' (48孔深孔板) dimensions are null in JSON.") + return PRCXI9300Plate( + name=name, + size_x=127, + size_y=85, + size_z=44, + model="PRCXI_48_DeepWell", + material_info={ + "uuid": "026c5d5cf3d94e56b4e16b7fb53a995b", + "Code": "22", + "Name": "48孔深孔板", + "SupplyType": 1 + }, + ordered_items=create_ordered_items_2d( + Well, + num_items_x=6, + num_items_y=8, + dx=10, + dy=10, + dz=1, + item_dx=18.5, + item_dy=9, + size_x=8, + size_y=8, + size_z=40 + ) + ) +def PRCXI_30mm_Adapter(name: str) -> PRCXI9300PlateAdapter: + """ Code: ZX-58-30 """ + return PRCXI9300PlateAdapter( + name=name, + size_x=132, + size_y=93.5, + size_z=30, + material_info={ + "uuid": "a0757a90d8e44e81a68f306a608694f2", + "Code": "ZX-58-30", + "Name": "30mm适配器", + "SupplyType": 2 + } + ) \ No newline at end of file diff --git a/unilabos/devices/liquid_handling/prcxi/prcxi_material.json b/unilabos/devices/liquid_handling/prcxi/prcxi_material.json deleted file mode 100644 index 8401e86..0000000 --- a/unilabos/devices/liquid_handling/prcxi/prcxi_material.json +++ /dev/null @@ -1,31 +0,0 @@ -{ - "Tip头适配器 1250uL": {"uuid": "3b6f33ffbf734014bcc20e3c63e124d4", "materialEnum": "0"}, - "ZHONGXI 适配器 300uL": {"uuid": "7c822592b360451fb59690e49ac6b181", "materialEnum": "0"}, - "吸头10ul 适配器": {"uuid": "8cc3dce884ac41c09f4570d0bcbfb01c", "materialEnum": "0"}, - "1250μL Tip头": {"uuid": "7960f49ddfe9448abadda89bd1556936", "materialEnum": "0"}, - "10μL Tip头": {"uuid": "45f2ed3ad925484d96463d675a0ebf66", "materialEnum": "0"}, - "10μL加长 Tip头": {"uuid": "068b3815e36b4a72a59bae017011b29f", "materialEnum": "1"}, - "1000μL Tip头": {"uuid": "80652665f6a54402b2408d50b40398df", "materialEnum": "1"}, - "300μL Tip头": {"uuid": "076250742950465b9d6ea29a225dfb00", "materialEnum": "1"}, - "200μL Tip头": {"uuid": "7a73bb9e5c264515a8fcbe88aed0e6f7", "materialEnum": "0"}, - "0.2ml PCR板": {"uuid": "73bb9b10bc394978b70e027bf45ce2d3", "materialEnum": "0"}, - "2.2ml 深孔板": {"uuid": "ca877b8b114a4310b429d1de4aae96ee", "materialEnum": "0"}, - "储液槽": {"uuid": "04211a2dc93547fe9bf6121eac533650", "materialEnum": "0"}, - "全裙边 PCR适配器": {"uuid": "4a043a07c65a4f9bb97745e1f129b165", "materialEnum": "3"}, - "储液槽 适配器": {"uuid": "6bdfdd7069df453896b0806df50f2f4d", "materialEnum": "0"}, - "300ul深孔板适配器": {"uuid": "9a439bed8f3344549643d6b3bc5a5eb4", "materialEnum": "0"}, - "10ul专用深孔板适配器": {"uuid": "4dc8d6ecfd0449549683b8ef815a861b", "materialEnum": "0"}, - "爱津": {"uuid": "b01627718d3341aba649baa81c2c083c", "materialEnum": "0"}, - "适配器": {"uuid": "adfabfffa8f24af5abfbba67b8d0f973", "materialEnum": "0"}, - "废弃槽": {"uuid": "730067cf07ae43849ddf4034299030e9", "materialEnum": "0"}, - "96深孔板": {"uuid": "57b1e4711e9e4a32b529f3132fc5931f", "materialEnum": "0"}, - "384板": {"uuid": "853dcfb6226f476e8b23c250217dc7da", "materialEnum": "0"}, - "4道储液槽": {"uuid": "01953864f6f140ccaa8ddffd4f3e46f5", "materialEnum": "0"}, - "48孔深孔板": {"uuid": "026c5d5cf3d94e56b4e16b7fb53a995b", "materialEnum": "2"}, - "12道储液槽": {"uuid": "0f1639987b154e1fac78f4fb29a1f7c1", "materialEnum": "0"}, - "HPLC料盘": {"uuid": "548bbc3df0d4447586f2c19d2c0c0c55", "materialEnum": "0"}, - "ep适配器": {"uuid": "e146697c395e4eabb3d6b74f0dd6aaf7", "materialEnum": "0"}, - "30mm适配器": {"uuid": "a0757a90d8e44e81a68f306a608694f2", "materialEnum": "0"}, - "细菌培养皿": {"uuid": "b05b3b2aafd94ec38ea0cd3215ecea8f", "materialEnum": "4"}, - "96 细胞培养皿":{ "uuid": "57b1e4711e9e4a32b529f3132fc5931f", "materialEnum": "0"} -} \ No newline at end of file diff --git a/unilabos/devices/liquid_handling/prcxi/prcxi_materials.py b/unilabos/devices/liquid_handling/prcxi/prcxi_materials.py deleted file mode 100644 index 097ee0a..0000000 --- a/unilabos/devices/liquid_handling/prcxi/prcxi_materials.py +++ /dev/null @@ -1,21 +0,0 @@ -import collections -import json -from pathlib import Path - -from unilabos.devices.liquid_handling.prcxi.prcxi import PRCXI9300Container - - -prcxi_materials_path = str(Path(__file__).parent / "prcxi_material.json") -with open(prcxi_materials_path, mode="r", encoding="utf-8") as f: - prcxi_materials = json.loads(f.read()) - - -def tip_adaptor_1250ul(name="Tip头适配器 1250uL") -> PRCXI9300Container: # 必须传入一个name参数，是plr的规范要求 - # tip_rack = PRCXI9300Container(name, prcxi_materials["name"]["Height"]) - tip_rack = PRCXI9300Container(name, 1000,400,800, "tip_rack", collections.OrderedDict()) - tip_rack.load_state({ - "Materials": {"uuid": "7960f49ddfe9448abadda89bd1556936", "materialEnum": "0"} - }) - return tip_rack - - diff --git a/unilabos/devices/liquid_handling/prcxi/prcxi_res.py b/unilabos/devices/liquid_handling/prcxi/prcxi_res.py deleted file mode 100644 index b786d3a..0000000 --- a/unilabos/devices/liquid_handling/prcxi/prcxi_res.py +++ /dev/null @@ -1,44 +0,0 @@ -import collections - -from pylabrobot.resources import opentrons_96_tiprack_10ul -from pylabrobot.resources.opentrons.plates import corning_96_wellplate_360ul_flat, nest_96_wellplate_2ml_deep - -from unilabos.devices.liquid_handling.prcxi.prcxi import PRCXI9300Container, PRCXI9300Trash - - -def get_well_container(name: str) -> PRCXI9300Container: - well_containers = corning_96_wellplate_360ul_flat(name).serialize() - plate = PRCXI9300Container(name=name, size_x=50, size_y=50, size_z=10, category="plate", - ordering=collections.OrderedDict()) - plate_serialized = plate.serialize() - well_containers.update({k: v for k, v in plate_serialized.items() if k not in ["children"]}) - new_plate: PRCXI9300Container = PRCXI9300Container.deserialize(well_containers) - return new_plate - -def get_tip_rack(name: str) -> PRCXI9300Container: - tip_racks = opentrons_96_tiprack_10ul("name").serialize() - tip_rack = PRCXI9300Container(name=name, size_x=50, size_y=50, size_z=10, category="tip_rack", - ordering=collections.OrderedDict()) - tip_rack_serialized = tip_rack.serialize() - tip_racks.update({k: v for k, v in tip_rack_serialized.items() if k not in ["children"]}) - new_tip_rack: PRCXI9300Container = PRCXI9300Container.deserialize(tip_racks) - return new_tip_rack - -def prcxi_96_wellplate_360ul_flat(name: str): - return get_well_container(name) - -def prcxi_opentrons_96_tiprack_10ul(name: str): - return get_tip_rack(name) - -def prcxi_trash(name: str = None): - return PRCXI9300Trash(name="trash", size_x=50, size_y=50, size_z=10, category="trash") - -if __name__ == "__main__": - # Example usage - test_plate = prcxi_96_wellplate_360ul_flat("test_plate") - test_rack = prcxi_opentrons_96_tiprack_10ul("test_rack") - tash = prcxi_trash("trash") - print(test_plate) - print(test_rack) - print(tash) - # Output will be a dictionary representation of the PRCXI9300Container with well details \ No newline at end of file diff --git a/unilabos/registry/resources/prcxi/plate_adapters.yaml b/unilabos/registry/resources/prcxi/plate_adapters.yaml new file mode 100644 index 0000000..027b932 --- /dev/null +++ b/unilabos/registry/resources/prcxi/plate_adapters.yaml @@ -0,0 +1,108 @@ +PRCXI_30mm_Adapter: + category: + - prcxi + class: + module: unilabos.devices.liquid_handling.prcxi.prcxi_labware:PRCXI_30mm_Adapter + type: pylabrobot + description: '30mm适配器 (Code: ZX-58-30)' + handles: [] + icon: '' + init_param_schema: {} + registry_type: resource + version: 1.0.0 +PRCXI_Adapter: + category: + - prcxi + class: + module: unilabos.devices.liquid_handling.prcxi.prcxi_labware:PRCXI_Adapter + type: pylabrobot + description: '适配器 (Code: Fhh478)' + handles: [] + icon: '' + init_param_schema: {} + registry_type: resource + version: 1.0.0 +PRCXI_Deep10_Adapter: + category: + - prcxi + class: + module: unilabos.devices.liquid_handling.prcxi.prcxi_labware:PRCXI_Deep10_Adapter + type: pylabrobot + description: '10ul专用深孔板适配器 (Code: ZX-002-10)' + handles: [] + icon: '' + init_param_schema: {} + registry_type: resource + version: 1.0.0 +PRCXI_Deep300_Adapter: + category: + - prcxi + class: + module: unilabos.devices.liquid_handling.prcxi.prcxi_labware:PRCXI_Deep300_Adapter + type: pylabrobot + description: '300ul深孔板适配器 (Code: ZX-002-300)' + handles: [] + icon: '' + init_param_schema: {} + registry_type: resource + version: 1.0.0 +PRCXI_PCR_Adapter: + category: + - prcxi + class: + module: unilabos.devices.liquid_handling.prcxi.prcxi_labware:PRCXI_PCR_Adapter + type: pylabrobot + description: '全裙边 PCR适配器 (Code: ZX-58-0001)' + handles: [] + icon: '' + init_param_schema: {} + registry_type: resource + version: 1.0.0 +PRCXI_Reservoir_Adapter: + category: + - prcxi + class: + module: unilabos.devices.liquid_handling.prcxi.prcxi_labware:PRCXI_Reservoir_Adapter + type: pylabrobot + description: '储液槽 适配器 (Code: ZX-ADP-001)' + handles: [] + icon: '' + init_param_schema: {} + registry_type: resource + version: 1.0.0 +PRCXI_Tip10_Adapter: + category: + - prcxi + class: + module: unilabos.devices.liquid_handling.prcxi.prcxi_labware:PRCXI_Tip10_Adapter + type: pylabrobot + description: '吸头10ul 适配器 (Code: ZX-58-10)' + handles: [] + icon: '' + init_param_schema: {} + registry_type: resource + version: 1.0.0 +PRCXI_Tip1250_Adapter: + category: + - prcxi + class: + module: unilabos.devices.liquid_handling.prcxi.prcxi_labware:PRCXI_Tip1250_Adapter + type: pylabrobot + description: 'Tip头适配器 1250uL (Code: ZX-58-1250)' + handles: [] + icon: '' + init_param_schema: {} + registry_type: resource + version: 1.0.0 +PRCXI_Tip300_Adapter: + category: + - prcxi + class: + module: unilabos.devices.liquid_handling.prcxi.prcxi_labware:PRCXI_Tip300_Adapter + type: pylabrobot + description: 'ZHONGXI 适配器 300uL (Code: ZX-58-300)' + handles: [] + icon: '' + init_param_schema: {} + registry_type: resource + version: 1.0.0 diff --git a/unilabos/registry/resources/prcxi/plates.yaml b/unilabos/registry/resources/prcxi/plates.yaml index d07ee87..68bae48 100644 --- a/unilabos/registry/resources/prcxi/plates.yaml +++ b/unilabos/registry/resources/prcxi/plates.yaml @@ -1,10 +1,130 @@ -prcxi_96_wellplate_360ul_flat: - category: - - plates +PRCXI_48_DeepWell: + category: + - prcxi class: - module: unilabos.devices.liquid_handling.prcxi.prcxi_res:prcxi_96_wellplate_360ul_flat + module: unilabos.devices.liquid_handling.prcxi.prcxi_labware:PRCXI_48_DeepWell type: pylabrobot - description: prcxi_96_wellplate_360ul_flat + description: '48孔深孔板 (Code: 22)' + handles: [] + icon: '' + init_param_schema: {} + registry_type: resource + version: 1.0.0 +PRCXI_96_DeepWell: + category: + - prcxi + class: + module: unilabos.devices.liquid_handling.prcxi.prcxi_labware:PRCXI_96_DeepWell + type: pylabrobot + description: '96深孔板 (Code: q2)' + handles: [] + icon: '' + init_param_schema: {} + registry_type: resource + version: 1.0.0 +PRCXI_AGenBio_4_troughplate: + category: + - prcxi + class: + module: unilabos.devices.liquid_handling.prcxi.prcxi_labware:PRCXI_AGenBio_4_troughplate + type: pylabrobot + description: '4道储液槽 (Code: sdfrth654)' + handles: [] + icon: '' + init_param_schema: {} + registry_type: resource + version: 1.0.0 +PRCXI_BioER_96_wellplate: + category: + - prcxi + class: + module: unilabos.devices.liquid_handling.prcxi.prcxi_labware:PRCXI_BioER_96_wellplate + type: pylabrobot + description: '2.2ml 深孔板 (Code: ZX-019-2.2)' + handles: [] + icon: '' + init_param_schema: {} + registry_type: resource + version: 1.0.0 +PRCXI_BioRad_384_wellplate: + category: + - prcxi + class: + module: unilabos.devices.liquid_handling.prcxi.prcxi_labware:PRCXI_BioRad_384_wellplate + type: pylabrobot + description: '384板 (Code: q3)' + handles: [] + icon: '' + init_param_schema: {} + registry_type: resource + version: 1.0.0 +PRCXI_CellTreat_96_wellplate: + category: + - prcxi + class: + module: unilabos.devices.liquid_handling.prcxi.prcxi_labware:PRCXI_CellTreat_96_wellplate + type: pylabrobot + description: '细菌培养皿 (Code: ZX-78-096)' + handles: [] + icon: '' + init_param_schema: {} + registry_type: resource + version: 1.0.0 +PRCXI_PCR_Plate_200uL_nonskirted: + category: + - prcxi + class: + module: unilabos.devices.liquid_handling.prcxi.prcxi_labware:PRCXI_PCR_Plate_200uL_nonskirted + type: pylabrobot + description: '0.2ml PCR 板 (Code: ZX-023-0.2)' + handles: [] + icon: '' + init_param_schema: {} + registry_type: resource + version: 1.0.0 +PRCXI_PCR_Plate_200uL_semiskirted: + category: + - prcxi + class: + module: unilabos.devices.liquid_handling.prcxi.prcxi_labware:PRCXI_PCR_Plate_200uL_semiskirted + type: pylabrobot + description: '0.2ml PCR 板 (Code: ZX-023-0.2)' + handles: [] + icon: '' + init_param_schema: {} + registry_type: resource + version: 1.0.0 +PRCXI_PCR_Plate_200uL_skirted: + category: + - prcxi + class: + module: unilabos.devices.liquid_handling.prcxi.prcxi_labware:PRCXI_PCR_Plate_200uL_skirted + type: pylabrobot + description: '0.2ml PCR 板 (Code: ZX-023-0.2)' + handles: [] + icon: '' + init_param_schema: {} + registry_type: resource + version: 1.0.0 +PRCXI_nest_12_troughplate: + category: + - prcxi + class: + module: unilabos.devices.liquid_handling.prcxi.prcxi_labware:PRCXI_nest_12_troughplate + type: pylabrobot + description: '12道储液槽 (Code: 12道储液槽)' + handles: [] + icon: '' + init_param_schema: {} + registry_type: resource + version: 1.0.0 +PRCXI_nest_1_troughplate: + category: + - prcxi + class: + module: unilabos.devices.liquid_handling.prcxi.prcxi_labware:PRCXI_nest_1_troughplate + type: pylabrobot + description: '储液槽 (Code: ZX-58-10000)' handles: [] icon: '' init_param_schema: {} diff --git a/unilabos/registry/resources/prcxi/tip_racks.yaml b/unilabos/registry/resources/prcxi/tip_racks.yaml index f97a3d0..ef2c599 100644 --- a/unilabos/registry/resources/prcxi/tip_racks.yaml +++ b/unilabos/registry/resources/prcxi/tip_racks.yaml @@ -1,23 +1,70 @@ -prcxi_opentrons_96_tiprack_10ul: - category: - - tip_racks - class: - module: unilabos.devices.liquid_handling.prcxi.prcxi_res:prcxi_opentrons_96_tiprack_10ul - type: pylabrobot - description: prcxi_opentrons_96_tiprack_10ul - handles: [] - icon: '' - init_param_schema: {} - registry_type: resource - version: 1.0.0 -tip_adaptor_1250ul_2: - category: +PRCXI_1000uL_Tips: + category: - prcxi - - tip_racks class: - module: unilabos.devices.liquid_handling.prcxi.prcxi_materials:tip_adaptor_1250ul + module: unilabos.devices.liquid_handling.prcxi.prcxi_labware:PRCXI_1000uL_Tips type: pylabrobot - description: Tip头适配器 1250uL + description: '1000μL Tip头 (Code: ZX-001-1000)' + handles: [] + icon: '' + init_param_schema: {} + registry_type: resource + version: 1.0.0 +PRCXI_10uL_Tips: + category: + - prcxi + class: + module: unilabos.devices.liquid_handling.prcxi.prcxi_labware:PRCXI_10uL_Tips + type: pylabrobot + description: '10μL Tip头 (Code: ZX-001-10)' + handles: [] + icon: '' + init_param_schema: {} + registry_type: resource + version: 1.0.0 +PRCXI_10ul_eTips: + category: + - prcxi + class: + module: unilabos.devices.liquid_handling.prcxi.prcxi_labware:PRCXI_10ul_eTips + type: pylabrobot + description: '10μL加长 Tip头 (Code: ZX-001-10+)' + handles: [] + icon: '' + init_param_schema: {} + registry_type: resource + version: 1.0.0 +PRCXI_1250uL_Tips: + category: + - prcxi + class: + module: unilabos.devices.liquid_handling.prcxi.prcxi_labware:PRCXI_1250uL_Tips + type: pylabrobot + description: '1250μL Tip头 (Code: ZX-001-1250)' + handles: [] + icon: '' + init_param_schema: {} + registry_type: resource + version: 1.0.0 +PRCXI_200uL_Tips: + category: + - prcxi + class: + module: unilabos.devices.liquid_handling.prcxi.prcxi_labware:PRCXI_200uL_Tips + type: pylabrobot + description: '200μL Tip头 (Code: ZX-001-200)' + handles: [] + icon: '' + init_param_schema: {} + registry_type: resource + version: 1.0.0 +PRCXI_300ul_Tips: + category: + - prcxi + class: + module: unilabos.devices.liquid_handling.prcxi.prcxi_labware:PRCXI_300ul_Tips + type: pylabrobot + description: '300μL Tip头 (Code: ZX-001-300)' handles: [] icon: '' init_param_schema: {} diff --git a/unilabos/registry/resources/prcxi/trash.yaml b/unilabos/registry/resources/prcxi/trash.yaml index ca627c8..b71d1cf 100644 --- a/unilabos/registry/resources/prcxi/trash.yaml +++ b/unilabos/registry/resources/prcxi/trash.yaml @@ -1,10 +1,10 @@ -prcxi_trash: - category: - - trash +PRCXI_trash: + category: + - prcxi class: - module: unilabos.devices.liquid_handling.prcxi.prcxi_res:prcxi_trash + module: unilabos.devices.liquid_handling.prcxi.prcxi_labware:PRCXI_trash type: pylabrobot - description: prcxi_trash + description: '废弃槽 (Code: q1)' handles: [] icon: '' init_param_schema: {} diff --git a/unilabos/registry/resources/prcxi/tube_racks.yaml b/unilabos/registry/resources/prcxi/tube_racks.yaml new file mode 100644 index 0000000..4aa7e95 --- /dev/null +++ b/unilabos/registry/resources/prcxi/tube_racks.yaml @@ -0,0 +1,12 @@ +PRCXI_EP_Adapter: + category: + - prcxi + class: + module: unilabos.devices.liquid_handling.prcxi.prcxi_labware:PRCXI_EP_Adapter + type: pylabrobot + description: 'ep适配器 (Code: 1)' + handles: [] + icon: '' + init_param_schema: {} + registry_type: resource + version: 1.0.0 diff --git a/unilabos/resources/plr_additional_res_reg.py b/unilabos/resources/plr_additional_res_reg.py index a1e4831..1c019de 100644 --- a/unilabos/resources/plr_additional_res_reg.py +++ b/unilabos/resources/plr_additional_res_reg.py @@ -4,7 +4,11 @@ def register(): # noinspection PyUnresolvedReferences from unilabos.devices.liquid_handling.prcxi.prcxi import PRCXI9300Deck # noinspection PyUnresolvedReferences - from unilabos.devices.liquid_handling.prcxi.prcxi import PRCXI9300Container + from unilabos.devices.liquid_handling.prcxi.prcxi import PRCXI9300Plate + from unilabos.devices.liquid_handling.prcxi.prcxi import PRCXI9300PlateAdapter + from unilabos.devices.liquid_handling.prcxi.prcxi import PRCXI9300TipRack + from unilabos.devices.liquid_handling.prcxi.prcxi import PRCXI9300Trash + from unilabos.devices.liquid_handling.prcxi.prcxi import PRCXI9300TubeRack # noinspection PyUnresolvedReferences from unilabos.devices.workstation.workstation_base import WorkStationContainer diff --git a/unilabos/test/experiments/prcxi_9300.json b/unilabos/test/experiments/prcxi_9300.json index 4901c5d..f856db1 100644 --- a/unilabos/test/experiments/prcxi_9300.json +++ b/unilabos/test/experiments/prcxi_9300.json @@ -178,7 +178,7 @@ "z": 0 }, "config": { - "type": "PRCXI9300Container", + "type": "PRCXI9300TipRack", "size_x": 50, "size_y": 40, "size_z": 30, @@ -4248,7 +4248,7 @@ "z": 0 }, "config": { - "type": "PRCXI9300Container", + "type": "PRCXI9300Plate", "size_x": 50, "size_y": 40, "size_z": 30, @@ -9415,7 +9415,7 @@ "z": 0 }, "config": { - "type": "PRCXI9300Container", + "type": "PRCXI9300Plate", "size_x": 50, "size_y": 40, "size_z": 30, @@ -13389,7 +13389,7 @@ "z": 0 }, "config": { - "type": "PRCXI9300Container", + "type": "PRCXI9300Plate", "size_x": 50, "size_y": 40, "size_z": 30, @@ -17363,7 +17363,7 @@ "z": 0 }, "config": { - "type": "PRCXI9300Container", + "type": "PRCXI9300Plate", "size_x": 50, "size_y": 40, "size_z": 30,