Files
Uni-Lab-OS/unilabos/app/utils.py
Xuwznln 2a5ddd611d Upgrade to py 3.11.14; ROS2 Humble 0.7; unilabos 0.10.16
Workbench example, adjust log level, and ci check (#220)

* TestLatency Return Value Example & gitignore update

* Adjust log level & Add workbench virtual example & Add not action decorator & Add check_mode &

* Add CI Check

Fix/workstation yb revision (#217)

* Revert log change & update registry

* Revert opcua client & move electrolyte node

Workstation yb merge dev ready 260113 (#216)

* feat(bioyond): 添加计算实验设计功能,支持化合物配比和滴定比例参数

* feat(bioyond): 添加测量小瓶功能,支持基本参数配置

* feat(bioyond): 添加测量小瓶配置,支持新设备参数

* feat(bioyond): 更新仓库布局和尺寸,支持竖向排列的测量小瓶和试剂存放堆栈

* feat(bioyond): 优化任务创建流程,确保无论成功与否都清理任务队列以避免重复累积

* feat(bioyond): 添加设置反应器温度功能,支持温度范围和异常处理

* feat(bioyond): 调整反应器位置配置,统一坐标格式

* feat(bioyond): 添加调度器启动功能,支持任务队列执行并处理异常

* feat(bioyond): 优化调度器启动功能,添加异常处理并更新相关配置

* feat(opcua): 增强节点ID解析兼容性和数据类型处理

改进节点ID解析逻辑以支持多种格式,包括字符串和数字标识符
添加数据类型转换处理,确保写入值时类型匹配
优化错误提示信息,便于调试节点连接问题

* feat(registry): 新增后处理站的设备配置文件

添加后处理站的YAML配置文件,包含动作映射、状态类型和设备描述

* 添加调度器启动功能,合并物料参数配置,优化物料参数处理逻辑

* 添加从 Bioyond 系统自动同步工作流序列的功能,并更新相关配置

* fix:兼容 BioyondReactionStation 中 workflow_sequence 被重写为 property

* fix:同步工作流序列

* feat: remove commented workflow synchronization from `reaction_station.py`.

* 添加时间约束功能及相关配置

* fix:自动更新物料缓存功能,添加物料时更新缓存并在删除时移除缓存项

* fix:在添加物料时处理字符串和字典返回值,确保正确更新缓存

* fix:更新奔曜错误处理报送为物料变更报送,调整日志记录和响应消息

* feat:添加实验报告简化功能,去除冗余信息并保留关键信息

* feat: 添加任务状态事件发布功能,监控并报告任务运行、超时、完成和错误状态

* fix: 修复添加物料时数据格式错误

* Refactor bioyond_dispensing_station and reaction_station_bioyond YAML configurations

- Removed redundant action value mappings from bioyond_dispensing_station.
- Updated goal properties in bioyond_dispensing_station to use enums for target_stack and other parameters.
- Changed data types for end_point and start_point in reaction_station_bioyond to use string enums (Start, End).
- Simplified descriptions and updated measurement units from μL to mL where applicable.
- Removed unused commands from reaction_station_bioyond to streamline the configuration.

* fix:Change the material unit from μL to mL

* fix:refresh_material_cache

* feat: 动态获取工作流步骤ID,优化工作流配置

* feat: 添加清空服务端所有非核心工作流功能

* fix:修复Bottle类的序列化和反序列化方法

* feat:增强材料缓存更新逻辑,支持处理返回数据中的详细信息

* Add debug log

* feat(workstation): update bioyond config migration and coin cell material search logic

- Migrate bioyond_cell config to JSON structure and remove global variable dependencies
- Implement material search confirmation dialog auto-handling
- Add documentation: 20260113_物料搜寻确认弹窗自动处理功能.md and 20260113_配置迁移修改总结.md

* Refactor module paths for Bioyond devices in YAML configuration files

- Updated the module path for BioyondDispensingStation in bioyond_dispensing_station.yaml to reflect the new directory structure.
- Updated the module path for BioyondReactionStation and BioyondReactor in reaction_station_bioyond.yaml to align with the revised organization of the codebase.

* fix: WareHouse 的不可哈希类型错误,优化父节点去重逻辑

* refactor: Move config from module to instance initialization

* fix: 修正 reaction_station 目录名拼写错误

* feat: Integrate material search logic and cleanup deprecated files

- Update coin_cell_assembly.py with material search dialog handling
- Update YB_warehouses.py with latest warehouse configurations
- Remove outdated documentation and test data files

* Refactor: Use instance attributes for action names and workflow step IDs

* refactor: Split tipbox storage into left and right warehouses

* refactor: Merge tipbox storage left and right into single warehouse

---------

Co-authored-by: ZiWei <131428629+ZiWei09@users.noreply.github.com>
Co-authored-by: Andy6M <xieqiming1132@qq.com>

fix: WareHouse 的不可哈希类型错误,优化父节点去重逻辑

fix parent_uuid fetch when bind_parent_id == node_name

物料更新也是用父节点进行报送

Add None conversion for tube rack etc.

Add set_liquid example.

Add create_resource and test_resource example.

Add restart.
Temp allow action message.

Add no_update_feedback option.

Create session_id by edge.

bump version to 0.10.15

temp cancel update req
2026-01-27 15:21:55 +08:00

177 lines
6.7 KiB
Python

"""
UniLabOS 应用工具函数
提供清理、重启等工具函数
"""
import glob
import os
import shutil
import sys
def patch_rclpy_dll_windows():
"""在 Windows + conda 环境下为 rclpy 打 DLL 加载补丁"""
if sys.platform != "win32" or not os.environ.get("CONDA_PREFIX"):
return
try:
import rclpy
return
except ImportError as e:
if not str(e).startswith("DLL load failed"):
return
cp = os.environ["CONDA_PREFIX"]
impl = os.path.join(cp, "Lib", "site-packages", "rclpy", "impl", "implementation_singleton.py")
pyd = glob.glob(os.path.join(cp, "Lib", "site-packages", "rclpy", "_rclpy_pybind11*.pyd"))
if not os.path.exists(impl) or not pyd:
return
with open(impl, "r", encoding="utf-8") as f:
content = f.read()
lib_bin = os.path.join(cp, "Library", "bin").replace("\\", "/")
patch = f'# UniLabOS DLL Patch\nimport os,ctypes\nos.add_dll_directory("{lib_bin}") if hasattr(os,"add_dll_directory") else None\ntry: ctypes.CDLL("{pyd[0].replace(chr(92),"/")}")\nexcept: pass\n# End Patch\n'
shutil.copy2(impl, impl + ".bak")
with open(impl, "w", encoding="utf-8") as f:
f.write(patch + content)
patch_rclpy_dll_windows()
import gc
import threading
import time
from unilabos.utils.banner_print import print_status
def cleanup_for_restart() -> bool:
"""
Clean up all resources for restart without exiting the process.
This function prepares the system for re-initialization by:
1. Stopping all communication clients
2. Destroying ROS nodes
3. Resetting singletons
4. Waiting for threads to finish
Returns:
bool: True if cleanup was successful, False otherwise
"""
print_status("[Restart] Starting cleanup for restart...", "info")
# Step 1: Stop WebSocket communication client
print_status("[Restart] Step 1: Stopping WebSocket client...", "info")
try:
from unilabos.app.communication import get_communication_client
comm_client = get_communication_client()
if comm_client is not None:
comm_client.stop()
print_status("[Restart] WebSocket client stopped", "info")
except Exception as e:
print_status(f"[Restart] Error stopping WebSocket: {e}", "warning")
# Step 2: Get HostNode and cleanup ROS
print_status("[Restart] Step 2: Cleaning up ROS nodes...", "info")
try:
from unilabos.ros.nodes.presets.host_node import HostNode
import rclpy
from rclpy.timer import Timer
host_instance = HostNode.get_instance(timeout=5)
if host_instance is not None:
print_status(f"[Restart] Found HostNode: {host_instance.device_id}", "info")
# Gracefully shutdown background threads
print_status("[Restart] Shutting down background threads...", "info")
HostNode.shutdown_background_threads(timeout=5.0)
print_status("[Restart] Background threads shutdown complete", "info")
# Stop discovery timer
if hasattr(host_instance, "_discovery_timer") and isinstance(host_instance._discovery_timer, Timer):
host_instance._discovery_timer.cancel()
print_status("[Restart] Discovery timer cancelled", "info")
# Destroy device nodes
device_count = len(host_instance.devices_instances)
print_status(f"[Restart] Destroying {device_count} device instances...", "info")
for device_id, device_node in list(host_instance.devices_instances.items()):
try:
if hasattr(device_node, "ros_node_instance") and device_node.ros_node_instance is not None:
device_node.ros_node_instance.destroy_node()
print_status(f"[Restart] Device {device_id} destroyed", "info")
except Exception as e:
print_status(f"[Restart] Error destroying device {device_id}: {e}", "warning")
# Clear devices instances
host_instance.devices_instances.clear()
host_instance.devices_names.clear()
# Destroy host node
try:
host_instance.destroy_node()
print_status("[Restart] HostNode destroyed", "info")
except Exception as e:
print_status(f"[Restart] Error destroying HostNode: {e}", "warning")
# Reset HostNode state
HostNode.reset_state()
print_status("[Restart] HostNode state reset", "info")
# Shutdown executor first (to stop executor.spin() gracefully)
if hasattr(rclpy, "__executor") and rclpy.__executor is not None:
try:
rclpy.__executor.shutdown()
rclpy.__executor = None # Clear for restart
print_status("[Restart] ROS executor shutdown complete", "info")
except Exception as e:
print_status(f"[Restart] Error shutting down executor: {e}", "warning")
# Shutdown rclpy
if rclpy.ok():
rclpy.shutdown()
print_status("[Restart] rclpy shutdown complete", "info")
except ImportError as e:
print_status(f"[Restart] ROS modules not available: {e}", "warning")
except Exception as e:
print_status(f"[Restart] Error in ROS cleanup: {e}", "warning")
return False
# Step 3: Reset communication client singleton
print_status("[Restart] Step 3: Resetting singletons...", "info")
try:
from unilabos.app import communication
if hasattr(communication, "_communication_client"):
communication._communication_client = None
print_status("[Restart] Communication client singleton reset", "info")
except Exception as e:
print_status(f"[Restart] Error resetting communication singleton: {e}", "warning")
# Step 4: Wait for threads to finish
print_status("[Restart] Step 4: Waiting for threads to finish...", "info")
time.sleep(3) # Give threads time to finish
# Check remaining threads
remaining_threads = []
for t in threading.enumerate():
if t.name != "MainThread" and t.is_alive():
remaining_threads.append(t.name)
if remaining_threads:
print_status(
f"[Restart] Warning: {len(remaining_threads)} threads still running: {remaining_threads}", "warning"
)
else:
print_status("[Restart] All threads stopped", "info")
# Step 5: Force garbage collection
print_status("[Restart] Step 5: Running garbage collection...", "info")
gc.collect()
gc.collect() # Run twice for weak references
print_status("[Restart] Garbage collection complete", "info")
print_status("[Restart] Cleanup complete. Ready for re-initialization.", "info")
return True