Files
Uni-Lab-OS/unilabos/app/main.py
Xuwznln 729a0fcf0c 37-biomek-i5i7 (#40)
* add biomek.py demo implementation

* 更新LiquidHandlerBiomek类,添加资源创建功能,优化协议创建方法,修复部分代码格式问题,更新YAML配置以支持新功能。

* Test

* fix biomek success type

* Convert LH action to biomek.

* Update biomek.py

* 注册表上报handle和schema (param input)

* 修复biomek缺少的字段

* delete 's'

* Remove warnings

* Update biomek.py

* Biomek test

* Update biomek.py

* 新增transfer_biomek的msg

* New transfer_biomek

* Updated transfer_biomek

* 更新transfer_biomek的msg

* 更新transfer_biomek的msg

* 支持Biomek创建

* new action

* fix key name typo

* New parameter for biomek to run.

* Refine

* Update

* new actions

* new actions

* 1

* registry

* fix biomek startup
add action handles

* fix handles not as default entry

* biomek_test.py

biomek_test.py是最新的版本,运行它会生成complete_biomek_protocol.json

* Update biomek.py

* biomek_test.py

* fix liquid_handler.biomek handles

* host node新增resource add时间统计
create_resource新增handle
bump version to 0.9.2

* 修正物料上传时间
改用biomek_test
增加ResultInfoEncoder
支持返回结果上传

* 正确发送return_info结果

* 同步执行状态信息

* 取消raiseValueError提示

* Update biomek_test.py

* 0608 DONE

* 同步了Biomek.py 现在应可用

* biomek switch back to non-test

* temp disable initialize resource

* Refine biomek

* Refine copy issue

* Refine

---------

Co-authored-by: Junhan Chang <changjh@pku.edu.cn>
Co-authored-by: Guangxin Zhang <guangxin.zhang.bio@gmail.com>
Co-authored-by: qxw138 <qxw@stu.pku.edu.cn>
2025-06-09 16:57:42 +08:00

214 lines
7.9 KiB
Python
Raw Blame History

This file contains ambiguous Unicode characters

This file contains Unicode characters that might be confused with other characters. If you think that this is intentional, you can safely ignore this warning. Use the Escape button to reveal them.

import argparse
import asyncio
import json
import os
import signal
import sys
import threading
import time
from copy import deepcopy
import yaml
from unilabos.resources.graphio import tree_to_list
# 首先添加项目根目录到路径
current_dir = os.path.dirname(os.path.abspath(__file__))
unilabos_dir = os.path.dirname(os.path.dirname(current_dir))
if unilabos_dir not in sys.path:
sys.path.append(unilabos_dir)
from unilabos.config.config import load_config, BasicConfig, _update_config_from_env
from unilabos.utils.banner_print import print_status, print_unilab_banner
def parse_args():
"""解析命令行参数"""
parser = argparse.ArgumentParser(description="Start Uni-Lab Edge server.")
parser.add_argument("-g", "--graph", help="Physical setup graph.")
parser.add_argument("-d", "--devices", help="Devices config file.")
parser.add_argument("-r", "--resources", help="Resources config file.")
parser.add_argument("-c", "--controllers", default=None, help="Controllers config file.")
parser.add_argument(
"--registry_path",
type=str,
default=None,
action="append",
help="Path to the registry",
)
parser.add_argument(
"--backend",
choices=["ros", "simple", "automancer"],
default="ros",
help="Choose the backend to run with: 'ros', 'simple', or 'automancer'.",
)
parser.add_argument(
"--app_bridges",
nargs="+",
default=["mqtt", "fastapi"],
help="Bridges to connect to. Now support 'mqtt' and 'fastapi'.",
)
parser.add_argument(
"--without_host",
action="store_true",
help="Run the backend as slave (without host).",
)
parser.add_argument(
"--slave_no_host",
action="store_true",
help="Slave模式下跳过等待host服务",
)
parser.add_argument(
"--config",
type=str,
default=None,
help="配置文件路径,支持.py格式的Python配置文件",
)
parser.add_argument(
"--port",
type=int,
default=8002,
help="信息页web服务的启动端口",
)
parser.add_argument(
"--disable_browser",
action='store_true',
help="是否在启动时关闭信息页",
)
parser.add_argument(
"--2d_vis",
action='store_true',
help="是否在pylabrobot实例启动时同时启动可视化",
)
parser.add_argument(
"--visual",
choices=["rviz", "web", "disable"],
default="disable",
help="选择可视化工具: rviz, web",
)
return parser.parse_args()
def main():
"""主函数"""
# 解析命令行参数
args = parse_args()
args_dict = vars(args)
# 加载配置文件优先加载config然后从env读取
config_path = args_dict.get("config")
if config_path is None:
config_path = os.environ.get("UNILABOS.BASICCONFIG.CONFIG_PATH", None)
if config_path:
if not os.path.exists(config_path):
print_status(f"配置文件 {config_path} 不存在", "error")
elif not config_path.endswith(".py"):
print_status(f"配置文件 {config_path} 不是Python文件必须以.py结尾", "error")
else:
load_config(config_path)
else:
print_status(f"启动 UniLab-OS时配置文件参数未正确传入 --config '{config_path}' 尝试本地配置...", "warning")
load_config(config_path)
# 设置BasicConfig参数
BasicConfig.is_host_mode = not args_dict.get("without_host", False)
BasicConfig.slave_no_host = args_dict.get("slave_no_host", False)
machine_name = os.popen("hostname").read().strip()
machine_name = "".join([c if c.isalnum() or c == "_" else "_" for c in machine_name])
BasicConfig.machine_name = machine_name
BasicConfig.vis_2d_enable = args_dict["2d_vis"]
from unilabos.resources.graphio import (
read_node_link_json,
read_graphml,
dict_from_graph,
dict_to_nested_dict,
initialize_resources,
)
from unilabos.app.mq import mqtt_client
from unilabos.registry.registry import build_registry
from unilabos.app.backend import start_backend
from unilabos.app.web import http_client
from unilabos.app.web import start_server
# 显示启动横幅
print_unilab_banner(args_dict)
# 注册表
build_registry(args_dict["registry_path"])
devices_and_resources = None
if args_dict["graph"] is not None:
import unilabos.resources.graphio as graph_res
graph_res.physical_setup_graph = (
read_node_link_json(args_dict["graph"])
if args_dict["graph"].endswith(".json")
else read_graphml(args_dict["graph"])
)
devices_and_resources = dict_from_graph(graph_res.physical_setup_graph)
# args_dict["resources_config"] = initialize_resources(list(deepcopy(devices_and_resources).values()))
args_dict["resources_config"] = list(devices_and_resources.values())
args_dict["devices_config"] = dict_to_nested_dict(deepcopy(devices_and_resources), devices_only=False)
args_dict["graph"] = graph_res.physical_setup_graph
else:
if args_dict["devices"] is None or args_dict["resources"] is None:
print_status("Either graph or devices and resources must be provided.", "error")
sys.exit(1)
args_dict["devices_config"] = json.load(open(args_dict["devices"], encoding="utf-8"))
# args_dict["resources_config"] = initialize_resources(
# list(json.load(open(args_dict["resources"], encoding="utf-8")).values())
# )
args_dict["resources_config"] = list(json.load(open(args_dict["resources"], encoding="utf-8")).values())
print_status(f"{len(args_dict['resources_config'])} Resources loaded:", "info")
for i in args_dict["resources_config"]:
print_status(f"DeviceId: {i['id']}, Class: {i['class']}", "info")
if args_dict["controllers"] is not None:
args_dict["controllers_config"] = yaml.safe_load(open(args_dict["controllers"], encoding="utf-8"))
else:
args_dict["controllers_config"] = None
args_dict["bridges"] = []
if "mqtt" in args_dict["app_bridges"]:
args_dict["bridges"].append(mqtt_client)
if "fastapi" in args_dict["app_bridges"]:
args_dict["bridges"].append(http_client)
if "mqtt" in args_dict["app_bridges"]:
def _exit(signum, frame):
mqtt_client.stop()
sys.exit(0)
signal.signal(signal.SIGINT, _exit)
signal.signal(signal.SIGTERM, _exit)
mqtt_client.start()
args_dict["resources_mesh_config"] = {}
# web visiualize 2D
if args_dict["visual"] != "disable":
enable_rviz = args_dict["visual"] == "rviz"
if devices_and_resources is not None:
from unilabos.device_mesh.resource_visalization import ResourceVisualization # 此处开启后logger会变更为INFO有需要请调整
resource_visualization = ResourceVisualization(devices_and_resources, args_dict["resources_config"] ,enable_rviz=enable_rviz)
args_dict["resources_mesh_config"] = resource_visualization.resource_model
start_backend(**args_dict)
server_thread = threading.Thread(target=start_server, kwargs=dict(
open_browser=not args_dict["disable_browser"], port=args_dict["port"],
))
server_thread.start()
asyncio.set_event_loop(asyncio.new_event_loop())
resource_visualization.start()
while True:
time.sleep(1)
else:
start_backend(**args_dict)
start_server(open_browser=not args_dict["disable_browser"], port=args_dict["port"],)
else:
start_backend(**args_dict)
start_server(open_browser=not args_dict["disable_browser"], port=args_dict["port"],)
if __name__ == "__main__":
main()