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lixinyu1011
2025-10-27 20:08:19 +08:00
parent d0279f63f0
commit 3231d60646
14 changed files with 307 additions and 422 deletions
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79
unilabos/resources/bioyond/bottle_carriers.py → unilabos/resources/bioyond/YB_bottle_carriers.py
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@@ -1,18 +1,9 @@
from pylabrobot.resources import create_homogeneous_resources, Coordinate, ResourceHolder, create_ordered_items_2d
from unilabos.resources.itemized_carrier import Bottle, BottleCarrier
from unilabos.resources.bioyond.bottles import (
YB_Solid_Stock,
YB_Solid_Vial,
YB_Liquid_Vial,
YB_Solution_Beaker,
YB_Reagent_Bottle,
YB_5ml_Dispensing_Vial,
YB_20ml_Dispensing_Vial,
YB_Small_Solution_Bottle,
YB_Large_Solution_Bottle,
YB_Large_Dispense_Head,
YB_Pipette_Tip
from unilabos.resources.bioyond.YB_bottles import (
YB_jia_yang_tou_da,
YB_ye_Bottle
)
# 命名约定：试剂瓶-Bottle，烧杯-Beaker，烧瓶-Flask，小瓶-Vial
@@ -207,10 +198,9 @@ def YB_6VialCarrier(name: str) -> BottleCarrier:
carrier[i] = YB_Liquid_Vial(f"{name}_liquidvial_{ordering[i]}")
return carrier
"""1瓶载架 - 单个中央位置"""
def YB_1BottleCarrier(name: str) -> BottleCarrier:
"""1瓶载架 - 单个中央位置"""
# 载架尺寸 (mm)
carrier_size_x = 127.8
carrier_size_y = 85.5
@@ -241,49 +231,13 @@ def YB_1BottleCarrier(name: str) -> BottleCarrier:
carrier.num_items_x = 1
carrier.num_items_y = 1
carrier.num_items_z = 1
carrier[0] = YB_Reagent_Bottle(f"{name}_flask_1")
return carrier
def YB_1FlaskCarrier(name: str) -> BottleCarrier:
"""1瓶载架 - 单个中央位置"""
# 载架尺寸 (mm)
carrier_size_x = 127.8
carrier_size_y = 85.5
carrier_size_z = 20.0
# 烧杯尺寸
beaker_diameter = 70.0
# 计算中央位置
center_x = (carrier_size_x - beaker_diameter) / 2
center_y = (carrier_size_y - beaker_diameter) / 2
center_z = 5.0
carrier = BottleCarrier(
name=name,
size_x=carrier_size_x,
size_y=carrier_size_y,
size_z=carrier_size_z,
sites=create_homogeneous_resources(
klass=ResourceHolder,
locations=[Coordinate(center_x, center_y, center_z)],
resource_size_x=beaker_diameter,
resource_size_y=beaker_diameter,
name_prefix=name,
),
model="1FlaskCarrier",
)
carrier.num_items_x = 1
carrier.num_items_y = 1
carrier.num_items_z = 1
carrier[0] = YB_Reagent_Bottle(f"{name}_bottle_1")
carrier[0] = YB_ye_Bottle(f"{name}_flask_1")
return carrier
"""5ml分液瓶板 - 4x2布局，8个位置"""
def YB_6x5ml_DispensingVialCarrier(name: str) -> BottleCarrier:
"""5ml分液瓶板 - 4x2布局，8个位置"""
# 载架尺寸 (mm)
carrier_size_x = 127.8
@@ -331,9 +285,9 @@ def YB_6x5ml_DispensingVialCarrier(name: str) -> BottleCarrier:
carrier[i] = YB_5ml_Dispensing_Vial(f"{name}_vial_{ordering[i]}")
return carrier
"""20ml分液瓶板 - 4x2布局，8个位置"""
def YB_6x20ml_DispensingVialCarrier(name: str) -> BottleCarrier:
"""20ml分液瓶板 - 4x2布局，8个位置"""
# 载架尺寸 (mm)
carrier_size_x = 127.8
@@ -381,9 +335,9 @@ def YB_6x20ml_DispensingVialCarrier(name: str) -> BottleCarrier:
carrier[i] = YB_20ml_Dispensing_Vial(f"{name}_vial_{ordering[i]}")
return carrier
"""配液瓶(小)板 - 4x2布局，8个位置"""
def YB_6x_SmallSolutionBottleCarrier(name: str) -> BottleCarrier:
"""配液瓶(小)板 - 4x2布局，8个位置"""
# 载架尺寸 (mm)
carrier_size_x = 127.8
@@ -481,10 +435,9 @@ def YB_4x_LargeSolutionBottleCarrier(name: str) -> BottleCarrier:
carrier[i] = YB_Large_Solution_Bottle(f"{name}_bottle_{ordering[i]}")
return carrier
def YB_6x_LargeDispenseHeadCarrier(name: str) -> BottleCarrier:
"""加样头(大)板 - 1x1布局，1个位置"""
"""加样头(大)板 - 1x1布局，1个位置"""
def YB_jia_yang_tou_da_1X1_carrier(name: str) -> BottleCarrier:
# 载架尺寸 (mm)
carrier_size_x = 127.8
carrier_size_y = 85.5
@@ -526,7 +479,7 @@ def YB_6x_LargeDispenseHeadCarrier(name: str) -> BottleCarrier:
carrier.num_items_x = 1
carrier.num_items_y = 1
carrier.num_items_z = 1
carrier[0] = YB_Large_Dispense_Head(f"{name}_head_1")
carrier[0] = YB_jia_yang_tou_da(f"{name}_head_1")
return carrier

38
unilabos/resources/bioyond/YB_bottles.py Normal file
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@@ -0,0 +1,38 @@
from unilabos.resources.itemized_carrier import Bottle, BottleCarrier
# 工厂函数
"""加样头（大）"""
def YB_jia_yang_tou_da(
name: str,
diameter: float = 20.0,
height: float = 100.0,
max_volume: float = 30000.0, # 30mL
barcode: str = None,
) -> Bottle:
"""创建粉末瓶"""
return Bottle(
name=name,
diameter=diameter,# 未知
height=height,
max_volume=max_volume,
barcode=barcode,
model="Solid_Stock",
)
"""液1x1"""
def YB_ye_Bottle(
name: str,
diameter: float = 40.0,
height: float = 70.0,
max_volume: float = 50000.0, # 50mL
barcode: str = None,
) -> Bottle:
"""创建液体瓶"""
return Bottle(
name=name,
diameter=diameter,
height=height,
max_volume=max_volume,
barcode=barcode,
model="Liquid_Bottle",
)

160
unilabos/resources/bioyond/YB_warehouses.py Normal file
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@@ -0,0 +1,160 @@
from unilabos.resources.warehouse import WareHouse, warehouse_factory
def bioyond_warehouse_1x4x4(name: str) -> WareHouse:
"""创建BioYond 4x1x4仓库"""
return warehouse_factory(
name=name,
num_items_x=1,
num_items_y=4,
num_items_z=4,
dx=10.0,
dy=10.0,
dz=10.0,
item_dx=137.0,
item_dy=96.0,
item_dz=120.0,
category="warehouse",
)
def bioyond_warehouse_1x4x2(name: str) -> WareHouse:
"""创建BioYond 4x1x2仓库"""
return warehouse_factory(
name=name,
num_items_x=1,
num_items_y=4,
num_items_z=2,
dx=10.0,
dy=10.0,
dz=10.0,
item_dx=137.0,
item_dy=96.0,
item_dz=120.0,
category="warehouse",
removed_positions=None
)
# 定义benyond的堆栈
def bioyond_warehouse_1x2x2(name: str) -> WareHouse:
"""创建BioYond 4x1x4仓库"""
return warehouse_factory(
name=name,
num_items_x=2,
num_items_y=2,
num_items_z=1,
dx=10.0,
dy=10.0,
dz=10.0,
item_dx=137.0,
item_dy=96.0,
item_dz=120.0,
category="YB_warehouse",
)
def bioyond_warehouse_10x1x1(name: str) -> WareHouse:
"""创建BioYond 4x1x4仓库"""
return warehouse_factory(
name=name,
num_items_x=10,
num_items_y=1,
num_items_z=1,
dx=10.0,
dy=10.0,
dz=10.0,
item_dx=137.0,
item_dy=96.0,
item_dz=120.0,
category="warehouse",
)
def bioyond_warehouse_1x3x3(name: str) -> WareHouse:
"""创建BioYond 4x1x4仓库"""
return warehouse_factory(
name=name,
num_items_x=1,
num_items_y=3,
num_items_z=3,
dx=10.0,
dy=10.0,
dz=10.0,
item_dx=137.0,
item_dy=96.0,
item_dz=120.0,
category="warehouse",
)
def bioyond_warehouse_2x1x3(name: str) -> WareHouse:
"""创建BioYond 4x1x4仓库"""
return warehouse_factory(
name=name,
num_items_x=2,
num_items_y=1,
num_items_z=3,
dx=10.0,
dy=10.0,
dz=10.0,
item_dx=137.0,
item_dy=96.0,
item_dz=120.0,
category="warehouse",
)
def bioyond_warehouse_3x3x1(name: str) -> WareHouse:
"""创建BioYond 4x1x4仓库"""
return warehouse_factory(
name=name,
num_items_x=3,
num_items_y=3,
num_items_z=1,
dx=10.0,
dy=10.0,
dz=10.0,
item_dx=137.0,
item_dy=96.0,
item_dz=120.0,
category="warehouse",
)
def bioyond_warehouse_5x1x1(name: str) -> WareHouse:
"""创建BioYond 4x1x4仓库"""
return warehouse_factory(
name=name,
num_items_x=5,
num_items_y=1,
num_items_z=1,
dx=10.0,
dy=10.0,
dz=10.0,
item_dx=137.0,
item_dy=96.0,
item_dz=120.0,
category="warehouse",
)
def bioyond_warehouse_3x3x1_2(name: str) -> WareHouse:
"""创建BioYond 4x1x4仓库"""
return warehouse_factory(
name=name,
num_items_x=3,
num_items_y=3,
num_items_z=1,
dx=12.0,
dy=12.0,
dz=12.0,
item_dx=137.0,
item_dy=96.0,
item_dz=120.0,
category="warehouse",
)
def bioyond_warehouse_liquid_and_lid_handling(name: str) -> WareHouse:
"""创建BioYond开关盖加液模块台面"""
return warehouse_factory(
name=name,
num_items_x=2,
num_items_y=5,
num_items_z=1,
dx=10.0,
dy=10.0,
dz=10.0,
item_dx=137.0,
item_dy=96.0,
item_dz=120.0,
category="warehouse",
removed_positions=None
)

148
unilabos/resources/bioyond/bottle_carriers copy.py
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@@ -1,148 +0,0 @@
from pylabrobot.resources import create_homogeneous_resources, Coordinate, ResourceHolder, create_ordered_items_2d
from unilabos.resources.itemized_carrier import Bottle, BottleCarrier
from unilabos.resources.bioyond.bottles import (
YB_jia_yang_tou_da,
)
# 命名约定：试剂瓶-Bottle，烧杯-Beaker，烧瓶-Flask，小瓶-Vial
def YB_jia_yang_tou_da_1X1_carrier(name: str) -> BottleCarrier:
"""加样头(大)板 - 1x1布局，1个位置"""
# 载架尺寸 (mm)
carrier_size_x = 127.8
carrier_size_y = 85.5
carrier_size_z = 95.0
# 瓶位尺寸
bottle_diameter = 35.0
bottle_spacing_x = 42.0 # X方向间距
bottle_spacing_y = 35.0 # Y方向间距
# 计算起始位置 (居中排列)
start_x = (carrier_size_x - (1 - 1) * bottle_spacing_x - bottle_diameter) / 2
start_y = (carrier_size_y - (1 - 1) * bottle_spacing_y - bottle_diameter) / 2
sites = create_ordered_items_2d(
klass=ResourceHolder,
num_items_x=1,
num_items_y=1,
dx=start_x,
dy=start_y,
dz=5.0,
item_dx=bottle_spacing_x,
item_dy=bottle_spacing_y,
size_x=bottle_diameter,
size_y=bottle_diameter,
size_z=carrier_size_z,
)
for k, v in sites.items():
v.name = f"{name}_{v.name}"
carrier = BottleCarrier(
name=name,
size_x=carrier_size_x,
size_y=carrier_size_y,
size_z=carrier_size_z,
sites=sites,
model="YB_1X1_jia_yang_tou_da_carrier",
)
carrier.num_items_x = 1
carrier.num_items_y = 1
carrier.num_items_z = 1
carrier[0] = YB_jia_yang_tou_da(f"{name}_head_1")
return carrier
def BIOYOND_PolymerStation_AdapterBlock(name: str) -> BottleCarrier:
"""适配器块 - 单个中央位置"""
# 载架尺寸 (mm)
carrier_size_x = 127.8
carrier_size_y = 85.5
carrier_size_z = 30.0
# 适配器尺寸
adapter_diameter = 80.0
# 计算中央位置
center_x = (carrier_size_x - adapter_diameter) / 2
center_y = (carrier_size_y - adapter_diameter) / 2
center_z = 0.0
carrier = BottleCarrier(
name=name,
size_x=carrier_size_x,
size_y=carrier_size_y,
size_z=carrier_size_z,
sites=create_homogeneous_resources(
klass=ResourceHolder,
locations=[Coordinate(center_x, center_y, center_z)],
resource_size_x=adapter_diameter,
resource_size_y=adapter_diameter,
name_prefix=name,
),
model="AdapterBlock",
)
carrier.num_items_x = 1
carrier.num_items_y = 1
carrier.num_items_z = 1
# 适配器块本身不包含瓶子，只是一个支撑结构
return carrier
def BIOYOND_PolymerStation_TipBox(name: str) -> BottleCarrier:
"""枪头盒 - 8x12布局，96个位置"""
# 载架尺寸 (mm)
carrier_size_x = 127.8
carrier_size_y = 85.5
carrier_size_z = 55.0
# 枪头尺寸
tip_diameter = 10.0
tip_spacing_x = 9.0 # X方向间距
tip_spacing_y = 9.0 # Y方向间距
# 计算起始位置 (居中排列)
start_x = (carrier_size_x - (12 - 1) * tip_spacing_x - tip_diameter) / 2
start_y = (carrier_size_y - (8 - 1) * tip_spacing_y - tip_diameter) / 2
sites = create_ordered_items_2d(
klass=ResourceHolder,
num_items_x=12,
num_items_y=8,
dx=start_x,
dy=start_y,
dz=5.0,
item_dx=tip_spacing_x,
item_dy=tip_spacing_y,
size_x=tip_diameter,
size_y=tip_diameter,
size_z=carrier_size_z,
)
for k, v in sites.items():
v.name = f"{name}_{v.name}"
carrier = BottleCarrier(
name=name,
size_x=carrier_size_x,
size_y=carrier_size_y,
size_z=carrier_size_z,
sites=sites,
model="TipBox",
)
carrier.num_items_x = 12
carrier.num_items_y = 8
carrier.num_items_z = 1
# 创建96个枪头
for i in range(96):
row = chr(65 + i // 12) # A-H
col = (i % 12) + 1 # 1-12
carrier[i] = BIOYOND_PolymerStation_Pipette_Tip(f"{name}_tip_{row}{col}")
return carrier

24
unilabos/resources/bioyond/bottles copy.py
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@@ -1,24 +0,0 @@
from unilabos.resources.itemized_carrier import Bottle, BottleCarrier
# 工厂函数
def YB_jia_yang_tou_da(
name: str,
diameter: float = 35.0,
height: float = 90.0,
max_volume: float = 50000.0, # 50mL
code: str = None,
barcode: str = None,
) -> Bottle:
"""创建加样头(大)"""
return Bottle(
name=name,
diameter=diameter,
height=height,
max_volume=max_volume,
barcode=barcode,
code=code,
model="YB_jia_yang_tou_da",
)