mirror of
https://github.com/dptech-corp/Uni-Lab-OS.git
synced 2026-02-03 21:05:09 +00:00
Workbench example, adjust log level, and ci check (#220) * TestLatency Return Value Example & gitignore update * Adjust log level & Add workbench virtual example & Add not action decorator & Add check_mode & * Add CI Check Fix/workstation yb revision (#217) * Revert log change & update registry * Revert opcua client & move electrolyte node Workstation yb merge dev ready 260113 (#216) * feat(bioyond): 添加计算实验设计功能,支持化合物配比和滴定比例参数 * feat(bioyond): 添加测量小瓶功能,支持基本参数配置 * feat(bioyond): 添加测量小瓶配置,支持新设备参数 * feat(bioyond): 更新仓库布局和尺寸,支持竖向排列的测量小瓶和试剂存放堆栈 * feat(bioyond): 优化任务创建流程,确保无论成功与否都清理任务队列以避免重复累积 * feat(bioyond): 添加设置反应器温度功能,支持温度范围和异常处理 * feat(bioyond): 调整反应器位置配置,统一坐标格式 * feat(bioyond): 添加调度器启动功能,支持任务队列执行并处理异常 * feat(bioyond): 优化调度器启动功能,添加异常处理并更新相关配置 * feat(opcua): 增强节点ID解析兼容性和数据类型处理 改进节点ID解析逻辑以支持多种格式,包括字符串和数字标识符 添加数据类型转换处理,确保写入值时类型匹配 优化错误提示信息,便于调试节点连接问题 * feat(registry): 新增后处理站的设备配置文件 添加后处理站的YAML配置文件,包含动作映射、状态类型和设备描述 * 添加调度器启动功能,合并物料参数配置,优化物料参数处理逻辑 * 添加从 Bioyond 系统自动同步工作流序列的功能,并更新相关配置 * fix:兼容 BioyondReactionStation 中 workflow_sequence 被重写为 property * fix:同步工作流序列 * feat: remove commented workflow synchronization from `reaction_station.py`. * 添加时间约束功能及相关配置 * fix:自动更新物料缓存功能,添加物料时更新缓存并在删除时移除缓存项 * fix:在添加物料时处理字符串和字典返回值,确保正确更新缓存 * fix:更新奔曜错误处理报送为物料变更报送,调整日志记录和响应消息 * feat:添加实验报告简化功能,去除冗余信息并保留关键信息 * feat: 添加任务状态事件发布功能,监控并报告任务运行、超时、完成和错误状态 * fix: 修复添加物料时数据格式错误 * Refactor bioyond_dispensing_station and reaction_station_bioyond YAML configurations - Removed redundant action value mappings from bioyond_dispensing_station. - Updated goal properties in bioyond_dispensing_station to use enums for target_stack and other parameters. - Changed data types for end_point and start_point in reaction_station_bioyond to use string enums (Start, End). - Simplified descriptions and updated measurement units from μL to mL where applicable. - Removed unused commands from reaction_station_bioyond to streamline the configuration. * fix:Change the material unit from μL to mL * fix:refresh_material_cache * feat: 动态获取工作流步骤ID,优化工作流配置 * feat: 添加清空服务端所有非核心工作流功能 * fix:修复Bottle类的序列化和反序列化方法 * feat:增强材料缓存更新逻辑,支持处理返回数据中的详细信息 * Add debug log * feat(workstation): update bioyond config migration and coin cell material search logic - Migrate bioyond_cell config to JSON structure and remove global variable dependencies - Implement material search confirmation dialog auto-handling - Add documentation: 20260113_物料搜寻确认弹窗自动处理功能.md and 20260113_配置迁移修改总结.md * Refactor module paths for Bioyond devices in YAML configuration files - Updated the module path for BioyondDispensingStation in bioyond_dispensing_station.yaml to reflect the new directory structure. - Updated the module path for BioyondReactionStation and BioyondReactor in reaction_station_bioyond.yaml to align with the revised organization of the codebase. * fix: WareHouse 的不可哈希类型错误,优化父节点去重逻辑 * refactor: Move config from module to instance initialization * fix: 修正 reaction_station 目录名拼写错误 * feat: Integrate material search logic and cleanup deprecated files - Update coin_cell_assembly.py with material search dialog handling - Update YB_warehouses.py with latest warehouse configurations - Remove outdated documentation and test data files * Refactor: Use instance attributes for action names and workflow step IDs * refactor: Split tipbox storage into left and right warehouses * refactor: Merge tipbox storage left and right into single warehouse --------- Co-authored-by: ZiWei <131428629+ZiWei09@users.noreply.github.com> Co-authored-by: Andy6M <xieqiming1132@qq.com> fix: WareHouse 的不可哈希类型错误,优化父节点去重逻辑 fix parent_uuid fetch when bind_parent_id == node_name 物料更新也是用父节点进行报送 Add None conversion for tube rack etc. Add set_liquid example. Add create_resource and test_resource example. Add restart. Temp allow action message. Add no_update_feedback option. Create session_id by edge. bump version to 0.10.15 temp cancel update req
370 lines
17 KiB
YAML
370 lines
17 KiB
YAML
name: Build Conda-Pack Environment
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on:
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workflow_dispatch:
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inputs:
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branch:
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description: '选择要构建的分支'
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required: true
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default: 'dev'
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type: string
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platforms:
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description: '选择构建平台 (逗号分隔): linux-64, osx-64, osx-arm64, win-64'
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required: false
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default: 'win-64'
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type: string
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build_full:
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description: '是否构建完整版 unilabos-full (默认构建轻量版 unilabos)'
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required: false
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default: false
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type: boolean
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jobs:
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build-conda-pack:
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strategy:
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fail-fast: false
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matrix:
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include:
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- os: ubuntu-latest
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platform: linux-64
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env_file: unilabos-linux-64.yaml
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script_ext: sh
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- os: macos-15 # Intel (via Rosetta)
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platform: osx-64
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env_file: unilabos-osx-64.yaml
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script_ext: sh
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- os: macos-latest # ARM64
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platform: osx-arm64
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env_file: unilabos-osx-arm64.yaml
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script_ext: sh
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- os: windows-latest
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platform: win-64
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env_file: unilabos-win64.yaml
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script_ext: bat
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runs-on: ${{ matrix.os }}
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defaults:
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run:
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# Windows uses cmd for better conda/mamba compatibility, Unix uses bash
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shell: ${{ matrix.platform == 'win-64' && 'cmd' || 'bash' }}
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steps:
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- name: Check if platform should be built
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id: should_build
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shell: bash
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run: |
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if [[ -z "${{ github.event.inputs.platforms }}" ]]; then
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echo "should_build=true" >> $GITHUB_OUTPUT
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elif [[ "${{ github.event.inputs.platforms }}" == *"${{ matrix.platform }}"* ]]; then
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echo "should_build=true" >> $GITHUB_OUTPUT
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else
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echo "should_build=false" >> $GITHUB_OUTPUT
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fi
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- uses: actions/checkout@v4
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if: steps.should_build.outputs.should_build == 'true'
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with:
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ref: ${{ github.event.inputs.branch }}
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fetch-depth: 0
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- name: Setup Miniforge (with mamba)
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if: steps.should_build.outputs.should_build == 'true'
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uses: conda-incubator/setup-miniconda@v3
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with:
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miniforge-version: latest
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use-mamba: true
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python-version: '3.11.14'
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channels: conda-forge,robostack-staging,uni-lab,defaults
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channel-priority: flexible
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activate-environment: unilab
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auto-update-conda: false
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show-channel-urls: true
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- name: Install conda-pack, unilabos and dependencies (Windows)
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if: steps.should_build.outputs.should_build == 'true' && matrix.platform == 'win-64'
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run: |
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echo Installing unilabos and dependencies to unilab environment...
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echo Using mamba for faster and more reliable dependency resolution...
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echo Build full: ${{ github.event.inputs.build_full }}
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if "${{ github.event.inputs.build_full }}"=="true" (
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echo Installing unilabos-full ^(complete package^)...
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mamba install -n unilab uni-lab::unilabos-full conda-pack -c uni-lab -c robostack-staging -c conda-forge -y
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) else (
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echo Installing unilabos ^(minimal package^)...
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mamba install -n unilab uni-lab::unilabos conda-pack -c uni-lab -c robostack-staging -c conda-forge -y
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)
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- name: Install conda-pack, unilabos and dependencies (Unix)
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if: steps.should_build.outputs.should_build == 'true' && matrix.platform != 'win-64'
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shell: bash
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run: |
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echo "Installing unilabos and dependencies to unilab environment..."
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echo "Using mamba for faster and more reliable dependency resolution..."
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echo "Build full: ${{ github.event.inputs.build_full }}"
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if [[ "${{ github.event.inputs.build_full }}" == "true" ]]; then
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echo "Installing unilabos-full (complete package)..."
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mamba install -n unilab uni-lab::unilabos-full conda-pack -c uni-lab -c robostack-staging -c conda-forge -y
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else
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echo "Installing unilabos (minimal package)..."
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mamba install -n unilab uni-lab::unilabos conda-pack -c uni-lab -c robostack-staging -c conda-forge -y
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fi
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- name: Get latest ros-humble-unilabos-msgs version (Windows)
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if: steps.should_build.outputs.should_build == 'true' && matrix.platform == 'win-64'
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id: msgs_version_win
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run: |
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echo Checking installed ros-humble-unilabos-msgs version...
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conda list -n unilab ros-humble-unilabos-msgs
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for /f "tokens=2" %%i in ('conda list -n unilab ros-humble-unilabos-msgs --json ^| python -c "import sys, json; pkgs=json.load(sys.stdin); print(pkgs[0]['version'] if pkgs else 'not-found')"') do set VERSION=%%i
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echo installed_version=%VERSION% >> %GITHUB_OUTPUT%
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echo Installed ros-humble-unilabos-msgs version: %VERSION%
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- name: Get latest ros-humble-unilabos-msgs version (Unix)
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if: steps.should_build.outputs.should_build == 'true' && matrix.platform != 'win-64'
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id: msgs_version_unix
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shell: bash
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run: |
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echo "Checking installed ros-humble-unilabos-msgs version..."
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VERSION=$(conda list -n unilab ros-humble-unilabos-msgs --json | python -c "import sys, json; pkgs=json.load(sys.stdin); print(pkgs[0]['version'] if pkgs else 'not-found')")
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echo "installed_version=$VERSION" >> $GITHUB_OUTPUT
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echo "Installed ros-humble-unilabos-msgs version: $VERSION"
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- name: Check for newer ros-humble-unilabos-msgs (Windows)
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if: steps.should_build.outputs.should_build == 'true' && matrix.platform == 'win-64'
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run: |
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echo Checking for available ros-humble-unilabos-msgs versions...
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mamba search ros-humble-unilabos-msgs -c uni-lab -c robostack-staging -c conda-forge || echo Search completed
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echo.
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echo Updating ros-humble-unilabos-msgs to latest version...
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mamba update -n unilab ros-humble-unilabos-msgs -c uni-lab -c robostack-staging -c conda-forge -y || echo Already at latest version
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- name: Check for newer ros-humble-unilabos-msgs (Unix)
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if: steps.should_build.outputs.should_build == 'true' && matrix.platform != 'win-64'
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shell: bash
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run: |
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echo "Checking for available ros-humble-unilabos-msgs versions..."
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mamba search ros-humble-unilabos-msgs -c uni-lab -c robostack-staging -c conda-forge || echo "Search completed"
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echo ""
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echo "Updating ros-humble-unilabos-msgs to latest version..."
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mamba update -n unilab ros-humble-unilabos-msgs -c uni-lab -c robostack-staging -c conda-forge -y || echo "Already at latest version"
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- name: Install latest unilabos from source (Windows)
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if: steps.should_build.outputs.should_build == 'true' && matrix.platform == 'win-64'
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run: |
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echo Uninstalling existing unilabos...
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mamba run -n unilab pip uninstall unilabos -y || echo unilabos not installed via pip
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echo Installing unilabos from source (branch: ${{ github.event.inputs.branch }})...
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mamba run -n unilab pip install .
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echo Verifying installation...
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mamba run -n unilab pip show unilabos
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- name: Install latest unilabos from source (Unix)
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if: steps.should_build.outputs.should_build == 'true' && matrix.platform != 'win-64'
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shell: bash
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run: |
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echo "Uninstalling existing unilabos..."
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mamba run -n unilab pip uninstall unilabos -y || echo "unilabos not installed via pip"
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echo "Installing unilabos from source (branch: ${{ github.event.inputs.branch }})..."
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mamba run -n unilab pip install .
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echo "Verifying installation..."
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mamba run -n unilab pip show unilabos
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- name: Display environment info (Windows)
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if: steps.should_build.outputs.should_build == 'true' && matrix.platform == 'win-64'
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run: |
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echo === Environment Information ===
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mamba env list
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echo.
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echo === Installed Packages ===
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mamba list -n unilab | findstr /C:"unilabos" /C:"ros-humble-unilabos-msgs" || mamba list -n unilab
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echo.
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echo === Python Packages ===
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mamba run -n unilab pip list | findstr unilabos || mamba run -n unilab pip list
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- name: Display environment info (Unix)
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if: steps.should_build.outputs.should_build == 'true' && matrix.platform != 'win-64'
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shell: bash
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run: |
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echo "=== Environment Information ==="
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mamba env list
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echo ""
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echo "=== Installed Packages ==="
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mamba list -n unilab | grep -E "(unilabos|ros-humble-unilabos-msgs)" || mamba list -n unilab
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echo ""
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echo "=== Python Packages ==="
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mamba run -n unilab pip list | grep unilabos || mamba run -n unilab pip list
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- name: Verify environment integrity (Windows)
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if: steps.should_build.outputs.should_build == 'true' && matrix.platform == 'win-64'
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run: |
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echo Verifying Python version...
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mamba run -n unilab python -c "import sys; print(f'Python version: {sys.version}')"
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echo Verifying unilabos import...
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mamba run -n unilab python -c "import unilabos; print(f'UniLabOS version: {unilabos.__version__}')" || echo Warning: Could not import unilabos
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echo Checking critical packages...
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mamba run -n unilab python -c "import rclpy; print('ROS2 rclpy: OK')"
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echo Running comprehensive verification script...
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mamba run -n unilab python scripts\verify_installation.py --auto-install || echo Warning: Verification script reported issues
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echo Environment verification complete!
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- name: Verify environment integrity (Unix)
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if: steps.should_build.outputs.should_build == 'true' && matrix.platform != 'win-64'
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shell: bash
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run: |
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echo "Verifying Python version..."
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mamba run -n unilab python -c "import sys; print(f'Python version: {sys.version}')"
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echo "Verifying unilabos import..."
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mamba run -n unilab python -c "import unilabos; print(f'UniLabOS version: {unilabos.__version__}')" || echo "Warning: Could not import unilabos"
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echo "Checking critical packages..."
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mamba run -n unilab python -c "import rclpy; print('ROS2 rclpy: OK')"
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echo "Running comprehensive verification script..."
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mamba run -n unilab python scripts/verify_installation.py --auto-install || echo "Warning: Verification script reported issues"
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echo "Environment verification complete!"
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- name: Pack conda environment (Windows)
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if: steps.should_build.outputs.should_build == 'true' && matrix.platform == 'win-64'
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run: |
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echo Packing unilab environment with conda-pack...
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mamba activate unilab && conda pack -n unilab -o unilab-env-${{ matrix.platform }}.tar.gz --ignore-missing-files
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echo Pack file created:
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dir unilab-env-${{ matrix.platform }}.tar.gz
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- name: Pack conda environment (Unix)
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if: steps.should_build.outputs.should_build == 'true' && matrix.platform != 'win-64'
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shell: bash
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run: |
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echo "Packing unilab environment with conda-pack..."
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mamba install conda-pack -c conda-forge -y
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conda pack -n unilab -o unilab-env-${{ matrix.platform }}.tar.gz --ignore-missing-files
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echo "Pack file created:"
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ls -lh unilab-env-${{ matrix.platform }}.tar.gz
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- name: Prepare Windows distribution package
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if: steps.should_build.outputs.should_build == 'true' && matrix.platform == 'win-64'
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run: |
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echo ==========================================
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echo Creating distribution package...
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echo Platform: ${{ matrix.platform }}
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echo ==========================================
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mkdir dist-package 2>nul || cd .
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rem Copy packed environment
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echo Adding: unilab-env-${{ matrix.platform }}.tar.gz
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copy unilab-env-${{ matrix.platform }}.tar.gz dist-package\
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rem Copy installation script
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echo Adding: install_unilab.bat
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copy scripts\install_unilab.bat dist-package\
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rem Copy verification script
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echo Adding: verify_installation.py
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copy scripts\verify_installation.py dist-package\
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rem Copy source code repository (including .git)
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echo Adding: Uni-Lab-OS source repository
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robocopy . dist-package\Uni-Lab-OS /E /XD dist-package /NFL /NDL /NJH /NJS /NC /NS || if %ERRORLEVEL% LSS 8 exit /b 0
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rem Create README using Python script
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echo Creating: README.txt
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python scripts\create_readme.py ${{ matrix.platform }} ${{ github.event.inputs.branch }} dist-package\README.txt
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echo.
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echo Distribution package contents:
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dir /b dist-package
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echo.
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- name: Prepare Unix/Linux distribution package
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if: steps.should_build.outputs.should_build == 'true' && matrix.platform != 'win-64'
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shell: bash
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run: |
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echo "=========================================="
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echo "Creating distribution package..."
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echo "Platform: ${{ matrix.platform }}"
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echo "=========================================="
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mkdir -p dist-package
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# Copy packed environment
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echo "Adding: unilab-env-${{ matrix.platform }}.tar.gz"
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cp unilab-env-${{ matrix.platform }}.tar.gz dist-package/
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# Copy installation script
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echo "Adding: install_unilab.sh"
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cp scripts/install_unilab.sh dist-package/
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chmod +x dist-package/install_unilab.sh
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# Copy verification script
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echo "Adding: verify_installation.py"
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cp scripts/verify_installation.py dist-package/
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# Copy source code repository (including .git)
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echo "Adding: Uni-Lab-OS source repository"
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rsync -a --exclude='dist-package' . dist-package/Uni-Lab-OS
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# Create README using Python script
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echo "Creating: README.txt"
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python scripts/create_readme.py ${{ matrix.platform }} ${{ github.event.inputs.branch }} dist-package/README.txt
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echo ""
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echo "Distribution package contents:"
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ls -lh dist-package/
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echo ""
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- name: Upload distribution package
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if: steps.should_build.outputs.should_build == 'true'
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uses: actions/upload-artifact@v4
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with:
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name: unilab-pack-${{ matrix.platform }}-${{ github.event.inputs.branch }}
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path: dist-package/
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retention-days: 90
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if-no-files-found: error
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- name: Display package info (Windows)
|
|
if: steps.should_build.outputs.should_build == 'true' && matrix.platform == 'win-64'
|
|
run: |
|
|
echo ==========================================
|
|
echo Build Summary
|
|
echo ==========================================
|
|
echo Platform: ${{ matrix.platform }}
|
|
echo Branch: ${{ github.event.inputs.branch }}
|
|
echo Python version: 3.11.14
|
|
if "${{ github.event.inputs.build_full }}"=="true" (
|
|
echo Package: unilabos-full ^(complete^)
|
|
) else (
|
|
echo Package: unilabos ^(minimal^)
|
|
)
|
|
echo.
|
|
echo Distribution package contents:
|
|
dir dist-package
|
|
echo.
|
|
echo Artifact name: unilab-pack-${{ matrix.platform }}-${{ github.event.inputs.branch }}
|
|
echo.
|
|
echo After download, extract the ZIP and run:
|
|
echo install_unilab.bat
|
|
echo ==========================================
|
|
|
|
- name: Display package info (Unix)
|
|
if: steps.should_build.outputs.should_build == 'true' && matrix.platform != 'win-64'
|
|
shell: bash
|
|
run: |
|
|
echo "=========================================="
|
|
echo "Build Summary"
|
|
echo "=========================================="
|
|
echo "Platform: ${{ matrix.platform }}"
|
|
echo "Branch: ${{ github.event.inputs.branch }}"
|
|
echo "Python version: 3.11.14"
|
|
if [[ "${{ github.event.inputs.build_full }}" == "true" ]]; then
|
|
echo "Package: unilabos-full (complete)"
|
|
else
|
|
echo "Package: unilabos (minimal)"
|
|
fi
|
|
echo ""
|
|
echo "Distribution package contents:"
|
|
ls -lh dist-package/
|
|
echo ""
|
|
echo "Artifact name: unilab-pack-${{ matrix.platform }}-${{ github.event.inputs.branch }}"
|
|
echo ""
|
|
echo "After download:"
|
|
echo " install_unilab.sh"
|
|
echo "=========================================="
|