Files
Uni-Lab-OS/unilabos/registry/devices/reaction_station_bioyond.yaml
Xuwznln 9aeffebde1 0.10.7 Update (#101)
* Cleanup registry to be easy-understanding (#76)

* delete deprecated mock devices

* rename categories

* combine chromatographic devices

* rename rviz simulation nodes

* organic virtual devices

* parse vessel_id

* run registry completion before merge

---------

Co-authored-by: Xuwznln <18435084+Xuwznln@users.noreply.github.com>

* fix: workstation handlers and vessel_id parsing

* fix: working dir error when input config path
feat: report publish topic when error

* modify default discovery_interval to 15s

* feat: add trace log level

* feat: 添加ChinWe设备控制类,支持串口通信和电机控制功能 (#79)

* fix: drop_tips not using auto resource select

* fix: discard_tips error

* fix: discard_tips

* fix: prcxi_res

* add: prcxi res
fix: startup slow

* feat: workstation example

* fix pumps and liquid_handler handle

* feat: 优化protocol node节点运行日志

* fix all protocol_compilers and remove deprecated devices

* feat: 新增use_remote_resource参数

* fix and remove redundant info

* bugfixes on organic protocols

* fix filter protocol

* fix protocol node

* 临时兼容错误的driver写法

* fix: prcxi import error

* use call_async in all service to avoid deadlock

* fix: figure_resource

* Update recipe.yaml

* add workstation template and battery example

* feat: add sk & ak

* update workstation base

* Create workstation_architecture.md

* refactor: workstation_base 重构为仅含业务逻辑,通信和子设备管理交给 ProtocolNode

* refactor: ProtocolNode→WorkstationNode

* Add:msgs.action (#83)

* update: Workstation dev 将版本号从 0.10.3 更新为 0.10.4 (#84)

* Add:msgs.action

* update: 将版本号从 0.10.3 更新为 0.10.4

* simplify resource system

* uncompleted refactor

* example for use WorkstationBase

* feat: websocket

* feat: websocket test

* feat: workstation example

* feat: action status

* fix: station自己的方法注册错误

* fix: 还原protocol node处理方法

* fix: build

* fix: missing job_id key

* ws test version 1

* ws test version 2

* ws protocol

* 增加物料关系上传日志

* 增加物料关系上传日志

* 修正物料关系上传

* 修复工站的tracker实例追踪失效问题

* 增加handle检测,增加material edge关系上传

* 修复event loop错误

* 修复edge上报错误

* 修复async错误

* 更新schema的title字段

* 主机节点信息等支持自动刷新

* 注册表编辑器

* 修复status密集发送时,消息出错

* 增加addr参数

* fix: addr param

* fix: addr param

* 取消labid 和 强制config输入

* Add action definitions for LiquidHandlerSetGroup and LiquidHandlerTransferGroup

- Created LiquidHandlerSetGroup.action with fields for group name, wells, and volumes.
- Created LiquidHandlerTransferGroup.action with fields for source and target group names and unit volume.
- Both actions include response fields for return information and success status.

* Add LiquidHandlerSetGroup and LiquidHandlerTransferGroup actions to CMakeLists

* Add set_group and transfer_group methods to PRCXI9300Handler and update liquid_handler.yaml

* result_info改为字典类型

* 新增uat的地址替换

* runze multiple pump support

(cherry picked from commit 49354fcf39)

* remove runze multiple software obtainer

(cherry picked from commit 8bcc92a394)

* support multiple backbone

(cherry picked from commit 4771ff2347)

* Update runze pump format

* Correct runze multiple backbone

* Update runze_multiple_backbone

* Correct runze pump multiple receive method.

* Correct runze pump multiple receive method.

* 对于PRCXI9320的transfer_group,一对多和多对多

* 移除MQTT,更新launch文档,提供注册表示例文件,更新到0.10.5

* fix import error

* fix dupe upload registry

* refactor ws client

* add server timeout

* Fix: run-column with correct vessel id (#86)

* fix run_column

* Update run_column_protocol.py

(cherry picked from commit e5aa4d940a)

* resource_update use resource_add

* 新增版位推荐功能

* 重新规定了版位推荐的入参

* update registry with nested obj

* fix protocol node log_message, added create_resource return value

* fix protocol node log_message, added create_resource return value

* try fix add protocol

* fix resource_add

* 修复移液站错误的aspirate注册表

* Feature/xprbalance-zhida (#80)

* feat(devices): add Zhida GC/MS pretreatment automation workstation

* feat(devices): add mettler_toledo xpr balance

* balance

* 重新补全zhida注册表

* PRCXI9320 json

* PRCXI9320 json

* PRCXI9320 json

* fix resource download

* remove class for resource

* bump version to 0.10.6

* 更新所有注册表

* 修复protocolnode的兼容性

* 修复protocolnode的兼容性

* Update install md

* Add Defaultlayout

* 更新物料接口

* fix dict to tree/nested-dict converter

* coin_cell_station draft

* refactor: rename "station_resource" to "deck"

* add standardized BIOYOND resources: bottle_carrier, bottle

* refactor and add BIOYOND resources tests

* add BIOYOND deck assignment and pass all tests

* fix: update resource with correct structure; remove deprecated liquid_handler set_group action

* feat: 将新威电池测试系统驱动与配置文件并入 workstation_dev_YB2 (#92)

* feat: 新威电池测试系统驱动与注册文件

* feat: bring neware driver & battery.json into workstation_dev_YB2

* add bioyond studio draft

* bioyond station with communication init and resource sync

* fix bioyond station and registry

* fix: update resource with correct structure; remove deprecated liquid_handler set_group action

* frontend_docs

* create/update resources with POST/PUT for big amount/ small amount data

* create/update resources with POST/PUT for big amount/ small amount data

* refactor: add itemized_carrier instead of carrier consists of ResourceHolder

* create warehouse by factory func

* update bioyond launch json

* add child_size for itemized_carrier

* fix bioyond resource io

* Workstation templates: Resources and its CRUD, and workstation tasks (#95)

* coin_cell_station draft

* refactor: rename "station_resource" to "deck"

* add standardized BIOYOND resources: bottle_carrier, bottle

* refactor and add BIOYOND resources tests

* add BIOYOND deck assignment and pass all tests

* fix: update resource with correct structure; remove deprecated liquid_handler set_group action

* feat: 将新威电池测试系统驱动与配置文件并入 workstation_dev_YB2 (#92)

* feat: 新威电池测试系统驱动与注册文件

* feat: bring neware driver & battery.json into workstation_dev_YB2

* add bioyond studio draft

* bioyond station with communication init and resource sync

* fix bioyond station and registry

* create/update resources with POST/PUT for big amount/ small amount data

* refactor: add itemized_carrier instead of carrier consists of ResourceHolder

* create warehouse by factory func

* update bioyond launch json

* add child_size for itemized_carrier

* fix bioyond resource io

---------

Co-authored-by: h840473807 <47357934+h840473807@users.noreply.github.com>
Co-authored-by: Xie Qiming <97236197+Andy6M@users.noreply.github.com>

* 更新物料接口

* Workstation dev yb2 (#100)

* Refactor and extend reaction station action messages

* Refactor dispensing station tasks to enhance parameter clarity and add batch processing capabilities

- Updated `create_90_10_vial_feeding_task` to include detailed parameters for 90%/10% vial feeding, improving clarity and usability.
- Introduced `create_batch_90_10_vial_feeding_task` for batch processing of 90%/10% vial feeding tasks with JSON formatted input.
- Added `create_batch_diamine_solution_task` for batch preparation of diamine solution, also utilizing JSON formatted input.
- Refined `create_diamine_solution_task` to include additional parameters for better task configuration.
- Enhanced schema descriptions and default values for improved user guidance.

* 修复to_plr_resources

* add update remove

* 支持选择器注册表自动生成
支持转运物料

* 修复资源添加

* 修复transfer_resource_to_another生成

* 更新transfer_resource_to_another参数,支持spot入参

* 新增test_resource动作

* fix host_node error

* fix host_node test_resource error

* fix host_node test_resource error

* 过滤本地动作

* 移动内部action以兼容host node

* 修复同步任务报错不显示的bug

* feat: 允许返回非本节点物料,后面可以通过decoration进行区分,就不进行warning了

* update todo

* modify bioyond/plr converter, bioyond resource registry, and tests

* pass the tests

* update todo

* add conda-pack-build.yml

* add auto install script for conda-pack-build.yml

(cherry picked from commit 172599adcf)

* update conda-pack-build.yml

* update conda-pack-build.yml

* update conda-pack-build.yml

* update conda-pack-build.yml

* update conda-pack-build.yml

* Add version in __init__.py
Update conda-pack-build.yml
Add create_zip_archive.py

* Update conda-pack-build.yml

* Update conda-pack-build.yml (with mamba)

* Update conda-pack-build.yml

* Fix FileNotFoundError

* Try fix 'charmap' codec can't encode characters in position 16-23: character maps to <undefined>

* Fix unilabos msgs search error

* Fix environment_check.py

* Update recipe.yaml

* Update registry. Update uuid loop figure method. Update install docs.

* Fix nested conda pack

* Fix one-key installation path error

* Bump version to 0.10.7

* Workshop bj (#99)

* Add LaiYu Liquid device integration and tests

Introduce LaiYu Liquid device implementation, including backend, controllers, drivers, configuration, and resource files. Add hardware connection, tip pickup, and simplified test scripts, as well as experiment and registry configuration for LaiYu Liquid. Documentation and .gitignore for the device are also included.

* feat(LaiYu_Liquid): 重构设备模块结构并添加硬件文档

refactor: 重新组织LaiYu_Liquid模块目录结构
docs: 添加SOPA移液器和步进电机控制指令文档
fix: 修正设备配置中的最大体积默认值
test: 新增工作台配置测试用例
chore: 删除过时的测试脚本和配置文件

* add

* 重构: 将 LaiYu_Liquid.py 重命名为 laiyu_liquid_main.py 并更新所有导入引用

- 使用 git mv 将 LaiYu_Liquid.py 重命名为 laiyu_liquid_main.py
- 更新所有相关文件中的导入引用
- 保持代码功能不变,仅改善命名一致性
- 测试确认所有导入正常工作

* 修复: 在 core/__init__.py 中添加 LaiYuLiquidBackend 导出

- 添加 LaiYuLiquidBackend 到导入列表
- 添加 LaiYuLiquidBackend 到 __all__ 导出列表
- 确保所有主要类都可以正确导入

* 修复大小写文件夹名字

* 电池装配工站二次开发教程(带目录)上传至dev (#94)

* 电池装配工站二次开发教程

* Update intro.md

* 物料教程

* 更新物料教程,json格式注释

* Update prcxi driver & fix transfer_liquid mix_times (#90)

* Update prcxi driver & fix transfer_liquid mix_times

* fix: correct mix_times type

* Update liquid_handler registry

* test: prcxi.py

* Update registry from pr

* fix ony-key script not exist

* clean files

---------

Co-authored-by: Junhan Chang <changjh@dp.tech>
Co-authored-by: ZiWei <131428629+ZiWei09@users.noreply.github.com>
Co-authored-by: Guangxin Zhang <guangxin.zhang.bio@gmail.com>
Co-authored-by: Xie Qiming <97236197+Andy6M@users.noreply.github.com>
Co-authored-by: h840473807 <47357934+h840473807@users.noreply.github.com>
Co-authored-by: LccLink <1951855008@qq.com>
Co-authored-by: lixinyu1011 <61094742+lixinyu1011@users.noreply.github.com>
Co-authored-by: shiyubo0410 <shiyubo@dp.tech>
2025-10-12 23:34:26 +08:00

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reaction_station.bioyond:
category:
- work_station
- reaction_station_bioyond
class:
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title: add_material参数
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type: object
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auto-create_batch_diamine_solution_task:
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auto-delete_material:
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type: UniLabJsonCommand
auto-device_operation:
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- operation
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auto-dispensing_material_inbound:
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title: dispensing_material_inbound参数
type: object
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auto-dispensing_material_outbound:
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title: dispensing_material_outbound参数
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auto-drip_back:
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goal: {}
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temperature: 25.0
time: '0'
torque_variation: '1'
handles: {}
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temperature:
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torque_variation:
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auto-liquid_feeding_beaker:
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volume:
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title: liquid_feeding_beaker参数
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auto-liquid_feeding_solvents:
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volume:
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auto-liquid_feeding_titration:
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titration_type: '1'
torque_variation: '2'
volume: ''
handles: {}
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schema:
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time:
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volume:
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auto-liquid_feeding_vials_non_titration:
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result: {}
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title: liquid_feeding_vials_non_titration参数
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auto-load_bioyond_data_from_file:
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type: UniLabJsonCommand
auto-material_inbound:
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handles: {}
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result: {}
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type: UniLabJsonCommand
auto-material_outbound:
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handles: {}
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result: {}
required:
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title: material_outbound参数
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type: UniLabJsonCommand
auto-merge_workflow_with_parameters:
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auto-order_query:
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auto-reactor_taken_in:
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title: reactor_taken_in参数
type: object
type: UniLabJsonCommand
auto-reactor_taken_out:
feedback: {}
goal: {}
goal_default:
order_id: ''
preintake_id: ''
handles: {}
placeholder_keys: {}
result: {}
schema:
description: ''
properties:
feedback: {}
goal:
properties:
order_id:
default: ''
type: string
preintake_id:
default: ''
type: string
required: []
type: object
result: {}
required:
- goal
title: reactor_taken_out参数
type: object
type: UniLabJsonCommand
auto-reset_workstation:
feedback: {}
goal: {}
goal_default: {}
handles: {}
placeholder_keys: {}
result: {}
schema:
description: ''
properties:
feedback: {}
goal:
properties: {}
required: []
type: object
result: {}
required:
- goal
title: reset_workstation参数
type: object
type: UniLabJsonCommand
auto-sample_waste_removal:
feedback: {}
goal: {}
goal_default:
waste_data: null
handles: {}
placeholder_keys: {}
result: {}
schema:
description: ''
properties:
feedback: {}
goal:
properties:
waste_data:
type: string
required:
- waste_data
type: object
result: {}
required:
- goal
title: sample_waste_removal参数
type: object
type: UniLabJsonCommand
auto-solid_feeding_vials:
feedback: {}
goal: {}
goal_default:
material_name: ''
volume: ''
handles: {}
placeholder_keys: {}
result: {}
schema:
description: ''
properties:
feedback: {}
goal:
properties:
material_name:
default: ''
type: string
volume:
default: ''
type: string
required: []
type: object
result: {}
required:
- goal
title: solid_feeding_vials参数
type: object
type: UniLabJsonCommand
auto-start_scheduler:
feedback: {}
goal: {}
goal_default: {}
handles: {}
placeholder_keys: {}
result: {}
schema:
description: ''
properties:
feedback: {}
goal:
properties: {}
required: []
type: object
result: {}
required:
- goal
title: start_scheduler参数
type: object
type: UniLabJsonCommand
auto-stock_material:
feedback: {}
goal: {}
goal_default:
location: null
material_id: null
quantity: null
handles: {}
placeholder_keys: {}
result: {}
schema:
description: ''
properties:
feedback: {}
goal:
properties:
location:
type: string
material_id:
type: string
quantity:
type: integer
required:
- material_id
- location
- quantity
type: object
result: {}
required:
- goal
title: stock_material参数
type: object
type: UniLabJsonCommand
auto-stop_scheduler:
feedback: {}
goal: {}
goal_default: {}
handles: {}
placeholder_keys: {}
result: {}
schema:
description: ''
properties:
feedback: {}
goal:
properties: {}
required: []
type: object
result: {}
required:
- goal
title: stop_scheduler参数
type: object
type: UniLabJsonCommand
auto-transfer_resource_to_another:
feedback: {}
goal: {}
goal_default:
mount_device_id: null
mount_resource: null
resource: null
sites: null
handles: {}
placeholder_keys:
mount_device_id: unilabos_devices
mount_resource: unilabos_resources
resource: unilabos_resources
result: {}
schema:
description: ''
properties:
feedback: {}
goal:
properties:
mount_device_id:
type: object
mount_resource:
items:
properties:
category:
type: string
children:
items:
type: string
type: array
config:
type: string
data:
type: string
id:
type: string
name:
type: string
parent:
type: string
pose:
properties:
orientation:
properties:
w:
type: number
x:
type: number
y:
type: number
z:
type: number
required:
- x
- y
- z
- w
title: orientation
type: object
position:
properties:
x:
type: number
y:
type: number
z:
type: number
required:
- x
- y
- z
title: position
type: object
required:
- position
- orientation
title: pose
type: object
sample_id:
type: string
type:
type: string
required:
- id
- name
- sample_id
- children
- parent
- type
- category
- pose
- config
- data
title: mount_resource
type: object
type: array
resource:
items:
properties:
category:
type: string
children:
items:
type: string
type: array
config:
type: string
data:
type: string
id:
type: string
name:
type: string
parent:
type: string
pose:
properties:
orientation:
properties:
w:
type: number
x:
type: number
y:
type: number
z:
type: number
required:
- x
- y
- z
- w
title: orientation
type: object
position:
properties:
x:
type: number
y:
type: number
z:
type: number
required:
- x
- y
- z
title: position
type: object
required:
- position
- orientation
title: pose
type: object
sample_id:
type: string
type:
type: string
required:
- id
- name
- sample_id
- children
- parent
- type
- category
- pose
- config
- data
title: resource
type: object
type: array
sites:
items:
type: string
type: array
required:
- resource
- mount_resource
- sites
- mount_device_id
type: object
result: {}
required:
- goal
title: transfer_resource_to_another参数
type: object
type: UniLabJsonCommand
auto-validate_workflow_parameters:
feedback: {}
goal: {}
goal_default:
workflows: null
handles: {}
placeholder_keys: {}
result: {}
schema:
description: ''
properties:
feedback: {}
goal:
properties:
workflows:
items:
type: object
type: array
required:
- workflows
type: object
result: {}
required:
- goal
title: validate_workflow_parameters参数
type: object
type: UniLabJsonCommand
bioyond_sync:
feedback: {}
goal:
force_sync: force_sync
sync_type: sync_type
goal_default:
force_sync: false
sync_type: full
handles: {}
result: {}
schema:
description: 从Bioyond系统同步物料
properties:
feedback: {}
goal:
properties:
force_sync:
description: 是否强制同步
type: boolean
sync_type:
description: 同步类型
enum:
- full
- incremental
type: string
required:
- sync_type
type: object
result: {}
required:
- goal
title: bioyond_sync参数
type: object
type: UniLabJsonCommand
bioyond_update:
feedback: {}
goal:
material_ids: material_ids
sync_all: sync_all
goal_default:
material_ids: []
sync_all: true
handles: {}
result: {}
schema:
description: 将本地物料变更同步到Bioyond
properties:
feedback: {}
goal:
properties:
material_ids:
description: 要同步的物料ID列表
items:
type: string
type: array
sync_all:
description: 是否同步所有物料
type: boolean
required:
- sync_all
type: object
result: {}
required:
- goal
title: bioyond_update参数
type: object
type: UniLabJsonCommand
reaction_station_drip_back:
feedback: {}
goal:
assign_material_name: assign_material_name
time: time
torque_variation: torque_variation
volume: volume
goal_default:
assign_material_name: ''
time: ''
torque_variation: ''
volume: ''
handles: {}
result: {}
schema:
description: 反应站滴回操作
properties:
feedback: {}
goal:
properties:
assign_material_name:
description: 溶剂名称
type: string
time:
description: 观察时间单位min
type: string
torque_variation:
description: 是否观察1否2是
type: string
volume:
description: 投料体积
type: string
required:
- volume
- assign_material_name
- time
- torque_variation
type: object
result: {}
required:
- goal
title: reaction_station_drip_back参数
type: object
type: UniLabJsonCommand
reaction_station_liquid_feed:
feedback: {}
goal:
assign_material_name: assign_material_name
time: time
titration_type: titration_type
torque_variation: torque_variation
volume: volume
goal_default:
assign_material_name: ''
time: ''
titration_type: ''
torque_variation: ''
volume: ''
handles: {}
result: {}
schema:
description: 反应站液体进料操作
properties:
feedback: {}
goal:
properties:
assign_material_name:
description: 溶剂名称
type: string
time:
description: 观察时间单位min
type: string
titration_type:
description: 滴定类型1否2是
type: string
torque_variation:
description: 是否观察1否2是
type: string
volume:
description: 投料体积
type: string
required:
- titration_type
- volume
- assign_material_name
- time
- torque_variation
type: object
result: {}
required:
- goal
title: reaction_station_liquid_feed参数
type: object
type: UniLabJsonCommand
reaction_station_process_execute:
feedback: {}
goal:
task_name: task_name
workflow_name: workflow_name
goal_default:
task_name: ''
workflow_name: ''
handles: {}
result: {}
schema:
description: 反应站流程执行
properties:
feedback: {}
goal:
properties:
task_name:
description: 任务名称
type: string
workflow_name:
description: 工作流名称
type: string
required:
- workflow_name
- task_name
type: object
result: {}
required:
- goal
title: reaction_station_process_execute参数
type: object
type: UniLabJsonCommand
reaction_station_reactor_taken_out:
feedback: {}
goal:
order_id: order_id
preintake_id: preintake_id
goal_default:
order_id: ''
preintake_id: ''
handles: {}
result: {}
schema:
description: 反应站反应器取出操作 - 通过订单ID和预取样ID进行精确控制
properties:
feedback: {}
goal:
properties:
order_id:
description: 订单ID用于标识要取出的订单
type: string
preintake_id:
description: 预取样ID用于标识具体的取样任务
type: string
required: []
type: object
result:
properties:
code:
description: 操作结果代码1表示成功0表示失败
type: integer
return_info:
description: 操作结果详细信息
type: string
type: object
required:
- goal
title: reaction_station_reactor_taken_out参数
type: object
type: UniLabJsonCommand
reaction_station_solid_feed_vial:
feedback: {}
goal:
assign_material_name: assign_material_name
material_id: material_id
time: time
torque_variation: torque_variation
goal_default:
assign_material_name: ''
material_id: ''
time: ''
torque_variation: ''
handles: {}
result: {}
schema:
description: 反应站固体进料操作
properties:
feedback: {}
goal:
properties:
assign_material_name:
description: 固体名称_粉末加样模块-投料
type: string
material_id:
description: 固体投料类型_粉末加样模块-投料
type: string
time:
description: 观察时间_反应模块-观察搅拌结果
type: string
torque_variation:
description: 是否观察1否2是_反应模块-观察搅拌结果
type: string
required:
- assign_material_name
- material_id
- time
- torque_variation
type: object
result: {}
required:
- goal
title: reaction_station_solid_feed_vial参数
type: object
type: UniLabJsonCommand
reaction_station_take_in:
feedback: {}
goal:
assign_material_name: assign_material_name
cutoff: cutoff
temperature: temperature
goal_default:
assign_material_name: ''
cutoff: ''
temperature: ''
handles: {}
result: {}
schema:
description: 反应站取入操作
properties:
feedback: {}
goal:
properties:
assign_material_name:
description: 物料名称
type: string
cutoff:
description: 截止参数
type: string
temperature:
description: 温度
type: string
required:
- cutoff
- temperature
- assign_material_name
type: object
result: {}
required:
- goal
title: reaction_station_take_in参数
type: object
type: UniLabJsonCommand
module: unilabos.devices.workstation.bioyond_studio.station:BioyondWorkstation
protocol_type: []
status_types:
bioyond_status: dict
device_list: dict
scheduler_status: dict
station_info: dict
workflow_parameter_template: dict
workstation_status: dict
type: python
config_info: []
description: Bioyond反应站 - 专门用于化学反应操作的工作站
handles: []
icon: 反应站.webp
init_param_schema:
config:
properties:
bioyond_config:
type: string
deck:
type: string
station_config:
type: string
required: []
type: object
data:
properties:
bioyond_status:
type: object
device_list:
type: object
scheduler_status:
type: object
station_info:
type: object
workflow_parameter_template:
type: object
workstation_status:
type: object
required:
- station_info
- bioyond_status
- workflow_parameter_template
- scheduler_status
- device_list
- workstation_status
type: object
version: 1.0.0