mirror of
https://github.com/dptech-corp/Uni-Lab-OS.git
synced 2025-12-15 13:44:39 +00:00
support sleep and create_task in node
This commit is contained in:
@@ -30,6 +30,7 @@ from pylabrobot.liquid_handling.standard import (
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from pylabrobot.resources import Tip, Deck, Plate, Well, TipRack, Resource, Container, Coordinate, TipSpot, Trash
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from unilabos.devices.liquid_handling.liquid_handler_abstract import LiquidHandlerAbstract
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from unilabos.ros.nodes.base_device_node import BaseROS2DeviceNode
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class PRCXIError(RuntimeError):
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@@ -162,6 +163,10 @@ class PRCXI9300Handler(LiquidHandlerAbstract):
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)
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super().__init__(backend=self._unilabos_backend, deck=deck, simulator=simulator, channel_num=channel_num)
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def post_init(self, ros_node: BaseROS2DeviceNode):
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super().post_init(ros_node)
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self._unilabos_backend.post_init(ros_node)
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def set_liquid(self, wells: list[Well], liquid_names: list[str], volumes: list[float]):
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return super().set_liquid(wells, liquid_names, volumes)
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@@ -424,6 +429,7 @@ class PRCXI9300Backend(LiquidHandlerBackend):
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_num_channels = 8 # 默认通道数为 8
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_is_reset_ok = False
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_ros_node: BaseROS2DeviceNode
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@property
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def is_reset_ok(self) -> bool:
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@@ -456,6 +462,9 @@ class PRCXI9300Backend(LiquidHandlerBackend):
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self._execute_setup = setup
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self.debug = debug
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def post_init(self, ros_node: BaseROS2DeviceNode):
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self._ros_node = ros_node
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def create_protocol(self, protocol_name):
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self.protocol_name = protocol_name
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self.steps_todo_list = []
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@@ -500,7 +509,7 @@ class PRCXI9300Backend(LiquidHandlerBackend):
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self.api_client.call("IAutomation", "Reset")
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while not self.is_reset_ok:
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print("Waiting for PRCXI9300 to reset...")
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await asyncio.sleep(1)
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await self._ros_node.sleep(1)
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print("PRCXI9300 reset successfully.")
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except ConnectionRefusedError as e:
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raise RuntimeError(
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@@ -533,7 +542,9 @@ class PRCXI9300Backend(LiquidHandlerBackend):
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tipspot_index = tipspot.parent.children.index(tipspot)
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tip_columns.append(tipspot_index // 8)
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if len(set(tip_columns)) != 1:
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raise ValueError("All pickups must be from the same tip column. Found different columns: " + str(tip_columns))
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raise ValueError(
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"All pickups must be from the same tip column. Found different columns: " + str(tip_columns)
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)
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PlateNo = plate_indexes[0] + 1
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hole_col = tip_columns[0] + 1
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hole_row = 1
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@@ -1109,12 +1120,15 @@ class PRCXI9300Api:
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"LiquidDispensingMethod": liquid_method,
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}
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class DefaultLayout:
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def __init__(self, product_name: str = "PRCXI9300"):
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self.labresource = {}
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if product_name not in ["PRCXI9300", "PRCXI9320"]:
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raise ValueError(f"Unsupported product_name: {product_name}. Only 'PRCXI9300' and 'PRCXI9320' are supported.")
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raise ValueError(
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f"Unsupported product_name: {product_name}. Only 'PRCXI9300' and 'PRCXI9320' are supported."
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)
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if product_name == "PRCXI9300":
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self.rows = 2
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@@ -1129,25 +1143,93 @@ class DefaultLayout:
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self.layout = [1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16]
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self.trash_slot = 16
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self.waste_liquid_slot = 12
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self.default_layout = {"MatrixId":f"{time.time()}","MatrixName":f"{time.time()}","MatrixCount":16,"WorkTablets":
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[{"Number": 1, "Code": "T1", "Material": {"uuid": "57b1e4711e9e4a32b529f3132fc5931f", "materialEnum": 0}},
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{"Number": 2, "Code": "T2", "Material": {"uuid": "57b1e4711e9e4a32b529f3132fc5931f", "materialEnum": 0}},
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{"Number": 3, "Code": "T3", "Material": {"uuid": "57b1e4711e9e4a32b529f3132fc5931f", "materialEnum": 0}},
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{"Number": 4, "Code": "T4", "Material": {"uuid": "57b1e4711e9e4a32b529f3132fc5931f", "materialEnum": 0}},
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{"Number": 5, "Code": "T5", "Material": {"uuid": "57b1e4711e9e4a32b529f3132fc5931f", "materialEnum": 0}},
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{"Number": 6, "Code": "T6", "Material": {"uuid": "57b1e4711e9e4a32b529f3132fc5931f", "materialEnum": 0}},
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{"Number": 7, "Code": "T7", "Material": {"uuid": "57b1e4711e9e4a32b529f3132fc5931f", "materialEnum": 0}},
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{"Number": 8, "Code": "T8", "Material": {"uuid": "57b1e4711e9e4a32b529f3132fc5931f", "materialEnum": 0}},
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{"Number": 9, "Code": "T9", "Material": {"uuid": "57b1e4711e9e4a32b529f3132fc5931f", "materialEnum": 0}},
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{"Number": 10, "Code": "T10", "Material": {"uuid": "57b1e4711e9e4a32b529f3132fc5931f", "materialEnum": 0}},
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{"Number": 11, "Code": "T11", "Material": {"uuid": "57b1e4711e9e4a32b529f3132fc5931f", "materialEnum": 0}},
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{"Number": 12, "Code": "T12", "Material": {"uuid": "730067cf07ae43849ddf4034299030e9", "materialEnum": 0}}, # 这个设置成废液槽,用储液槽表示
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{"Number": 13, "Code": "T13", "Material": {"uuid": "57b1e4711e9e4a32b529f3132fc5931f", "materialEnum": 0}},
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{"Number": 14, "Code": "T14", "Material": {"uuid": "57b1e4711e9e4a32b529f3132fc5931f", "materialEnum": 0}},
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{"Number": 15, "Code": "T15", "Material": {"uuid": "57b1e4711e9e4a32b529f3132fc5931f", "materialEnum": 0}},
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{"Number": 16, "Code": "T16", "Material": {"uuid": "730067cf07ae43849ddf4034299030e9", "materialEnum": 0}} # 这个设置成垃圾桶,用储液槽表示
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]
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}
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self.default_layout = {
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"MatrixId": f"{time.time()}",
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"MatrixName": f"{time.time()}",
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"MatrixCount": 16,
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"WorkTablets": [
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{
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"Number": 1,
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"Code": "T1",
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"Material": {"uuid": "57b1e4711e9e4a32b529f3132fc5931f", "materialEnum": 0},
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},
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{
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"Number": 2,
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"Code": "T2",
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"Material": {"uuid": "57b1e4711e9e4a32b529f3132fc5931f", "materialEnum": 0},
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},
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{
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"Number": 3,
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"Code": "T3",
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"Material": {"uuid": "57b1e4711e9e4a32b529f3132fc5931f", "materialEnum": 0},
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},
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{
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"Number": 4,
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"Code": "T4",
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"Material": {"uuid": "57b1e4711e9e4a32b529f3132fc5931f", "materialEnum": 0},
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},
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{
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"Number": 5,
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"Code": "T5",
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"Material": {"uuid": "57b1e4711e9e4a32b529f3132fc5931f", "materialEnum": 0},
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},
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{
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"Number": 6,
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"Code": "T6",
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"Material": {"uuid": "57b1e4711e9e4a32b529f3132fc5931f", "materialEnum": 0},
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},
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{
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"Number": 7,
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"Code": "T7",
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"Material": {"uuid": "57b1e4711e9e4a32b529f3132fc5931f", "materialEnum": 0},
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},
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{
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"Number": 8,
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"Code": "T8",
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"Material": {"uuid": "57b1e4711e9e4a32b529f3132fc5931f", "materialEnum": 0},
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},
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{
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"Number": 9,
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"Code": "T9",
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"Material": {"uuid": "57b1e4711e9e4a32b529f3132fc5931f", "materialEnum": 0},
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},
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{
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"Number": 10,
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"Code": "T10",
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"Material": {"uuid": "57b1e4711e9e4a32b529f3132fc5931f", "materialEnum": 0},
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},
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{
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"Number": 11,
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"Code": "T11",
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"Material": {"uuid": "57b1e4711e9e4a32b529f3132fc5931f", "materialEnum": 0},
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},
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{
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"Number": 12,
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"Code": "T12",
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"Material": {"uuid": "730067cf07ae43849ddf4034299030e9", "materialEnum": 0},
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}, # 这个设置成废液槽,用储液槽表示
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{
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"Number": 13,
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"Code": "T13",
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"Material": {"uuid": "57b1e4711e9e4a32b529f3132fc5931f", "materialEnum": 0},
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},
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{
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"Number": 14,
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"Code": "T14",
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"Material": {"uuid": "57b1e4711e9e4a32b529f3132fc5931f", "materialEnum": 0},
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},
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{
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"Number": 15,
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"Code": "T15",
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"Material": {"uuid": "57b1e4711e9e4a32b529f3132fc5931f", "materialEnum": 0},
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},
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{
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"Number": 16,
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"Code": "T16",
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"Material": {"uuid": "730067cf07ae43849ddf4034299030e9", "materialEnum": 0},
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}, # 这个设置成垃圾桶,用储液槽表示
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],
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}
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def get_layout(self) -> Dict[str, Any]:
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return {
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@@ -1155,7 +1237,7 @@ class DefaultLayout:
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"columns": self.columns,
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"layout": self.layout,
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"trash_slot": self.trash_slot,
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"waste_liquid_slot": self.waste_liquid_slot
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"waste_liquid_slot": self.waste_liquid_slot,
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}
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def get_trash_slot(self) -> int:
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@@ -1178,17 +1260,19 @@ class DefaultLayout:
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reserved_positions = {12, 16}
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available_positions = [i for i in range(1, 17) if i not in reserved_positions]
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# 计算总需求
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# 计算总需求
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total_needed = sum(count for _, _, count in needs)
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if total_needed > len(available_positions):
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raise ValueError(f"需要 {total_needed} 个位置,但只有 {len(available_positions)} 个可用位置(排除位置12和16)")
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raise ValueError(
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f"需要 {total_needed} 个位置,但只有 {len(available_positions)} 个可用位置(排除位置12和16)"
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)
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# 依次分配位置
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current_pos = 0
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for reagent_name, material_name, count in needs:
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material_uuid = self.labresource[material_name]['uuid']
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material_enum = self.labresource[material_name]['materialEnum']
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material_uuid = self.labresource[material_name]["uuid"]
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material_enum = self.labresource[material_name]["materialEnum"]
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for _ in range(count):
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if current_pos >= len(available_positions):
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@@ -1196,17 +1280,18 @@ class DefaultLayout:
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position = available_positions[current_pos]
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# 找到对应的tablet并更新
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for tablet in self.default_layout['WorkTablets']:
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if tablet['Number'] == position:
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tablet['Material']['uuid'] = material_uuid
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tablet['Material']['materialEnum'] = material_enum
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layout_list.append(dict(reagent_name=reagent_name, material_name=material_name, positions=position))
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for tablet in self.default_layout["WorkTablets"]:
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if tablet["Number"] == position:
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tablet["Material"]["uuid"] = material_uuid
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tablet["Material"]["materialEnum"] = material_enum
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layout_list.append(
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dict(reagent_name=reagent_name, material_name=material_name, positions=position)
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)
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break
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current_pos += 1
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return self.default_layout, layout_list
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if __name__ == "__main__":
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# Example usage
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# 1. 用导出的json,给每个T1 T2板子设定相应的物料,如果是孔板和枪头盒,要对应区分
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@@ -1302,10 +1387,7 @@ if __name__ == "__main__":
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# # # plate2.set_well_liquids(plate_2_liquids)
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# handler = PRCXI9300Handler(deck=deck, host="10.181.214.132", port=9999,
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# handler = PRCXI9300Handler(deck=deck, host="10.181.214.132", port=9999,
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# timeout=10.0, setup=False, debug=False,
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# simulator=True,
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# matrix_id="71593",
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@@ -1391,10 +1473,7 @@ if __name__ == "__main__":
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# # input("Press Enter to continue...") # Wait for user input before proceeding
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# # print("PRCXI9300Handler initialized with deck and host settings.")
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### 9320 ###
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### 9320 ###
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deck = PRCXI9300Deck(name="PRCXI_Deck", size_x=100, size_y=100, size_z=100)
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@@ -1412,12 +1491,15 @@ if __name__ == "__main__":
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new_plate: PRCXI9300Container = PRCXI9300Container.deserialize(well_containers)
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return new_plate
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def get_tip_rack(name: str, child_prefix: str="tip") -> PRCXI9300Container:
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def get_tip_rack(name: str, child_prefix: str = "tip") -> PRCXI9300Container:
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tip_racks = opentrons_96_tiprack_10ul(name).serialize()
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tip_rack = PRCXI9300Container(
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name=name, size_x=50, size_y=50, size_z=10, category="tip_rack", ordering=collections.OrderedDict({
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k: f"{child_prefix}_{k}" for k, v in tip_racks["ordering"].items()
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})
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name=name,
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size_x=50,
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size_y=50,
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size_z=10,
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category="tip_rack",
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ordering=collections.OrderedDict({k: f"{child_prefix}_{k}" for k, v in tip_racks["ordering"].items()}),
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)
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tip_rack_serialized = tip_rack.serialize()
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tip_rack_serialized["parent_name"] = deck.name
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@@ -1629,6 +1711,7 @@ if __name__ == "__main__":
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)
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backend: PRCXI9300Backend = handler.backend
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from pylabrobot.resources import set_volume_tracking
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set_volume_tracking(enabled=True)
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# res = backend.api_client.get_all_materials()
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asyncio.run(handler.setup()) # Initialize the handler and setup the connection
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@@ -1640,10 +1723,10 @@ if __name__ == "__main__":
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for well in plate13.get_all_items():
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# well_pos = well.name.split("_")[1] # 走一行
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# if well_pos.startswith("A"):
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if well.name.startswith("PlateT13"): # 走整个Plate
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# if well_pos.startswith("A"):
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if well.name.startswith("PlateT13"): # 走整个Plate
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asyncio.run(handler.dispense([well], [0.01], [0]))
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# asyncio.run(handler.dispense([plate10.get_item("H12")], [1], [0]))
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# asyncio.run(handler.dispense([plate13.get_item("A1")], [1], [0]))
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# asyncio.run(handler.dispense([plate14.get_item("C5")], [1], [0]))
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@@ -1652,26 +1735,25 @@ if __name__ == "__main__":
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asyncio.run(handler.run_protocol())
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time.sleep(5)
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os._exit(0)
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# 第一种情景:一个孔往多个孔加液
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# 第一种情景:一个孔往多个孔加液
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# plate_2_liquids = handler.set_group("water", [plate2.children[0]], [300])
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# plate5_liquids = handler.set_group("master_mix", plate5.children[:23], [100]*23)
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# 第二个情景:多个孔往多个孔加液(但是个数得对应)
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plate_2_liquids = handler.set_group("water", plate2.children[:23], [300]*23)
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plate5_liquids = handler.set_group("master_mix", plate5.children[:23], [100]*23)
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# 第二个情景:多个孔往多个孔加液(但是个数得对应)
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plate_2_liquids = handler.set_group("water", plate2.children[:23], [300] * 23)
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plate5_liquids = handler.set_group("master_mix", plate5.children[:23], [100] * 23)
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# plate11.set_well_liquids([("Water", 100) if (i % 8 == 0 and i // 8 < 6) else (None, 100) for i in range(96)]) # Set liquids for every 8 wells in plate8
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# plate11.set_well_liquids([("Water", 100) if (i % 8 == 0 and i // 8 < 6) else (None, 100) for i in range(96)]) # Set liquids for every 8 wells in plate8
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# A = tree_to_list([resource_plr_to_ulab(deck)])
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# # with open("deck.json", "w", encoding="utf-8") as f:
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# # json.dump(A, f, indent=4, ensure_ascii=False)
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# A = tree_to_list([resource_plr_to_ulab(deck)])
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# # with open("deck.json", "w", encoding="utf-8") as f:
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# # json.dump(A, f, indent=4, ensure_ascii=False)
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# print(plate11.get_well(0).tracker.get_used_volume())
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# Initialize the backend and setup the connection
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# print(plate11.get_well(0).tracker.get_used_volume())
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# Initialize the backend and setup the connection
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asyncio.run(handler.transfer_group("water", "master_mix", 10)) # Reset tip tracking
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# asyncio.run(handler.pick_up_tips([plate8.children[8]],[0]))
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# print(plate8.children[8])
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# asyncio.run(handler.run_protocol())
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@@ -1685,121 +1767,118 @@ if __name__ == "__main__":
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# print(plate1.children[0])
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# asyncio.run(handler.discard_tips([0]))
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# asyncio.run(handler.add_liquid(
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# asp_vols=[10]*7,
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# dis_vols=[10]*7,
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# reagent_sources=plate11.children[:7],
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# targets=plate1.children[2:9],
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# use_channels=[0],
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# flow_rates=[None] * 7,
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# offsets=[Coordinate(0, 0, 0)] * 7,
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# liquid_height=[None] * 7,
|
||||
# blow_out_air_volume=[None] * 2,
|
||||
# delays=None,
|
||||
# mix_time=3,
|
||||
# mix_vol=5,
|
||||
# spread="custom",
|
||||
# ))
|
||||
# asyncio.run(handler.add_liquid(
|
||||
# asp_vols=[10]*7,
|
||||
# dis_vols=[10]*7,
|
||||
# reagent_sources=plate11.children[:7],
|
||||
# targets=plate1.children[2:9],
|
||||
# use_channels=[0],
|
||||
# flow_rates=[None] * 7,
|
||||
# offsets=[Coordinate(0, 0, 0)] * 7,
|
||||
# liquid_height=[None] * 7,
|
||||
# blow_out_air_volume=[None] * 2,
|
||||
# delays=None,
|
||||
# mix_time=3,
|
||||
# mix_vol=5,
|
||||
# spread="custom",
|
||||
# ))
|
||||
|
||||
# asyncio.run(handler.run_protocol()) # Run the protocol
|
||||
|
||||
# # # asyncio.run(handler.transfer_liquid(
|
||||
# # # asp_vols=[10]*2,
|
||||
# # # dis_vols=[10]*2,
|
||||
# # # sources=plate11.children[:2],
|
||||
# # # targets=plate11.children[-2:],
|
||||
# # # use_channels=[0],
|
||||
# # # offsets=[Coordinate(0, 0, 0)] * 4,
|
||||
# # # liquid_height=[None] * 2,
|
||||
# # # blow_out_air_volume=[None] * 2,
|
||||
# # # delays=None,
|
||||
# # # mix_times=3,
|
||||
# # # mix_vol=5,
|
||||
# # # spread="wide",
|
||||
# # # tip_racks=[plate8]
|
||||
# # # ))
|
||||
|
||||
# # # asyncio.run(handler.remove_liquid(
|
||||
# # # vols=[10]*2,
|
||||
# # # sources=plate11.children[:2],
|
||||
# # # waste_liquid=plate11.children[43],
|
||||
# # # use_channels=[0],
|
||||
# # # offsets=[Coordinate(0, 0, 0)] * 4,
|
||||
# # # liquid_height=[None] * 2,
|
||||
# # # blow_out_air_volume=[None] * 2,
|
||||
# # # delays=None,
|
||||
# # # spread="wide"
|
||||
# # # ))
|
||||
# # asyncio.run(handler.run_protocol())
|
||||
|
||||
# # # asyncio.run(handler.discard_tips())
|
||||
# # # asyncio.run(handler.mix(well_containers.children[:8
|
||||
# # # ], mix_time=3, mix_vol=50, height_to_bottom=0.5, offsets=Coordinate(0, 0, 0), mix_rate=100))
|
||||
# # #print(json.dumps(handler._unilabos_backend.steps_todo_list, indent=2)) # Print matrix info
|
||||
|
||||
# # # asyncio.run(handler.transfer_liquid(
|
||||
# # # asp_vols=[10]*2,
|
||||
# # # dis_vols=[10]*2,
|
||||
# # # sources=plate11.children[:2],
|
||||
# # # targets=plate11.children[-2:],
|
||||
# # # use_channels=[0],
|
||||
# # # offsets=[Coordinate(0, 0, 0)] * 4,
|
||||
# # # liquid_height=[None] * 2,
|
||||
# # # blow_out_air_volume=[None] * 2,
|
||||
# # # delays=None,
|
||||
# # # mix_times=3,
|
||||
# # # mix_vol=5,
|
||||
# # # spread="wide",
|
||||
# # # tip_racks=[plate8]
|
||||
# # # ))
|
||||
|
||||
# # # asyncio.run(handler.remove_liquid(
|
||||
# # # vols=[10]*2,
|
||||
# # # sources=plate11.children[:2],
|
||||
# # # waste_liquid=plate11.children[43],
|
||||
# # # use_channels=[0],
|
||||
# # # offsets=[Coordinate(0, 0, 0)] * 4,
|
||||
# # # liquid_height=[None] * 2,
|
||||
# # # blow_out_air_volume=[None] * 2,
|
||||
# # # delays=None,
|
||||
# # # spread="wide"
|
||||
# # # ))
|
||||
# # asyncio.run(handler.run_protocol())
|
||||
|
||||
# # # asyncio.run(handler.discard_tips())
|
||||
# # # asyncio.run(handler.mix(well_containers.children[:8
|
||||
# # # ], mix_time=3, mix_vol=50, height_to_bottom=0.5, offsets=Coordinate(0, 0, 0), mix_rate=100))
|
||||
# # #print(json.dumps(handler._unilabos_backend.steps_todo_list, indent=2)) # Print matrix info
|
||||
|
||||
|
||||
# # # asyncio.run(handler.remove_liquid(
|
||||
# # # vols=[100]*16,
|
||||
# # # sources=well_containers.children[-16:],
|
||||
# # # waste_liquid=well_containers.children[:16], # 这个有些奇怪,但是好像也只能这么写
|
||||
# # # use_channels=[0, 1, 2, 3, 4, 5, 6, 7],
|
||||
# # # flow_rates=[None] * 32,
|
||||
# # # offsets=[Coordinate(0, 0, 0)] * 32,
|
||||
# # # liquid_height=[None] * 32,
|
||||
# # # blow_out_air_volume=[None] * 32,
|
||||
# # # spread="wide",
|
||||
# # # ))
|
||||
# # # asyncio.run(handler.transfer_liquid(
|
||||
# # # asp_vols=[100]*16,
|
||||
# # # dis_vols=[100]*16,
|
||||
# # # tip_racks=[tip_rack],
|
||||
# # # sources=well_containers.children[-16:],
|
||||
# # # targets=well_containers.children[:16],
|
||||
# # # use_channels=[0, 1, 2, 3, 4, 5, 6, 7],
|
||||
# # # offsets=[Coordinate(0, 0, 0)] * 32,
|
||||
# # # asp_flow_rates=[None] * 16,
|
||||
# # # dis_flow_rates=[None] * 16,
|
||||
# # # liquid_height=[None] * 32,
|
||||
# # # blow_out_air_volume=[None] * 32,
|
||||
# # # mix_times=3,
|
||||
# # # mix_vol=50,
|
||||
# # # spread="wide",
|
||||
# # # ))
|
||||
# # print(json.dumps(handler._unilabos_backend.steps_todo_list, indent=2)) # Print matrix info
|
||||
# # # input("pick_up_tips add step")
|
||||
#asyncio.run(handler.run_protocol()) # Run the protocol
|
||||
# # # input("Running protocol...")
|
||||
# # # input("Press Enter to continue...") # Wait for user input before proceeding
|
||||
# # # print("PRCXI9300Handler initialized with deck and host settings.")
|
||||
|
||||
|
||||
# 一些推荐版位组合的测试样例:
|
||||
|
||||
# 一些推荐版位组合的测试样例:
|
||||
# # # asyncio.run(handler.remove_liquid(
|
||||
# # # vols=[100]*16,
|
||||
# # # sources=well_containers.children[-16:],
|
||||
# # # waste_liquid=well_containers.children[:16], # 这个有些奇怪,但是好像也只能这么写
|
||||
# # # use_channels=[0, 1, 2, 3, 4, 5, 6, 7],
|
||||
# # # flow_rates=[None] * 32,
|
||||
# # # offsets=[Coordinate(0, 0, 0)] * 32,
|
||||
# # # liquid_height=[None] * 32,
|
||||
# # # blow_out_air_volume=[None] * 32,
|
||||
# # # spread="wide",
|
||||
# # # ))
|
||||
# # # asyncio.run(handler.transfer_liquid(
|
||||
# # # asp_vols=[100]*16,
|
||||
# # # dis_vols=[100]*16,
|
||||
# # # tip_racks=[tip_rack],
|
||||
# # # sources=well_containers.children[-16:],
|
||||
# # # targets=well_containers.children[:16],
|
||||
# # # use_channels=[0, 1, 2, 3, 4, 5, 6, 7],
|
||||
# # # offsets=[Coordinate(0, 0, 0)] * 32,
|
||||
# # # asp_flow_rates=[None] * 16,
|
||||
# # # dis_flow_rates=[None] * 16,
|
||||
# # # liquid_height=[None] * 32,
|
||||
# # # blow_out_air_volume=[None] * 32,
|
||||
# # # mix_times=3,
|
||||
# # # mix_vol=50,
|
||||
# # # spread="wide",
|
||||
# # # ))
|
||||
# # print(json.dumps(handler._unilabos_backend.steps_todo_list, indent=2)) # Print matrix info
|
||||
# # # input("pick_up_tips add step")
|
||||
# asyncio.run(handler.run_protocol()) # Run the protocol
|
||||
# # # input("Running protocol...")
|
||||
# # # input("Press Enter to continue...") # Wait for user input before proceeding
|
||||
# # # print("PRCXI9300Handler initialized with deck and host settings.")
|
||||
|
||||
# 一些推荐版位组合的测试样例:
|
||||
|
||||
# 一些推荐版位组合的测试样例:
|
||||
|
||||
with open("prcxi_material.json", "r") as f:
|
||||
material_info = json.load(f)
|
||||
|
||||
layout = DefaultLayout("PRCXI9320")
|
||||
layout.add_lab_resource(material_info)
|
||||
MatrixLayout_1, dict_1 = layout.recommend_layout([
|
||||
("reagent_1", "96 细胞培养皿", 3),
|
||||
("reagent_2", "12道储液槽", 1),
|
||||
("reagent_3", "200μL Tip头", 7),
|
||||
("reagent_4", "10μL加长 Tip头", 1),
|
||||
])
|
||||
MatrixLayout_1, dict_1 = layout.recommend_layout(
|
||||
[
|
||||
("reagent_1", "96 细胞培养皿", 3),
|
||||
("reagent_2", "12道储液槽", 1),
|
||||
("reagent_3", "200μL Tip头", 7),
|
||||
("reagent_4", "10μL加长 Tip头", 1),
|
||||
]
|
||||
)
|
||||
print(dict_1)
|
||||
MatrixLayout_2, dict_2 = layout.recommend_layout([
|
||||
("reagent_1", "96深孔板", 4),
|
||||
("reagent_2", "12道储液槽", 1),
|
||||
("reagent_3", "200μL Tip头", 1),
|
||||
("reagent_4", "10μL加长 Tip头", 1),
|
||||
])
|
||||
MatrixLayout_2, dict_2 = layout.recommend_layout(
|
||||
[
|
||||
("reagent_1", "96深孔板", 4),
|
||||
("reagent_2", "12道储液槽", 1),
|
||||
("reagent_3", "200μL Tip头", 1),
|
||||
("reagent_4", "10μL加长 Tip头", 1),
|
||||
]
|
||||
)
|
||||
|
||||
# with open("prcxi_material.json", "r") as f:
|
||||
# material_info = json.load(f)
|
||||
|
||||
@@ -53,7 +53,7 @@ from unilabos.ros.nodes.resource_tracker import (
|
||||
)
|
||||
from unilabos.ros.x.rclpyx import get_event_loop
|
||||
from unilabos.ros.utils.driver_creator import WorkstationNodeCreator, PyLabRobotCreator, DeviceClassCreator
|
||||
from rclpy.task import Task
|
||||
from rclpy.task import Task, Future
|
||||
from unilabos.utils.import_manager import default_manager
|
||||
from unilabos.utils.log import info, debug, warning, error, critical, logger, trace
|
||||
from unilabos.utils.type_check import get_type_class, TypeEncoder, get_result_info_str
|
||||
@@ -555,6 +555,15 @@ class BaseROS2DeviceNode(Node, Generic[T]):
|
||||
rclpy.get_global_executor().add_node(self)
|
||||
self.lab_logger().debug(f"ROS节点初始化完成")
|
||||
|
||||
async def sleep(self, rel_time: float, callback_group=None):
|
||||
if callback_group is None:
|
||||
callback_group = self.callback_group
|
||||
await ROS2DeviceNode.async_wait_for(self, rel_time, callback_group)
|
||||
|
||||
@classmethod
|
||||
async def create_task(cls, func, trace_error=True, **kwargs) -> Task:
|
||||
return ROS2DeviceNode.run_async_func(func, trace_error, **kwargs)
|
||||
|
||||
async def update_resource(self, resources: List["ResourcePLR"]):
|
||||
r = SerialCommand.Request()
|
||||
tree_set = ResourceTreeSet.from_plr_resources(resources)
|
||||
@@ -1399,6 +1408,14 @@ class ROS2DeviceNode:
|
||||
future.add_done_callback(_handle_future_exception)
|
||||
return future
|
||||
|
||||
@classmethod
|
||||
async def async_wait_for(cls, node: Node, wait_time: float, callback_group=None):
|
||||
future = Future()
|
||||
timer = node.create_timer(wait_time, lambda : future.set_result(None), callback_group=callback_group, clock=node.get_clock())
|
||||
await future
|
||||
timer.cancel()
|
||||
node.destroy_timer(timer)
|
||||
|
||||
@property
|
||||
def driver_instance(self):
|
||||
return self._driver_instance
|
||||
|
||||
@@ -18,7 +18,8 @@ from unilabos_msgs.srv import (
|
||||
ResourceDelete,
|
||||
ResourceUpdate,
|
||||
ResourceList,
|
||||
SerialCommand, ResourceGet,
|
||||
SerialCommand,
|
||||
ResourceGet,
|
||||
) # type: ignore
|
||||
from unilabos_msgs.srv._serial_command import SerialCommand_Request, SerialCommand_Response
|
||||
from unique_identifier_msgs.msg import UUID
|
||||
|
||||
Reference in New Issue
Block a user