stir和adjustph的中的bug修不好

This commit is contained in:
KCFeng425
2025-07-18 00:28:12 +08:00
committed by Junhan Chang
parent ad54308046
commit 992b8a03d0
6 changed files with 302 additions and 24 deletions

View File

@@ -1,6 +1,6 @@
import networkx as nx
import logging
from typing import List, Dict, Any
from typing import List, Dict, Any, Union
from .pump_protocol import generate_pump_protocol_with_rinsing
logger = logging.getLogger(__name__)
@@ -216,7 +216,7 @@ def calculate_reagent_volume(target_ph_value: float, reagent: str, vessel_volume
def generate_adjust_ph_protocol(
G: nx.DiGraph,
vessel: dict, # 🔧 修改:从字符串改为字典类型
vessel:Union[dict,str], # 🔧 修改:从字符串改为字典类型
ph_value: float,
reagent: str,
**kwargs
@@ -235,8 +235,17 @@ def generate_adjust_ph_protocol(
List[Dict[str, Any]]: 动作序列
"""
# 🔧 核心修改从字典中提取容器ID
vessel_id = vessel["id"]
# 统一处理vessel参数
if isinstance(vessel, dict):
vessel_id = vessel.get("id", "")
vessel_data = vessel.get("data", {})
else:
vessel_id = str(vessel)
vessel_data = G.nodes[vessel_id].get("data", {}) if vessel_id in G.nodes() else {}
if not vessel_id:
debug_print("❌ vessel 参数无效必须包含id字段或直接提供容器ID")
raise ValueError("vessel 参数无效必须包含id字段或直接提供容器ID")
debug_print("=" * 60)
debug_print("🧪 开始生成pH调节协议")

View File

@@ -22,7 +22,7 @@ def parse_time_input(time_input: Union[str, float]) -> float:
"""
if isinstance(time_input, (int, float)):
debug_print(f"⏱️ 时间输入为数字: {time_input}s ✨")
return float(time_input)
return float(time_input) # 🔧 确保返回float
if not time_input or not str(time_input).strip():
debug_print(f"⚠️ 时间输入为空,使用默认值: 180s (3分钟) 🕐")
@@ -48,7 +48,7 @@ def parse_time_input(time_input: Union[str, float]) -> float:
try:
value = float(time_str)
debug_print(f"✅ 时间解析成功: {time_str}{value}s无单位默认秒")
return value
return float(value) # 🔧 确保返回float
except ValueError:
debug_print(f"❌ 无法解析时间: '{time_str}'使用默认值180s (3分钟) 😅")
return 180.0
@@ -70,7 +70,7 @@ def parse_time_input(time_input: Union[str, float]) -> float:
time_sec = value # 已经是s
debug_print(f"🕐 时间转换: {value}s → {time_sec}s (已是秒) ⏰")
return time_sec
return float(time_sec) # 🔧 确保返回float
def find_rotavap_device(G: nx.DiGraph, vessel: str = None) -> Optional[str]:
"""
@@ -389,12 +389,12 @@ def generate_evaporate_protocol(
"device_id": rotavap_device,
"action_name": "evaporate",
"action_kwargs": {
"vessel": target_vessel, # 使用 target_vessel
"pressure": pressure,
"temp": temp,
"time": final_time,
"stir_speed": stir_speed,
"solvent": solvent
"vessel": target_vessel,
"pressure": float(pressure),
"temp": float(temp),
"time": float(final_time), # 🔧 强制转换为float类型
"stir_speed": float(stir_speed),
"solvent": str(solvent)
}
}
action_sequence.append(evaporate_action)

View File

@@ -170,33 +170,94 @@ def find_solvent_vessel(G: nx.DiGraph, solvent: str) -> str:
debug_print(f" 🎉 通过名称匹配找到容器: {vessel_name}")
return vessel_name
# 第二步:通过模糊匹配
# 第二步:通过模糊匹配节点ID和名称
debug_print(" 🔍 步骤2: 模糊名称匹配...")
for node_id in G.nodes():
if G.nodes[node_id].get('type') == 'container':
node_name = G.nodes[node_id].get('name', '').lower()
if solvent.lower() in node_id.lower() or solvent.lower() in node_name:
debug_print(f" 🎉 通过模糊匹配找到容器: {node_id}")
debug_print(f" 🎉 通过模糊匹配找到容器: {node_id} (名称: {node_name})")
return node_id
# 第三步:通过液体类型匹配
debug_print(" 🧪 步骤3: 液体类型匹配...")
# 第三步:通过配置中的试剂信息匹配
debug_print(" 🧪 步骤3: 配置试剂信息匹配...")
for node_id in G.nodes():
if G.nodes[node_id].get('type') == 'container':
# 检查 config 中的 reagent 字段
node_config = G.nodes[node_id].get('config', {})
config_reagent = node_config.get('reagent', '').lower()
if config_reagent and solvent.lower() == config_reagent:
debug_print(f" 🎉 通过config.reagent匹配找到容器: {node_id} (试剂: {config_reagent}) ✨")
return node_id
# 第四步:通过数据中的试剂信息匹配
debug_print(" 🧪 步骤4: 数据试剂信息匹配...")
for node_id in G.nodes():
if G.nodes[node_id].get('type') == 'container':
vessel_data = G.nodes[node_id].get('data', {})
liquids = vessel_data.get('liquid', [])
# 检查 data 中的 reagent_name 字段
reagent_name = vessel_data.get('reagent_name', '').lower()
if reagent_name and solvent.lower() == reagent_name:
debug_print(f" 🎉 通过data.reagent_name匹配找到容器: {node_id} (试剂: {reagent_name}) ✨")
return node_id
# 检查 data 中的液体信息
liquids = vessel_data.get('liquid', [])
for liquid in liquids:
if isinstance(liquid, dict):
liquid_type = (liquid.get('liquid_type') or liquid.get('name', '')).lower()
reagent_name = vessel_data.get('reagent_name', '').lower()
if solvent.lower() in liquid_type or solvent.lower() in reagent_name:
debug_print(f" 🎉 通过液体类型匹配找到容器: {node_id}")
if solvent.lower() in liquid_type:
debug_print(f" 🎉 通过液体类型匹配找到容器: {node_id} (液体类型: {liquid_type})")
return node_id
# 第五步:部分匹配(如果前面都没找到)
debug_print(" 🔍 步骤5: 部分匹配...")
for node_id in G.nodes():
if G.nodes[node_id].get('type') == 'container':
node_config = G.nodes[node_id].get('config', {})
node_data = G.nodes[node_id].get('data', {})
node_name = G.nodes[node_id].get('name', '').lower()
config_reagent = node_config.get('reagent', '').lower()
data_reagent = node_data.get('reagent_name', '').lower()
# 检查是否包含溶剂名称
if (solvent.lower() in config_reagent or
solvent.lower() in data_reagent or
solvent.lower() in node_name or
solvent.lower() in node_id.lower()):
debug_print(f" 🎉 通过部分匹配找到容器: {node_id}")
debug_print(f" - 节点名称: {node_name}")
debug_print(f" - 配置试剂: {config_reagent}")
debug_print(f" - 数据试剂: {data_reagent}")
return node_id
# 调试信息:列出所有容器
debug_print(" 🔎 调试信息:列出所有容器...")
container_list = []
for node_id in G.nodes():
if G.nodes[node_id].get('type') == 'container':
node_config = G.nodes[node_id].get('config', {})
node_data = G.nodes[node_id].get('data', {})
node_name = G.nodes[node_id].get('name', '')
container_info = {
'id': node_id,
'name': node_name,
'config_reagent': node_config.get('reagent', ''),
'data_reagent': node_data.get('reagent_name', '')
}
container_list.append(container_info)
debug_print(f" - 容器: {node_id}, 名称: {node_name}, config试剂: {node_config.get('reagent', '')}, data试剂: {node_data.get('reagent_name', '')}")
debug_print(f"❌ 找不到溶剂 '{solvent}' 对应的容器 😭")
debug_print(f"🔍 查找的溶剂: '{solvent}' (小写: '{solvent.lower()}')")
debug_print(f"📊 总共发现 {len(container_list)} 个容器")
raise ValueError(f"找不到溶剂 '{solvent}' 对应的容器")

View File

@@ -70,11 +70,32 @@ class VirtualMultiwayValve:
command: 目标位置 (0-8) 或位置字符串
0: transfer pump位置
1-8: 其他设备位置
'default': 默认位置0号位
"""
try:
# 如果是字符串形式的位置,先转换为数字
# 🔧 处理特殊字符串命令
if isinstance(command, str):
pos = int(command)
command_lower = command.lower().strip()
# 处理特殊命令
if command_lower in ['default', 'pump', 'transfer_pump', 'home']:
pos = 0 # 默认位置为0号位transfer pump
self.logger.info(f"🔧 特殊命令 '{command}' 映射到位置 {pos}")
elif command_lower in ['open']:
pos = 0 # open命令也映射到0号位
self.logger.info(f"🔧 OPEN命令映射到位置 {pos}")
elif command_lower in ['close', 'closed']:
# 关闭命令保持当前位置
pos = self._current_position
self.logger.info(f"🔧 CLOSE命令保持当前位置 {pos}")
else:
# 尝试转换为数字
try:
pos = int(command)
except ValueError:
error_msg = f"无法识别的命令: '{command}'"
self.logger.error(f"{error_msg}")
raise ValueError(error_msg)
else:
pos = int(command)

View File

@@ -88,6 +88,20 @@ class VirtualRotavap:
) -> bool:
"""Execute evaporate action - 简化版 🌪️"""
# 🔧 新增确保time参数是数值类型
if isinstance(time, str):
try:
time = float(time)
except ValueError:
self.logger.error(f"❌ 无法转换时间参数 '{time}' 为数值使用默认值180.0秒")
time = 180.0
elif not isinstance(time, (int, float)):
self.logger.error(f"❌ 时间参数类型无效: {type(time)}使用默认值180.0秒")
time = 180.0
# 确保time是float类型
time = float(time)
# 🔧 简化处理如果vessel就是设备自己直接操作
if vessel == self.device_id:
debug_print(f"🎯 在设备 {self.device_id} 上直接执行蒸发操作")
@@ -158,7 +172,7 @@ class VirtualRotavap:
})
return False
# 开始蒸发
# 开始蒸发 - 🔧 现在time已经确保是float类型
self.logger.info(f"🚀 启动蒸发程序! 预计用时 {time/60:.1f}分钟 ⏱️")
self.data.update({

View File

@@ -5993,3 +5993,176 @@ virtual_vacuum_pump:
- status
type: object
version: 0.0.1
virtual_solid_dispenser:
class:
action_value_mappings:
auto-cleanup:
feedback: {}
goal: {}
goal_default: {}
handles: []
result: {}
schema:
description: cleanup的参数schema
properties:
feedback: {}
goal:
properties: {}
type: object
result: {}
required:
- goal
title: cleanup参数
type: object
type: UniLabJsonCommandAsync
auto-initialize:
feedback: {}
goal: {}
goal_default: {}
handles: []
result: {}
schema:
description: initialize的参数schema
properties:
feedback: {}
goal:
properties: {}
type: object
result: {}
required:
- goal
title: initialize参数
type: object
type: UniLabJsonCommandAsync
add_solid:
feedback:
current_status: status
progress: progress
goal:
vessel: vessel
reagent: reagent
mass: mass
mol: mol
purpose: purpose
event: event
rate_spec: rate_spec
equiv: equiv
ratio: ratio
goal_default:
vessel: ''
reagent: ''
mass: ''
mol: ''
purpose: ''
event: ''
rate_spec: ''
equiv: ''
ratio: ''
handles: []
result:
success: success
message: message
return_info: return_info
schema:
description: ''
properties:
feedback:
properties:
current_status:
type: string
progress:
type: number
type: object
goal:
properties:
vessel:
type: string
reagent:
type: string
mass:
type: string
mol:
type: string
purpose:
type: string
event:
type: string
rate_spec:
type: string
equiv:
type: string
ratio:
type: string
type: object
result:
properties:
success:
type: boolean
message:
type: string
return_info:
type: string
type: object
required:
- goal
title: AddSolid
type: object
type: Add # 🔧 使用 Add action type
module: unilabos.devices.virtual.virtual_solid_dispenser:VirtualSolidDispenser
status_types:
status: str
current_reagent: str
dispensed_amount: float
total_operations: int
type: python
description: Virtual Solid Dispenser for Add Protocol Testing - supports mass and molar additions
handles:
- data_key: solid_out
data_source: executor
data_type: resource
description: 固体试剂输出口
handler_key: SolidOut
io_type: source
label: SolidOut
side: SOUTH
- data_key: solid_in
data_source: handle
data_type: resource
description: 固体试剂输入口(连接试剂瓶)
handler_key: SolidIn
io_type: target
label: SolidIn
side: NORTH
icon: ''
init_param_schema:
config:
properties:
max_capacity:
default: 100.0
type: number
precision:
default: 0.001
type: number
config:
type: object
device_id:
type: string
required: []
type: object
data:
properties:
status:
type: string
current_reagent:
type: string
dispensed_amount:
type: number
total_operations:
type: integer
required:
- status
- current_reagent
- dispensed_amount
- total_operations
type: object
version: 0.0.1