Files
Uni-Lab-OS/unilabos/devices/workstation/workstation_base.py
Xuwznln 7c440d10ab Fix/resource UUID and doc fix (#109)
* Fix ResourceTreeSet load error

* Raise error when using unsupported type to create ResourceTreeSet

* Fix children key error

* Fix children key error

* Fix workstation resource not tracking

* Fix workstation deck & children resource dupe

* Fix workstation deck & children resource dupe

* Fix multiple resource error

* Fix resource tree update

* Fix resource tree update

* Force confirm uuid

* Tip more error log

* Refactor Bioyond workstation and experiment workflow (#105)

Refactored the Bioyond workstation classes to improve parameter handling and workflow management. Updated experiment.py to use BioyondReactionStation with deck and material mappings, and enhanced workflow step parameter mapping and execution logic. Adjusted JSON experiment configs, improved workflow sequence handling, and added UUID assignment to PLR materials. Removed unused station_config and material cache logic, and added detailed docstrings and debug output for workflow methods.

* Fix resource get.
Fix resource parent not found.
Mapping uuid for all resources.

* mount parent uuid

* Add logging configuration based on BasicConfig in main function

* fix workstation node error

* fix workstation node error

* Update boot example

* temp fix for resource get

* temp fix for resource get

* provide error info when cant find plr type

* pack repo info

* fix to plr type error

* fix to plr type error

* Update regular container method

* support no size init

* fix comprehensive_station.json

* fix comprehensive_station.json

* fix type conversion

* fix state loading for regular container

* Update deploy-docs.yml

* Update deploy-docs.yml

---------

Co-authored-by: ZiWei <131428629+ZiWei09@users.noreply.github.com>
2025-10-16 17:26:07 +08:00

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"""
工作站基类
Workstation Base Class - 简化版
基于PLR Deck的简化工作站架构
专注于核心物料系统和工作流管理
"""
import collections
import time
from typing import Dict, Any, List, Optional, Union
from abc import ABC, abstractmethod
from dataclasses import dataclass
from enum import Enum
from pylabrobot.resources import Deck, Plate, Resource as PLRResource
from pylabrobot.resources.coordinate import Coordinate
from unilabos.ros.nodes.presets.workstation import ROS2WorkstationNode
from unilabos.utils.log import logger
class WorkflowStatus(Enum):
"""工作流状态"""
IDLE = "idle"
INITIALIZING = "initializing"
RUNNING = "running"
PAUSED = "paused"
STOPPING = "stopping"
STOPPED = "stopped"
ERROR = "error"
COMPLETED = "completed"
@dataclass
class WorkflowInfo:
"""工作流信息"""
name: str
description: str
estimated_duration: float # 预估持续时间(秒)
required_materials: List[str] # 所需物料类型
output_product: str # 输出产品类型
parameters_schema: Dict[str, Any] # 参数架构
class WorkStationContainer(Plate):
"""
WorkStation 专用 Container 类,继承自 Plate和TipRack
注意这个物料必须通过plr_additional_res_reg.py注册到edge才能正常序列化
"""
def __init__(
self,
name: str,
size_x: float,
size_y: float,
size_z: float,
category: str,
ordering: collections.OrderedDict,
model: Optional[str] = None,
):
"""
这里的初始化入参要和plr的保持一致
"""
super().__init__(name, size_x, size_y, size_z, category=category, ordering=ordering, model=model)
self._unilabos_state = {} # 必须有此行,自己的类描述的是物料的
def load_state(self, state: Dict[str, Any]) -> None:
"""从给定的状态加载工作台信息。"""
super().load_state(state)
self._unilabos_state = state
def serialize_state(self) -> Dict[str, Dict[str, Any]]:
data = super().serialize_state()
data.update(
self._unilabos_state
) # Container自身的信息云端物料将保存这一data本地也通过这里的data进行读写当前类用来表示这个物料的长宽高大小的属性而datastate用来表示物料的内容细节等
return data
def get_workstation_plate_resource(name: str) -> PLRResource: # 要给定一个返回plr的方法
"""
用于获取一些模板,例如返回一个带有特定信息/子物料的 Plate这里需要到注册表注册例如unilabos/registry/resources/organic/workstation.yaml
可以直接运行该函数或者利用注册表补全机制,来检查是否资源出错
:param name: 资源名称
:return: Resource对象
"""
plate = WorkStationContainer(
name, size_x=50, size_y=50, size_z=10, category="plate", ordering=collections.OrderedDict()
)
tip_rack = WorkStationContainer(
"tip_rack_inside_plate",
size_x=50,
size_y=50,
size_z=10,
category="tip_rack",
ordering=collections.OrderedDict(),
)
plate.assign_child_resource(tip_rack, Coordinate.zero())
return plate
class ResourceSynchronizer(ABC):
"""资源同步器基类
负责与外部物料系统的同步,并对 self.deck 做修改
"""
def __init__(self, workstation: "WorkstationBase"):
self.workstation = workstation
@abstractmethod
def sync_from_external(self) -> bool:
"""从外部系统同步物料到本地deck"""
pass
@abstractmethod
def sync_to_external(self, plr_resource: PLRResource) -> bool:
"""将本地物料同步到外部系统"""
pass
@abstractmethod
def handle_external_change(self, change_info: Dict[str, Any]) -> bool:
"""处理外部系统的变更通知"""
pass
class WorkstationBase(ABC):
"""工作站基类 - 简化版
核心功能:
1. 基于 PLR Deck 的物料系统,支持格式转换
2. 可选的资源同步器支持外部物料系统
3. 简化的工作流管理
"""
_ros_node: ROS2WorkstationNode
@property
def _children(self) -> Dict[str, Any]: # 不要删除这个下划线,不然会自动导入注册表,后面改成装饰器识别
return self._ros_node.children
async def update_resource_example(self):
return await self._ros_node.update_resource([get_workstation_plate_resource("test")])
def __init__(
self,
deck: Deck,
*args,
**kwargs, # 必须有kwargs
):
# PLR 物料系统
self.deck: Optional[Deck] = deck
self.plr_resources: Dict[str, PLRResource] = {}
self.resource_synchronizer = None # type: Optional[ResourceSynchronizer]
# 硬件接口
self.hardware_interface: Union[Any, str] = None
# 工作流状态
self.current_workflow_status = WorkflowStatus.IDLE
self.current_workflow_info = None
self.workflow_start_time = None
self.workflow_parameters = {}
# 支持的工作流(静态预定义)
self.supported_workflows: Dict[str, WorkflowInfo] = {}
def post_init(self, ros_node: ROS2WorkstationNode) -> None:
# 初始化物料系统
self._ros_node = ros_node
def _build_resource_mappings(self, deck: Deck):
"""递归构建资源映射"""
def add_resource_recursive(resource: PLRResource):
if hasattr(resource, "name"):
self.plr_resources[resource.name] = resource
if hasattr(resource, "children"):
for child in resource.children:
add_resource_recursive(child)
add_resource_recursive(deck)
# ============ 硬件接口管理 ============
def set_hardware_interface(self, hardware_interface: Union[Any, str]):
"""设置硬件接口"""
self.hardware_interface = hardware_interface
logger.info(f"工作站 {self._ros_node.device_id} 硬件接口设置: {type(hardware_interface).__name__}")
def set_workstation_node(self, workstation_node: "ROS2WorkstationNode"):
"""设置协议节点引用(用于代理模式)"""
self._ros_node = workstation_node
logger.info(f"工作站 {self._ros_node.device_id} 关联协议节点")
# ============ 设备操作接口 ============
def call_device_method(self, method: str, *args, **kwargs) -> Any:
"""调用设备方法的统一接口"""
# 1. 代理模式:通过协议节点转发
if isinstance(self.hardware_interface, str) and self.hardware_interface.startswith("proxy:"):
if not self._ros_node:
raise RuntimeError("代理模式需要设置workstation_node")
device_id = self.hardware_interface[6:] # 移除 "proxy:" 前缀
return self._ros_node.call_device_method(device_id, method, *args, **kwargs)
# 2. 直接模式:直接调用硬件接口方法
elif self.hardware_interface and hasattr(self.hardware_interface, method):
return getattr(self.hardware_interface, method)(*args, **kwargs)
else:
raise AttributeError(f"硬件接口不支持方法: {method}")
def get_device_status(self) -> Dict[str, Any]:
"""获取设备状态"""
try:
return self.call_device_method("get_status")
except AttributeError:
# 如果设备不支持get_status方法返回基础状态
return {
"status": "unknown",
"interface_type": type(self.hardware_interface).__name__,
"timestamp": time.time(),
}
def is_device_available(self) -> bool:
"""检查设备是否可用"""
try:
self.get_device_status()
return True
except:
return False
# ============ 物料系统接口 ============
def get_deck(self) -> Deck:
"""获取主 Deck"""
return self.deck
def get_all_resources(self) -> Dict[str, PLRResource]:
"""获取所有 PLR 资源"""
return self.plr_resources.copy()
def find_resource_by_name(self, name: str) -> Optional[PLRResource]:
"""按名称查找资源"""
return self.plr_resources.get(name)
def find_resources_by_type(self, resource_type: type) -> List[PLRResource]:
"""按类型查找资源"""
return [res for res in self.plr_resources.values() if isinstance(res, resource_type)]
def sync_with_external_system(self) -> bool:
"""与外部物料系统同步"""
if not self.resource_synchronizer:
logger.info(f"工作站 {self._ros_node.device_id} 没有配置资源同步器")
return True
try:
success = self.resource_synchronizer.sync_from_external()
if success:
logger.info(f"工作站 {self._ros_node.device_id} 外部同步成功")
else:
logger.warning(f"工作站 {self._ros_node.device_id} 外部同步失败")
return success
except Exception as e:
logger.error(f"工作站 {self._ros_node.device_id} 外部同步异常: {e}")
return False
# ============ 简化的工作流控制 ============
def execute_workflow(self, workflow_name: str, parameters: Dict[str, Any]) -> bool:
"""执行工作流"""
try:
# 设置工作流状态
self.current_workflow_status = WorkflowStatus.INITIALIZING
self.workflow_parameters = parameters
self.workflow_start_time = time.time()
# 委托给子类实现
success = self._execute_workflow_impl(workflow_name, parameters)
if success:
self.current_workflow_status = WorkflowStatus.RUNNING
logger.info(f"工作站 {self._ros_node.device_id} 工作流 {workflow_name} 启动成功")
else:
self.current_workflow_status = WorkflowStatus.ERROR
logger.error(f"工作站 {self._ros_node.device_id} 工作流 {workflow_name} 启动失败")
return success
except Exception as e:
self.current_workflow_status = WorkflowStatus.ERROR
logger.error(f"工作站 {self._ros_node.device_id} 执行工作流失败: {e}")
return False
def stop_workflow(self, emergency: bool = False) -> bool:
"""停止工作流"""
try:
if self.current_workflow_status in [WorkflowStatus.IDLE, WorkflowStatus.STOPPED]:
logger.warning(f"工作站 {self._ros_node.device_id} 没有正在运行的工作流")
return True
self.current_workflow_status = WorkflowStatus.STOPPING
# 委托给子类实现
success = self._stop_workflow_impl(emergency)
if success:
self.current_workflow_status = WorkflowStatus.STOPPED
logger.info(f"工作站 {self._ros_node.device_id} 工作流停止成功 (紧急: {emergency})")
else:
self.current_workflow_status = WorkflowStatus.ERROR
logger.error(f"工作站 {self._ros_node.device_id} 工作流停止失败")
return success
except Exception as e:
self.current_workflow_status = WorkflowStatus.ERROR
logger.error(f"工作站 {self._ros_node.device_id} 停止工作流失败: {e}")
return False
# ============ 状态属性 ============
@property
def workflow_status(self) -> WorkflowStatus:
"""获取当前工作流状态"""
return self.current_workflow_status
@property
def is_busy(self) -> bool:
"""检查工作站是否忙碌"""
return self.current_workflow_status in [
WorkflowStatus.INITIALIZING,
WorkflowStatus.RUNNING,
WorkflowStatus.STOPPING,
]
@property
def workflow_runtime(self) -> float:
"""获取工作流运行时间(秒)"""
if self.workflow_start_time is None:
return 0.0
return time.time() - self.workflow_start_time
class ProtocolNode(WorkstationBase):
def __init__(self, deck: Optional[PLRResource], *args, **kwargs):
super().__init__(deck, *args, **kwargs)