v0.9.7 (#50)

注册表单独上传、新增大量模拟节点与Protocol、新增container管理、修复pip install出现的文件缺失问题


* add biomek.py demo implementation

* 更新LiquidHandlerBiomek类，添加资源创建功能，优化协议创建方法，修复部分代码格式问题，更新YAML配置以支持新功能。

* Test

* fix biomek success type

* Convert LH action to biomek.

* Update biomek.py

* 注册表上报handle和schema (param input)

* 修复biomek缺少的字段

* delete 's'

* Remove warnings

* Update biomek.py

* Biomek test

* Update biomek.py

* 新增transfer_biomek的msg

* New transfer_biomek

* Updated transfer_biomek

* 更新transfer_biomek的msg

* 更新transfer_biomek的msg

* 支持Biomek创建

* new action

* fix key name typo

* New parameter for biomek to run.

* Refine

* Update

* new actions

* new actions

* 1

* registry

* fix biomek startup
add action handles

* fix handles not as default entry

* biomek_test.py

biomek_test.py是最新的版本，运行它会生成complete_biomek_protocol.json

* Update biomek.py

* biomek_test.py

* fix liquid_handler.biomek handles

* host node新增resource add时间统计
create_resource新增handle
bump version to 0.9.2

* 修正物料上传时间
改用biomek_test
增加ResultInfoEncoder
支持返回结果上传

* 正确发送return_info结果

* 同步执行状态信息

* 取消raiseValueError提示

* Update biomek_test.py

* 0608 DONE

* 同步了Biomek.py 现在应可用

* biomek switch back to non-test

* temp disable initialize resource

* 37-biomek-i5i7 (#40)

* add biomek.py demo implementation

* 更新LiquidHandlerBiomek类，添加资源创建功能，优化协议创建方法，修复部分代码格式问题，更新YAML配置以支持新功能。

* Test

* fix biomek success type

* Convert LH action to biomek.

* Update biomek.py

* 注册表上报handle和schema (param input)

* 修复biomek缺少的字段

* delete 's'

* Remove warnings

* Update biomek.py

* Biomek test

* Update biomek.py

* 新增transfer_biomek的msg

* New transfer_biomek

* Updated transfer_biomek

* 更新transfer_biomek的msg

* 更新transfer_biomek的msg

* 支持Biomek创建

* new action

* fix key name typo

* New parameter for biomek to run.

* Refine

* Update

* new actions

* new actions

* 1

* registry

* fix biomek startup
add action handles

* fix handles not as default entry

* biomek_test.py

biomek_test.py是最新的版本，运行它会生成complete_biomek_protocol.json

* Update biomek.py

* biomek_test.py

* fix liquid_handler.biomek handles

* host node新增resource add时间统计
create_resource新增handle
bump version to 0.9.2

* 修正物料上传时间
改用biomek_test
增加ResultInfoEncoder
支持返回结果上传

* 正确发送return_info结果

* 同步执行状态信息

* 取消raiseValueError提示

* Update biomek_test.py

* 0608 DONE

* 同步了Biomek.py 现在应可用

* biomek switch back to non-test

* temp disable initialize resource

* Refine biomek

* Refine copy issue

* Refine

---------

Co-authored-by: Junhan Chang <changjh@pku.edu.cn>
Co-authored-by: Guangxin Zhang <guangxin.zhang.bio@gmail.com>
Co-authored-by: qxw138 <qxw@stu.pku.edu.cn>

* Device visualization (#39)

* Update README and MQTTClient for installation instructions and code improvements

* feat: 支持local_config启动
add: 增加对crt path的说明，为传入config.py的相对路径
move: web component

* add: registry description

* add 3d visualization

* 完成在main中启动设备可视化

完成在main中启动设备可视化，并输出物料ID：mesh的对应关系resource_model

添加物料模型管理类，遍历物料与resource_model，完成TF数据收集

* 完成TF发布

* 修改模型方向，在yaml中添加变换属性

* 添加物料tf变化时，发送topic到前端

另外修改了物料初始化的方法，防止在tf还未发布时提前建立物料模型与发布话题

* 添加关节发布节点与物料可视化节点进入unilab

* 使用json启动plr与3D模型仿真

* feat: node_info_update srv
fix: OTDeck cant create

* close #12
feat: slave node registry

* feat: show machine name
fix: host node registry not uploaded

* feat: add hplc registry

* feat: add hplc registry

* fix: hplc status typo

* fix: devices/

* 完成启动OT并联动rviz

* add 3d visualization

* 完成在main中启动设备可视化

完成在main中启动设备可视化，并输出物料ID：mesh的对应关系resource_model

添加物料模型管理类，遍历物料与resource_model，完成TF数据收集

* 完成TF发布

* 修改模型方向，在yaml中添加变换属性

* 添加物料tf变化时，发送topic到前端

另外修改了物料初始化的方法，防止在tf还未发布时提前建立物料模型与发布话题

* 添加关节发布节点与物料可视化节点进入unilab

* 使用json启动plr与3D模型仿真

* 完成启动OT并联动rviz

* fix: device.class possible null

* fix: HPLC additions with online service

* fix: slave mode spin not working

* fix: slave mode spin not working

* 修复rviz位置问题,

修复rviz位置问题,
在无tf变动时减缓发送频率
在backend中添加物料跟随方法

* feat: 多ProtocolNode 允许子设备ID相同
feat: 上报发现的ActionClient
feat: Host重启动，通过discover机制要求slaveNode重新注册，实现信息及时上报

* feat: 支持env设置config

* fix: running logic

* fix: running logic

* fix: missing ot

* 在main中直接初始化republisher和物料的mesh节点

* 将joint_republisher和resource_mesh_manager添加进 main_slave_run.py中

* Device visualization (#14)

* add 3d visualization

* 完成在main中启动设备可视化

完成在main中启动设备可视化，并输出物料ID：mesh的对应关系resource_model

添加物料模型管理类，遍历物料与resource_model，完成TF数据收集

* 完成TF发布

* 修改模型方向，在yaml中添加变换属性

* 添加物料tf变化时，发送topic到前端

另外修改了物料初始化的方法，防止在tf还未发布时提前建立物料模型与发布话题

* 添加关节发布节点与物料可视化节点进入unilab

* 使用json启动plr与3D模型仿真

* 完成启动OT并联动rviz

* add 3d visualization

* 完成在main中启动设备可视化

完成在main中启动设备可视化，并输出物料ID：mesh的对应关系resource_model

添加物料模型管理类，遍历物料与resource_model，完成TF数据收集

* 完成TF发布

* 修改模型方向，在yaml中添加变换属性

* 添加物料tf变化时，发送topic到前端

另外修改了物料初始化的方法，防止在tf还未发布时提前建立物料模型与发布话题

* 添加关节发布节点与物料可视化节点进入unilab

* 使用json启动plr与3D模型仿真

* 完成启动OT并联动rviz

* 修复rviz位置问题,

修复rviz位置问题,
在无tf变动时减缓发送频率
在backend中添加物料跟随方法

* fix: running logic

* fix: running logic

* fix: missing ot

* 在main中直接初始化republisher和物料的mesh节点

* 将joint_republisher和resource_mesh_manager添加进 main_slave_run.py中

---------

Co-authored-by: zhangshixiang <@zhangshixiang>
Co-authored-by: wznln <18435084+Xuwznln@users.noreply.github.com>

* fix: missing hostname in devices_names
fix: upload_file for model file

* fix: missing paho-mqtt package
bump version to 0.9.0

* fix startup
add ResourceCreateFromOuter.action

* fix type hint

* update actions

* update actions

* host node add_resource_from_outer
fix cmake list

* pass device config to device class

* add: bind_parent_ids to resource create action
fix: message convert string

* fix: host node should not be re_discovered

* feat: resource tracker support dict

* feat: add more necessary params

* feat: fix boolean null in registry action data

* feat: add outer resource

* 编写mesh添加action

* feat: append resource

* add action

* feat: vis 2d for plr

* fix

* fix: browser on rviz

* fix: cloud bridge error fallback to local

* fix: salve auto run rviz

* 初始化两个plate

* Device visualization (#22)

* add 3d visualization

* 完成在main中启动设备可视化

完成在main中启动设备可视化，并输出物料ID：mesh的对应关系resource_model

添加物料模型管理类，遍历物料与resource_model，完成TF数据收集

* 完成TF发布

* 修改模型方向，在yaml中添加变换属性

* 添加物料tf变化时，发送topic到前端

另外修改了物料初始化的方法，防止在tf还未发布时提前建立物料模型与发布话题

* 添加关节发布节点与物料可视化节点进入unilab

* 使用json启动plr与3D模型仿真

* 完成启动OT并联动rviz

* add 3d visualization

* 完成在main中启动设备可视化

完成在main中启动设备可视化，并输出物料ID：mesh的对应关系resource_model

添加物料模型管理类，遍历物料与resource_model，完成TF数据收集

* 完成TF发布

* 修改模型方向，在yaml中添加变换属性

* 添加物料tf变化时，发送topic到前端

另外修改了物料初始化的方法，防止在tf还未发布时提前建立物料模型与发布话题

* 添加关节发布节点与物料可视化节点进入unilab

* 使用json启动plr与3D模型仿真

* 完成启动OT并联动rviz

* 修复rviz位置问题,

修复rviz位置问题,
在无tf变动时减缓发送频率
在backend中添加物料跟随方法

* fix: running logic

* fix: running logic

* fix: missing ot

* 在main中直接初始化republisher和物料的mesh节点

* 将joint_republisher和resource_mesh_manager添加进 main_slave_run.py中

* 编写mesh添加action

* add action

* fix

* fix: browser on rviz

* fix: cloud bridge error fallback to local

* fix: salve auto run rviz

* 初始化两个plate

---------

Co-authored-by: zhangshixiang <@zhangshixiang>
Co-authored-by: wznln <18435084+Xuwznln@users.noreply.github.com>

* fix: multi channel

* fix: aspirate

* fix: aspirate

* fix: aspirate

* fix: aspirate

* 提交

* fix: jobadd

* fix: jobadd

* fix: msg converter

* tijiao

* add resource creat easy action

* identify debug msg

* mq client id

* 提取lh的joint发布

* unify liquid_handler definition

* 修改物料跟随与物料添加逻辑

修改物料跟随与物料添加逻辑
将joint_publisher类移出lh的backends，但仍需要对lh的backends进行一些改写

* Revert "修改物料跟随与物料添加逻辑"

This reverts commit 498c997ad7.

* Reapply "修改物料跟随与物料添加逻辑"

This reverts commit 3a60d2ae81.

* Revert "Merge remote-tracking branch 'upstream/dev' into device_visualization"

This reverts commit fa727220af, reversing
changes made to 498c997ad7.

* 修改物料放下时的方法，如果选择

修改物料放下时的方法，
如果选择drop_trash，则删除物料显示
如果选择drop，则让其解除连接

* add biomek.py demo implementation

* 更新LiquidHandlerBiomek类，添加资源创建功能，优化协议创建方法，修复部分代码格式问题，更新YAML配置以支持新功能。

* Test

* fix biomek success type

* Convert LH action to biomek.

* Update biomek.py

* 注册表上报handle和schema (param input)

* 修复biomek缺少的字段

* delete 's'

* Remove warnings

* Update biomek.py

* Biomek test

* Update biomek.py

* 新增transfer_biomek的msg

* New transfer_biomek

* Updated transfer_biomek

* 更新transfer_biomek的msg

* 更新transfer_biomek的msg

* 支持Biomek创建

* new action

* fix key name typo

* New parameter for biomek to run.

* Refine

* Update

* new actions

* new actions

* 1

* registry

* fix biomek startup
add action handles

* fix handles not as default entry

* unilab添加moveit启动

1,整合所有moveit节点到一个move_group中，并整合所有的controller依次激活
2,添加pymoveit2的节点，使用json可直接启动
3,修改机械臂规划方式，添加约束，让冗余关节不会进行过多移动

* biomek_test.py

biomek_test.py是最新的版本，运行它会生成complete_biomek_protocol.json

* Update biomek.py

* biomek_test.py

* fix liquid_handler.biomek handles

* 修改物体attach时，多次赋值当前时间导致卡顿问题，

* Revert "修改物体attach时，多次赋值当前时间导致卡顿问题，"

This reverts commit 56d45b94f5.

* Reapply "修改物体attach时，多次赋值当前时间导致卡顿问题，"

This reverts commit 07d9db20c3.

* 添加缺少物料："plate_well_G12",

* host node新增resource add时间统计
create_resource新增handle
bump version to 0.9.2

* 修正物料上传时间
改用biomek_test
增加ResultInfoEncoder
支持返回结果上传

* 正确发送return_info结果

* 同步执行状态信息

* 取消raiseValueError提示

* Update biomek_test.py

* 0608 DONE

* 同步了Biomek.py 现在应可用

* biomek switch back to non-test

* temp disable initialize resource

* add

* fix tip resource data

* liquid states

* change to debug level

* Revert "change to debug level"

This reverts commit 5d9953c3e5.

* Reapply "change to debug level"

This reverts commit 2487bb6ffc.

* fix tip resource data

* add full device

* add moveit yaml

* 修复moveit
增加post_init阶段，给予ros_node反向

* remove necessary node

* fix moveit action client

* remove necessary imports

* Update moveit_interface.py

* fix handler_key uppercase

* json add liquids

* fix setup

* add

* change to "sources" and "targets" for lh

* bump version

* remove parent's parent link

---------

Co-authored-by: Harvey Que <Q-Query@outlook.com>
Co-authored-by: wznln <18435084+Xuwznln@users.noreply.github.com>
Co-authored-by: zhangshixiang <@zhangshixiang>
Co-authored-by: Junhan Chang <changjh@pku.edu.cn>
Co-authored-by: Guangxin Zhang <guangxin.zhang.bio@gmail.com>
Co-authored-by: qxw138 <qxw@stu.pku.edu.cn>

* Device visualization (#41)

* Update README and MQTTClient for installation instructions and code improvements

* feat: 支持local_config启动
add: 增加对crt path的说明，为传入config.py的相对路径
move: web component

* add: registry description

* add 3d visualization

* 完成在main中启动设备可视化

完成在main中启动设备可视化，并输出物料ID：mesh的对应关系resource_model

添加物料模型管理类，遍历物料与resource_model，完成TF数据收集

* 完成TF发布

* 修改模型方向，在yaml中添加变换属性

* 添加物料tf变化时，发送topic到前端

另外修改了物料初始化的方法，防止在tf还未发布时提前建立物料模型与发布话题

* 添加关节发布节点与物料可视化节点进入unilab

* 使用json启动plr与3D模型仿真

* feat: node_info_update srv
fix: OTDeck cant create

* close #12
feat: slave node registry

* feat: show machine name
fix: host node registry not uploaded

* feat: add hplc registry

* feat: add hplc registry

* fix: hplc status typo

* fix: devices/

* 完成启动OT并联动rviz

* add 3d visualization

* 完成在main中启动设备可视化

完成在main中启动设备可视化，并输出物料ID：mesh的对应关系resource_model

添加物料模型管理类，遍历物料与resource_model，完成TF数据收集

* 完成TF发布

* 修改模型方向，在yaml中添加变换属性

* 添加物料tf变化时，发送topic到前端

另外修改了物料初始化的方法，防止在tf还未发布时提前建立物料模型与发布话题

* 添加关节发布节点与物料可视化节点进入unilab

* 使用json启动plr与3D模型仿真

* 完成启动OT并联动rviz

* fix: device.class possible null

* fix: HPLC additions with online service

* fix: slave mode spin not working

* fix: slave mode spin not working

* 修复rviz位置问题,

修复rviz位置问题,
在无tf变动时减缓发送频率
在backend中添加物料跟随方法

* feat: 多ProtocolNode 允许子设备ID相同
feat: 上报发现的ActionClient
feat: Host重启动，通过discover机制要求slaveNode重新注册，实现信息及时上报

* feat: 支持env设置config

* fix: running logic

* fix: running logic

* fix: missing ot

* 在main中直接初始化republisher和物料的mesh节点

* 将joint_republisher和resource_mesh_manager添加进 main_slave_run.py中

* Device visualization (#14)

* add 3d visualization

* 完成在main中启动设备可视化

完成在main中启动设备可视化，并输出物料ID：mesh的对应关系resource_model

添加物料模型管理类，遍历物料与resource_model，完成TF数据收集

* 完成TF发布

* 修改模型方向，在yaml中添加变换属性

* 添加物料tf变化时，发送topic到前端

另外修改了物料初始化的方法，防止在tf还未发布时提前建立物料模型与发布话题

* 添加关节发布节点与物料可视化节点进入unilab

* 使用json启动plr与3D模型仿真

* 完成启动OT并联动rviz

* add 3d visualization

* 完成在main中启动设备可视化

完成在main中启动设备可视化，并输出物料ID：mesh的对应关系resource_model

添加物料模型管理类，遍历物料与resource_model，完成TF数据收集

* 完成TF发布

* 修改模型方向，在yaml中添加变换属性

* 添加物料tf变化时，发送topic到前端

另外修改了物料初始化的方法，防止在tf还未发布时提前建立物料模型与发布话题

* 添加关节发布节点与物料可视化节点进入unilab

* 使用json启动plr与3D模型仿真

* 完成启动OT并联动rviz

* 修复rviz位置问题,

修复rviz位置问题,
在无tf变动时减缓发送频率
在backend中添加物料跟随方法

* fix: running logic

* fix: running logic

* fix: missing ot

* 在main中直接初始化republisher和物料的mesh节点

* 将joint_republisher和resource_mesh_manager添加进 main_slave_run.py中

---------

Co-authored-by: zhangshixiang <@zhangshixiang>
Co-authored-by: wznln <18435084+Xuwznln@users.noreply.github.com>

* fix: missing hostname in devices_names
fix: upload_file for model file

* fix: missing paho-mqtt package
bump version to 0.9.0

* fix startup
add ResourceCreateFromOuter.action

* fix type hint

* update actions

* update actions

* host node add_resource_from_outer
fix cmake list

* pass device config to device class

* add: bind_parent_ids to resource create action
fix: message convert string

* fix: host node should not be re_discovered

* feat: resource tracker support dict

* feat: add more necessary params

* feat: fix boolean null in registry action data

* feat: add outer resource

* 编写mesh添加action

* feat: append resource

* add action

* feat: vis 2d for plr

* fix

* fix: browser on rviz

* fix: cloud bridge error fallback to local

* fix: salve auto run rviz

* 初始化两个plate

* Device visualization (#22)

* add 3d visualization

* 完成在main中启动设备可视化

完成在main中启动设备可视化，并输出物料ID：mesh的对应关系resource_model

添加物料模型管理类，遍历物料与resource_model，完成TF数据收集

* 完成TF发布

* 修改模型方向，在yaml中添加变换属性

* 添加物料tf变化时，发送topic到前端

另外修改了物料初始化的方法，防止在tf还未发布时提前建立物料模型与发布话题

* 添加关节发布节点与物料可视化节点进入unilab

* 使用json启动plr与3D模型仿真

* 完成启动OT并联动rviz

* add 3d visualization

* 完成在main中启动设备可视化

完成在main中启动设备可视化，并输出物料ID：mesh的对应关系resource_model

添加物料模型管理类，遍历物料与resource_model，完成TF数据收集

* 完成TF发布

* 修改模型方向，在yaml中添加变换属性

* 添加物料tf变化时，发送topic到前端

另外修改了物料初始化的方法，防止在tf还未发布时提前建立物料模型与发布话题

* 添加关节发布节点与物料可视化节点进入unilab

* 使用json启动plr与3D模型仿真

* 完成启动OT并联动rviz

* 修复rviz位置问题,

修复rviz位置问题,
在无tf变动时减缓发送频率
在backend中添加物料跟随方法

* fix: running logic

* fix: running logic

* fix: missing ot

* 在main中直接初始化republisher和物料的mesh节点

* 将joint_republisher和resource_mesh_manager添加进 main_slave_run.py中

* 编写mesh添加action

* add action

* fix

* fix: browser on rviz

* fix: cloud bridge error fallback to local

* fix: salve auto run rviz

* 初始化两个plate

---------

Co-authored-by: zhangshixiang <@zhangshixiang>
Co-authored-by: wznln <18435084+Xuwznln@users.noreply.github.com>

* fix: multi channel

* fix: aspirate

* fix: aspirate

* fix: aspirate

* fix: aspirate

* 提交

* fix: jobadd

* fix: jobadd

* fix: msg converter

* tijiao

* add resource creat easy action

* identify debug msg

* mq client id

* 提取lh的joint发布

* unify liquid_handler definition

* 修改物料跟随与物料添加逻辑

修改物料跟随与物料添加逻辑
将joint_publisher类移出lh的backends，但仍需要对lh的backends进行一些改写

* Revert "修改物料跟随与物料添加逻辑"

This reverts commit 498c997ad7.

* Reapply "修改物料跟随与物料添加逻辑"

This reverts commit 3a60d2ae81.

* Revert "Merge remote-tracking branch 'upstream/dev' into device_visualization"

This reverts commit fa727220af, reversing
changes made to 498c997ad7.

* 修改物料放下时的方法，如果选择

修改物料放下时的方法，
如果选择drop_trash，则删除物料显示
如果选择drop，则让其解除连接

* add biomek.py demo implementation

* 更新LiquidHandlerBiomek类，添加资源创建功能，优化协议创建方法，修复部分代码格式问题，更新YAML配置以支持新功能。

* Test

* fix biomek success type

* Convert LH action to biomek.

* Update biomek.py

* 注册表上报handle和schema (param input)

* 修复biomek缺少的字段

* delete 's'

* Remove warnings

* Update biomek.py

* Biomek test

* Update biomek.py

* 新增transfer_biomek的msg

* New transfer_biomek

* Updated transfer_biomek

* 更新transfer_biomek的msg

* 更新transfer_biomek的msg

* 支持Biomek创建

* new action

* fix key name typo

* New parameter for biomek to run.

* Refine

* Update

* new actions

* new actions

* 1

* registry

* fix biomek startup
add action handles

* fix handles not as default entry

* unilab添加moveit启动

1,整合所有moveit节点到一个move_group中，并整合所有的controller依次激活
2,添加pymoveit2的节点，使用json可直接启动
3,修改机械臂规划方式，添加约束，让冗余关节不会进行过多移动

* biomek_test.py

biomek_test.py是最新的版本，运行它会生成complete_biomek_protocol.json

* Update biomek.py

* biomek_test.py

* fix liquid_handler.biomek handles

* 修改物体attach时，多次赋值当前时间导致卡顿问题，

* Revert "修改物体attach时，多次赋值当前时间导致卡顿问题，"

This reverts commit 56d45b94f5.

* Reapply "修改物体attach时，多次赋值当前时间导致卡顿问题，"

This reverts commit 07d9db20c3.

* 添加缺少物料："plate_well_G12",

* host node新增resource add时间统计
create_resource新增handle
bump version to 0.9.2

* 修正物料上传时间
改用biomek_test
增加ResultInfoEncoder
支持返回结果上传

* 正确发送return_info结果

* 同步执行状态信息

* 取消raiseValueError提示

* Update biomek_test.py

* 0608 DONE

* 同步了Biomek.py 现在应可用

* biomek switch back to non-test

* temp disable initialize resource

* add

* fix tip resource data

* liquid states

* change to debug level

* Revert "change to debug level"

This reverts commit 5d9953c3e5.

* Reapply "change to debug level"

This reverts commit 2487bb6ffc.

* fix tip resource data

* add full device

* add moveit yaml

* 修复moveit
增加post_init阶段，给予ros_node反向

* remove necessary node

* fix moveit action client

* remove necessary imports

* Update moveit_interface.py

* fix handler_key uppercase

* json add liquids

* fix setup

* add

* change to "sources" and "targets" for lh

* bump version

* remove parent's parent link

* change arm's name

* change name

---------

Co-authored-by: Harvey Que <Q-Query@outlook.com>
Co-authored-by: zhangshixiang <@zhangshixiang>
Co-authored-by: q434343 <73513873+q434343@users.noreply.github.com>
Co-authored-by: Junhan Chang <changjh@pku.edu.cn>
Co-authored-by: Guangxin Zhang <guangxin.zhang.bio@gmail.com>
Co-authored-by: qxw138 <qxw@stu.pku.edu.cn>

* fix move it

* fix move it

* create_resource

* bump ver
modify slot type

* 增加modbus支持
调整protocol node以更好支持多种类型的read和write

* 调整protocol node以更好支持多种类型的read和write

* 补充日志

* Device visualization (#42)

* Update README and MQTTClient for installation instructions and code improvements

* feat: 支持local_config启动
add: 增加对crt path的说明，为传入config.py的相对路径
move: web component

* add: registry description

* add 3d visualization

* 完成在main中启动设备可视化

完成在main中启动设备可视化，并输出物料ID：mesh的对应关系resource_model

添加物料模型管理类，遍历物料与resource_model，完成TF数据收集

* 完成TF发布

* 修改模型方向，在yaml中添加变换属性

* 添加物料tf变化时，发送topic到前端

另外修改了物料初始化的方法，防止在tf还未发布时提前建立物料模型与发布话题

* 添加关节发布节点与物料可视化节点进入unilab

* 使用json启动plr与3D模型仿真

* feat: node_info_update srv
fix: OTDeck cant create

* close #12
feat: slave node registry

* feat: show machine name
fix: host node registry not uploaded

* feat: add hplc registry

* feat: add hplc registry

* fix: hplc status typo

* fix: devices/

* 完成启动OT并联动rviz

* add 3d visualization

* 完成在main中启动设备可视化

完成在main中启动设备可视化，并输出物料ID：mesh的对应关系resource_model

添加物料模型管理类，遍历物料与resource_model，完成TF数据收集

* 完成TF发布

* 修改模型方向，在yaml中添加变换属性

* 添加物料tf变化时，发送topic到前端

另外修改了物料初始化的方法，防止在tf还未发布时提前建立物料模型与发布话题

* 添加关节发布节点与物料可视化节点进入unilab

* 使用json启动plr与3D模型仿真

* 完成启动OT并联动rviz

* fix: device.class possible null

* fix: HPLC additions with online service

* fix: slave mode spin not working

* fix: slave mode spin not working

* 修复rviz位置问题,

修复rviz位置问题,
在无tf变动时减缓发送频率
在backend中添加物料跟随方法

* feat: 多ProtocolNode 允许子设备ID相同
feat: 上报发现的ActionClient
feat: Host重启动，通过discover机制要求slaveNode重新注册，实现信息及时上报

* feat: 支持env设置config

* fix: running logic

* fix: running logic

* fix: missing ot

* 在main中直接初始化republisher和物料的mesh节点

* 将joint_republisher和resource_mesh_manager添加进 main_slave_run.py中

* Device visualization (#14)

* add 3d visualization

* 完成在main中启动设备可视化

完成在main中启动设备可视化，并输出物料ID：mesh的对应关系resource_model

添加物料模型管理类，遍历物料与resource_model，完成TF数据收集

* 完成TF发布

* 修改模型方向，在yaml中添加变换属性

* 添加物料tf变化时，发送topic到前端

另外修改了物料初始化的方法，防止在tf还未发布时提前建立物料模型与发布话题

* 添加关节发布节点与物料可视化节点进入unilab

* 使用json启动plr与3D模型仿真

* 完成启动OT并联动rviz

* add 3d visualization

* 完成在main中启动设备可视化

完成在main中启动设备可视化，并输出物料ID：mesh的对应关系resource_model

添加物料模型管理类，遍历物料与resource_model，完成TF数据收集

* 完成TF发布

* 修改模型方向，在yaml中添加变换属性

* 添加物料tf变化时，发送topic到前端

另外修改了物料初始化的方法，防止在tf还未发布时提前建立物料模型与发布话题

* 添加关节发布节点与物料可视化节点进入unilab

* 使用json启动plr与3D模型仿真

* 完成启动OT并联动rviz

* 修复rviz位置问题,

修复rviz位置问题,
在无tf变动时减缓发送频率
在backend中添加物料跟随方法

* fix: running logic

* fix: running logic

* fix: missing ot

* 在main中直接初始化republisher和物料的mesh节点

* 将joint_republisher和resource_mesh_manager添加进 main_slave_run.py中

---------

Co-authored-by: zhangshixiang <@zhangshixiang>
Co-authored-by: wznln <18435084+Xuwznln@users.noreply.github.com>

* fix: missing hostname in devices_names
fix: upload_file for model file

* fix: missing paho-mqtt package
bump version to 0.9.0

* fix startup
add ResourceCreateFromOuter.action

* fix type hint

* update actions

* update actions

* host node add_resource_from_outer
fix cmake list

* pass device config to device class

* add: bind_parent_ids to resource create action
fix: message convert string

* fix: host node should not be re_discovered

* feat: resource tracker support dict

* feat: add more necessary params

* feat: fix boolean null in registry action data

* feat: add outer resource

* 编写mesh添加action

* feat: append resource

* add action

* feat: vis 2d for plr

* fix

* fix: browser on rviz

* fix: cloud bridge error fallback to local

* fix: salve auto run rviz

* 初始化两个plate

* Device visualization (#22)

* add 3d visualization

* 完成在main中启动设备可视化

完成在main中启动设备可视化，并输出物料ID：mesh的对应关系resource_model

添加物料模型管理类，遍历物料与resource_model，完成TF数据收集

* 完成TF发布

* 修改模型方向，在yaml中添加变换属性

* 添加物料tf变化时，发送topic到前端

另外修改了物料初始化的方法，防止在tf还未发布时提前建立物料模型与发布话题

* 添加关节发布节点与物料可视化节点进入unilab

* 使用json启动plr与3D模型仿真

* 完成启动OT并联动rviz

* add 3d visualization

* 完成在main中启动设备可视化

完成在main中启动设备可视化，并输出物料ID：mesh的对应关系resource_model

添加物料模型管理类，遍历物料与resource_model，完成TF数据收集

* 完成TF发布

* 修改模型方向，在yaml中添加变换属性

* 添加物料tf变化时，发送topic到前端

另外修改了物料初始化的方法，防止在tf还未发布时提前建立物料模型与发布话题

* 添加关节发布节点与物料可视化节点进入unilab

* 使用json启动plr与3D模型仿真

* 完成启动OT并联动rviz

* 修复rviz位置问题,

修复rviz位置问题,
在无tf变动时减缓发送频率
在backend中添加物料跟随方法

* fix: running logic

* fix: running logic

* fix: missing ot

* 在main中直接初始化republisher和物料的mesh节点

* 将joint_republisher和resource_mesh_manager添加进 main_slave_run.py中

* 编写mesh添加action

* add action

* fix

* fix: browser on rviz

* fix: cloud bridge error fallback to local

* fix: salve auto run rviz

* 初始化两个plate

---------

Co-authored-by: zhangshixiang <@zhangshixiang>
Co-authored-by: wznln <18435084+Xuwznln@users.noreply.github.com>

* fix: multi channel

* fix: aspirate

* fix: aspirate

* fix: aspirate

* fix: aspirate

* 提交

* fix: jobadd

* fix: jobadd

* fix: msg converter

* tijiao

* add resource creat easy action

* identify debug msg

* mq client id

* 提取lh的joint发布

* unify liquid_handler definition

* 修改物料跟随与物料添加逻辑

修改物料跟随与物料添加逻辑
将joint_publisher类移出lh的backends，但仍需要对lh的backends进行一些改写

* Revert "修改物料跟随与物料添加逻辑"

This reverts commit 498c997ad7.

* Reapply "修改物料跟随与物料添加逻辑"

This reverts commit 3a60d2ae81.

* Revert "Merge remote-tracking branch 'upstream/dev' into device_visualization"

This reverts commit fa727220af, reversing
changes made to 498c997ad7.

* 修改物料放下时的方法，如果选择

修改物料放下时的方法，
如果选择drop_trash，则删除物料显示
如果选择drop，则让其解除连接

* unilab添加moveit启动

1,整合所有moveit节点到一个move_group中，并整合所有的controller依次激活
2,添加pymoveit2的节点，使用json可直接启动
3,修改机械臂规划方式，添加约束，让冗余关节不会进行过多移动

* 修改物体attach时，多次赋值当前时间导致卡顿问题，

* Revert "修改物体attach时，多次赋值当前时间导致卡顿问题，"

This reverts commit 56d45b94f5.

* Reapply "修改物体attach时，多次赋值当前时间导致卡顿问题，"

This reverts commit 07d9db20c3.

* 添加缺少物料："plate_well_G12",

* add

* fix tip resource data

* liquid states

* change to debug level

* Revert "change to debug level"

This reverts commit 5d9953c3e5.

* Reapply "change to debug level"

This reverts commit 2487bb6ffc.

* fix tip resource data

* add full device

* add moveit yaml

* 修复moveit
增加post_init阶段，给予ros_node反向

* remove necessary node

* fix moveit action client

* remove necessary imports

* Update moveit_interface.py

* fix handler_key uppercase

* json add liquids

* fix setup

* add

* change to "sources" and "targets" for lh

* bump version

* remove parent's parent link

* change arm's name

* change name

* fix ik error

---------

Co-authored-by: Harvey Que <Q-Query@outlook.com>
Co-authored-by: zhangshixiang <@zhangshixiang>
Co-authored-by: q434343 <73513873+q434343@users.noreply.github.com>
Co-authored-by: Junhan Chang <changjh@pku.edu.cn>

* Add Mock Device for Organic Synthesis\添加有机合成的虚拟仪器和Protocol (#43)

* Add Device MockChiller

Add device MockChiller

* Add Device MockFilter

* Add Device MockPump

* Add Device MockRotavap

* Add Device MockSeparator

* Add Device MockStirrer

* Add Device MockHeater

* Add Device MockVacuum

* Add Device MockSolenoidValve

* Add Device Mock \_init_.py

* 规范模拟设备代码与注册表信息

* 更改Mock大写文件夹名

* 删除大写目录

* Edited Mock device json

* Match mock device with action

* Edit mock device yaml

* Add new action

* Add Virtual Device, Action, YAML, Protocol for Organic Syn

* 单独分类测试的protocol文件夹

* 更名Action

---------

Co-authored-by: Xuwznln <18435084+Xuwznln@users.noreply.github.com>

* bump version & protocol fix

* hotfix: Add macos_sdk_config (#46)

Co-authored-by: quehh <scienceol@outlook.com>

* include device_mesh when pip install

* 测试自动构建

* try build fix

* try build

* test artifacts

* hotfix: Add .certs in .gitignore

* create container

* container 添加和更新完成

* Device registry port (#49)

* Update README and MQTTClient for installation instructions and code improvements

* feat: 支持local_config启动
add: 增加对crt path的说明，为传入config.py的相对路径
move: web component

* add: registry description

* add 3d visualization

* 完成在main中启动设备可视化

完成在main中启动设备可视化，并输出物料ID：mesh的对应关系resource_model

添加物料模型管理类，遍历物料与resource_model，完成TF数据收集

* 完成TF发布

* 修改模型方向，在yaml中添加变换属性

* 添加物料tf变化时，发送topic到前端

另外修改了物料初始化的方法，防止在tf还未发布时提前建立物料模型与发布话题

* 添加关节发布节点与物料可视化节点进入unilab

* 使用json启动plr与3D模型仿真

* feat: node_info_update srv
fix: OTDeck cant create

* close #12
feat: slave node registry

* feat: show machine name
fix: host node registry not uploaded

* feat: add hplc registry

* feat: add hplc registry

* fix: hplc status typo

* fix: devices/

* 完成启动OT并联动rviz

* add 3d visualization

* 完成在main中启动设备可视化

完成在main中启动设备可视化，并输出物料ID：mesh的对应关系resource_model

添加物料模型管理类，遍历物料与resource_model，完成TF数据收集

* 完成TF发布

* 修改模型方向，在yaml中添加变换属性

* 添加物料tf变化时，发送topic到前端

另外修改了物料初始化的方法，防止在tf还未发布时提前建立物料模型与发布话题

* 添加关节发布节点与物料可视化节点进入unilab

* 使用json启动plr与3D模型仿真

* 完成启动OT并联动rviz

* fix: device.class possible null

* fix: HPLC additions with online service

* fix: slave mode spin not working

* fix: slave mode spin not working

* 修复rviz位置问题,

修复rviz位置问题,
在无tf变动时减缓发送频率
在backend中添加物料跟随方法

* feat: 多ProtocolNode 允许子设备ID相同
feat: 上报发现的ActionClient
feat: Host重启动，通过discover机制要求slaveNode重新注册，实现信息及时上报

* feat: 支持env设置config

* fix: running logic

* fix: running logic

* fix: missing ot

* 在main中直接初始化republisher和物料的mesh节点

* 将joint_republisher和resource_mesh_manager添加进 main_slave_run.py中

* Device visualization (#14)

* add 3d visualization

* 完成在main中启动设备可视化

完成在main中启动设备可视化，并输出物料ID：mesh的对应关系resource_model

添加物料模型管理类，遍历物料与resource_model，完成TF数据收集

* 完成TF发布

* 修改模型方向，在yaml中添加变换属性

* 添加物料tf变化时，发送topic到前端

另外修改了物料初始化的方法，防止在tf还未发布时提前建立物料模型与发布话题

* 添加关节发布节点与物料可视化节点进入unilab

* 使用json启动plr与3D模型仿真

* 完成启动OT并联动rviz

* add 3d visualization

* 完成在main中启动设备可视化

完成在main中启动设备可视化，并输出物料ID：mesh的对应关系resource_model

添加物料模型管理类，遍历物料与resource_model，完成TF数据收集

* 完成TF发布

* 修改模型方向，在yaml中添加变换属性

* 添加物料tf变化时，发送topic到前端

另外修改了物料初始化的方法，防止在tf还未发布时提前建立物料模型与发布话题

* 添加关节发布节点与物料可视化节点进入unilab

* 使用json启动plr与3D模型仿真

* 完成启动OT并联动rviz

* 修复rviz位置问题,

修复rviz位置问题,
在无tf变动时减缓发送频率
在backend中添加物料跟随方法

* fix: running logic

* fix: running logic

* fix: missing ot

* 在main中直接初始化republisher和物料的mesh节点

* 将joint_republisher和resource_mesh_manager添加进 main_slave_run.py中

---------

Co-authored-by: zhangshixiang <@zhangshixiang>
Co-authored-by: wznln <18435084+Xuwznln@users.noreply.github.com>

* fix: missing hostname in devices_names
fix: upload_file for model file

* fix: missing paho-mqtt package
bump version to 0.9.0

* fix startup
add ResourceCreateFromOuter.action

* fix type hint

* update actions

* update actions

* host node add_resource_from_outer
fix cmake list

* pass device config to device class

* add: bind_parent_ids to resource create action
fix: message convert string

* fix: host node should not be re_discovered

* feat: resource tracker support dict

* feat: add more necessary params

* feat: fix boolean null in registry action data

* feat: add outer resource

* 编写mesh添加action

* feat: append resource

* add action

* feat: vis 2d for plr

* fix

* fix: browser on rviz

* fix: cloud bridge error fallback to local

* fix: salve auto run rviz

* 初始化两个plate

* Device visualization (#22)

* add 3d visualization

* 完成在main中启动设备可视化

完成在main中启动设备可视化，并输出物料ID：mesh的对应关系resource_model

添加物料模型管理类，遍历物料与resource_model，完成TF数据收集

* 完成TF发布

* 修改模型方向，在yaml中添加变换属性

* 添加物料tf变化时，发送topic到前端

另外修改了物料初始化的方法，防止在tf还未发布时提前建立物料模型与发布话题

* 添加关节发布节点与物料可视化节点进入unilab

* 使用json启动plr与3D模型仿真

* 完成启动OT并联动rviz

* add 3d visualization

* 完成在main中启动设备可视化

完成在main中启动设备可视化，并输出物料ID：mesh的对应关系resource_model

添加物料模型管理类，遍历物料与resource_model，完成TF数据收集

* 完成TF发布

* 修改模型方向，在yaml中添加变换属性

* 添加物料tf变化时，发送topic到前端

另外修改了物料初始化的方法，防止在tf还未发布时提前建立物料模型与发布话题

* 添加关节发布节点与物料可视化节点进入unilab

* 使用json启动plr与3D模型仿真

* 完成启动OT并联动rviz

* 修复rviz位置问题,

修复rviz位置问题,
在无tf变动时减缓发送频率
在backend中添加物料跟随方法

* fix: running logic

* fix: running logic

* fix: missing ot

* 在main中直接初始化republisher和物料的mesh节点

* 将joint_republisher和resource_mesh_manager添加进 main_slave_run.py中

* 编写mesh添加action

* add action

* fix

* fix: browser on rviz

* fix: cloud bridge error fallback to local

* fix: salve auto run rviz

* 初始化两个plate

---------

Co-authored-by: zhangshixiang <@zhangshixiang>
Co-authored-by: wznln <18435084+Xuwznln@users.noreply.github.com>

* fix: multi channel

* fix: aspirate

* fix: aspirate

* fix: aspirate

* fix: aspirate

* 提交

* fix: jobadd

* fix: jobadd

* fix: msg converter

* tijiao

* add resource creat easy action

* identify debug msg

* mq client id

* unify liquid_handler definition

* Update virtual_device.yaml

* 更正了stir和heater的连接方式

* 区分了虚拟仪器中的八通阀和电磁阀，添加了两个阀门的驱动

* 修改了add protocol

* 修复了阀门更新版的bug

* 修复了添加protocol前缀导致的不能启动的bug

* Fix handles

* bump version to 0.9.6

* add resource edge upload

* update container registry and handles

* add virtual_separator virtual_rotavap
fix transfer_pump

* fix container value
add parent_name to edge device id

* 大图的问题都修复好了，添加了gassource和vacuum pump的驱动以及注册表

* default resource upload mode is false

* 添加了icon的文件名在注册表里面

* 修改了json图中link的格式

* fix resource and edge upload

* fix device ports

* Fix edge id

* 移除device的父节点关联

* separate registry sync and resource_add

* 默认不进行注册表报送，通过命令unilabos-register或者增加启动参数

* 完善tip

* protocol node不再嵌套显示

* bump version to 0.9.7  新增一个测试PumpTransferProtocol的teststation，亲测可以运行，将八通阀们和转移泵与pump_protocol适配

* protocol node 执行action不应携带自身device id

* 添加了一套简易双八通阀工作站JSON，亲测能跑

* 修复了很多protocol，亲测能跑

* 添加了run column和filter through的protocol，亲测能跑

* fix mock_reactor

* 修改了大图和小图的json，但是在前端上没看到改变

---------

Co-authored-by: Harvey Que <Q-Query@outlook.com>
Co-authored-by: wznln <18435084+Xuwznln@users.noreply.github.com>
Co-authored-by: zhangshixiang <@zhangshixiang>
Co-authored-by: q434343 <73513873+q434343@users.noreply.github.com>
Co-authored-by: Junhan Chang <changjh@pku.edu.cn>

---------

Co-authored-by: Junhan Chang <changjh@pku.edu.cn>
Co-authored-by: Guangxin Zhang <guangxin.zhang.bio@gmail.com>
Co-authored-by: qxw138 <qxw@stu.pku.edu.cn>
Co-authored-by: q434343 <73513873+q434343@users.noreply.github.com>
Co-authored-by: Harvey Que <Q-Query@outlook.com>
Co-authored-by: Kongchang Feng <2100011801@stu.pku.edu.cn>
Co-authored-by: hh. <103566763+Mile-Away@users.noreply.github.com>
Co-authored-by: quehh <scienceol@outlook.com>
Co-authored-by: Harvey Que <quehaohui@dp.tech>

test/commands/resource_add.md

@@ -2,4 +2,10 @@
 
 ```bash
 ros2 action send_goal /devices/host_node/create_resource_detailed unilabos_msgs/action/_resource_create_from_outer/ResourceCreateFromOuter "{ resources: [ { 'category': '', 'children': [], 'config': { 'type': 'Well', 'size_x': 6.86, 'size_y': 6.86, 'size_z': 10.67, 'rotation': { 'x': 0, 'y': 0, 'z': 0, 'type': 'Rotation' }, 'category': 'well', 'model': null, 'max_volume': 360, 'material_z_thickness': 0.5, 'compute_volume_from_height': null, 'compute_height_from_volume': null, 'bottom_type': 'flat', 'cross_section_type': 'circle' }, 'data': { 'liquids': [], 'pending_liquids': [], 'liquid_history': [] }, 'id': 'plate_well_11_7', 'name': 'plate_well_11_7', 'pose': { 'orientation': { 'w': 1.0, 'x': 0.0, 'y': 0.0, 'z': 0.0 }, 'position': { 'x': 0.0, 'y': 0.0, 'z': 0.0 } }, 'sample_id': '', 'parent': 'plate', 'type': 'device' } ], device_ids: [ 'PLR_STATION' ], bind_parent_ids: [ 'plate' ], bind_locations: [ { 'x': 0.0, 'y': 0.0, 'z': 0.0 } ], other_calling_params: [ '{}' ] }"
+```
+
+使用mock_all.json启动，重新捕获MockContainerForChiller1
+
+```bash
+ros2 action send_goal /devices/host_node/create_resource unilabos_msgs/action/_resource_create_from_outer_easy/ResourceCreateFromOuterEasy "{ 'res_id': 'MockContainerForChiller1', 'device_id': 'MockChiller1', 'class_name': 'container', 'parent': 'MockChiller1', 'bind_locations': { 'x': 0.0, 'y': 0.0, 'z': 0.0 }, 'liquid_input_slot': [ -1 ], 'liquid_type': [ 'CuCl2' ], 'liquid_volume': [ 100.0 ], 'slot_on_deck': '' }"
 ```

test/experiments/Protocol_Test_Station/add_protocol_test_station.json

@@ -0,0 +1,563 @@
+{
+    "nodes": [
+        {
+            "id": "AddProtocolTestStation",
+            "name": "添加协议测试站",
+            "children": [
+                "transfer_pump_1",
+                "transfer_pump_2", 
+                "multiway_valve_1",
+                "multiway_valve_2",
+                "stirrer_1",
+                "stirrer_2",
+                "flask_DMF",
+                "flask_ethyl_acetate", 
+                "flask_methanol",
+                "flask_acetone",
+                "flask_water",
+                "flask_air",
+                "main_reactor",
+                "secondary_reactor",
+                "waste_workup",
+                "collection_bottle_1",
+                "collection_bottle_2"
+            ],
+            "parent": null,
+            "type": "device",
+            "class": "workstation",
+            "position": {
+                "x": 500,
+                "y": 200,
+                "z": 0
+            },
+            "config": {
+                "protocol_type": ["PumpTransferProtocol", "AddProtocol"]
+            },
+            "data": {}
+        },
+        {
+            "id": "transfer_pump_1",
+            "name": "转移泵1",
+            "children": [],
+            "parent": "AddProtocolTestStation",
+            "type": "device",
+            "class": "virtual_transfer_pump",
+            "position": {
+                "x": 250,
+                "y": 300,
+                "z": 0
+            },
+            "config": {
+                "port": "VIRTUAL_PUMP1",
+                "max_volume": 25.0,
+                "transfer_rate": 5.0
+            },
+            "data": {
+                "position": 0.0,
+                "status": "Idle"
+            }
+        },
+        {
+            "id": "transfer_pump_2",
+            "name": "转移泵2",
+            "children": [],
+            "parent": "AddProtocolTestStation",
+            "type": "device",
+            "class": "virtual_transfer_pump",
+            "position": {
+                "x": 750,
+                "y": 300,
+                "z": 0
+            },
+            "config": {
+                "port": "VIRTUAL_PUMP2",
+                "max_volume": 25.0,
+                "transfer_rate": 5.0
+            },
+            "data": {
+                "position": 0.0,
+                "status": "Idle"
+            }
+        },
+        {
+            "id": "multiway_valve_1",
+            "name": "试剂分配阀",
+            "children": [],
+            "parent": "AddProtocolTestStation",
+            "type": "device",
+            "class": "virtual_multiway_valve",
+            "position": {
+                "x": 250,
+                "y": 400,
+                "z": 0
+            },
+            "config": {
+                "port": "VIRTUAL_VALVE1",
+                "positions": 8
+            },
+            "data": {
+                "current_position": 1
+            }
+        },
+        {
+            "id": "multiway_valve_2",
+            "name": "反应器分配阀",
+            "children": [],
+            "parent": "AddProtocolTestStation",
+            "type": "device",
+            "class": "virtual_multiway_valve",
+            "position": {
+                "x": 750,
+                "y": 400,
+                "z": 0
+            },
+            "config": {
+                "port": "VIRTUAL_VALVE2",
+                "positions": 8
+            },
+            "data": {
+                "current_position": 1
+            }
+        },
+        {
+            "id": "stirrer_1",
+            "name": "主反应器搅拌器",
+            "children": [],
+            "parent": "AddProtocolTestStation",
+            "type": "device",
+            "class": "virtual_stirrer",
+            "position": {
+                "x": 600,
+                "y": 450,
+                "z": 0
+            },
+            "config": {
+                "port": "VIRTUAL_STIRRER1",
+                "max_speed": 1500.0,
+                "default_speed": 300.0
+            },
+            "data": {
+                "speed": 0.0,
+                "status": "Stopped"
+            }
+        },
+        {
+            "id": "stirrer_2",
+            "name": "副反应器搅拌器",
+            "children": [],
+            "parent": "AddProtocolTestStation",
+            "type": "device",
+            "class": "virtual_stirrer",
+            "position": {
+                "x": 900,
+                "y": 450,
+                "z": 0
+            },
+            "config": {
+                "port": "VIRTUAL_STIRRER2",
+                "max_speed": 1500.0,
+                "default_speed": 300.0
+            },
+            "data": {
+                "speed": 0.0,
+                "status": "Stopped"
+            }
+        },
+        {
+            "id": "flask_DMF",
+            "name": "DMF试剂瓶",
+            "children": [],
+            "parent": "AddProtocolTestStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 50,
+                "y": 550,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 1000.0
+            },
+            "data": {
+                "liquid": [
+                    {
+                        "liquid_type": "DMF",
+                        "liquid_volume": 800.0
+                    }
+                ]
+            }
+        },
+        {
+            "id": "flask_ethyl_acetate",
+            "name": "乙酸乙酯试剂瓶",
+            "children": [],
+            "parent": "AddProtocolTestStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 150,
+                "y": 550,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 1000.0
+            },
+            "data": {
+                "liquid": [
+                    {
+                        "liquid_type": "ethyl_acetate",
+                        "liquid_volume": 800.0
+                    }
+                ]
+            }
+        },
+        {
+            "id": "flask_methanol",
+            "name": "甲醇试剂瓶",
+            "children": [],
+            "parent": "AddProtocolTestStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 250,
+                "y": 550,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 1000.0
+            },
+            "data": {
+                "liquid": [
+                    {
+                        "liquid_type": "methanol",
+                        "liquid_volume": 800.0
+                    }
+                ]
+            }
+        },
+        {
+            "id": "flask_acetone",
+            "name": "丙酮试剂瓶",
+            "children": [],
+            "parent": "AddProtocolTestStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 350,
+                "y": 550,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 1000.0
+            },
+            "data": {
+                "liquid": [
+                    {
+                        "liquid_type": "acetone",
+                        "liquid_volume": 800.0
+                    }
+                ]
+            }
+        },
+        {
+            "id": "flask_water",
+            "name": "蒸馏水瓶",
+            "children": [],
+            "parent": "AddProtocolTestStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 450,
+                "y": 550,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 1000.0
+            },
+            "data": {
+                "liquid": [
+                    {
+                        "liquid_type": "water",
+                        "liquid_volume": 800.0
+                    }
+                ]
+            }
+        },
+        {
+            "id": "flask_air",
+            "name": "空气瓶",
+            "children": [],
+            "parent": "AddProtocolTestStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 550,
+                "y": 550,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 1000.0
+            },
+            "data": {
+                "liquid": []
+            }
+        },
+        {
+            "id": "main_reactor",
+            "name": "主反应器",
+            "children": [],
+            "parent": "AddProtocolTestStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 600,
+                "y": 500,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 2000.0
+            },
+            "data": {
+                "liquid": []
+            }
+        },
+        {
+            "id": "secondary_reactor",
+            "name": "副反应器",
+            "children": [],
+            "parent": "AddProtocolTestStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 900,
+                "y": 500,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 1000.0
+            },
+            "data": {
+                "liquid": []
+            }
+        },
+        {
+            "id": "waste_workup",
+            "name": "废液处理瓶",
+            "children": [],
+            "parent": "AddProtocolTestStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 700,
+                "y": 600,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 2000.0
+            },
+            "data": {
+                "liquid": []
+            }
+        },
+        {
+            "id": "collection_bottle_1",
+            "name": "收集瓶1",
+            "children": [],
+            "parent": "AddProtocolTestStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 800,
+                "y": 600,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 1000.0
+            },
+            "data": {
+                "liquid": []
+            }
+        },
+        {
+            "id": "collection_bottle_2",
+            "name": "收集瓶2",
+            "children": [],
+            "parent": "AddProtocolTestStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 900,
+                "y": 600,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 1000.0
+            },
+            "data": {
+                "liquid": []
+            }
+        }
+    ],
+    "links": [
+        {
+            "id": "link_pump1_valve1",
+            "source": "transfer_pump_1",
+            "target": "multiway_valve_1",
+            "type": "fluid",
+            "port": {
+                "transfer_pump_1": "transferpump",
+                "multiway_valve_1": "transferpump"
+            }
+        },
+        {
+            "id": "link_pump2_valve2",
+            "source": "transfer_pump_2",
+            "target": "multiway_valve_2",
+            "type": "fluid",
+            "port": {
+                "transfer_pump_2": "transferpump",
+                "multiway_valve_2": "transferpump"
+            }
+        },
+        {
+            "id": "link_valve1_valve2",
+            "source": "multiway_valve_1",
+            "target": "multiway_valve_2",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_1": "8",
+                "multiway_valve_2": "1"
+            }
+        },
+        {
+            "id": "link_valve1_DMF",
+            "source": "multiway_valve_1",
+            "target": "flask_DMF",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_1": "1",
+                "flask_DMF": "outlet"
+            }
+        },
+        {
+            "id": "link_valve1_ethyl_acetate",
+            "source": "multiway_valve_1",
+            "target": "flask_ethyl_acetate",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_1": "2",
+                "flask_ethyl_acetate": "outlet"
+            }
+        },
+        {
+            "id": "link_valve1_methanol",
+            "source": "multiway_valve_1",
+            "target": "flask_methanol",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_1": "3",
+                "flask_methanol": "outlet"
+            }
+        },
+        {
+            "id": "link_valve1_acetone",
+            "source": "multiway_valve_1",
+            "target": "flask_acetone",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_1": "4",
+                "flask_acetone": "outlet"
+            }
+        },
+        {
+            "id": "link_valve1_water",
+            "source": "multiway_valve_1",
+            "target": "flask_water",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_1": "5",
+                "flask_water": "outlet"
+            }
+        },
+        {
+            "id": "link_valve1_air",
+            "source": "multiway_valve_1",
+            "target": "flask_air",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_1": "6",
+                "flask_air": "top"
+            }
+        },
+        {
+            "id": "link_valve2_main_reactor",
+            "source": "multiway_valve_2",
+            "target": "main_reactor",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_2": "2",
+                "main_reactor": "inlet"
+            }
+        },
+        {
+            "id": "link_valve2_secondary_reactor",
+            "source": "multiway_valve_2",
+            "target": "secondary_reactor",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_2": "3",
+                "secondary_reactor": "inlet"
+            }
+        },
+        {
+            "id": "link_valve2_waste",
+            "source": "multiway_valve_2",
+            "target": "waste_workup",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_2": "6",
+                "waste_workup": "inlet"
+            }
+        },
+        {
+            "id": "link_valve2_collection1",
+            "source": "multiway_valve_2",
+            "target": "collection_bottle_1",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_2": "7",
+                "collection_bottle_1": "inlet"
+            }
+        },
+        {
+            "id": "link_valve2_collection2",
+            "source": "multiway_valve_2",
+            "target": "collection_bottle_2",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_2": "8",
+                "collection_bottle_2": "inlet"
+            }
+        },
+        {
+            "id": "link_stirrer1_main_reactor",
+            "source": "stirrer_1",
+            "target": "main_reactor",
+            "type": "mechanical",
+            "port": {
+                "stirrer_1": "stirrer_head",
+                "main_reactor": "stirrer_port"
+            }
+        },
+        {
+            "id": "link_stirrer2_secondary_reactor",
+            "source": "stirrer_2",
+            "target": "secondary_reactor",
+            "type": "mechanical",
+            "port": {
+                "stirrer_2": "stirrer_head",
+                "secondary_reactor": "stirrer_port"
+            }
+        }
+    ]
+}

test/experiments/Protocol_Test_Station/centrifuge_protocol_test_station.json

@@ -0,0 +1,438 @@
+{
+    "nodes": [
+        {
+            "id": "CentrifugeProtocolTestStation",
+            "name": "离心协议测试站",
+            "children": [
+                "transfer_pump_1",
+                "transfer_pump_2",
+                "multiway_valve_1",
+                "multiway_valve_2",
+                "centrifuge_1",
+                "reaction_mixture",
+                "centrifuge_tube",
+                "collection_bottle_1",
+                "flask_water",
+                "flask_ethanol",
+                "flask_acetone",
+                "flask_air",
+                "waste_workup"
+            ],
+            "parent": null,
+            "type": "device",
+            "class": "workstation",
+            "position": {
+                "x": 500,
+                "y": 200,
+                "z": 0
+            },
+            "config": {
+                "protocol_type": [
+                    "CentrifugeProtocol",
+                    "PumpTransferProtocol"
+                ]
+            },
+            "data": {}
+        },
+        {
+            "id": "transfer_pump_1",
+            "name": "主转移泵",
+            "children": [],
+            "parent": "CentrifugeProtocolTestStation",
+            "type": "device",
+            "class": "virtual_transfer_pump",
+            "position": {
+                "x": 200,
+                "y": 300,
+                "z": 0
+            },
+            "config": {
+                "port": "VIRTUAL_PUMP1",
+                "max_volume": 25.0,
+                "transfer_rate": 2.0
+            },
+            "data": {
+                "position": 0.0,
+                "status": "Idle"
+            }
+        },
+        {
+            "id": "transfer_pump_2",
+            "name": "副转移泵",
+            "children": [],
+            "parent": "CentrifugeProtocolTestStation",
+            "type": "device",
+            "class": "virtual_transfer_pump",
+            "position": {
+                "x": 400,
+                "y": 300,
+                "z": 0
+            },
+            "config": {
+                "port": "VIRTUAL_PUMP2",
+                "max_volume": 25.0,
+                "transfer_rate": 2.0
+            },
+            "data": {
+                "position": 0.0,
+                "status": "Idle"
+            }
+        },
+        {
+            "id": "multiway_valve_1",
+            "name": "溶剂分配阀",
+            "children": [],
+            "parent": "CentrifugeProtocolTestStation",
+            "type": "device",
+            "class": "virtual_multiway_valve",
+            "position": {
+                "x": 200,
+                "y": 400,
+                "z": 0
+            },
+            "config": {
+                "port": "VIRTUAL_VALVE1",
+                "positions": 8
+            },
+            "data": {
+                "current_position": 1
+            }
+        },
+        {
+            "id": "multiway_valve_2",
+            "name": "样品分配阀",
+            "children": [],
+            "parent": "CentrifugeProtocolTestStation",
+            "type": "device",
+            "class": "virtual_multiway_valve",
+            "position": {
+                "x": 400,
+                "y": 400,
+                "z": 0
+            },
+            "config": {
+                "port": "VIRTUAL_VALVE2",
+                "positions": 8
+            },
+            "data": {
+                "current_position": 1
+            }
+        },
+        {
+            "id": "centrifuge_1",
+            "name": "离心机",
+            "children": [],
+            "parent": "CentrifugeProtocolTestStation",
+            "type": "device",
+            "class": "virtual_centrifuge",
+            "position": {
+                "x": 600,
+                "y": 350,
+                "z": 0
+            },
+            "config": {
+                "port": "VIRTUAL_CENTRIFUGE1",
+                "max_speed": 15000.0,
+                "max_temp": 40.0,
+                "min_temp": 4.0
+            },
+            "data": {
+                "status": "Idle"
+            }
+        },
+        {
+            "id": "reaction_mixture",
+            "name": "反应混合物",
+            "children": [],
+            "parent": "CentrifugeProtocolTestStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 100,
+                "y": 500,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 500.0
+            },
+            "data": {
+                "liquid": [
+                    {
+                        "liquid_type": "cell_suspension",
+                        "liquid_volume": 200.0
+                    }
+                ]
+            }
+        },
+        {
+            "id": "centrifuge_tube",
+            "name": "离心管",
+            "children": [],
+            "parent": "CentrifugeProtocolTestStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 600,
+                "y": 450,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 15.0
+            },
+            "data": {
+                "liquid": []
+            }
+        },
+        {
+            "id": "collection_bottle_1",
+            "name": "上清液收集瓶",
+            "children": [],
+            "parent": "CentrifugeProtocolTestStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 700,
+                "y": 500,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 500.0
+            },
+            "data": {
+                "liquid": []
+            }
+        },
+        {
+            "id": "flask_water",
+            "name": "蒸馏水瓶",
+            "children": [],
+            "parent": "CentrifugeProtocolTestStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 200,
+                "y": 600,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 1000.0
+            },
+            "data": {
+                "liquid": [
+                    {
+                        "liquid_type": "water",
+                        "liquid_volume": 900.0
+                    }
+                ]
+            }
+        },
+        {
+            "id": "flask_ethanol",
+            "name": "乙醇清洗瓶",
+            "children": [],
+            "parent": "CentrifugeProtocolTestStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 300,
+                "y": 600,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 1000.0
+            },
+            "data": {
+                "liquid": [
+                    {
+                        "liquid_type": "ethanol",
+                        "liquid_volume": 800.0
+                    }
+                ]
+            }
+        },
+        {
+            "id": "flask_acetone",
+            "name": "丙酮清洗瓶",
+            "children": [],
+            "parent": "CentrifugeProtocolTestStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 400,
+                "y": 600,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 1000.0
+            },
+            "data": {
+                "liquid": [
+                    {
+                        "liquid_type": "acetone",
+                        "liquid_volume": 800.0
+                    }
+                ]
+            }
+        },
+        {
+            "id": "flask_air",
+            "name": "空气瓶",
+            "children": [],
+            "parent": "CentrifugeProtocolTestStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 100,
+                "y": 600,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 1000.0
+            },
+            "data": {
+                "liquid": []
+            }
+        },
+        {
+            "id": "waste_workup",
+            "name": "废液瓶",
+            "children": [],
+            "parent": "CentrifugeProtocolTestStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 800,
+                "y": 550,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 2000.0
+            },
+            "data": {
+                "liquid": []
+            }
+        }
+    ],
+    "links": [
+        {
+            "id": "link_pump1_valve1",
+            "source": "transfer_pump_1",
+            "target": "multiway_valve_1",
+            "type": "fluid",
+            "port": {
+                "transfer_pump_1": "transferpump",
+                "multiway_valve_1": "transferpump"
+            }
+        },
+        {
+            "id": "link_pump2_valve2",
+            "source": "transfer_pump_2",
+            "target": "multiway_valve_2",
+            "type": "fluid",
+            "port": {
+                "transfer_pump_2": "transferpump",
+                "multiway_valve_2": "transferpump"
+            }
+        },
+        {
+            "id": "link_valve1_air",
+            "source": "multiway_valve_1",
+            "target": "flask_air",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_1": "1",
+                "flask_air": "top"
+            }
+        },
+        {
+            "id": "link_valve1_water",
+            "source": "multiway_valve_1",
+            "target": "flask_water",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_1": "2",
+                "flask_water": "outlet"
+            }
+        },
+        {
+            "id": "link_valve1_ethanol",
+            "source": "multiway_valve_1",
+            "target": "flask_ethanol",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_1": "3",
+                "flask_ethanol": "outlet"
+            }
+        },
+        {
+            "id": "link_valve1_acetone",
+            "source": "multiway_valve_1",
+            "target": "flask_acetone",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_1": "4",
+                "flask_acetone": "outlet"
+            }
+        },
+        {
+            "id": "link_valve1_valve2",
+            "source": "multiway_valve_1",
+            "target": "multiway_valve_2",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_1": "5",
+                "multiway_valve_2": "1"
+            }
+        },
+        {
+            "id": "link_valve2_reaction_mixture",
+            "source": "multiway_valve_2",
+            "target": "reaction_mixture",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_2": "2",
+                "reaction_mixture": "inlet"
+            }
+        },
+        {
+            "id": "link_valve2_centrifuge_tube",
+            "source": "multiway_valve_2",
+            "target": "centrifuge_tube",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_2": "3",
+                "centrifuge_tube": "inlet"
+            }
+        },
+        {
+            "id": "link_valve2_collection",
+            "source": "multiway_valve_2",
+            "target": "collection_bottle_1",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_2": "4",
+                "collection_bottle_1": "inlet"
+            }
+        },
+        {
+            "id": "link_valve2_waste",
+            "source": "multiway_valve_2",
+            "target": "waste_workup",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_2": "5",
+                "waste_workup": "inlet"
+            }
+        },
+        {
+            "id": "link_centrifuge1_centrifuge_tube",
+            "source": "centrifuge_1",
+            "target": "centrifuge_tube",
+            "type": "transport",
+            "port": {
+                "centrifuge_1": "centrifuge",
+                "centrifuge_tube": "centrifuge_port"
+            }
+        }
+    ]
+}

test/experiments/Protocol_Test_Station/clean_vessel_protocol_test_station.json

@@ -0,0 +1,426 @@
+{
+    "nodes": [
+        {
+            "id": "CleanVesselProtocolTestStation",
+            "name": "容器清洗协议测试站",
+            "children": [
+                "transfer_pump_1",
+                "transfer_pump_2",
+                "multiway_valve_1",
+                "multiway_valve_2",
+                "heatchill_1",
+                "flask_water",
+                "flask_acetone",
+                "flask_ethanol",
+                "flask_air",
+                "main_reactor",
+                "secondary_reactor",
+                "waste_workup"
+            ],
+            "parent": null,
+            "type": "device",
+            "class": "workstation",
+            "position": {
+                "x": 500,
+                "y": 200,
+                "z": 0
+            },
+            "config": {
+                "protocol_type": [
+                    "CleanVesselProtocol",
+                    "PumpTransferProtocol",
+                    "HeatChillProtocol",
+                    "HeatChillStartProtocol",
+                    "HeatChillStopProtocol"
+                ]
+            },
+            "data": {}
+        },
+        {
+            "id": "transfer_pump_1",
+            "name": "主清洗泵",
+            "children": [],
+            "parent": "CleanVesselProtocolTestStation",
+            "type": "device",
+            "class": "virtual_transfer_pump",
+            "position": {
+                "x": 250,
+                "y": 300,
+                "z": 0
+            },
+            "config": {
+                "port": "VIRTUAL_PUMP1",
+                "max_volume": 25.0,
+                "transfer_rate": 2.5
+            },
+            "data": {
+                "position": 0.0,
+                "status": "Idle"
+            }
+        },
+        {
+            "id": "transfer_pump_2",
+            "name": "副清洗泵",
+            "children": [],
+            "parent": "CleanVesselProtocolTestStation",
+            "type": "device",
+            "class": "virtual_transfer_pump",
+            "position": {
+                "x": 450,
+                "y": 300,
+                "z": 0
+            },
+            "config": {
+                "port": "VIRTUAL_PUMP2",
+                "max_volume": 25.0,
+                "transfer_rate": 2.5
+            },
+            "data": {
+                "position": 0.0,
+                "status": "Idle"
+            }
+        },
+        {
+            "id": "multiway_valve_1",
+            "name": "溶剂分配阀",
+            "children": [],
+            "parent": "CleanVesselProtocolTestStation",
+            "type": "device",
+            "class": "virtual_multiway_valve",
+            "position": {
+                "x": 250,
+                "y": 400,
+                "z": 0
+            },
+            "config": {
+                "port": "VIRTUAL_VALVE1",
+                "positions": 8
+            },
+            "data": {
+                "current_position": 1
+            }
+        },
+        {
+            "id": "multiway_valve_2",
+            "name": "容器分配阀",
+            "children": [],
+            "parent": "CleanVesselProtocolTestStation",
+            "type": "device",
+            "class": "virtual_multiway_valve",
+            "position": {
+                "x": 450,
+                "y": 400,
+                "z": 0
+            },
+            "config": {
+                "port": "VIRTUAL_VALVE2",
+                "positions": 8
+            },
+            "data": {
+                "current_position": 1
+            }
+        },
+        {
+            "id": "heatchill_1",
+            "name": "加热清洗器",
+            "children": [],
+            "parent": "CleanVesselProtocolTestStation",
+            "type": "device",
+            "class": "virtual_heatchill",
+            "position": {
+                "x": 600,
+                "y": 350,
+                "z": 0
+            },
+            "config": {
+                "port": "VIRTUAL_HEATCHILL1",
+                "max_temp": 100.0,
+                "min_temp": 10.0,
+                "max_stir_speed": 500.0
+            },
+            "data": {
+                "status": "Idle"
+            }
+        },
+        {
+            "id": "flask_water",
+            "name": "蒸馏水瓶",
+            "children": [],
+            "parent": "CleanVesselProtocolTestStation",
+            "type": "container",
+            "class": "container",
+            "position": {
+                "x": 50,
+                "y": 500,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 1000.0
+            },
+            "data": {
+                "liquid": [
+                    {
+                        "liquid_type": "water",
+                        "liquid_volume": 900.0
+                    }
+                ]
+            }
+        },
+        {
+            "id": "flask_acetone",
+            "name": "丙酮清洗瓶",
+            "children": [],
+            "parent": "CleanVesselProtocolTestStation",
+            "type": "container",
+            "class": "container",
+            "position": {
+                "x": 150,
+                "y": 500,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 1000.0
+            },
+            "data": {
+                "liquid": [
+                    {
+                        "liquid_type": "acetone",
+                        "liquid_volume": 800.0
+                    }
+                ]
+            }
+        },
+        {
+            "id": "flask_ethanol",
+            "name": "乙醇清洗瓶",
+            "children": [],
+            "parent": "CleanVesselProtocolTestStation",
+            "type": "container",
+            "class": "container",
+            "position": {
+                "x": 250,
+                "y": 500,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 1000.0
+            },
+            "data": {
+                "liquid": [
+                    {
+                        "liquid_type": "ethanol",
+                        "liquid_volume": 800.0
+                    }
+                ]
+            }
+        },
+        {
+            "id": "flask_air",
+            "name": "空气瓶",
+            "children": [],
+            "parent": "CleanVesselProtocolTestStation",
+            "type": "container",
+            "class": "container",
+            "position": {
+                "x": 350,
+                "y": 500,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 1000.0
+            },
+            "data": {
+                "liquid": []
+            }
+        },
+        {
+            "id": "main_reactor",
+            "name": "主反应器",
+            "children": [],
+            "parent": "CleanVesselProtocolTestStation",
+            "type": "container",
+            "class": "container",
+            "position": {
+                "x": 600,
+                "y": 450,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 2000.0
+            },
+            "data": {
+                "liquid": [
+                    {
+                        "liquid_type": "residue",
+                        "liquid_volume": 50.0
+                    }
+                ]
+            }
+        },
+        {
+            "id": "secondary_reactor",
+            "name": "副反应器",
+            "children": [],
+            "parent": "CleanVesselProtocolTestStation",
+            "type": "container",
+            "class": "container",
+            "position": {
+                "x": 800,
+                "y": 450,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 1000.0
+            },
+            "data": {
+                "liquid": [
+                    {
+                        "liquid_type": "organic_residue",
+                        "liquid_volume": 30.0
+                    }
+                ]
+            }
+        },
+        {
+            "id": "waste_workup",
+            "name": "清洗废液瓶",
+            "children": [],
+            "parent": "CleanVesselProtocolTestStation",
+            "type": "container",
+            "class": "container",
+            "position": {
+                "x": 700,
+                "y": 550,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 3000.0
+            },
+            "data": {
+                "liquid": []
+            }
+        }
+    ],
+    "links": [
+        {
+            "id": "link_pump1_valve1",
+            "source": "transfer_pump_1",
+            "target": "multiway_valve_1",
+            "type": "fluid",
+            "port": {
+                "transfer_pump_1": "transferpump",
+                "multiway_valve_1": "transferpump"
+            }
+        },
+        {
+            "id": "link_pump2_valve2",
+            "source": "transfer_pump_2",
+            "target": "multiway_valve_2",
+            "type": "fluid",
+            "port": {
+                "transfer_pump_2": "transferpump",
+                "multiway_valve_2": "transferpump"
+            }
+        },
+        {
+            "id": "link_valve1_air",
+            "source": "multiway_valve_1",
+            "target": "flask_air",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_1": "6",
+                "flask_air": "top"
+            }
+        },
+        {
+            "id": "link_valve1_water",
+            "source": "multiway_valve_1",
+            "target": "flask_water",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_1": "2",
+                "flask_water": "top"
+            }
+        },
+        {
+            "id": "link_valve1_acetone",
+            "source": "multiway_valve_1",
+            "target": "flask_acetone",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_1": "3",
+                "flask_acetone": "top"
+            }
+        },
+        {
+            "id": "link_valve1_ethanol",
+            "source": "multiway_valve_1",
+            "target": "flask_ethanol",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_1": "4",
+                "flask_ethanol": "top"
+            }
+        },
+        {
+            "id": "link_valve1_valve2",
+            "source": "multiway_valve_1",
+            "target": "multiway_valve_2",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_1": "5",
+                "multiway_valve_2": "1"
+            }
+        },
+        {
+            "id": "link_valve2_main_reactor",
+            "source": "multiway_valve_2",
+            "target": "main_reactor",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_2": "2",
+                "main_reactor": "top"
+            }
+        },
+        {
+            "id": "link_valve2_secondary_reactor",
+            "source": "multiway_valve_2",
+            "target": "secondary_reactor",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_2": "3",
+                "secondary_reactor": "top"
+            }
+        },
+        {
+            "id": "link_valve2_waste",
+            "source": "multiway_valve_2",
+            "target": "waste_workup",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_2": "4",
+                "waste_workup": "top"
+            }
+        },
+        {
+            "id": "link_valve2_air_return",
+            "source": "multiway_valve_2",
+            "target": "flask_air",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_2": "5",
+                "flask_air": "top"
+            }
+        },
+        {
+            "id": "link_heatchill1_main_reactor",
+            "source": "heatchill_1",
+            "target": "main_reactor",
+            "type": "mechanical",
+            "port": {
+                "heatchill_1": "heatchill",
+                "main_reactor": "bind"
+            }
+        }
+    ]
+}

test/experiments/Protocol_Test_Station/dual_valve_pump_test_station.json

@@ -0,0 +1,367 @@
+{
+    "nodes": [
+        {
+            "id": "DualValvePumpStation",
+            "name": "双阀门泵站",
+            "children": [
+                "transfer_pump_1",
+                "transfer_pump_2", 
+                "multiway_valve_1",
+                "multiway_valve_2",
+                "flask_DMF",
+                "flask_ethyl_acetate", 
+                "flask_methanol",
+                "flask_air",
+                "main_reactor",
+                "waste_workup",
+                "collection_bottle_1"
+            ],
+            "parent": null,
+            "type": "device",
+            "class": "workstation",
+            "position": {
+                "x": 500,
+                "y": 200,
+                "z": 0
+            },
+            "config": {
+                "protocol_type": ["PumpTransferProtocol"]
+            },
+            "data": {}
+        },
+        {
+            "id": "transfer_pump_1",
+            "name": "转移泵1",
+            "children": [],
+            "parent": "DualValvePumpStation",
+            "type": "device",
+            "class": "virtual_transfer_pump",
+            "position": {
+                "x": 300,
+                "y": 300,
+                "z": 0
+            },
+            "config": {
+                "port": "VIRTUAL_PUMP1",
+                "max_volume": 25.0,
+                "transfer_rate": 5.0
+            },
+            "data": {
+                "position": 0.0,
+                "status": "Idle"
+            }
+        },
+        {
+            "id": "transfer_pump_2",
+            "name": "转移泵2",
+            "children": [],
+            "parent": "DualValvePumpStation",
+            "type": "device",
+            "class": "virtual_transfer_pump",
+            "position": {
+                "x": 700,
+                "y": 300,
+                "z": 0
+            },
+            "config": {
+                "port": "VIRTUAL_PUMP2",
+                "max_volume": 25.0,
+                "transfer_rate": 5.0
+            },
+            "data": {
+                "position": 0.0,
+                "status": "Idle"
+            }
+        },
+        {
+            "id": "multiway_valve_1",
+            "name": "第一个八通阀",
+            "children": [],
+            "parent": "DualValvePumpStation",
+            "type": "device",
+            "class": "virtual_multiway_valve",
+            "position": {
+                "x": 300,
+                "y": 400,
+                "z": 0
+            },
+            "config": {
+                "port": "VIRTUAL_VALVE1",
+                "positions": 8
+            },
+            "data": {
+                "current_position": 1
+            }
+        },
+        {
+            "id": "multiway_valve_2",
+            "name": "第二个八通阀",
+            "children": [],
+            "parent": "DualValvePumpStation",
+            "type": "device",
+            "class": "virtual_multiway_valve",
+            "position": {
+                "x": 700,
+                "y": 400,
+                "z": 0
+            },
+            "config": {
+                "port": "VIRTUAL_VALVE2",
+                "positions": 8
+            },
+            "data": {
+                "current_position": 1
+            }
+        },
+        {
+            "id": "flask_DMF",
+            "name": "DMF试剂瓶",
+            "children": [],
+            "parent": "DualValvePumpStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 100,
+                "y": 500,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 1000.0
+            },
+            "data": {
+                "liquid": [
+                    {
+                        "liquid_type": "DMF",
+                        "liquid_volume": 800.0
+                    }
+                ]
+            }
+        },
+        {
+            "id": "flask_ethyl_acetate",
+            "name": "乙酸乙酯试剂瓶",
+            "children": [],
+            "parent": "DualValvePumpStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 200,
+                "y": 500,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 1000.0
+            },
+            "data": {
+                "liquid": [
+                    {
+                        "liquid_type": "ethyl_acetate",
+                        "liquid_volume": 800.0
+                    }
+                ]
+            }
+        },
+        {
+            "id": "flask_methanol",
+            "name": "甲醇试剂瓶",
+            "children": [],
+            "parent": "DualValvePumpStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 300,
+                "y": 500,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 1000.0
+            },
+            "data": {
+                "liquid": [
+                    {
+                        "liquid_type": "methanol",
+                        "liquid_volume": 800.0
+                    }
+                ]
+            }
+        },
+        {
+            "id": "flask_air",
+            "name": "空气瓶",
+            "children": [],
+            "parent": "DualValvePumpStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 400,
+                "y": 500,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 1000.0
+            },
+            "data": {
+                "liquid": []
+            }
+        },
+        {
+            "id": "main_reactor",
+            "name": "主反应器",
+            "children": [],
+            "parent": "DualValvePumpStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 600,
+                "y": 500,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 2000.0
+            },
+            "data": {
+                "liquid": []
+            }
+        },
+        {
+            "id": "waste_workup",
+            "name": "废液处理瓶",
+            "children": [],
+            "parent": "DualValvePumpStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 700,
+                "y": 500,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 2000.0
+            },
+            "data": {
+                "liquid": []
+            }
+        },
+        {
+            "id": "collection_bottle_1",
+            "name": "收集瓶1",
+            "children": [],
+            "parent": "DualValvePumpStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 800,
+                "y": 500,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 1000.0
+            },
+            "data": {
+                "liquid": []
+            }
+        }
+    ],
+    "links": [
+        {
+            "id": "link_pump1_valve1",
+            "source": "transfer_pump_1",
+            "target": "multiway_valve_1",
+            "type": "fluid",
+            "port": {
+                "transfer_pump_1": "transferpump",
+                "multiway_valve_1": "transferpump"
+            }
+        },
+        {
+            "id": "link_pump2_valve2",
+            "source": "transfer_pump_2",
+            "target": "multiway_valve_2",
+            "type": "fluid",
+            "port": {
+                "transfer_pump_2": "transferpump",
+                "multiway_valve_2": "transferpump"
+            }
+        },
+        {
+            "id": "link_valve1_valve2",
+            "source": "multiway_valve_1",
+            "target": "multiway_valve_2",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_1": "8",
+                "multiway_valve_2": "1"
+            }
+        },
+        {
+            "id": "link_valve1_air",
+            "source": "multiway_valve_1",
+            "target": "flask_air",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_1": "1",
+                "flask_air": "top"
+            }
+        },
+        {
+            "id": "link_valve1_DMF",
+            "source": "multiway_valve_1",
+            "target": "flask_DMF",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_1": "2",
+                "flask_DMF": "outlet"
+            }
+        },
+        {
+            "id": "link_valve1_ethyl_acetate",
+            "source": "multiway_valve_1",
+            "target": "flask_ethyl_acetate",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_1": "3",
+                "flask_ethyl_acetate": "outlet"
+            }
+        },
+        {
+            "id": "link_valve1_methanol",
+            "source": "multiway_valve_1",
+            "target": "flask_methanol",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_1": "4",
+                "flask_methanol": "outlet"
+            }
+        },
+        {
+            "id": "link_valve2_reactor",
+            "source": "multiway_valve_2",
+            "target": "main_reactor",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_2": "5",
+                "main_reactor": "inlet"
+            }
+        },
+        {
+            "id": "link_valve2_waste",
+            "source": "multiway_valve_2",
+            "target": "waste_workup",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_2": "6",
+                "waste_workup": "inlet"
+            }
+        },
+        {
+            "id": "link_valve2_collection",
+            "source": "multiway_valve_2",
+            "target": "collection_bottle_1",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_2": "7",
+                "collection_bottle_1": "inlet"
+            }
+        }
+    ]
+}

test/experiments/Protocol_Test_Station/evacuateandrefill_test_station.json

@@ -0,0 +1,557 @@
+{
+    "nodes": [
+        {
+            "id": "EvacuateRefillTestStation",
+            "name": "抽真空充气测试站",
+            "children": [
+                "transfer_pump_1",
+                "transfer_pump_2", 
+                "multiway_valve_1",
+                "multiway_valve_2",
+                "flask_DMF",
+                "flask_ethyl_acetate", 
+                "flask_methanol",
+                "flask_air",
+                "vacuum_pump_1",
+                "gas_source_nitrogen",
+                "gas_source_air",
+                "solenoid_valve_vacuum",
+                "solenoid_valve_gas",
+                "main_reactor",
+                "stirrer_1",
+                "waste_workup",
+                "collection_bottle_1"
+            ],
+            "parent": null,
+            "type": "device",
+            "class": "workstation",
+            "position": {
+                "x": 500,
+                "y": 200,
+                "z": 0
+            },
+            "config": {
+                "protocol_type": ["PumpTransferProtocol", "EvacuateAndRefillProtocol"]
+            },
+            "data": {}
+        },
+        {
+            "id": "transfer_pump_1",
+            "name": "转移泵1",
+            "children": [],
+            "parent": "EvacuateRefillTestStation",
+            "type": "device",
+            "class": "virtual_transfer_pump",
+            "position": {
+                "x": 300,
+                "y": 300,
+                "z": 0
+            },
+            "config": {
+                "port": "VIRTUAL_PUMP1",
+                "max_volume": 25.0,
+                "transfer_rate": 5.0
+            },
+            "data": {
+                "position": 0.0,
+                "status": "Idle"
+            }
+        },
+        {
+            "id": "transfer_pump_2",
+            "name": "转移泵2",
+            "children": [],
+            "parent": "EvacuateRefillTestStation",
+            "type": "device",
+            "class": "virtual_transfer_pump",
+            "position": {
+                "x": 700,
+                "y": 300,
+                "z": 0
+            },
+            "config": {
+                "port": "VIRTUAL_PUMP2",
+                "max_volume": 25.0,
+                "transfer_rate": 5.0
+            },
+            "data": {
+                "position": 0.0,
+                "status": "Idle"
+            }
+        },
+        {
+            "id": "multiway_valve_1",
+            "name": "第一个八通阀",
+            "children": [],
+            "parent": "EvacuateRefillTestStation",
+            "type": "device",
+            "class": "virtual_multiway_valve",
+            "position": {
+                "x": 300,
+                "y": 400,
+                "z": 0
+            },
+            "config": {
+                "port": "VIRTUAL_VALVE1",
+                "positions": 8
+            },
+            "data": {
+                "current_position": 1
+            }
+        },
+        {
+            "id": "multiway_valve_2",
+            "name": "第二个八通阀",
+            "children": [],
+            "parent": "EvacuateRefillTestStation",
+            "type": "device",
+            "class": "virtual_multiway_valve",
+            "position": {
+                "x": 700,
+                "y": 400,
+                "z": 0
+            },
+            "config": {
+                "port": "VIRTUAL_VALVE2",
+                "positions": 8
+            },
+            "data": {
+                "current_position": 1
+            }
+        },
+        {
+            "id": "vacuum_pump_1",
+            "name": "真空泵1",
+            "children": [],
+            "parent": "EvacuateRefillTestStation",
+            "type": "device",
+            "class": "virtual_vacuum_pump",
+            "position": {
+                "x": 150,
+                "y": 200,
+                "z": 0
+            },
+            "config": {
+                "port": "VIRTUAL_VACUUM1",
+                "max_pressure": -0.9
+            },
+            "data": {
+                "status": "OFF",
+                "pressure": 0.0
+            }
+        },
+        {
+            "id": "gas_source_nitrogen",
+            "name": "氮气源",
+            "children": [],
+            "parent": "EvacuateRefillTestStation",
+            "type": "device",
+            "class": "virtual_gas_source",
+            "position": {
+                "x": 850,
+                "y": 200,
+                "z": 0
+            },
+            "config": {
+                "port": "VIRTUAL_GAS_N2",
+                "gas_type": "nitrogen",
+                "max_pressure": 5.0
+            },
+            "data": {
+                "status": "OFF",
+                "flow_rate": 0.0
+            }
+        },
+        {
+            "id": "gas_source_air",
+            "name": "空气源",
+            "children": [],
+            "parent": "EvacuateRefillTestStation",
+            "type": "device",
+            "class": "virtual_gas_source",
+            "position": {
+                "x": 950,
+                "y": 200,
+                "z": 0
+            },
+            "config": {
+                "port": "VIRTUAL_GAS_AIR",
+                "gas_type": "air",
+                "max_pressure": 3.0
+            },
+            "data": {
+                "status": "OFF",
+                "flow_rate": 0.0
+            }
+        },
+        {
+            "id": "solenoid_valve_vacuum",
+            "name": "真空电磁阀",
+            "children": [],
+            "parent": "EvacuateRefillTestStation",
+            "type": "device",
+            "class": "virtual_solenoid_valve",
+            "position": {
+                "x": 225,
+                "y": 300,
+                "z": 0
+            },
+            "config": {
+                "port": "VIRTUAL_SOLENOID_VACUUM"
+            },
+            "data": {
+                "valve_position": "CLOSED"
+            }
+        },
+        {
+            "id": "solenoid_valve_gas",
+            "name": "气源电磁阀",
+            "children": [],
+            "parent": "EvacuateRefillTestStation",
+            "type": "device",
+            "class": "virtual_solenoid_valve",
+            "position": {
+                "x": 775,
+                "y": 300,
+                "z": 0
+            },
+            "config": {
+                "port": "VIRTUAL_SOLENOID_GAS"
+            },
+            "data": {
+                "valve_position": "CLOSED"
+            }
+        },
+        {
+            "id": "flask_DMF",
+            "name": "DMF试剂瓶",
+            "children": [],
+            "parent": "EvacuateRefillTestStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 100,
+                "y": 500,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 1000.0
+            },
+            "data": {
+                "liquid": [
+                    {
+                        "liquid_type": "DMF",
+                        "liquid_volume": 800.0
+                    }
+                ]
+            }
+        },
+        {
+            "id": "flask_ethyl_acetate",
+            "name": "乙酸乙酯试剂瓶",
+            "children": [],
+            "parent": "EvacuateRefillTestStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 200,
+                "y": 500,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 1000.0
+            },
+            "data": {
+                "liquid": [
+                    {
+                        "liquid_type": "ethyl_acetate",
+                        "liquid_volume": 800.0
+                    }
+                ]
+            }
+        },
+        {
+            "id": "flask_methanol",
+            "name": "甲醇试剂瓶",
+            "children": [],
+            "parent": "EvacuateRefillTestStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 300,
+                "y": 500,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 1000.0
+            },
+            "data": {
+                "liquid": [
+                    {
+                        "liquid_type": "methanol",
+                        "liquid_volume": 800.0
+                    }
+                ]
+            }
+        },
+        {
+            "id": "flask_air",
+            "name": "空气瓶",
+            "children": [],
+            "parent": "EvacuateRefillTestStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 400,
+                "y": 500,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 1000.0
+            },
+            "data": {
+                "liquid": []
+            }
+        },
+        {
+            "id": "main_reactor",
+            "name": "主反应器",
+            "children": [],
+            "parent": "EvacuateRefillTestStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 600,
+                "y": 500,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 2000.0
+            },
+            "data": {
+                "liquid": []
+            }
+        },
+        {
+            "id": "stirrer_1",
+            "name": "搅拌器1",
+            "children": [],
+            "parent": "EvacuateRefillTestStation",
+            "type": "device",
+            "class": "virtual_stirrer",
+            "position": {
+                "x": 600,
+                "y": 450,
+                "z": 0
+            },
+            "config": {
+                "port": "VIRTUAL_STIRRER1",
+                "max_speed": 1500.0
+            },
+            "data": {
+                "speed": 0.0,
+                "status": "OFF"
+            }
+        },
+        {
+            "id": "waste_workup",
+            "name": "废液处理瓶",
+            "children": [],
+            "parent": "EvacuateRefillTestStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 700,
+                "y": 500,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 2000.0
+            },
+            "data": {
+                "liquid": []
+            }
+        },
+        {
+            "id": "collection_bottle_1",
+            "name": "收集瓶1",
+            "children": [],
+            "parent": "EvacuateRefillTestStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 800,
+                "y": 500,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 1000.0
+            },
+            "data": {
+                "liquid": []
+            }
+        }
+    ],
+    "links": [
+        {
+            "id": "link_pump1_valve1",
+            "source": "transfer_pump_1",
+            "target": "multiway_valve_1",
+            "type": "fluid",
+            "port": {
+                "transfer_pump_1": "transferpump",
+                "multiway_valve_1": "transferpump"
+            }
+        },
+        {
+            "id": "link_pump2_valve2",
+            "source": "transfer_pump_2",
+            "target": "multiway_valve_2",
+            "type": "fluid",
+            "port": {
+                "transfer_pump_2": "transferpump",
+                "multiway_valve_2": "transferpump"
+            }
+        },
+        {
+            "id": "link_valve1_valve2",
+            "source": "multiway_valve_1",
+            "target": "multiway_valve_2",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_1": "8",
+                "multiway_valve_2": "1"
+            }
+        },
+        {
+            "id": "link_vacuum_solenoid",
+            "source": "vacuum_pump_1",
+            "target": "solenoid_valve_vacuum",
+            "type": "fluid",
+            "port": {
+                "vacuum_pump_1": "outlet",
+                "solenoid_valve_vacuum": "inlet"
+            }
+        },
+        {
+            "id": "link_solenoid_vacuum_valve1",
+            "source": "solenoid_valve_vacuum",
+            "target": "multiway_valve_1",
+            "type": "fluid",
+            "port": {
+                "solenoid_valve_vacuum": "outlet",
+                "multiway_valve_1": "7"
+            }
+        },
+        {
+            "id": "link_gas_solenoid",
+            "source": "gas_source_nitrogen",
+            "target": "solenoid_valve_gas",
+            "type": "fluid",
+            "port": {
+                "gas_source_nitrogen": "outlet",
+                "solenoid_valve_gas": "inlet"
+            }
+        },
+        {
+            "id": "link_solenoid_gas_valve2",
+            "source": "solenoid_valve_gas",
+            "target": "multiway_valve_2",
+            "type": "fluid",
+            "port": {
+                "solenoid_valve_gas": "outlet",
+                "multiway_valve_2": "8"
+            }
+        },
+        {
+            "id": "link_air_source_valve2",
+            "source": "gas_source_air",
+            "target": "multiway_valve_2",
+            "type": "fluid",
+            "port": {
+                "gas_source_air": "outlet",
+                "multiway_valve_2": "2"
+            }
+        },
+        {
+            "id": "link_valve1_air",
+            "source": "multiway_valve_1",
+            "target": "flask_air",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_1": "1",
+                "flask_air": "top"
+            }
+        },
+        {
+            "id": "link_valve1_DMF",
+            "source": "multiway_valve_1",
+            "target": "flask_DMF",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_1": "2",
+                "flask_DMF": "outlet"
+            }
+        },
+        {
+            "id": "link_valve1_ethyl_acetate",
+            "source": "multiway_valve_1",
+            "target": "flask_ethyl_acetate",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_1": "3",
+                "flask_ethyl_acetate": "outlet"
+            }
+        },
+        {
+            "id": "link_valve1_methanol",
+            "source": "multiway_valve_1",
+            "target": "flask_methanol",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_1": "4",
+                "flask_methanol": "outlet"
+            }
+        },
+        {
+            "id": "link_valve2_reactor",
+            "source": "multiway_valve_2",
+            "target": "main_reactor",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_2": "5",
+                "main_reactor": "inlet"
+            }
+        },
+        {
+            "id": "link_valve2_waste",
+            "source": "multiway_valve_2",
+            "target": "waste_workup",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_2": "6",
+                "waste_workup": "inlet"
+            }
+        },
+        {
+            "id": "link_valve2_collection",
+            "source": "multiway_valve_2",
+            "target": "collection_bottle_1",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_2": "7",
+                "collection_bottle_1": "inlet"
+            }
+        },
+        {
+            "id": "link_stirrer_reactor",
+            "source": "stirrer_1",
+            "target": "main_reactor",
+            "type": "mechanical",
+            "port": {
+                "stirrer_1": "stirrer",
+                "main_reactor": "stirrer"
+            }
+        }
+    ]
+}

test/experiments/Protocol_Test_Station/evaporate_protocol_test_station.json

@@ -0,0 +1,503 @@
+{
+    "nodes": [
+        {
+            "id": "EvaporateProtocolTestStation",
+            "name": "蒸发协议测试站",
+            "children": [
+                "transfer_pump_1",
+                "transfer_pump_2", 
+                "multiway_valve_1",
+                "multiway_valve_2",
+                "rotavap_1",
+                "heatchill_1",
+                "reaction_mixture",
+                "rotavap_flask",
+                "rotavap_condenser",
+                "flask_distillate",
+                "flask_ethanol",
+                "flask_acetone",
+                "flask_water",
+                "flask_air",
+                "waste_workup"
+            ],
+            "parent": null,
+            "type": "device",
+            "class": "workstation",
+            "position": {
+                "x": 500,
+                "y": 200,
+                "z": 0
+            },
+            "config": {
+                "protocol_type": [
+                    "EvaporateProtocol",
+                    "PumpTransferProtocol",
+                    "HeatChillProtocol",
+                    "HeatChillStartProtocol",
+                    "HeatChillStopProtocol"
+                ]
+            },
+            "data": {}
+        },
+        {
+            "id": "transfer_pump_1",
+            "name": "主转移泵",
+            "children": [],
+            "parent": "EvaporateProtocolTestStation",
+            "type": "device",
+            "class": "virtual_transfer_pump",
+            "position": {
+                "x": 200,
+                "y": 300,
+                "z": 0
+            },
+            "config": {
+                "port": "VIRTUAL_PUMP1",
+                "max_volume": 25.0,
+                "transfer_rate": 2.5
+            },
+            "data": {
+                "position": 0.0,
+                "status": "Idle"
+            }
+        },
+        {
+            "id": "transfer_pump_2",
+            "name": "副转移泵",
+            "children": [],
+            "parent": "EvaporateProtocolTestStation",
+            "type": "device",
+            "class": "virtual_transfer_pump",
+            "position": {
+                "x": 400,
+                "y": 300,
+                "z": 0
+            },
+            "config": {
+                "port": "VIRTUAL_PUMP2",
+                "max_volume": 25.0,
+                "transfer_rate": 2.5
+            },
+            "data": {
+                "position": 0.0,
+                "status": "Idle"
+            }
+        },
+        {
+            "id": "multiway_valve_1",
+            "name": "溶剂分配阀",
+            "children": [],
+            "parent": "EvaporateProtocolTestStation",
+            "type": "device",
+            "class": "virtual_multiway_valve",
+            "position": {
+                "x": 200,
+                "y": 400,
+                "z": 0
+            },
+            "config": {
+                "port": "VIRTUAL_VALVE1",
+                "positions": 8
+            },
+            "data": {
+                "current_position": 1
+            }
+        },
+        {
+            "id": "multiway_valve_2",
+            "name": "容器分配阀",
+            "children": [],
+            "parent": "EvaporateProtocolTestStation",
+            "type": "device",
+            "class": "virtual_multiway_valve",
+            "position": {
+                "x": 400,
+                "y": 400,
+                "z": 0
+            },
+            "config": {
+                "port": "VIRTUAL_VALVE2",
+                "positions": 8
+            },
+            "data": {
+                "current_position": 1
+            }
+        },
+        {
+            "id": "rotavap_1",
+            "name": "旋转蒸发仪",
+            "children": [],
+            "parent": "EvaporateProtocolTestStation",
+            "type": "device",
+            "class": "virtual_rotavap",
+            "position": {
+                "x": 700,
+                "y": 350,
+                "z": 0
+            },
+            "config": {
+                "port": "VIRTUAL_ROTAVAP1",
+                "max_temp": 180.0,
+                "max_rotation_speed": 280.0
+            },
+            "data": {
+                "status": "Ready"
+            }
+        },
+        {
+            "id": "heatchill_1",
+            "name": "预加热器",
+            "children": [],
+            "parent": "EvaporateProtocolTestStation",
+            "type": "device",
+            "class": "virtual_heatchill",
+            "position": {
+                "x": 100,
+                "y": 550,
+                "z": 0
+            },
+            "config": {
+                "port": "VIRTUAL_HEATCHILL1",
+                "max_temp": 100.0,
+                "min_temp": 10.0,
+                "max_stir_speed": 500.0
+            },
+            "data": {
+                "status": "Idle"
+            }
+        },
+        {
+            "id": "reaction_mixture",
+            "name": "反应混合物",
+            "children": [],
+            "parent": "EvaporateProtocolTestStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 100,
+                "y": 450,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 1000.0
+            },
+            "data": {
+                "liquid": [
+                    {
+                        "liquid_type": "reaction_mixture",
+                        "liquid_volume": 600.0
+                    }
+                ]
+            }
+        },
+        {
+            "id": "rotavap_flask",
+            "name": "旋蒸样品瓶",
+            "children": [],
+            "parent": "EvaporateProtocolTestStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 700,
+                "y": 450,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 500.0
+            },
+            "data": {
+                "liquid": []
+            }
+        },
+        {
+            "id": "rotavap_condenser",
+            "name": "旋蒸冷凝器",
+            "children": [],
+            "parent": "EvaporateProtocolTestStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 800,
+                "y": 350,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 500.0
+            },
+            "data": {
+                "liquid": []
+            }
+        },
+        {
+            "id": "flask_distillate",
+            "name": "溶剂回收瓶",
+            "children": [],
+            "parent": "EvaporateProtocolTestStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 800,
+                "y": 450,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 1000.0
+            },
+            "data": {
+                "liquid": []
+            }
+        },
+        {
+            "id": "flask_ethanol",
+            "name": "乙醇清洗瓶",
+            "children": [],
+            "parent": "EvaporateProtocolTestStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 50,
+                "y": 600,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 1000.0
+            },
+            "data": {
+                "liquid": [
+                    {
+                        "liquid_type": "ethanol",
+                        "liquid_volume": 800.0
+                    }
+                ]
+            }
+        },
+        {
+            "id": "flask_acetone",
+            "name": "丙酮清洗瓶",
+            "children": [],
+            "parent": "EvaporateProtocolTestStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 150,
+                "y": 600,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 1000.0
+            },
+            "data": {
+                "liquid": [
+                    {
+                        "liquid_type": "acetone",
+                        "liquid_volume": 800.0
+                    }
+                ]
+            }
+        },
+        {
+            "id": "flask_water",
+            "name": "蒸馏水瓶",
+            "children": [],
+            "parent": "EvaporateProtocolTestStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 250,
+                "y": 600,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 1000.0
+            },
+            "data": {
+                "liquid": [
+                    {
+                        "liquid_type": "water",
+                        "liquid_volume": 900.0
+                    }
+                ]
+            }
+        },
+        {
+            "id": "flask_air",
+            "name": "空气瓶",
+            "children": [],
+            "parent": "EvaporateProtocolTestStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 350,
+                "y": 600,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 1000.0
+            },
+            "data": {
+                "liquid": []
+            }
+        },
+        {
+            "id": "waste_workup",
+            "name": "废液瓶",
+            "children": [],
+            "parent": "EvaporateProtocolTestStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 600,
+                "y": 550,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 3000.0
+            },
+            "data": {
+                "liquid": []
+            }
+        }
+    ],
+    "links": [
+        {
+            "id": "link_pump1_valve1",
+            "source": "transfer_pump_1",
+            "target": "multiway_valve_1",
+            "type": "fluid",
+            "port": {
+                "transfer_pump_1": "transferpump",
+                "multiway_valve_1": "transferpump"
+            }
+        },
+        {
+            "id": "link_pump2_valve2",
+            "source": "transfer_pump_2",
+            "target": "multiway_valve_2",
+            "type": "fluid",
+            "port": {
+                "transfer_pump_2": "transferpump",
+                "multiway_valve_2": "transferpump"
+            }
+        },
+        {
+            "id": "link_valve1_air",
+            "source": "multiway_valve_1",
+            "target": "flask_air",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_1": "1",
+                "flask_air": "top"
+            }
+        },
+        {
+            "id": "link_valve1_ethanol",
+            "source": "multiway_valve_1",
+            "target": "flask_ethanol",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_1": "2",
+                "flask_ethanol": "outlet"
+            }
+        },
+        {
+            "id": "link_valve1_acetone",
+            "source": "multiway_valve_1",
+            "target": "flask_acetone",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_1": "3",
+                "flask_acetone": "outlet"
+            }
+        },
+        {
+            "id": "link_valve1_water",
+            "source": "multiway_valve_1",
+            "target": "flask_water",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_1": "4",
+                "flask_water": "outlet"
+            }
+        },
+        {
+            "id": "link_valve1_valve2",
+            "source": "multiway_valve_1",
+            "target": "multiway_valve_2",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_1": "5",
+                "multiway_valve_2": "1"
+            }
+        },
+        {
+            "id": "link_valve2_reaction_mixture",
+            "source": "multiway_valve_2",
+            "target": "reaction_mixture",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_2": "2",
+                "reaction_mixture": "inlet"
+            }
+        },
+        {
+            "id": "link_valve2_rotavap_flask",
+            "source": "multiway_valve_2",
+            "target": "rotavap_flask",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_2": "3",
+                "rotavap_flask": "inlet"
+            }
+        },
+        {
+            "id": "link_valve2_rotavap_condenser",
+            "source": "multiway_valve_2",
+            "target": "rotavap_condenser",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_2": "4",
+                "rotavap_condenser": "inlet"
+            }
+        },
+        {
+            "id": "link_valve2_distillate",
+            "source": "multiway_valve_2",
+            "target": "flask_distillate",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_2": "5",
+                "flask_distillate": "inlet"
+            }
+        },
+        {
+            "id": "link_valve2_waste",
+            "source": "multiway_valve_2",
+            "target": "waste_workup",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_2": "6",
+                "waste_workup": "inlet"
+            }
+        },
+        {
+            "id": "link_rotavap1_rotavap_flask",
+            "source": "rotavap_1",
+            "target": "rotavap_flask",
+            "type": "fluid",
+            "port": {
+                "rotavap_1": "rotavap-sample",
+                "rotavap_flask": "rotavap_port"
+            }
+        },
+        {
+            "id": "link_heatchill1_reaction_mixture",
+            "source": "heatchill_1",
+            "target": "reaction_mixture",
+            "type": "mechanical",
+            "port": {
+                "heatchill_1": "heatchill",
+                "reaction_mixture": "heating_jacket"
+            }
+        }
+    ]
+}

test/experiments/Protocol_Test_Station/filter_protocol_test_station.json

@@ -0,0 +1,534 @@
+{
+    "nodes": [
+        {
+            "id": "FilterProtocolTestStation",
+            "name": "过滤协议测试站",
+            "children": [
+                "transfer_pump_1",
+                "transfer_pump_2",
+                "multiway_valve_1",
+                "multiway_valve_2",
+                "filter_1",
+                "heatchill_1",
+                "reaction_mixture",
+                "filter_vessel",
+                "filtrate_vessel",
+                "collection_bottle_1",
+                "collection_bottle_2",
+                "flask_water",
+                "flask_ethanol",
+                "flask_acetone",
+                "flask_air",
+                "waste_workup"
+            ],
+            "parent": null,
+            "type": "device",
+            "class": "workstation",
+            "position": {
+                "x": 500,
+                "y": 200,
+                "z": 0
+            },
+            "config": {
+                "protocol_type": [
+                    "FilterProtocol",
+                    "PumpTransferProtocol",
+                    "HeatChillProtocol",
+                    "HeatChillStartProtocol",
+                    "HeatChillStopProtocol"
+                ]
+            },
+            "data": {}
+        },
+        {
+            "id": "transfer_pump_1",
+            "name": "主转移泵",
+            "children": [],
+            "parent": "FilterProtocolTestStation",
+            "type": "device",
+            "class": "virtual_transfer_pump",
+            "position": {
+                "x": 200,
+                "y": 300,
+                "z": 0
+            },
+            "config": {
+                "port": "VIRTUAL_PUMP1",
+                "max_volume": 25.0,
+                "transfer_rate": 2.0
+            },
+            "data": {
+                "position": 0.0,
+                "status": "Idle"
+            }
+        },
+        {
+            "id": "transfer_pump_2",
+            "name": "副转移泵",
+            "children": [],
+            "parent": "FilterProtocolTestStation",
+            "type": "device",
+            "class": "virtual_transfer_pump",
+            "position": {
+                "x": 400,
+                "y": 300,
+                "z": 0
+            },
+            "config": {
+                "port": "VIRTUAL_PUMP2",
+                "max_volume": 25.0,
+                "transfer_rate": 2.0
+            },
+            "data": {
+                "position": 0.0,
+                "status": "Idle"
+            }
+        },
+        {
+            "id": "multiway_valve_1",
+            "name": "溶剂分配阀",
+            "children": [],
+            "parent": "FilterProtocolTestStation",
+            "type": "device",
+            "class": "virtual_multiway_valve",
+            "position": {
+                "x": 200,
+                "y": 400,
+                "z": 0
+            },
+            "config": {
+                "port": "VIRTUAL_VALVE1",
+                "positions": 8
+            },
+            "data": {
+                "current_position": 1
+            }
+        },
+        {
+            "id": "multiway_valve_2",
+            "name": "样品分配阀",
+            "children": [],
+            "parent": "FilterProtocolTestStation",
+            "type": "device",
+            "class": "virtual_multiway_valve",
+            "position": {
+                "x": 400,
+                "y": 400,
+                "z": 0
+            },
+            "config": {
+                "port": "VIRTUAL_VALVE2",
+                "positions": 8
+            },
+            "data": {
+                "current_position": 1
+            }
+        },
+        {
+            "id": "filter_1",
+            "name": "过滤器",
+            "children": [],
+            "parent": "FilterProtocolTestStation",
+            "type": "device",
+            "class": "virtual_filter",
+            "position": {
+                "x": 600,
+                "y": 350,
+                "z": 0
+            },
+            "config": {
+                "port": "VIRTUAL_FILTER1",
+                "max_temp": 100.0,
+                "max_stir_speed": 1000.0,
+                "max_volume": 500.0
+            },
+            "data": {
+                "status": "Idle"
+            }
+        },
+        {
+            "id": "heatchill_1",
+            "name": "加热搅拌器",
+            "children": [],
+            "parent": "FilterProtocolTestStation",
+            "type": "device",
+            "class": "virtual_heatchill",
+            "position": {
+                "x": 600,
+                "y": 450,
+                "z": 0
+            },
+            "config": {
+                "port": "VIRTUAL_HEATCHILL1",
+                "max_temp": 100.0,
+                "min_temp": 4.0,
+                "max_stir_speed": 1000.0
+            },
+            "data": {
+                "status": "Idle"
+            }
+        },
+        {
+            "id": "reaction_mixture",
+            "name": "反应混合物",
+            "children": [],
+            "parent": "FilterProtocolTestStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 100,
+                "y": 500,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 1000.0
+            },
+            "data": {
+                "liquid": [
+                    {
+                        "liquid_type": "cell_suspension",
+                        "liquid_volume": 200.0
+                    }
+                ]
+            }
+        },
+        {
+            "id": "filter_vessel",
+            "name": "过滤器容器",
+            "children": [],
+            "parent": "FilterProtocolTestStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 600,
+                "y": 550,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 500.0
+            },
+            "data": {
+                "liquid": []
+            }
+        },
+        {
+            "id": "filtrate_vessel",
+            "name": "滤液收集容器",
+            "children": [],
+            "parent": "FilterProtocolTestStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 700,
+                "y": 500,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 500.0
+            },
+            "data": {
+                "liquid": []
+            }
+        },
+        {
+            "id": "collection_bottle_1",
+            "name": "收集瓶1",
+            "children": [],
+            "parent": "FilterProtocolTestStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 800,
+                "y": 500,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 1000.0
+            },
+            "data": {
+                "liquid": []
+            }
+        },
+        {
+            "id": "collection_bottle_2",
+            "name": "收集瓶2",
+            "children": [],
+            "parent": "FilterProtocolTestStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 900,
+                "y": 500,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 1000.0
+            },
+            "data": {
+                "liquid": []
+            }
+        },
+        {
+            "id": "flask_water",
+            "name": "蒸馏水瓶",
+            "children": [],
+            "parent": "FilterProtocolTestStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 200,
+                "y": 600,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 1000.0
+            },
+            "data": {
+                "liquid": [
+                    {
+                        "liquid_type": "water",
+                        "liquid_volume": 900.0
+                    }
+                ]
+            }
+        },
+        {
+            "id": "flask_ethanol",
+            "name": "乙醇清洗瓶",
+            "children": [],
+            "parent": "FilterProtocolTestStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 300,
+                "y": 600,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 1000.0
+            },
+            "data": {
+                "liquid": [
+                    {
+                        "liquid_type": "ethanol",
+                        "liquid_volume": 800.0
+                    }
+                ]
+            }
+        },
+        {
+            "id": "flask_acetone",
+            "name": "丙酮清洗瓶",
+            "children": [],
+            "parent": "FilterProtocolTestStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 400,
+                "y": 600,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 1000.0
+            },
+            "data": {
+                "liquid": [
+                    {
+                        "liquid_type": "acetone",
+                        "liquid_volume": 800.0
+                    }
+                ]
+            }
+        },
+        {
+            "id": "flask_air",
+            "name": "空气瓶",
+            "children": [],
+            "parent": "FilterProtocolTestStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 100,
+                "y": 600,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 1000.0
+            },
+            "data": {
+                "liquid": []
+            }
+        },
+        {
+            "id": "waste_workup",
+            "name": "废液瓶",
+            "children": [],
+            "parent": "FilterProtocolTestStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 800,
+                "y": 600,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 2000.0
+            },
+            "data": {
+                "liquid": []
+            }
+        }
+    ],
+    "links": [
+        {
+            "id": "link_pump1_valve1",
+            "source": "transfer_pump_1",
+            "target": "multiway_valve_1",
+            "type": "fluid",
+            "port": {
+                "transfer_pump_1": "transferpump",
+                "multiway_valve_1": "transferpump"
+            }
+        },
+        {
+            "id": "link_pump2_valve2",
+            "source": "transfer_pump_2",
+            "target": "multiway_valve_2",
+            "type": "fluid",
+            "port": {
+                "transfer_pump_2": "transferpump",
+                "multiway_valve_2": "transferpump"
+            }
+        },
+        {
+            "id": "link_valve1_air",
+            "source": "multiway_valve_1",
+            "target": "flask_air",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_1": "1",
+                "flask_air": "top"
+            }
+        },
+        {
+            "id": "link_valve1_water",
+            "source": "multiway_valve_1",
+            "target": "flask_water",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_1": "2",
+                "flask_water": "outlet"
+            }
+        },
+        {
+            "id": "link_valve1_ethanol",
+            "source": "multiway_valve_1",
+            "target": "flask_ethanol",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_1": "3",
+                "flask_ethanol": "outlet"
+            }
+        },
+        {
+            "id": "link_valve1_acetone",
+            "source": "multiway_valve_1",
+            "target": "flask_acetone",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_1": "4",
+                "flask_acetone": "outlet"
+            }
+        },
+        {
+            "id": "link_valve1_valve2",
+            "source": "multiway_valve_1",
+            "target": "multiway_valve_2",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_1": "5",
+                "multiway_valve_2": "1"
+            }
+        },
+        {
+            "id": "link_valve2_reaction_mixture",
+            "source": "multiway_valve_2",
+            "target": "reaction_mixture",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_2": "2",
+                "reaction_mixture": "inlet"
+            }
+        },
+        {
+            "id": "link_valve2_filter_vessel",
+            "source": "multiway_valve_2",
+            "target": "filter_vessel",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_2": "3",
+                "filter_vessel": "inlet"
+            }
+        },
+        {
+            "id": "link_valve2_filtrate_vessel",
+            "source": "multiway_valve_2",
+            "target": "filtrate_vessel",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_2": "4",
+                "filtrate_vessel": "inlet"
+            }
+        },
+        {
+            "id": "link_valve2_collection1",
+            "source": "multiway_valve_2",
+            "target": "collection_bottle_1",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_2": "5",
+                "collection_bottle_1": "inlet"
+            }
+        },
+        {
+            "id": "link_valve2_collection2",
+            "source": "multiway_valve_2",
+            "target": "collection_bottle_2",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_2": "6",
+                "collection_bottle_2": "inlet"
+            }
+        },
+        {
+            "id": "link_valve2_waste",
+            "source": "multiway_valve_2",
+            "target": "waste_workup",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_2": "7",
+                "waste_workup": "inlet"
+            }
+        },
+        {
+            "id": "link_filter1_filter_vessel",
+            "source": "filter_1",
+            "target": "filter_vessel",
+            "type": "transport",
+            "port": {
+                "filter_1": "filter",
+                "filter_vessel": "filter_port"
+            }
+        },
+        {
+            "id": "link_heatchill1_filter_vessel",
+            "source": "heatchill_1",
+            "target": "filter_vessel",
+            "type": "mechanical",
+            "port": {
+                "heatchill_1": "heatchill",
+                "filter_vessel": "heating_jacket"
+            }
+        }
+    ]
+}

test/experiments/Protocol_Test_Station/heatchill_protocol_test_station.json

@@ -0,0 +1,671 @@
+{
+    "nodes": [
+        {
+            "id": "HeatChillProtocolTestStation",
+            "name": "加热冷却协议测试站",
+            "children": [
+                "transfer_pump_1",
+                "transfer_pump_2", 
+                "multiway_valve_1",
+                "multiway_valve_2",
+                "stirrer_1",
+                "stirrer_2",
+                "heatchill_1",
+                "heatchill_2",
+                "flask_DMF",
+                "flask_ethyl_acetate", 
+                "flask_methanol",
+                "flask_acetone",
+                "flask_water",
+                "flask_ethanol",
+                "flask_air",
+                "main_reactor",
+                "secondary_reactor",
+                "waste_workup",
+                "collection_bottle_1",
+                "collection_bottle_2"
+            ],
+            "parent": null,
+            "type": "device",
+            "class": "workstation",
+            "position": {
+                "x": 500,
+                "y": 200,
+                "z": 0
+            },
+            "config": {
+                "protocol_type": [
+                    "PumpTransferProtocol", 
+                    "AddProtocol", 
+                    "HeatChillProtocol", 
+                    "HeatChillStartProtocol", 
+                    "HeatChillStopProtocol",
+                    "DissolveProtocol"
+                ]
+            },
+            "data": {}
+        },
+        {
+            "id": "transfer_pump_1",
+            "name": "转移泵1",
+            "children": [],
+            "parent": "HeatChillProtocolTestStation",
+            "type": "device",
+            "class": "virtual_transfer_pump",
+            "position": {
+                "x": 250,
+                "y": 300,
+                "z": 0
+            },
+            "config": {
+                "port": "VIRTUAL_PUMP1",
+                "max_volume": 25.0,
+                "transfer_rate": 5.0
+            },
+            "data": {
+                "position": 0.0,
+                "status": "Idle"
+            }
+        },
+        {
+            "id": "transfer_pump_2",
+            "name": "转移泵2",
+            "children": [],
+            "parent": "HeatChillProtocolTestStation",
+            "type": "device",
+            "class": "virtual_transfer_pump",
+            "position": {
+                "x": 750,
+                "y": 300,
+                "z": 0
+            },
+            "config": {
+                "port": "VIRTUAL_PUMP2",
+                "max_volume": 25.0,
+                "transfer_rate": 5.0
+            },
+            "data": {
+                "position": 0.0,
+                "status": "Idle"
+            }
+        },
+        {
+            "id": "multiway_valve_1",
+            "name": "试剂分配阀",
+            "children": [],
+            "parent": "HeatChillProtocolTestStation",
+            "type": "device",
+            "class": "virtual_multiway_valve",
+            "position": {
+                "x": 250,
+                "y": 400,
+                "z": 0
+            },
+            "config": {
+                "port": "VIRTUAL_VALVE1",
+                "positions": 8
+            },
+            "data": {
+                "current_position": 1
+            }
+        },
+        {
+            "id": "multiway_valve_2",
+            "name": "反应器分配阀",
+            "children": [],
+            "parent": "HeatChillProtocolTestStation",
+            "type": "device",
+            "class": "virtual_multiway_valve",
+            "position": {
+                "x": 750,
+                "y": 400,
+                "z": 0
+            },
+            "config": {
+                "port": "VIRTUAL_VALVE2",
+                "positions": 8
+            },
+            "data": {
+                "current_position": 1
+            }
+        },
+        {
+            "id": "stirrer_1",
+            "name": "主反应器搅拌器",
+            "children": [],
+            "parent": "HeatChillProtocolTestStation",
+            "type": "device",
+            "class": "virtual_stirrer",
+            "position": {
+                "x": 600,
+                "y": 450,
+                "z": 0
+            },
+            "config": {
+                "port": "VIRTUAL_STIRRER1",
+                "max_speed": 1500.0,
+                "default_speed": 300.0
+            },
+            "data": {
+                "speed": 0.0,
+                "status": "Stopped"
+            }
+        },
+        {
+            "id": "stirrer_2",
+            "name": "副反应器搅拌器",
+            "children": [],
+            "parent": "HeatChillProtocolTestStation",
+            "type": "device",
+            "class": "virtual_stirrer",
+            "position": {
+                "x": 900,
+                "y": 450,
+                "z": 0
+            },
+            "config": {
+                "port": "VIRTUAL_STIRRER2",
+                "max_speed": 1500.0,
+                "default_speed": 300.0
+            },
+            "data": {
+                "speed": 0.0,
+                "status": "Stopped"
+            }
+        },
+        {
+            "id": "heatchill_1",
+            "name": "主反应器加热冷却器",
+            "children": [],
+            "parent": "HeatChillProtocolTestStation",
+            "type": "device",
+            "class": "virtual_heatchill",
+            "position": {
+                "x": 550,
+                "y": 400,
+                "z": 0
+            },
+            "config": {
+                "port": "VIRTUAL_HEATCHILL1",
+                "max_temp": 200.0,
+                "min_temp": -80.0,
+                "max_stir_speed": 1000.0
+            },
+            "data": {
+                "status": "Idle"
+            }
+        },
+        {
+            "id": "heatchill_2",
+            "name": "副反应器加热冷却器",
+            "children": [],
+            "parent": "HeatChillProtocolTestStation",
+            "type": "device",
+            "class": "virtual_heatchill",
+            "position": {
+                "x": 850,
+                "y": 400,
+                "z": 0
+            },
+            "config": {
+                "port": "VIRTUAL_HEATCHILL2",
+                "max_temp": 200.0,
+                "min_temp": -80.0,
+                "max_stir_speed": 1000.0
+            },
+            "data": {
+                "status": "Idle"
+            }
+        },
+        {
+            "id": "flask_DMF",
+            "name": "DMF试剂瓶",
+            "children": [],
+            "parent": "HeatChillProtocolTestStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 50,
+                "y": 550,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 1000.0
+            },
+            "data": {
+                "liquid": [
+                    {
+                        "liquid_type": "DMF",
+                        "liquid_volume": 800.0
+                    }
+                ]
+            }
+        },
+        {
+            "id": "flask_ethyl_acetate",
+            "name": "乙酸乙酯试剂瓶",
+            "children": [],
+            "parent": "HeatChillProtocolTestStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 150,
+                "y": 550,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 1000.0
+            },
+            "data": {
+                "liquid": [
+                    {
+                        "liquid_type": "ethyl_acetate",
+                        "liquid_volume": 800.0
+                    }
+                ]
+            }
+        },
+        {
+            "id": "flask_methanol",
+            "name": "甲醇试剂瓶",
+            "children": [],
+            "parent": "HeatChillProtocolTestStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 250,
+                "y": 550,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 1000.0
+            },
+            "data": {
+                "liquid": [
+                    {
+                        "liquid_type": "methanol",
+                        "liquid_volume": 800.0
+                    }
+                ]
+            }
+        },
+                {
+            "id": "flask_ethanol",
+            "name": "乙醇试剂瓶",
+            "children": [],
+            "parent": "HeatChillProtocolTestStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 650,
+                "y": 550,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 1000.0
+            },
+            "data": {
+                "liquid": [
+                    {
+                        "liquid_type": "ethanol",
+                        "liquid_volume": 800.0
+                    }
+                ]
+            }
+        },
+        {
+            "id": "flask_acetone",
+            "name": "丙酮试剂瓶",
+            "children": [],
+            "parent": "HeatChillProtocolTestStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 350,
+                "y": 550,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 1000.0
+            },
+            "data": {
+                "liquid": [
+                    {
+                        "liquid_type": "acetone",
+                        "liquid_volume": 800.0
+                    }
+                ]
+            }
+        },
+        {
+            "id": "flask_water",
+            "name": "蒸馏水瓶",
+            "children": [],
+            "parent": "HeatChillProtocolTestStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 450,
+                "y": 550,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 1000.0
+            },
+            "data": {
+                "liquid": [
+                    {
+                        "liquid_type": "water",
+                        "liquid_volume": 800.0
+                    }
+                ]
+            }
+        },
+        {
+            "id": "flask_air",
+            "name": "空气瓶",
+            "children": [],
+            "parent": "HeatChillProtocolTestStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 550,
+                "y": 550,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 1000.0
+            },
+            "data": {
+                "liquid": []
+            }
+        },
+        {
+            "id": "main_reactor",
+            "name": "主反应器",
+            "children": [],
+            "parent": "HeatChillProtocolTestStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 600,
+                "y": 500,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 2000.0
+            },
+            "data": {
+                "liquid": []
+            }
+        },
+        {
+            "id": "secondary_reactor",
+            "name": "副反应器",
+            "children": [],
+            "parent": "HeatChillProtocolTestStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 900,
+                "y": 500,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 1000.0
+            },
+            "data": {
+                "liquid": []
+            }
+        },
+        {
+            "id": "waste_workup",
+            "name": "废液处理瓶",
+            "children": [],
+            "parent": "HeatChillProtocolTestStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 700,
+                "y": 600,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 2000.0
+            },
+            "data": {
+                "liquid": []
+            }
+        },
+        {
+            "id": "collection_bottle_1",
+            "name": "收集瓶1",
+            "children": [],
+            "parent": "HeatChillProtocolTestStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 800,
+                "y": 600,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 1000.0
+            },
+            "data": {
+                "liquid": []
+            }
+        },
+        {
+            "id": "collection_bottle_2",
+            "name": "收集瓶2",
+            "children": [],
+            "parent": "HeatChillProtocolTestStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 900,
+                "y": 600,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 1000.0
+            },
+            "data": {
+                "liquid": []
+            }
+        }
+    ],
+    "links": [
+        {
+            "id": "link_pump1_valve1",
+            "source": "transfer_pump_1",
+            "target": "multiway_valve_1",
+            "type": "fluid",
+            "port": {
+                "transfer_pump_1": "transferpump",
+                "multiway_valve_1": "transferpump"
+            }
+        },
+        {
+            "id": "link_pump2_valve2",
+            "source": "transfer_pump_2",
+            "target": "multiway_valve_2",
+            "type": "fluid",
+            "port": {
+                "transfer_pump_2": "transferpump",
+                "multiway_valve_2": "transferpump"
+            }
+        },
+        {
+            "id": "link_valve1_valve2",
+            "source": "multiway_valve_1",
+            "target": "multiway_valve_2",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_1": "8",
+                "multiway_valve_2": "1"
+            }
+        },
+        {
+            "id": "link_valve1_DMF",
+            "source": "multiway_valve_1",
+            "target": "flask_DMF",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_1": "1",
+                "flask_DMF": "outlet"
+            }
+        },
+        {
+            "id": "link_valve1_ethyl_acetate",
+            "source": "multiway_valve_1",
+            "target": "flask_ethyl_acetate",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_1": "2",
+                "flask_ethyl_acetate": "outlet"
+            }
+        },
+        {
+            "id": "link_valve1_methanol",
+            "source": "multiway_valve_1",
+            "target": "flask_methanol",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_1": "3",
+                "flask_methanol": "outlet"
+            }
+        },
+        {
+            "id": "link_valve1_acetone",
+            "source": "multiway_valve_1",
+            "target": "flask_acetone",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_1": "4",
+                "flask_acetone": "outlet"
+            }
+        },
+        {
+            "id": "link_valve1_water",
+            "source": "multiway_valve_1",
+            "target": "flask_water",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_1": "5",
+                "flask_water": "outlet"
+            }
+        },
+        {
+            "id": "link_valve1_air",
+            "source": "multiway_valve_1",
+            "target": "flask_air",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_1": "6",
+                "flask_air": "top"
+            }
+        },
+        {
+            "id": "link_valve2_main_reactor",
+            "source": "multiway_valve_2",
+            "target": "main_reactor",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_2": "2",
+                "main_reactor": "inlet"
+            }
+        },
+        {
+            "id": "link_valve2_secondary_reactor",
+            "source": "multiway_valve_2",
+            "target": "secondary_reactor",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_2": "3",
+                "secondary_reactor": "inlet"
+            }
+        },
+        {
+            "id": "link_valve2_waste",
+            "source": "multiway_valve_2",
+            "target": "waste_workup",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_2": "6",
+                "waste_workup": "inlet"
+            }
+        },
+        {
+            "id": "link_valve2_collection1",
+            "source": "multiway_valve_2",
+            "target": "collection_bottle_1",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_2": "7",
+                "collection_bottle_1": "inlet"
+            }
+        },
+        {
+            "id": "link_valve2_collection2",
+            "source": "multiway_valve_2",
+            "target": "collection_bottle_2",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_2": "8",
+                "collection_bottle_2": "inlet"
+            }
+        },
+        {
+            "id": "link_stirrer1_main_reactor",
+            "source": "stirrer_1",
+            "target": "main_reactor",
+            "type": "mechanical",
+            "port": {
+                "stirrer_1": "stirrer_head",
+                "main_reactor": "stirrer_port"
+            }
+        },
+        {
+            "id": "link_stirrer2_secondary_reactor",
+            "source": "stirrer_2",
+            "target": "secondary_reactor",
+            "type": "mechanical",
+            "port": {
+                "stirrer_2": "stirrer_head",
+                "secondary_reactor": "stirrer_port"
+            }
+        },
+        {
+            "id": "link_heatchill1_main_reactor",
+            "source": "heatchill_1",
+            "target": "main_reactor",
+            "type": "thermal",
+            "port": {
+                "heatchill_1": "heating_surface",
+                "main_reactor": "heating_jacket"
+            }
+        },
+        {
+            "id": "link_heatchill2_secondary_reactor",
+            "source": "heatchill_2",
+            "target": "secondary_reactor",
+            "type": "thermal",
+            "port": {
+                "heatchill_2": "heating_surface",
+                "secondary_reactor": "heating_jacket"
+            }
+        },
+        {
+            "id": "link_valve1_ethanol",
+            "source": "multiway_valve_1",
+            "target": "flask_ethanol",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_1": "7",
+                "flask_ethanol": "outlet"
+            }
+        }
+    ]
+}

test/experiments/Protocol_Test_Station/pumptransfer_filterthrough_test_station.json

@@ -0,0 +1,778 @@
+{
+    "nodes": [
+        {
+            "id": "PumpTransferFilterThroughTestStation",
+            "name": "泵转移+过滤介质测试站",
+            "children": [
+                "transfer_pump_1",
+                "transfer_pump_2",
+                "multiway_valve_1",
+                "multiway_valve_2",
+                "reaction_mixture",
+                "crude_product",
+                "filter_celite",
+                "column_silica_gel",
+                "filter_C18",
+                "pure_product",
+                "collection_bottle_1",
+                "collection_bottle_2",
+                "collection_bottle_3",
+                "intermediate_vessel_1",
+                "intermediate_vessel_2",
+                "flask_water",
+                "flask_ethanol",
+                "flask_methanol",
+                "flask_ethyl_acetate",
+                "flask_acetone",
+                "flask_hexane",
+                "flask_air",
+                "waste_workup"
+            ],
+            "parent": null,
+            "type": "device",
+            "class": "workstation",
+            "position": {
+                "x": 500,
+                "y": 200,
+                "z": 0
+            },
+            "config": {
+                "protocol_type": [
+                    "PumpTransferProtocol",
+                    "FilterThroughProtocol"
+                ]
+            },
+            "data": {}
+        },
+        {
+            "id": "transfer_pump_1",
+            "name": "主转移泵",
+            "children": [],
+            "parent": "PumpTransferFilterThroughTestStation",
+            "type": "device",
+            "class": "virtual_transfer_pump",
+            "position": {
+                "x": 200,
+                "y": 300,
+                "z": 0
+            },
+            "config": {
+                "port": "VIRTUAL_PUMP1",
+                "max_volume": 25.0,
+                "transfer_rate": 2.0
+            },
+            "data": {
+                "position": 0.0,
+                "status": "Idle"
+            }
+        },
+        {
+            "id": "transfer_pump_2",
+            "name": "副转移泵",
+            "children": [],
+            "parent": "PumpTransferFilterThroughTestStation",
+            "type": "device",
+            "class": "virtual_transfer_pump",
+            "position": {
+                "x": 400,
+                "y": 300,
+                "z": 0
+            },
+            "config": {
+                "port": "VIRTUAL_PUMP2",
+                "max_volume": 25.0,
+                "transfer_rate": 2.0
+            },
+            "data": {
+                "position": 0.0,
+                "status": "Idle"
+            }
+        },
+        {
+            "id": "multiway_valve_1",
+            "name": "溶剂分配阀",
+            "children": [],
+            "parent": "PumpTransferFilterThroughTestStation",
+            "type": "device",
+            "class": "virtual_multiway_valve",
+            "position": {
+                "x": 200,
+                "y": 400,
+                "z": 0
+            },
+            "config": {
+                "port": "VIRTUAL_VALVE1",
+                "positions": 8
+            },
+            "data": {
+                "current_position": 1
+            }
+        },
+        {
+            "id": "multiway_valve_2",
+            "name": "样品分配阀",
+            "children": [],
+            "parent": "PumpTransferFilterThroughTestStation",
+            "type": "device",
+            "class": "virtual_multiway_valve",
+            "position": {
+                "x": 400,
+                "y": 400,
+                "z": 0
+            },
+            "config": {
+                "port": "VIRTUAL_VALVE2",
+                "positions": 8
+            },
+            "data": {
+                "current_position": 1
+            }
+        },
+        {
+            "id": "reaction_mixture",
+            "name": "反应混合物",
+            "children": [],
+            "parent": "PumpTransferFilterThroughTestStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 100,
+                "y": 500,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 1000.0
+            },
+            "data": {
+                "liquid": [
+                    {
+                        "liquid_type": "organic_reaction_mixture",
+                        "liquid_volume": 250.0
+                    }
+                ]
+            }
+        },
+        {
+            "id": "crude_product",
+            "name": "粗产品",
+            "children": [],
+            "parent": "PumpTransferFilterThroughTestStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 200,
+                "y": 500,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 1000.0
+            },
+            "data": {
+                "liquid": [
+                    {
+                        "liquid_type": "crude_organic_compound",
+                        "liquid_volume": 150.0
+                    }
+                ]
+            }
+        },
+        {
+            "id": "filter_celite",
+            "name": "硅藻土过滤器",
+            "children": [],
+            "parent": "PumpTransferFilterThroughTestStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 600,
+                "y": 450,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 300.0,
+                "filter_type": "celite_pad"
+            },
+            "data": {
+                "liquid": []
+            }
+        },
+        {
+            "id": "column_silica_gel",
+            "name": "硅胶柱",
+            "children": [],
+            "parent": "PumpTransferFilterThroughTestStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 700,
+                "y": 450,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 200.0,
+                "filter_type": "silica_gel_column"
+            },
+            "data": {
+                "liquid": []
+            }
+        },
+        {
+            "id": "filter_C18",
+            "name": "C18固相萃取柱",
+            "children": [],
+            "parent": "PumpTransferFilterThroughTestStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 800,
+                "y": 450,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 100.0,
+                "filter_type": "C18_cartridge"
+            },
+            "data": {
+                "liquid": []
+            }
+        },
+        {
+            "id": "pure_product",
+            "name": "纯产品",
+            "children": [],
+            "parent": "PumpTransferFilterThroughTestStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 900,
+                "y": 500,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 1000.0
+            },
+            "data": {
+                "liquid": []
+            }
+        },
+        {
+            "id": "collection_bottle_1",
+            "name": "收集瓶1",
+            "children": [],
+            "parent": "PumpTransferFilterThroughTestStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 600,
+                "y": 550,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 1000.0
+            },
+            "data": {
+                "liquid": []
+            }
+        },
+        {
+            "id": "collection_bottle_2",
+            "name": "收集瓶2",
+            "children": [],
+            "parent": "PumpTransferFilterThroughTestStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 700,
+                "y": 550,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 1000.0
+            },
+            "data": {
+                "liquid": []
+            }
+        },
+        {
+            "id": "collection_bottle_3",
+            "name": "收集瓶3",
+            "children": [],
+            "parent": "PumpTransferFilterThroughTestStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 800,
+                "y": 550,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 1000.0
+            },
+            "data": {
+                "liquid": []
+            }
+        },
+        {
+            "id": "intermediate_vessel_1",
+            "name": "中间容器1",
+            "children": [],
+            "parent": "PumpTransferFilterThroughTestStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 300,
+                "y": 500,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 1000.0
+            },
+            "data": {
+                "liquid": []
+            }
+        },
+        {
+            "id": "intermediate_vessel_2",
+            "name": "中间容器2",
+            "children": [],
+            "parent": "PumpTransferFilterThroughTestStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 400,
+                "y": 500,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 1000.0
+            },
+            "data": {
+                "liquid": []
+            }
+        },
+        {
+            "id": "flask_water",
+            "name": "蒸馏水瓶",
+            "children": [],
+            "parent": "PumpTransferFilterThroughTestStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 100,
+                "y": 600,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 1000.0
+            },
+            "data": {
+                "liquid": [
+                    {
+                        "liquid_type": "water",
+                        "liquid_volume": 900.0
+                    }
+                ]
+            }
+        },
+        {
+            "id": "flask_ethanol",
+            "name": "乙醇瓶",
+            "children": [],
+            "parent": "PumpTransferFilterThroughTestStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 200,
+                "y": 600,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 1000.0
+            },
+            "data": {
+                "liquid": [
+                    {
+                        "liquid_type": "ethanol",
+                        "liquid_volume": 800.0
+                    }
+                ]
+            }
+        },
+        {
+            "id": "flask_methanol",
+            "name": "甲醇瓶",
+            "children": [],
+            "parent": "PumpTransferFilterThroughTestStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 300,
+                "y": 600,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 1000.0
+            },
+            "data": {
+                "liquid": [
+                    {
+                        "liquid_type": "methanol",
+                        "liquid_volume": 800.0
+                    }
+                ]
+            }
+        },
+        {
+            "id": "flask_ethyl_acetate",
+            "name": "乙酸乙酯瓶",
+            "children": [],
+            "parent": "PumpTransferFilterThroughTestStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 400,
+                "y": 600,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 1000.0
+            },
+            "data": {
+                "liquid": [
+                    {
+                        "liquid_type": "ethyl_acetate",
+                        "liquid_volume": 800.0
+                    }
+                ]
+            }
+        },
+        {
+            "id": "flask_acetone",
+            "name": "丙酮瓶",
+            "children": [],
+            "parent": "PumpTransferFilterThroughTestStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 500,
+                "y": 600,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 1000.0
+            },
+            "data": {
+                "liquid": [
+                    {
+                        "liquid_type": "acetone",
+                        "liquid_volume": 800.0
+                    }
+                ]
+            }
+        },
+        {
+            "id": "flask_hexane",
+            "name": "正己烷瓶",
+            "children": [],
+            "parent": "PumpTransferFilterThroughTestStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 600,
+                "y": 600,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 1000.0
+            },
+            "data": {
+                "liquid": [
+                    {
+                        "liquid_type": "hexane",
+                        "liquid_volume": 800.0
+                    }
+                ]
+            }
+        },
+        {
+            "id": "flask_air",
+            "name": "空气瓶",
+            "children": [],
+            "parent": "PumpTransferFilterThroughTestStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 700,
+                "y": 600,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 1000.0
+            },
+            "data": {
+                "liquid": []
+            }
+        },
+        {
+            "id": "waste_workup",
+            "name": "废液瓶",
+            "children": [],
+            "parent": "PumpTransferFilterThroughTestStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 800,
+                "y": 600,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 2000.0
+            },
+            "data": {
+                "liquid": []
+            }
+        }
+    ],
+    "links": [
+        {
+            "id": "link_pump1_valve1",
+            "source": "transfer_pump_1",
+            "target": "multiway_valve_1",
+            "type": "fluid",
+            "port": {
+                "transfer_pump_1": "transferpump",
+                "multiway_valve_1": "transferpump"
+            }
+        },
+        {
+            "id": "link_pump2_valve2",
+            "source": "transfer_pump_2",
+            "target": "multiway_valve_2",
+            "type": "fluid",
+            "port": {
+                "transfer_pump_2": "transferpump",
+                "multiway_valve_2": "transferpump"
+            }
+        },
+        {
+            "id": "link_valve1_air",
+            "source": "multiway_valve_1",
+            "target": "flask_air",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_1": "1",
+                "flask_air": "top"
+            }
+        },
+        {
+            "id": "link_valve1_water",
+            "source": "multiway_valve_1",
+            "target": "flask_water",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_1": "2",
+                "flask_water": "outlet"
+            }
+        },
+        {
+            "id": "link_valve1_ethanol",
+            "source": "multiway_valve_1",
+            "target": "flask_ethanol",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_1": "3",
+                "flask_ethanol": "outlet"
+            }
+        },
+        {
+            "id": "link_valve1_methanol",
+            "source": "multiway_valve_1",
+            "target": "flask_methanol",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_1": "4",
+                "flask_methanol": "outlet"
+            }
+        },
+        {
+            "id": "link_valve1_ethyl_acetate",
+            "source": "multiway_valve_1",
+            "target": "flask_ethyl_acetate",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_1": "5",
+                "flask_ethyl_acetate": "outlet"
+            }
+        },
+        {
+            "id": "link_valve1_acetone",
+            "source": "multiway_valve_1",
+            "target": "flask_acetone",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_1": "6",
+                "flask_acetone": "outlet"
+            }
+        },
+        {
+            "id": "link_valve1_hexane",
+            "source": "multiway_valve_1",
+            "target": "flask_hexane",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_1": "7",
+                "flask_hexane": "outlet"
+            }
+        },
+        {
+            "id": "link_valve1_valve2",
+            "source": "multiway_valve_1",
+            "target": "multiway_valve_2",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_1": "8",
+                "multiway_valve_2": "1"
+            }
+        },
+        {
+            "id": "link_valve2_reaction_mixture",
+            "source": "multiway_valve_2",
+            "target": "reaction_mixture",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_2": "2",
+                "reaction_mixture": "inlet"
+            }
+        },
+        {
+            "id": "link_valve2_crude_product",
+            "source": "multiway_valve_2",
+            "target": "crude_product",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_2": "3",
+                "crude_product": "inlet"
+            }
+        },
+        {
+            "id": "link_valve2_intermediate1",
+            "source": "multiway_valve_2",
+            "target": "intermediate_vessel_1",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_2": "4",
+                "intermediate_vessel_1": "inlet"
+            }
+        },
+        {
+            "id": "link_valve2_intermediate2",
+            "source": "multiway_valve_2",
+            "target": "intermediate_vessel_2",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_2": "5",
+                "intermediate_vessel_2": "inlet"
+            }
+        },
+        {
+            "id": "link_valve2_celite",
+            "source": "multiway_valve_2",
+            "target": "filter_celite",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_2": "6",
+                "filter_celite": "inlet"
+            }
+        },
+        {
+            "id": "link_valve2_silica_gel",
+            "source": "multiway_valve_2",
+            "target": "column_silica_gel",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_2": "7",
+                "column_silica_gel": "inlet"
+            }
+        },
+        {
+            "id": "link_valve2_C18",
+            "source": "multiway_valve_2",
+            "target": "filter_C18",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_2": "8",
+                "filter_C18": "inlet"
+            }
+        },
+        {
+            "id": "link_celite_collection1",
+            "source": "filter_celite",
+            "target": "collection_bottle_1",
+            "type": "fluid",
+            "port": {
+                "filter_celite": "outlet",
+                "collection_bottle_1": "inlet"
+            }
+        },
+        {
+            "id": "link_silica_gel_collection2",
+            "source": "column_silica_gel",
+            "target": "collection_bottle_2",
+            "type": "fluid",
+            "port": {
+                "column_silica_gel": "outlet",
+                "collection_bottle_2": "inlet"
+            }
+        },
+        {
+            "id": "link_C18_collection3",
+            "source": "filter_C18",
+            "target": "collection_bottle_3",
+            "type": "fluid",
+            "port": {
+                "filter_C18": "outlet",
+                "collection_bottle_3": "inlet"
+            }
+        },
+        {
+            "id": "link_collection1_pure_product",
+            "source": "collection_bottle_1",
+            "target": "pure_product",
+            "type": "fluid",
+            "port": {
+                "collection_bottle_1": "outlet",
+                "pure_product": "inlet"
+            }
+        },
+        {
+            "id": "link_collection2_pure_product",
+            "source": "collection_bottle_2",
+            "target": "pure_product",
+            "type": "fluid",
+            "port": {
+                "collection_bottle_2": "outlet",
+                "pure_product": "inlet"
+            }
+        },
+        {
+            "id": "link_collection3_pure_product",
+            "source": "collection_bottle_3",
+            "target": "pure_product",
+            "type": "fluid",
+            "port": {
+                "collection_bottle_3": "outlet",
+                "pure_product": "inlet"
+            }
+        },
+        {
+            "id": "link_waste_connection",
+            "source": "pure_product",
+            "target": "waste_workup",
+            "type": "fluid",
+            "port": {
+                "pure_product": "waste_outlet",
+                "waste_workup": "inlet"
+            }
+        }
+    ]
+}

test/experiments/Protocol_Test_Station/pumptransfer_test_station.json

@@ -0,0 +1,304 @@
+{
+    "nodes": [
+        {
+            "id": "SimpleProtocolStation",
+            "name": "简单协议工作站",
+            "children": [
+                "transfer_pump_1",
+                "multiway_valve_1",
+                "flask_DMF",
+                "flask_ethyl_acetate", 
+                "flask_methanol",
+                "main_reactor",
+                "waste_workup",
+                "collection_bottle_1",
+                "flask_air"
+            ],
+            "parent": null,
+            "type": "device",
+            "class": "workstation",
+            "position": {
+                "x": 500,
+                "y": 200,
+                "z": 0
+            },
+            "config": {
+                "protocol_type": ["PumpTransferProtocol"]
+            },
+            "data": {}
+        },
+        {
+            "id": "transfer_pump_1",
+            "name": "转移泵1",
+            "children": [],
+            "parent": "SimpleProtocolStation",
+            "type": "device",
+            "class": "virtual_transfer_pump",
+            "position": {
+                "x": 500,
+                "y": 300,
+                "z": 0
+            },
+            "config": {
+                "port": "VIRTUAL",
+                "max_volume": 25.0,
+                "transfer_rate": 5.0
+            },
+            "data": {
+                "position": 0.0,
+                "status": "Idle",
+                "valve_position": "0"
+            }
+        },
+        {
+            "id": "multiway_valve_1",
+            "name": "八通阀1",
+            "children": [],
+            "parent": "SimpleProtocolStation",
+            "type": "device",
+            "class": "virtual_multiway_valve",
+            "position": {
+                "x": 500,
+                "y": 400,
+                "z": 0
+            },
+            "config": {
+                "port": "VIRTUAL",
+                "positions": 8
+            },
+            "data": {
+                "current_position": 1
+            }
+        },
+        {
+            "id": "flask_DMF",
+            "name": "DMF试剂瓶",
+            "children": [],
+            "parent": "SimpleProtocolStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 200,
+                "y": 500,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 1000.0
+            },
+            "data": {
+                "liquid": [
+                    {
+                        "liquid_type": "DMF",
+                        "liquid_volume": 800.0
+                    }
+                ]
+            }
+        },
+        {
+            "id": "flask_ethyl_acetate",
+            "name": "乙酸乙酯试剂瓶",
+            "children": [],
+            "parent": "SimpleProtocolStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 300,
+                "y": 500,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 1000.0
+            },
+            "data": {
+                "liquid": [
+                    {
+                        "liquid_type": "ethyl_acetate",
+                        "liquid_volume": 800.0
+                    }
+                ]
+            }
+        },
+        {
+            "id": "flask_methanol",
+            "name": "甲醇试剂瓶",
+            "children": [],
+            "parent": "SimpleProtocolStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 400,
+                "y": 500,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 1000.0
+            },
+            "data": {
+                "liquid": [
+                    {
+                        "liquid_type": "methanol",
+                        "liquid_volume": 800.0
+                    }
+                ]
+            }
+        },
+        {
+            "id": "main_reactor",
+            "name": "主反应器",
+            "children": [],
+            "parent": "SimpleProtocolStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 600,
+                "y": 500,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 2000.0
+            },
+            "data": {
+                "liquid": []
+            }
+        },
+        {
+            "id": "waste_workup",
+            "name": "废液处理瓶",
+            "children": [],
+            "parent": "SimpleProtocolStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 700,
+                "y": 500,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 2000.0
+            },
+            "data": {
+                "liquid": []
+            }
+        },
+        {
+            "id": "collection_bottle_1",
+            "name": "收集瓶1",
+            "children": [],
+            "parent": "SimpleProtocolStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 800,
+                "y": 500,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 1000.0
+            },
+            "data": {
+                "liquid": []
+            }
+        },
+        {
+            "id": "flask_air",
+            "name": "空气瓶",
+            "children": [],
+            "parent": "SimpleProtocolStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 100,
+                "y": 500,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 1000.0
+            },
+            "data": {
+                "liquid": []
+            }
+        }
+    ],
+    "links": [
+        {
+            "id": "link_pump_valve",
+            "source": "transfer_pump_1",
+            "target": "multiway_valve_1",
+            "type": "fluid",
+            "port": {
+                "transfer_pump_1": "transferpump", 
+                "multiway_valve_1": "transferpump"  
+            }
+        },
+        {
+            "id": "link_valve_air",
+            "source": "multiway_valve_1",
+            "target": "flask_air",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_1": "1",
+                "flask_air": "top"
+            }
+        },
+        {
+            "id": "link_valve_DMF",
+            "source": "multiway_valve_1",
+            "target": "flask_DMF",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_1": "2",
+                "flask_DMF": "outlet"
+            }
+        },
+        {
+            "id": "link_valve_ethyl_acetate",
+            "source": "multiway_valve_1",
+            "target": "flask_ethyl_acetate",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_1": "3",
+                "flask_ethyl_acetate": "outlet"
+            }
+        },
+        {
+            "id": "link_valve_methanol",
+            "source": "multiway_valve_1",
+            "target": "flask_methanol",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_1": "4",
+                "flask_methanol": "outlet"
+            }
+        },
+        {
+            "id": "link_valve_reactor",
+            "source": "multiway_valve_1",
+            "target": "main_reactor",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_1": "5",
+                "main_reactor": "inlet"
+            }
+        },
+        {
+            "id": "link_valve_waste",
+            "source": "multiway_valve_1",
+            "target": "waste_workup",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_1": "6",
+                "waste_workup": "inlet"
+            }
+        },
+        {
+            "id": "link_valve_collection",
+            "source": "multiway_valve_1",
+            "target": "collection_bottle_1",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_1": "7",
+                "collection_bottle_1": "inlet"
+            }
+        }
+    ]
+}

test/experiments/Protocol_Test_Station/run_column_protocol_test_station.json

@@ -0,0 +1,432 @@
+{
+    "nodes": [
+        {
+            "id": "RunColumnTestStation",
+            "name": "柱层析测试工作站",
+            "children": [
+                "transfer_pump_1",
+                "multiway_valve_1",
+                "column_1",
+                "flask_sample",
+                "flask_hexane",
+                "flask_ethyl_acetate",
+                "flask_methanol",
+                "column_vessel",
+                "collection_flask_1",
+                "collection_flask_2",
+                "collection_flask_3",
+                "waste_flask",
+                "main_reactor"
+            ],
+            "parent": null,
+            "type": "device",
+            "class": "workstation",
+            "position": {
+                "x": 500,
+                "y": 200,
+                "z": 0
+            },
+            "config": {
+                "protocol_type": ["RunColumnProtocol", "PumpTransferProtocol"]
+            },
+            "data": {}
+        },
+        {
+            "id": "transfer_pump_1",
+            "name": "转移泵",
+            "children": [],
+            "parent": "RunColumnTestStation",
+            "type": "device",
+            "class": "virtual_transfer_pump",
+            "position": {
+                "x": 300,
+                "y": 300,
+                "z": 0
+            },
+            "config": {
+                "port": "VIRTUAL_PUMP1",
+                "max_volume": 50.0,
+                "transfer_rate": 10.0
+            },
+            "data": {
+                "status": "Idle",
+                "position": 0.0
+            }
+        },
+        {
+            "id": "multiway_valve_1",
+            "name": "八通阀门",
+            "children": [],
+            "parent": "RunColumnTestStation",
+            "type": "device",
+            "class": "virtual_multiway_valve",
+            "position": {
+                "x": 300,
+                "y": 400,
+                "z": 0
+            },
+            "config": {
+                "port": "VIRTUAL_VALVE1",
+                "positions": 8
+            },
+            "data": {
+                "current_position": 1
+            }
+        },
+        {
+            "id": "column_1",
+            "name": "柱层析设备",
+            "children": [],
+            "parent": "RunColumnTestStation",
+            "type": "device",
+            "class": "virtual_column",
+            "position": {
+                "x": 600,
+                "y": 350,
+                "z": 0
+            },
+            "config": {
+                "port": "VIRTUAL_COLUMN1",
+                "max_flow_rate": 5.0,
+                "column_length": 30.0,
+                "column_diameter": 2.5
+            },
+            "data": {
+                "status": "Idle",
+                "column_state": "Ready"
+            }
+        },
+        {
+            "id": "flask_sample",
+            "name": "样品瓶",
+            "children": [],
+            "parent": "RunColumnTestStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 100,
+                "y": 500,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 500.0
+            },
+            "data": {
+                "liquid": [
+                    {
+                        "name": "crude_mixture",
+                        "volume": 200.0,
+                        "concentration": 70.0
+                    }
+                ]
+            }
+        },
+        {
+            "id": "flask_hexane",
+            "name": "正己烷洗脱剂",
+            "children": [],
+            "parent": "RunColumnTestStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 200,
+                "y": 500,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 2000.0
+            },
+            "data": {
+                "liquid": [
+                    {
+                        "name": "hexane",
+                        "volume": 1500.0,
+                        "concentration": 99.8
+                    }
+                ]
+            }
+        },
+        {
+            "id": "flask_ethyl_acetate",
+            "name": "乙酸乙酯洗脱剂",
+            "children": [],
+            "parent": "RunColumnTestStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 300,
+                "y": 500,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 2000.0
+            },
+            "data": {
+                "liquid": [
+                    {
+                        "name": "ethyl_acetate",
+                        "volume": 1500.0,
+                        "concentration": 99.5
+                    }
+                ]
+            }
+        },
+        {
+            "id": "flask_methanol",
+            "name": "甲醇洗脱剂",
+            "children": [],
+            "parent": "RunColumnTestStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 400,
+                "y": 500,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 1000.0
+            },
+            "data": {
+                "liquid": [
+                    {
+                        "name": "methanol",
+                        "volume": 800.0,
+                        "concentration": 99.9
+                    }
+                ]
+            }
+        },
+        {
+            "id": "column_vessel",
+            "name": "柱容器",
+            "children": [],
+            "parent": "RunColumnTestStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 600,
+                "y": 450,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 300.0
+            },
+            "data": {
+                "liquid": []
+            }
+        },
+        {
+            "id": "collection_flask_1",
+            "name": "收集瓶1",
+            "children": [],
+            "parent": "RunColumnTestStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 700,
+                "y": 500,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 1000.0
+            },
+            "data": {
+                "liquid": []
+            }
+        },
+        {
+            "id": "collection_flask_2",
+            "name": "收集瓶2",
+            "children": [],
+            "parent": "RunColumnTestStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 800,
+                "y": 500,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 1000.0
+            },
+            "data": {
+                "liquid": []
+            }
+        },
+        {
+            "id": "collection_flask_3",
+            "name": "收集瓶3",
+            "children": [],
+            "parent": "RunColumnTestStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 900,
+                "y": 500,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 1000.0
+            },
+            "data": {
+                "liquid": []
+            }
+        },
+        {
+            "id": "waste_flask",
+            "name": "废液瓶",
+            "children": [],
+            "parent": "RunColumnTestStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 1000,
+                "y": 500,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 2000.0
+            },
+            "data": {
+                "liquid": []
+            }
+        },
+        {
+            "id": "main_reactor",
+            "name": "反应器",
+            "children": [],
+            "parent": "RunColumnTestStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 600,
+                "y": 300,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 1000.0
+            },
+            "data": {
+                "liquid": [
+                    {
+                        "name": "reaction_mixture",
+                        "volume": 300.0,
+                        "concentration": 85.0
+                    }
+                ]
+            }
+        }
+    ],
+    "links": [
+        {
+            "id": "link_pump_valve",
+            "source": "transfer_pump_1",
+            "target": "multiway_valve_1",
+            "type": "fluid",
+            "port": {
+                "transfer_pump_1": "transferpump",
+                "multiway_valve_1": "transferpump"
+            }
+        },
+        {
+            "id": "link_valve_sample",
+            "source": "multiway_valve_1",
+            "target": "flask_sample",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_1": "1",
+                "flask_sample": "outlet"
+            }
+        },
+        {
+            "id": "link_valve_hexane",
+            "source": "multiway_valve_1",
+            "target": "flask_hexane",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_1": "2",
+                "flask_hexane": "outlet"
+            }
+        },
+        {
+            "id": "link_valve_ethyl_acetate",
+            "source": "multiway_valve_1",
+            "target": "flask_ethyl_acetate",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_1": "3",
+                "flask_ethyl_acetate": "outlet"
+            }
+        },
+        {
+            "id": "link_valve_methanol",
+            "source": "multiway_valve_1",
+            "target": "flask_methanol",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_1": "4",
+                "flask_methanol": "outlet"
+            }
+        },
+        {
+            "id": "link_valve_column_vessel",
+            "source": "multiway_valve_1",
+            "target": "column_vessel",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_1": "5",
+                "column_vessel": "inlet"
+            }
+        },
+        {
+            "id": "link_valve_collection1",
+            "source": "multiway_valve_1",
+            "target": "collection_flask_1",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_1": "6",
+                "collection_flask_1": "inlet"
+            }
+        },
+        {
+            "id": "link_valve_collection2",
+            "source": "multiway_valve_1",
+            "target": "collection_flask_2",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_1": "7",
+                "collection_flask_2": "inlet"
+            }
+        },
+        {
+            "id": "link_valve_waste",
+            "source": "multiway_valve_1",
+            "target": "waste_flask",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_1": "8",
+                "waste_flask": "inlet"
+            }
+        },
+        {
+            "id": "link_column_device_vessel",
+            "source": "column_1",
+            "target": "column_vessel",
+            "type": "transport",
+            "port": {
+                "column_1": "columnin",
+                "column_vessel": "column_port"
+            }
+        },
+        {
+            "id": "link_column_collection3",
+            "source": "column_1",
+            "target": "collection_flask_3",
+            "type": "transport",
+            "port": {
+                "column_1": "columnout",
+                "collection_flask_3": "column_outlet"
+            }
+        }
+    ]
+}

test/experiments/Protocol_Test_Station/simple_stir_heatchill_test_station.json

@@ -0,0 +1,141 @@
+{
+    "nodes": [
+        {
+            "id": "SimpleStirHeatChillTestStation",
+            "name": "搅拌加热测试站",
+            "children": [
+                "stirrer_1",
+                "heatchill_1",
+                "main_reactor",
+                "secondary_reactor"
+            ],
+            "parent": null,
+            "type": "device",
+            "class": "workstation",
+            "position": {
+                "x": 500,
+                "y": 200,
+                "z": 0
+            },
+            "config": {
+                "protocol_type": [
+                    "StirProtocol",
+                    "StartStirProtocol", 
+                    "StopStirProtocol",
+                    "HeatChillProtocol", 
+                    "HeatChillStartProtocol", 
+                    "HeatChillStopProtocol"
+                ]
+            },
+            "data": {}
+        },
+        {
+            "id": "stirrer_1",
+            "name": "主搅拌器",
+            "children": [],
+            "parent": "SimpleStirHeatChillTestStation",
+            "type": "device",
+            "class": "virtual_stirrer",
+            "position": {
+                "x": 400,
+                "y": 350,
+                "z": 0
+            },
+            "config": {
+                "port": "VIRTUAL_STIRRER1",
+                "max_speed": 1500.0,
+                "min_speed": 50.0
+            },
+            "data": {
+                "status": "Idle"
+            }
+        },
+        {
+            "id": "heatchill_1",
+            "name": "主加热冷却器",
+            "children": [],
+            "parent": "SimpleStirHeatChillTestStation",
+            "type": "device",
+            "class": "virtual_heatchill",
+            "position": {
+                "x": 600,
+                "y": 350,
+                "z": 0
+            },
+            "config": {
+                "port": "VIRTUAL_HEATCHILL1",
+                "max_temp": 200.0,
+                "min_temp": -80.0,
+                "max_stir_speed": 1000.0
+            },
+            "data": {
+                "status": "Idle"
+            }
+        },
+        {
+            "id": "main_reactor",
+            "name": "主反应器",
+            "children": [],
+            "parent": "SimpleStirHeatChillTestStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 500,
+                "y": 450,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 2000.0
+            },
+            "data": {
+                "liquid": [
+                    {
+                        "liquid_type": "water",
+                        "liquid_volume": 500.0
+                    }
+                ]
+            }
+        },
+        {
+            "id": "secondary_reactor",
+            "name": "副反应器",
+            "children": [],
+            "parent": "SimpleStirHeatChillTestStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 700,
+                "y": 450,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 1000.0
+            },
+            "data": {
+                "liquid": []
+            }
+        }
+    ],
+    "links": [
+        {
+            "id": "link_stirrer1_main_reactor",
+            "source": "stirrer_1",
+            "target": "main_reactor",
+            "type": "mechanical",
+            "port": {
+                "stirrer_1": "stirrer",
+                "main_reactor": "stirrer_port"
+            }
+        },
+        {
+            "id": "link_heatchill1_main_reactor",
+            "source": "heatchill_1",
+            "target": "main_reactor",
+            "type": "mechanical",
+            "port": {
+                "heatchill_1": "heatchill",
+                "main_reactor": "heating_jacket"
+            }
+        }
+    ]
+}

test/experiments/comprehensive_protocol/checklist.md

@@ -0,0 +1,36 @@
+1. 用到的仪器
+                virtual_multiway_valve(√)                                                     八通阀门
+                virtual_transfer_pump(√)                                                        转移泵
+                virtual_centrifuge()                                                            离心机
+                virtual_rotavap()                                                               旋蒸仪
+                virtual_heatchill()                                                             加热器
+                virtual_stirrer()                                                               搅拌器
+                virtual_solenoid_valve()                                                        电磁阀
+                virtual_vacuum_pump(√)                       vacuum_pump.mock                            真空泵
+                virtual_gas_source(√)                                                                    气源
+                virtual_filter()                                                                过滤器
+                virtual_column(√)                                                               层析柱
+                separator()                         homemade_grbl_conductivity                  分液漏斗
+2. 用到的protocol
+    PumpTransferProtocol: generate_pump_protocol_with_rinsing,                      (√)
+    这个重复了，删掉CleanProtocol: generate_clean_protocol,
+    SeparateProtocol: generate_separate_protocol,                           (×)
+    EvaporateProtocol: generate_evaporate_protocol,                                 (√)
+    EvacuateAndRefillProtocol: generate_evacuateandrefill_protocol,                 (√)
+    CentrifugeProtocol: generate_centrifuge_protocol,                               (√)
+    AddProtocol: generate_add_protocol,                                             (√)
+    FilterProtocol: generate_filter_protocol,                                       (√)
+    HeatChillProtocol: generate_heat_chill_protocol,                                (√)
+    HeatChillStartProtocol: generate_heat_chill_start_protocol,                     (√)
+    HeatChillStopProtocol: generate_heat_chill_stop_protocol,                       (√)
+    StirProtocol: generate_stir_protocol,                                           (√)
+    StartStirProtocol: generate_start_stir_protocol,                                (√)
+    StopStirProtocol: generate_stop_stir_protocol,                                  (√)
+    这个重复了，删掉TransferProtocol: generate_transfer_protocol,
+    CleanVesselProtocol: generate_clean_vessel_protocol,                            (√)
+    DissolveProtocol: generate_dissolve_protocol,                                   (√)
+    FilterThroughProtocol: generate_filter_through_protocol,                        (√)
+    RunColumnProtocol: generate_run_column_protocol,                        (×)
+    WashSolidProtocol: generate_wash_solid_protocol,                        (×)
+
+上下文体积搜索

test/experiments/comprehensive_protocol/comprehensive_station.json

@@ -0,0 +1,857 @@
+{
+    "nodes": [
+        {
+            "id": "ComprehensiveProtocolStation",
+            "name": "综合协议测试工作站",
+            "children": [
+                "multiway_valve_1",
+                "multiway_valve_2",
+                "transfer_pump_1",
+                "transfer_pump_2",
+                "reagent_bottle_1",
+                "reagent_bottle_2",
+                "reagent_bottle_3",
+                "reagent_bottle_4",
+                "reagent_bottle_5",
+                "centrifuge_1",
+                "rotavap_1",
+                "main_reactor",
+                "heater_1",
+                "stirrer_1",
+                "stirrer_2",
+                "waste_bottle_1",
+                "waste_bottle_2",
+                "solenoid_valve_1",
+                "solenoid_valve_2",
+                "vacuum_pump_1",
+                "gas_source_1",
+                "filter_1",
+                "column_1",
+                "separator_1",
+                "collection_bottle_1",
+                "collection_bottle_2",
+                "collection_bottle_3"
+            ],
+            "parent": null,
+            "type": "device",
+            "class": "workstation",
+            "position": {
+                "x": 600,
+                "y": 400,
+                "z": 0
+            },
+            "config": {
+                "protocol_type": [
+                    "AddProtocol",
+                    "TransferProtocol",
+                    "StartStirProtocol",
+                    "StopStirProtocol",
+                    "StirProtocol",
+                    "RunColumnProtocol",
+                    "CentrifugeProtocol",
+                    "FilterProtocol",
+                    "CleanVesselProtocol",
+                    "DissolveProtocol",
+                    "FilterThroughProtocol",
+                    "WashSolidProtocol",
+                    "SeparateProtocol",
+                    "EvaporateProtocol",
+                    "HeatChillProtocol",
+                    "HeatChillStartProtocol",
+                    "HeatChillStopProtocol",
+                    "EvacuateAndRefillProtocol",
+                    "PumpTransferProtocol"
+                ]
+            },
+            "data": {}
+        },
+        {
+            "id": "multiway_valve_1",
+            "name": "八通阀门1",
+            "children": [],
+            "parent": "ComprehensiveProtocolStation",
+            "type": "device",
+            "class": "virtual_multiway_valve",
+            "position": {
+                "x": 400,
+                "y": 300,
+                "z": 0
+            },
+            "config": {
+                "positions": 8
+            },
+            "data": {
+                "valve_state": "Ready",
+                "current_position": 1
+            }
+        },
+        {
+            "id": "multiway_valve_2",
+            "name": "八通阀门2",
+            "children": [],
+            "parent": "ComprehensiveProtocolStation",
+            "type": "device",
+            "class": "virtual_multiway_valve",
+            "position": {
+                "x": 800,
+                "y": 300,
+                "z": 0
+            },
+            "config": {
+                "positions": 8
+            },
+            "data": {
+                "valve_state": "Ready",
+                "current_position": 1
+            }
+        },
+        {
+            "id": "transfer_pump_1",
+            "name": "转移泵1",
+            "children": [],
+            "parent": "ComprehensiveProtocolStation",
+            "type": "device",
+            "class": "virtual_transfer_pump",
+            "position": {
+                "x": 350,
+                "y": 250,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 25.0,
+                "transfer_rate": 10.0
+            },
+            "data": {
+                "status": "Idle",
+                "current_volume": 0.0
+            }
+        },
+        {
+            "id": "transfer_pump_2",
+            "name": "转移泵2",
+            "children": [],
+            "parent": "ComprehensiveProtocolStation",
+            "type": "device",
+            "class": "virtual_transfer_pump",
+            "position": {
+                "x": 850,
+                "y": 250,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 25.0,
+                "transfer_rate": 10.0
+            },
+            "data": {
+                "status": "Idle",
+                "current_volume": 0.0
+            }
+        },
+        {
+            "id": "reagent_bottle_1",
+            "name": "试剂瓶1-DMF",
+            "children": [],
+            "parent": "ComprehensiveProtocolStation",
+            "type": "container",
+            "class": "container",
+            "position": {
+                "x": 200,
+                "y": 150,
+                "z": 0
+            },
+            "config": {
+                "volume": 1000.0,
+                "reagent": "DMF"
+            },
+            "data": {
+                "current_volume": 1000.0,
+                "reagent_name": "DMF"
+            }
+        },
+        {
+            "id": "reagent_bottle_2",
+            "name": "试剂瓶2-乙酸乙酯",
+            "children": [],
+            "parent": "ComprehensiveProtocolStation",
+            "type": "container",
+            "class": "container",
+            "position": {
+                "x": 250,
+                "y": 150,
+                "z": 0
+            },
+            "config": {
+                "volume": 1000.0,
+                "reagent": "ethyl_acetate"
+            },
+            "data": {
+                "current_volume": 1000.0,
+                "reagent_name": "ethyl_acetate"
+            }
+        },
+        {
+            "id": "reagent_bottle_3",
+            "name": "试剂瓶3-己烷",
+            "children": [],
+            "parent": "ComprehensiveProtocolStation",
+            "type": "container",
+            "class": "container",
+            "position": {
+                "x": 300,
+                "y": 150,
+                "z": 0
+            },
+            "config": {
+                "volume": 1000.0,
+                "reagent": "hexane"
+            },
+            "data": {
+                "current_volume": 1000.0,
+                "reagent_name": "hexane"
+            }
+        },
+        {
+            "id": "reagent_bottle_4",
+            "name": "试剂瓶4-甲醇",
+            "children": [],
+            "parent": "ComprehensiveProtocolStation",
+            "type": "container",
+            "class": "container",
+            "position": {
+                "x": 900,
+                "y": 150,
+                "z": 0
+            },
+            "config": {
+                "volume": 1000.0,
+                "reagent": "methanol"
+            },
+            "data": {
+                "current_volume": 1000.0,
+                "reagent_name": "methanol"
+            }
+        },
+        {
+            "id": "reagent_bottle_5",
+            "name": "试剂瓶5-水",
+            "children": [],
+            "parent": "ComprehensiveProtocolStation",
+            "type": "container",
+            "class": "container",
+            "position": {
+                "x": 950,
+                "y": 150,
+                "z": 0
+            },
+            "config": {
+                "volume": 1000.0,
+                "reagent": "water"
+            },
+            "data": {
+                "current_volume": 1000.0,
+                "reagent_name": "water"
+            }
+        },
+        {
+            "id": "centrifuge_1",
+            "name": "离心机",
+            "children": [],
+            "parent": "ComprehensiveProtocolStation",
+            "type": "device",
+            "class": "virtual_centrifuge",
+            "position": {
+                "x": 200,
+                "y": 400,
+                "z": 0
+            },
+            "config": {
+                "max_speed": 15000.0,
+                "max_temp": 40.0,
+                "min_temp": 4.0
+            },
+            "data": {
+                "current_speed": 0.0,
+                "status": "Idle"
+            }
+        },
+        {
+            "id": "rotavap_1",
+            "name": "旋转蒸发仪",
+            "children": [],
+            "parent": "ComprehensiveProtocolStation",
+            "type": "device",
+            "class": "virtual_rotavap",
+            "position": {
+                "x": 300,
+                "y": 400,
+                "z": 0
+            },
+            "config": {
+                "max_temp": 180.0,
+                "max_rotation_speed": 280.0
+            },
+            "data": {
+                "status": "Idle",
+                "current_temp": 25.0,
+                "rotation_speed": 0.0
+            }
+        },
+        {
+            "id": "main_reactor",
+            "name": "主反应器",
+            "children": [],
+            "parent": "ComprehensiveProtocolStation",
+            "type": "container",
+            "class": "container",
+            "position": {
+                "x": 400,
+                "y": 450,
+                "z": 0
+            },
+            "config": {
+                "volume": 500.0,
+                "max_temp": 200.0,
+                "min_temp": -20.0,
+                "has_stirrer": true,
+                "has_heater": true
+            },
+            "data": {
+                "current_volume": 0.0,
+                "current_temp": 25.0
+            }
+        },
+        {
+            "id": "heater_1",
+            "name": "加热器",
+            "children": [],
+            "parent": "ComprehensiveProtocolStation",
+            "type": "device",
+            "class": "virtual_heatchill",
+            "position": {
+                "x": 450,
+                "y": 450,
+                "z": 0
+            },
+            "config": {
+                "max_temp": 200.0,
+                "min_temp": -20.0
+            },
+            "data": {
+                "status": "Idle",
+                "current_temp": 25.0
+            }
+        },
+        {
+            "id": "stirrer_1",
+            "name": "搅拌器1",
+            "children": [],
+            "parent": "ComprehensiveProtocolStation",
+            "type": "device",
+            "class": "virtual_stirrer",
+            "position": {
+                "x": 350,
+                "y": 450,
+                "z": 0
+            },
+            "config": {
+                "max_speed": 2000.0
+            },
+            "data": {
+                "status": "Idle",
+                "current_speed": 0.0
+            }
+        },
+        {
+            "id": "stirrer_2",
+            "name": "搅拌器2",
+            "children": [],
+            "parent": "ComprehensiveProtocolStation",
+            "type": "device",
+            "class": "virtual_stirrer",
+            "position": {
+                "x": 351,
+                "y": 451,
+                "z": 0
+            },
+            "config": {
+                "max_speed": 2000.0
+            },
+            "data": {
+                "status": "Idle",
+                "current_speed": 0.0
+            }
+        },
+        {
+            "id": "waste_bottle_1",
+            "name": "废液瓶1",
+            "children": [],
+            "parent": "ComprehensiveProtocolStation",
+            "type": "container",
+            "class": "container",
+            "position": {
+                "x": 500,
+                "y": 400,
+                "z": 0
+            },
+            "config": {
+                "volume": 2000.0
+            },
+            "data": {
+                "current_volume": 0.0
+            }
+        },
+        {
+            "id": "waste_bottle_2",
+            "name": "废液瓶2",
+            "children": [],
+            "parent": "ComprehensiveProtocolStation",
+            "type": "container",
+            "class": "container",
+            "position": {
+                "x": 1100,
+                "y": 500,
+                "z": 0
+            },
+            "config": {
+                "volume": 2000.0
+            },
+            "data": {
+                "current_volume": 0.0
+            }
+        },
+        {
+            "id": "solenoid_valve_1",
+            "name": "电磁阀1",
+            "children": [],
+            "parent": "ComprehensiveProtocolStation",
+            "type": "device",
+            "class": "virtual_solenoid_valve",
+            "position": {
+                "x": 700,
+                "y": 200,
+                "z": 0
+            },
+            "config": {
+                "voltage": 12.0,
+                "response_time": 0.1
+            },
+            "data": {
+                "valve_state": "Closed",
+                "is_open": false
+            }
+        },
+        {
+            "id": "solenoid_valve_2",
+            "name": "电磁阀2",
+            "children": [],
+            "parent": "ComprehensiveProtocolStation",
+            "type": "device",
+            "class": "virtual_solenoid_valve",
+            "position": {
+                "x": 700,
+                "y": 150,
+                "z": 0
+            },
+            "config": {
+                "voltage": 12.0,
+                "response_time": 0.1
+            },
+            "data": {
+                "valve_state": "Closed",
+                "is_open": false
+            }
+        },
+        {
+            "id": "vacuum_pump_1",
+            "name": "真空泵",
+            "children": [],
+            "parent": "ComprehensiveProtocolStation",
+            "type": "device",
+            "class": "virtual_vacuum_pump",
+            "position": {
+                "x": 650,
+                "y": 200,
+                "z": 0
+            },
+            "config": {
+                "max_vacuum": 0.1,
+                "pump_rate": 50.0
+            },
+            "data": {
+                "status": "Off",
+                "current_vacuum": 1.0
+            }
+        },
+        {
+            "id": "gas_source_1",
+            "name": "气源",
+            "children": [],
+            "parent": "ComprehensiveProtocolStation",
+            "type": "device",
+            "class": "virtual_gas_source",
+            "position": {
+                "x": 650,
+                "y": 150,
+                "z": 0
+            },
+            "config": {},
+            "data": {
+                "gas_type": "nitrogen",
+                "max_pressure": 5.0
+            }
+        },
+        {
+            "id": "filter_1",
+            "name": "过滤器",
+            "children": [],
+            "parent": "ComprehensiveProtocolStation",
+            "type": "device",
+            "class": "virtual_filter",
+            "position": {
+                "x": 900,
+                "y": 400,
+                "z": 0
+            },
+            "config": {
+                "filter_type": "membrane",
+                "max_pressure": 5.0
+            },
+            "data": {
+                "status": "Ready",
+                "pressure": 0.0
+            }
+        },
+        {
+            "id": "column_1",
+            "name": "洗脱柱",
+            "children": [],
+            "parent": "ComprehensiveProtocolStation",
+            "type": "device",
+            "class": "virtual_column",
+            "position": {
+                "x": 950,
+                "y": 400,
+                "z": 0
+            },
+            "config": {
+                "column_type": "silica_gel",
+                "length": 30.0,
+                "diameter": 2.5
+            },
+            "data": {
+                "status": "Ready",
+                "loaded": false
+            }
+        },
+        {
+            "id": "separator_1",
+            "name": "分液器",
+            "children": [],
+            "parent": "ComprehensiveProtocolStation",
+            "type": "device",
+            "class": "virtual_separator",
+            "position": {
+                "x": 1000,
+                "y": 450,
+                "z": 0
+            },
+            "config": {
+                "volume": 250.0,
+                "has_phases": true
+            },
+            "data": {
+                "status": "Ready",
+                "phase_separation": false
+            }
+        },
+        {
+            "id": "collection_bottle_1",
+            "name": "接收瓶1",
+            "children": [],
+            "parent": "ComprehensiveProtocolStation",
+            "type": "container",
+            "class": "container",
+            "position": {
+                "x": 900,
+                "y": 500,
+                "z": 0
+            },
+            "config": {
+                "volume": 250.0
+            },
+            "data": {
+                "current_volume": 0.0
+            }
+        },
+        {
+            "id": "collection_bottle_2",
+            "name": "接收瓶2",
+            "children": [],
+            "parent": "ComprehensiveProtocolStation",
+            "type": "container",
+            "class": "container",
+            "position": {
+                "x": 950,
+                "y": 500,
+                "z": 0
+            },
+            "config": {
+                "volume": 250.0
+            },
+            "data": {
+                "current_volume": 0.0
+            }
+        },
+        {
+            "id": "collection_bottle_3",
+            "name": "接收瓶3",
+            "children": [],
+            "parent": "ComprehensiveProtocolStation",
+            "type": "container",
+            "class": "container",
+            "position": {
+                "x": 1050,
+                "y": 500,
+                "z": 0
+            },
+            "config": {
+                "volume": 250.0
+            },
+            "data": {
+                "current_volume": 0.0
+            }
+        }
+    ],
+    "links": [
+        {
+            "id": "link_pump1_valve1",
+            "source": "transfer_pump_1",
+            "target": "multiway_valve_1",
+            "type": "fluid",
+            "port": {
+                "transfer_pump_1": "transferpump",
+                "multiway_valve_1": "transferpump"
+            }
+        },
+        {
+            "id": "link_valve1_reagent1",
+            "source": "multiway_valve_1",
+            "target": "reagent_bottle_1",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_1": "1",
+                "reagent_bottle_1": "top"
+            }
+        },
+        {
+            "id": "link_valve1_reagent2",
+            "source": "multiway_valve_1",
+            "target": "reagent_bottle_2",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_1": "2",
+                "reagent_bottle_2": "top"
+            }
+        },
+        {
+            "id": "link_valve1_reagent3",
+            "source": "multiway_valve_1",
+            "target": "reagent_bottle_3",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_1": "3",
+                "reagent_bottle_3": "top"
+            }
+        },
+        {
+            "id": "link_valve1_centrifuge",
+            "source": "multiway_valve_1",
+            "target": "centrifuge_1",
+            "type": "transport",
+            "port": {
+                "multiway_valve_1": "4",
+                "centrifuge_1": "centrifuge"
+            }
+        },
+        {
+            "id": "link_valve1_rotavap",
+            "source": "multiway_valve_1",
+            "target": "rotavap_1",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_1": "5",
+                "rotavap_1": "sample_in"
+            }
+        },
+        {
+            "id": "link_valve1_reactor",
+            "source": "multiway_valve_1",
+            "target": "main_reactor",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_1": "6",
+                "main_reactor": "top"
+            }
+        },
+        {
+            "id": "link_valve1_waste1",
+            "source": "multiway_valve_1",
+            "target": "waste_bottle_1",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_1": "7",
+                "waste_bottle_1": "top"
+            }
+        },
+        {
+            "id": "link_valve1_valve2",
+            "source": "multiway_valve_1",
+            "target": "multiway_valve_2",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_1": "8",
+                "multiway_valve_2": "1"
+            }
+        },
+        {
+            "id": "link_pump2_valve2",
+            "source": "transfer_pump_2",
+            "target": "multiway_valve_2",
+            "type": "fluid",
+            "port": {
+                "transfer_pump_2": "transferpump",
+                "multiway_valve_2": "transferpump"
+            }
+        },
+        {
+            "id": "link_valve2_solenoid1",
+            "source": "multiway_valve_2",
+            "target": "solenoid_valve_1",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_2": "2",
+                "solenoid_valve_1": "in"
+            }
+        },
+        {
+            "id": "link_vacuum_solenoid1",
+            "source": "vacuum_pump_1",
+            "target": "solenoid_valve_1",
+            "type": "fluid",
+            "port": {
+                "vacuum_pump_1": "vacuumpump",
+                "solenoid_valve_1": "out"
+            }
+        },
+        {
+            "id": "link_valve2_solenoid2",
+            "source": "multiway_valve_2",
+            "target": "solenoid_valve_2",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_2": "3",
+                "solenoid_valve_2": "in"
+            }
+        },
+        {
+            "id": "link_gas_solenoid2",
+            "source": "gas_source_1",
+            "target": "solenoid_valve_2",
+            "type": "fluid",
+            "port": {
+                "gas_source_1": "gassource",
+                "solenoid_valve_2": "out"
+            }
+        },
+        {
+            "id": "link_valve2_filter",
+            "source": "multiway_valve_2",
+            "target": "filter_1",
+            "type": "transport",
+            "port": {
+                "multiway_valve_2": "4",
+                "filter_1": "filter_in"
+            }
+        },
+        {
+            "id": "link_valve2_column",
+            "source": "multiway_valve_2",
+            "target": "column_1",
+            "type": "transport",
+            "port": {
+                "multiway_valve_2": "5",
+                "column_1": "columnin"
+            }
+        },
+        {
+            "id": "link_column_collection2",
+            "source": "column_1",
+            "target": "collection_bottle_2",
+            "type": "transport",
+            "port": {
+                "column_1": "columnout",
+                "collection_bottle_2": "top"
+            }
+        },
+        {
+            "id": "link_valve2_separator",
+            "source": "multiway_valve_2",
+            "target": "separator_1",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_2": "6",
+                "separator_1": "separator_in"
+            }
+        },
+        {
+            "id": "link_separator_collection3",
+            "source": "separator_1",
+            "target": "collection_bottle_3",
+            "type": "fluid",
+            "port": {
+                "separator_1": "bottom_phase_out",
+                "collection_bottle_3": "top"
+            }
+        },
+        {
+            "id": "link_valve2_reagent4",
+            "source": "multiway_valve_2",
+            "target": "reagent_bottle_4",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_2": "7",
+                "reagent_bottle_4": "top"
+            }
+        },
+        {
+            "id": "link_valve2_reagent5",
+            "source": "multiway_valve_2",
+            "target": "reagent_bottle_5",
+            "type": "fluid",
+            "port": {
+                "multiway_valve_2": "8",
+                "reagent_bottle_5": "top"
+            }
+        },
+        {
+            "id": "mech_stirrer_reactor",
+            "source": "stirrer_1",
+            "target": "main_reactor",
+            "type": "mechanical",
+            "port": {
+                "stirrer_1": "stirrer",
+                "main_reactor": "bind"
+            }
+        },
+        {
+            "id": "thermal_heater_reactor",
+            "source": "heater_1",
+            "target": "main_reactor",
+            "type": "mechanical",
+            "port": {
+                "heater_1": "heatchill",
+                "main_reactor": "bind"
+            }
+        }
+    ]
+}

test/experiments/mock_devices/mock_all.json

@@ -3,7 +3,9 @@
         {  
             "id": "MockChiller1",  
             "name": "模拟冷却器",  
-            "children": [],  
+            "children": [
+                "MockContainerForChiller1"
+            ],
             "parent": null,  
             "type": "device",  
             "class": "mock_chiller",  
@@ -25,6 +27,22 @@
                 "purpose": ""
             }  
         },
+        {
+            "id": "MockContainerForChiller1",
+            "name": "模拟容器",
+            "type": "container",
+            "parent": "MockChiller1",
+            "position": {
+                "x": 5,
+                "y": 0,
+                "z": 0
+            },
+            "data": {
+                "liquid_type": "CuCl2",
+                "liquid_volume": "100"
+            },
+            "children": []
+        },
         {  
             "id": "MockFilter1",  
             "name": "模拟过滤器",  

test/experiments/mock_protocol/addteststation.json

@@ -4,58 +4,83 @@
             "id": "AddTestStation",
             "name": "添加试剂测试工作站",
             "children": [
-                "pump_add",
-                "flask_1",
-                "flask_2", 
-                "flask_3",
-                "flask_4",
-                "reactor",
+                "transfer_pump",
+                "multiway_valve", 
                 "stirrer",
-                "flask_air"
+                "flask_reagent1",
+                "flask_reagent2",
+                "flask_reagent3",
+                "flask_reagent4",
+                "reactor",
+                "flask_waste",
+                "flask_rinsing",
+                "flask_buffer"
             ],
             "parent": null,
             "type": "device",
             "class": "workstation",
             "position": {
-                "x": 620.6111111111111,
+                "x": 620,
                 "y": 171,
                 "z": 0
             },
             "config": {
-                "protocol_type": ["AddProtocol", "PumpTransferProtocol", "CleanProtocol"]
+                "protocol_type": ["AddProtocol", "TransferProtocol", "StartStirProtocol", "StopStirProtocol"]
             },
             "data": {}
         },
         {
-            "id": "pump_add",
-            "name": "pump_add",
+            "id": "transfer_pump",
+            "name": "注射器泵",
             "children": [],
             "parent": "AddTestStation",
             "type": "device",
-            "class": "virtual_pump",
+            "class": "virtual_transfer_pump",
             "position": {
-                "x": 520.6111111111111,
+                "x": 520,
                 "y": 300,
                 "z": 0
             },
             "config": {
                 "port": "VIRTUAL",
-                "max_volume": 25.0
+                "max_volume": 50.0,
+                "transfer_rate": 5.0
             },
             "data": {
                 "status": "Idle"
             }
         },
+        {
+            "id": "multiway_valve",
+            "name": "八通阀门",
+            "children": [],
+            "parent": "AddTestStation",
+            "type": "device",
+            "class": "virtual_multiway_valve",
+            "position": {
+                "x": 420,
+                "y": 300,
+                "z": 0
+            },
+            "config": {
+                "port": "VIRTUAL",
+                "positions": 8
+            },
+            "data": {
+                "status": "Idle",
+                "current_position": 1
+            }
+        },
         {
             "id": "stirrer",
-            "name": "stirrer",
+            "name": "搅拌器",
             "children": [],
             "parent": "AddTestStation",
             "type": "device",
             "class": "virtual_stirrer",
             "position": {
-                "x": 698.1111111111111,
-                "y": 478,
+                "x": 720,
+                "y": 450,
                 "z": 0
             },
             "config": {
@@ -68,110 +93,115 @@
             }
         },
         {
-            "id": "flask_1",
-            "name": "通用试剂瓶1",
+            "id": "flask_reagent1",
+            "name": "试剂瓶1 (甲醇)",
             "children": [],
             "parent": "AddTestStation",
             "type": "container",
             "class": null,
             "position": {
                 "x": 100,
-                "y": 428,
+                "y": 400,
                 "z": 0
             },
             "config": {
-                "max_volume": 2000.0
+                "max_volume": 1000.0
             },
             "data": {
-                "liquid": []
+                "liquid": [
+                    {
+                        "name": "甲醇",
+                        "volume": 800.0,
+                        "concentration": "99.9%"
+                    }
+                ]
             }
         },
         {
-            "id": "flask_2",
-            "name": "通用试剂瓶2",
+            "id": "flask_reagent2",
+            "name": "试剂瓶2 (乙醇)",
             "children": [],
             "parent": "AddTestStation",
             "type": "container",
             "class": null,
             "position": {
-                "x": 250,
-                "y": 428,
+                "x": 180,
+                "y": 400,
                 "z": 0
             },
             "config": {
-                "max_volume": 2000.0
+                "max_volume": 1000.0
             },
             "data": {
-                "liquid": []
+                "liquid": [
+                    {
+                        "name": "乙醇",
+                        "volume": 750.0,
+                        "concentration": "95%"
+                    }
+                ]
             }
         },
         {
-            "id": "flask_3",
-            "name": "通用试剂瓶3",
+            "id": "flask_reagent3",
+            "name": "试剂瓶3 (丙酮)",
             "children": [],
             "parent": "AddTestStation",
             "type": "container",
             "class": null,
             "position": {
-                "x": 400,
-                "y": 428,
+                "x": 260,
+                "y": 400,
                 "z": 0
             },
             "config": {
-                "max_volume": 2000.0
+                "max_volume": 1000.0
             },
             "data": {
-                "liquid": []
+                "liquid": [
+                    {
+                        "name": "丙酮",
+                        "volume": 900.0,
+                        "concentration": "99.5%"
+                    }
+                ]
             }
         },
         {
-            "id": "flask_4",
-            "name": "通用试剂瓶4",
+            "id": "flask_reagent4",
+            "name": "试剂瓶4 (二氯甲烷)",
             "children": [],
             "parent": "AddTestStation",
             "type": "container",
             "class": null,
             "position": {
-                "x": 550,
-                "y": 428,
+                "x": 340,
+                "y": 400,
                 "z": 0
             },
             "config": {
-                "max_volume": 2000.0
+                "max_volume": 1000.0
             },
             "data": {
-                "liquid": []
+                "liquid": [
+                    {
+                        "name": "二氯甲烷",
+                        "volume": 850.0,
+                        "concentration": "99.8%"
+                    }
+                ]
             }
         },
         {
             "id": "reactor",
-            "name": "reactor",
+            "name": "反应器",
             "children": [],
             "parent": "AddTestStation",
             "type": "container",
             "class": null,
             "position": {
-                "x": 698.1111111111111,
-                "y": 428,
-                "z": 0
-            },
-            "config": {
-                "max_volume": 5000.0
-            },
-            "data": {
-                "liquid": []
-            }
-        },
-        {
-            "id": "flask_air",
-            "name": "flask_air",
-            "children": [],
-            "parent": "AddTestStation",
-            "type": "container",
-            "class": null,
-            "position": {
-                "x": 800,
-                "y": 300,
+                "x": 720,
+                "y": 400,
                 "z": 0
             },
             "config": {
@@ -180,70 +210,166 @@
             "data": {
                 "liquid": []
             }
+        },
+        {
+            "id": "flask_waste",
+            "name": "废液瓶",
+            "children": [],
+            "parent": "AddTestStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 850,
+                "y": 400,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 3000.0
+            },
+            "data": {
+                "liquid": []
+            }
+        },
+        {
+            "id": "flask_rinsing",
+            "name": "冲洗液瓶",
+            "children": [],
+            "parent": "AddTestStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 950,
+                "y": 300,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 1000.0
+            },
+            "data": {
+                "liquid": [
+                    {
+                        "name": "去离子水",
+                        "volume": 800.0,
+                        "concentration": "纯净"
+                    }
+                ]
+            }
+        },
+        {
+            "id": "flask_buffer",
+            "name": "缓冲液瓶",
+            "children": [],
+            "parent": "AddTestStation",
+            "type": "container",
+            "class": null,
+            "position": {
+                "x": 950,
+                "y": 400,
+                "z": 0
+            },
+            "config": {
+                "max_volume": 1000.0
+            },
+            "data": {
+                "liquid": [
+                    {
+                        "name": "磷酸盐缓冲液",
+                        "volume": 700.0,
+                        "concentration": "0.1M, pH 7.4"
+                    }
+                ]
+            }
         }
     ],
     "links": [
         {
-            "source": "stirrer",
+            "source": "transfer_pump",
+            "target": "multiway_valve",
+            "type": "physical",
+            "port": {
+                "transfer_pump": "syringe-port",
+                "multiway_valve": "multiway-valve-inlet"
+            }
+        },
+        {
+            "source": "multiway_valve",
+            "target": "flask_reagent1",
+            "type": "physical",
+            "port": {
+                "multiway_valve": "multiway-valve-port-1",
+                "flask_reagent1": "top"
+            }
+        },
+        {
+            "source": "multiway_valve",
+            "target": "flask_reagent2",
+            "type": "physical",
+            "port": {
+                "multiway_valve": "multiway-valve-port-2",
+                "flask_reagent2": "top"
+            }
+        },
+        {
+            "source": "multiway_valve",
+            "target": "flask_reagent3",
+            "type": "physical",
+            "port": {
+                "multiway_valve": "multiway-valve-port-3",
+                "flask_reagent3": "top"
+            }
+        },
+        {
+            "source": "multiway_valve",
+            "target": "flask_reagent4",
+            "type": "physical",
+            "port": {
+                "multiway_valve": "multiway-valve-port-4",
+                "flask_reagent4": "top"
+            }
+        },
+        {
+            "source": "multiway_valve",
             "target": "reactor",
             "type": "physical",
             "port": {
-                "stirrer": "top",
-                "reactor": "bottom"
-            }
-        },
-        {
-            "source": "pump_add",
-            "target": "flask_1",
-            "type": "physical",
-            "port": {
-                "pump_add": "outlet",
-                "flask_1": "top"
-            }
-        },
-        {
-            "source": "pump_add",
-            "target": "flask_2",
-            "type": "physical",
-            "port": {
-                "pump_add": "inlet",
-                "flask_2": "top"
-            }
-        },
-        {
-            "source": "pump_add",
-            "target": "flask_3",
-            "type": "physical",
-            "port": {
-                "pump_add": "inlet",
-                "flask_3": "top"
-            }
-        },
-        {
-            "source": "pump_add",
-            "target": "flask_4",
-            "type": "physical",
-            "port": {
-                "pump_add": "inlet",
-                "flask_4": "top"
-            }
-        },
-        {
-            "source": "pump_add",
-            "target": "reactor",
-            "type": "physical",
-            "port": {
-                "pump_add": "outlet",
+                "multiway_valve": "multiway-valve-port-5",
                 "reactor": "top"
             }
         },
         {
-            "source": "pump_add",
-            "target": "flask_air",
+            "source": "multiway_valve",
+            "target": "flask_waste",
             "type": "physical",
             "port": {
-                "pump_add": "inlet",
-                "flask_air": "top"
+                "multiway_valve": "multiway-valve-port-6",
+                "flask_waste": "top"
+            }
+        },
+        {
+            "source": "multiway_valve",
+            "target": "flask_rinsing",
+            "type": "physical",
+            "port": {
+                "multiway_valve": "multiway-valve-port-7",
+                "flask_rinsing": "top"
+            }
+        },
+        {
+            "source": "multiway_valve",
+            "target": "flask_buffer",
+            "type": "physical",
+            "port": {
+                "multiway_valve": "multiway-valve-port-8",
+                "flask_buffer": "top"
+            }
+        },
+        {
+            "source": "stirrer",
+            "target": "reactor",
+            "type": "physical",
+            "port": {
+                "stirrer": "stirrer-vessel",
+                "reactor": "bottom"
             }
         }
     ]

test/experiments/mock_reactor.json

@@ -30,14 +30,17 @@
             "children": [],
             "parent": "ReactorX",
             "type": "container",
-            "class": null,
+            "class": "container",
             "position": {
                 "x": 698.1111111111111,
                 "y": 428,
                 "z": 0
             },
             "config": {
-                "max_volume": 5000.0
+                "max_volume": 5000.0,
+                "size_x": 200.0,
+                "size_y": 200.0,
+                "size_z": 200.0
             },
             "data": {
                 "liquid": [
@@ -71,7 +74,7 @@
             "type": "device",
             "class": "solenoid_valve.mock",
             "position": {
-                "x": 620.6111111111111,
+                "x": 780,
                 "y": 171,
                 "z": 0
             },
@@ -89,7 +92,7 @@
             "type": "device",
             "class": "vacuum_pump.mock",
             "position": {
-                "x": 620.6111111111111,
+                "x": 500,
                 "y": 171,
                 "z": 0
             },
@@ -107,7 +110,7 @@
             "type": "device",
             "class": "gas_source.mock",
             "position": {
-                "x": 620.6111111111111,
+                "x": 900,
                 "y": 171,
                 "z": 0
             },
@@ -119,39 +122,39 @@
     ],
     "links": [
         {
-            "source": "reactor",
-            "target": "vacuum_valve",
-            "type": "physical",
+            "source": "vacuum_valve",
+            "target": "reactor",
+            "type": "fluid",
             "port": {
                 "reactor": "top",
-                "vacuum_valve": "1"
+                "vacuum_valve": "out"
             }
         },
         {
-            "source": "reactor",
-            "target": "gas_valve",
-            "type": "physical",
+            "source": "gas_valve",
+            "target": "reactor",
+            "type": "fluid",
             "port": {
                 "reactor": "top",
-                "gas_valve": "1"
+                "gas_valve": "out"
             }
         },
         {
             "source": "vacuum_pump",
             "target": "vacuum_valve",
-            "type": "physical",
+            "type": "fluid",
             "port": {
                 "vacuum_pump": "out",
-                "vacuum_valve": "0"
+                "vacuum_valve": "in"
             }
         },
         {
             "source": "gas_source",
             "target": "gas_valve",
-            "type": "physical",
+            "type": "fluid",
             "port": {
                 "gas_source": "out",
-                "gas_valve": "0"
+                "gas_valve": "in"
             }
         }
     ]