mirror of
https://github.com/dptech-corp/Uni-Lab-OS.git
synced 2026-02-04 05:15:10 +00:00
Workbench example, adjust log level, and ci check (#220) * TestLatency Return Value Example & gitignore update * Adjust log level & Add workbench virtual example & Add not action decorator & Add check_mode & * Add CI Check Fix/workstation yb revision (#217) * Revert log change & update registry * Revert opcua client & move electrolyte node Workstation yb merge dev ready 260113 (#216) * feat(bioyond): 添加计算实验设计功能,支持化合物配比和滴定比例参数 * feat(bioyond): 添加测量小瓶功能,支持基本参数配置 * feat(bioyond): 添加测量小瓶配置,支持新设备参数 * feat(bioyond): 更新仓库布局和尺寸,支持竖向排列的测量小瓶和试剂存放堆栈 * feat(bioyond): 优化任务创建流程,确保无论成功与否都清理任务队列以避免重复累积 * feat(bioyond): 添加设置反应器温度功能,支持温度范围和异常处理 * feat(bioyond): 调整反应器位置配置,统一坐标格式 * feat(bioyond): 添加调度器启动功能,支持任务队列执行并处理异常 * feat(bioyond): 优化调度器启动功能,添加异常处理并更新相关配置 * feat(opcua): 增强节点ID解析兼容性和数据类型处理 改进节点ID解析逻辑以支持多种格式,包括字符串和数字标识符 添加数据类型转换处理,确保写入值时类型匹配 优化错误提示信息,便于调试节点连接问题 * feat(registry): 新增后处理站的设备配置文件 添加后处理站的YAML配置文件,包含动作映射、状态类型和设备描述 * 添加调度器启动功能,合并物料参数配置,优化物料参数处理逻辑 * 添加从 Bioyond 系统自动同步工作流序列的功能,并更新相关配置 * fix:兼容 BioyondReactionStation 中 workflow_sequence 被重写为 property * fix:同步工作流序列 * feat: remove commented workflow synchronization from `reaction_station.py`. * 添加时间约束功能及相关配置 * fix:自动更新物料缓存功能,添加物料时更新缓存并在删除时移除缓存项 * fix:在添加物料时处理字符串和字典返回值,确保正确更新缓存 * fix:更新奔曜错误处理报送为物料变更报送,调整日志记录和响应消息 * feat:添加实验报告简化功能,去除冗余信息并保留关键信息 * feat: 添加任务状态事件发布功能,监控并报告任务运行、超时、完成和错误状态 * fix: 修复添加物料时数据格式错误 * Refactor bioyond_dispensing_station and reaction_station_bioyond YAML configurations - Removed redundant action value mappings from bioyond_dispensing_station. - Updated goal properties in bioyond_dispensing_station to use enums for target_stack and other parameters. - Changed data types for end_point and start_point in reaction_station_bioyond to use string enums (Start, End). - Simplified descriptions and updated measurement units from μL to mL where applicable. - Removed unused commands from reaction_station_bioyond to streamline the configuration. * fix:Change the material unit from μL to mL * fix:refresh_material_cache * feat: 动态获取工作流步骤ID,优化工作流配置 * feat: 添加清空服务端所有非核心工作流功能 * fix:修复Bottle类的序列化和反序列化方法 * feat:增强材料缓存更新逻辑,支持处理返回数据中的详细信息 * Add debug log * feat(workstation): update bioyond config migration and coin cell material search logic - Migrate bioyond_cell config to JSON structure and remove global variable dependencies - Implement material search confirmation dialog auto-handling - Add documentation: 20260113_物料搜寻确认弹窗自动处理功能.md and 20260113_配置迁移修改总结.md * Refactor module paths for Bioyond devices in YAML configuration files - Updated the module path for BioyondDispensingStation in bioyond_dispensing_station.yaml to reflect the new directory structure. - Updated the module path for BioyondReactionStation and BioyondReactor in reaction_station_bioyond.yaml to align with the revised organization of the codebase. * fix: WareHouse 的不可哈希类型错误,优化父节点去重逻辑 * refactor: Move config from module to instance initialization * fix: 修正 reaction_station 目录名拼写错误 * feat: Integrate material search logic and cleanup deprecated files - Update coin_cell_assembly.py with material search dialog handling - Update YB_warehouses.py with latest warehouse configurations - Remove outdated documentation and test data files * Refactor: Use instance attributes for action names and workflow step IDs * refactor: Split tipbox storage into left and right warehouses * refactor: Merge tipbox storage left and right into single warehouse --------- Co-authored-by: ZiWei <131428629+ZiWei09@users.noreply.github.com> Co-authored-by: Andy6M <xieqiming1132@qq.com> fix: WareHouse 的不可哈希类型错误,优化父节点去重逻辑 fix parent_uuid fetch when bind_parent_id == node_name 物料更新也是用父节点进行报送 Add None conversion for tube rack etc. Add set_liquid example. Add create_resource and test_resource example. Add restart. Temp allow action message. Add no_update_feedback option. Create session_id by edge. bump version to 0.10.15 temp cancel update req
129 lines
4.3 KiB
YAML
129 lines
4.3 KiB
YAML
name: Deploy Docs
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on:
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# 在 CI Check 成功后自动触发(仅 main 分支)
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workflow_run:
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workflows: ["CI Check"]
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types: [completed]
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branches: [main]
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# 手动触发
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workflow_dispatch:
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inputs:
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branch:
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description: '要部署文档的分支'
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required: false
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default: 'main'
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type: string
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deploy_to_pages:
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description: '是否部署到 GitHub Pages'
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required: false
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default: true
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type: boolean
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# 设置 GITHUB_TOKEN 权限以部署到 GitHub Pages
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permissions:
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contents: read
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pages: write
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id-token: write
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# 只允许一个并发部署,跳过正在进行和最新排队之间的运行
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# 但是不取消正在进行的运行,因为我们希望允许这些生产部署完成
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concurrency:
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group: 'pages'
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cancel-in-progress: false
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jobs:
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# Build documentation
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build:
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# 只在以下情况运行:
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# 1. workflow_run 触发且 CI Check 成功
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# 2. 手动触发
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if: |
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github.event_name == 'workflow_dispatch' ||
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(github.event_name == 'workflow_run' && github.event.workflow_run.conclusion == 'success')
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runs-on: ubuntu-latest
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steps:
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- name: Checkout code
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uses: actions/checkout@v4
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with:
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# workflow_run 时使用触发工作流的分支,手动触发时使用输入的分支
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ref: ${{ github.event.workflow_run.head_branch || github.event.inputs.branch || github.ref }}
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fetch-depth: 0
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- name: Setup Miniforge (with mamba)
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uses: conda-incubator/setup-miniconda@v3
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with:
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miniforge-version: latest
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use-mamba: true
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python-version: '3.11.14'
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channels: conda-forge,robostack-staging,uni-lab,defaults
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channel-priority: flexible
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activate-environment: unilab
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auto-update-conda: false
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show-channel-urls: true
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- name: Install unilabos and dependencies
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run: |
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echo "Installing unilabos and dependencies to unilab environment..."
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echo "Using mamba for faster and more reliable dependency resolution..."
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mamba install -n unilab uni-lab::unilabos -c uni-lab -c robostack-staging -c conda-forge -y
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- name: Install latest unilabos from source
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run: |
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echo "Uninstalling existing unilabos..."
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mamba run -n unilab pip uninstall unilabos -y || echo "unilabos not installed via pip"
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echo "Installing unilabos from source..."
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mamba run -n unilab pip install .
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echo "Verifying installation..."
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mamba run -n unilab pip show unilabos
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- name: Install documentation dependencies
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run: |
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echo "Installing documentation build dependencies..."
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mamba run -n unilab pip install -r docs/requirements.txt
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- name: Setup Pages
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id: pages
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uses: actions/configure-pages@v4
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if: |
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github.event.workflow_run.head_branch == 'main' ||
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(github.event_name == 'workflow_dispatch' && github.event.inputs.deploy_to_pages == 'true')
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- name: Build Sphinx documentation
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run: |
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cd docs
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# Clean previous builds
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rm -rf _build
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# Build HTML documentation in conda environment
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mamba run -n unilab python -m sphinx -b html . _build/html -v
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- name: Check build results
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run: |
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echo "Documentation build completed, checking output directory:"
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ls -la docs/_build/html/
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echo "Checking for index.html:"
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test -f docs/_build/html/index.html && echo "✓ index.html exists" || echo "✗ index.html missing"
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- name: Upload build artifacts
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uses: actions/upload-pages-artifact@v3
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if: |
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github.event.workflow_run.head_branch == 'main' ||
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(github.event_name == 'workflow_dispatch' && github.event.inputs.deploy_to_pages == 'true')
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with:
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path: docs/_build/html
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# Deploy to GitHub Pages
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deploy:
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if: |
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github.event.workflow_run.head_branch == 'main' ||
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(github.event_name == 'workflow_dispatch' && github.event.inputs.deploy_to_pages == 'true')
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environment:
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name: github-pages
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url: ${{ steps.deployment.outputs.page_url }}
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runs-on: ubuntu-latest
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needs: build
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steps:
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- name: Deploy to GitHub Pages
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id: deployment
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uses: actions/deploy-pages@v4
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