Files
Uni-Lab-OS/docs/developer_guide/action_includes.md
Xuwznln 9aeffebde1 0.10.7 Update (#101)
* Cleanup registry to be easy-understanding (#76)

* delete deprecated mock devices

* rename categories

* combine chromatographic devices

* rename rviz simulation nodes

* organic virtual devices

* parse vessel_id

* run registry completion before merge

---------

Co-authored-by: Xuwznln <18435084+Xuwznln@users.noreply.github.com>

* fix: workstation handlers and vessel_id parsing

* fix: working dir error when input config path
feat: report publish topic when error

* modify default discovery_interval to 15s

* feat: add trace log level

* feat: 添加ChinWe设备控制类,支持串口通信和电机控制功能 (#79)

* fix: drop_tips not using auto resource select

* fix: discard_tips error

* fix: discard_tips

* fix: prcxi_res

* add: prcxi res
fix: startup slow

* feat: workstation example

* fix pumps and liquid_handler handle

* feat: 优化protocol node节点运行日志

* fix all protocol_compilers and remove deprecated devices

* feat: 新增use_remote_resource参数

* fix and remove redundant info

* bugfixes on organic protocols

* fix filter protocol

* fix protocol node

* 临时兼容错误的driver写法

* fix: prcxi import error

* use call_async in all service to avoid deadlock

* fix: figure_resource

* Update recipe.yaml

* add workstation template and battery example

* feat: add sk & ak

* update workstation base

* Create workstation_architecture.md

* refactor: workstation_base 重构为仅含业务逻辑,通信和子设备管理交给 ProtocolNode

* refactor: ProtocolNode→WorkstationNode

* Add:msgs.action (#83)

* update: Workstation dev 将版本号从 0.10.3 更新为 0.10.4 (#84)

* Add:msgs.action

* update: 将版本号从 0.10.3 更新为 0.10.4

* simplify resource system

* uncompleted refactor

* example for use WorkstationBase

* feat: websocket

* feat: websocket test

* feat: workstation example

* feat: action status

* fix: station自己的方法注册错误

* fix: 还原protocol node处理方法

* fix: build

* fix: missing job_id key

* ws test version 1

* ws test version 2

* ws protocol

* 增加物料关系上传日志

* 增加物料关系上传日志

* 修正物料关系上传

* 修复工站的tracker实例追踪失效问题

* 增加handle检测,增加material edge关系上传

* 修复event loop错误

* 修复edge上报错误

* 修复async错误

* 更新schema的title字段

* 主机节点信息等支持自动刷新

* 注册表编辑器

* 修复status密集发送时,消息出错

* 增加addr参数

* fix: addr param

* fix: addr param

* 取消labid 和 强制config输入

* Add action definitions for LiquidHandlerSetGroup and LiquidHandlerTransferGroup

- Created LiquidHandlerSetGroup.action with fields for group name, wells, and volumes.
- Created LiquidHandlerTransferGroup.action with fields for source and target group names and unit volume.
- Both actions include response fields for return information and success status.

* Add LiquidHandlerSetGroup and LiquidHandlerTransferGroup actions to CMakeLists

* Add set_group and transfer_group methods to PRCXI9300Handler and update liquid_handler.yaml

* result_info改为字典类型

* 新增uat的地址替换

* runze multiple pump support

(cherry picked from commit 49354fcf39)

* remove runze multiple software obtainer

(cherry picked from commit 8bcc92a394)

* support multiple backbone

(cherry picked from commit 4771ff2347)

* Update runze pump format

* Correct runze multiple backbone

* Update runze_multiple_backbone

* Correct runze pump multiple receive method.

* Correct runze pump multiple receive method.

* 对于PRCXI9320的transfer_group,一对多和多对多

* 移除MQTT,更新launch文档,提供注册表示例文件,更新到0.10.5

* fix import error

* fix dupe upload registry

* refactor ws client

* add server timeout

* Fix: run-column with correct vessel id (#86)

* fix run_column

* Update run_column_protocol.py

(cherry picked from commit e5aa4d940a)

* resource_update use resource_add

* 新增版位推荐功能

* 重新规定了版位推荐的入参

* update registry with nested obj

* fix protocol node log_message, added create_resource return value

* fix protocol node log_message, added create_resource return value

* try fix add protocol

* fix resource_add

* 修复移液站错误的aspirate注册表

* Feature/xprbalance-zhida (#80)

* feat(devices): add Zhida GC/MS pretreatment automation workstation

* feat(devices): add mettler_toledo xpr balance

* balance

* 重新补全zhida注册表

* PRCXI9320 json

* PRCXI9320 json

* PRCXI9320 json

* fix resource download

* remove class for resource

* bump version to 0.10.6

* 更新所有注册表

* 修复protocolnode的兼容性

* 修复protocolnode的兼容性

* Update install md

* Add Defaultlayout

* 更新物料接口

* fix dict to tree/nested-dict converter

* coin_cell_station draft

* refactor: rename "station_resource" to "deck"

* add standardized BIOYOND resources: bottle_carrier, bottle

* refactor and add BIOYOND resources tests

* add BIOYOND deck assignment and pass all tests

* fix: update resource with correct structure; remove deprecated liquid_handler set_group action

* feat: 将新威电池测试系统驱动与配置文件并入 workstation_dev_YB2 (#92)

* feat: 新威电池测试系统驱动与注册文件

* feat: bring neware driver & battery.json into workstation_dev_YB2

* add bioyond studio draft

* bioyond station with communication init and resource sync

* fix bioyond station and registry

* fix: update resource with correct structure; remove deprecated liquid_handler set_group action

* frontend_docs

* create/update resources with POST/PUT for big amount/ small amount data

* create/update resources with POST/PUT for big amount/ small amount data

* refactor: add itemized_carrier instead of carrier consists of ResourceHolder

* create warehouse by factory func

* update bioyond launch json

* add child_size for itemized_carrier

* fix bioyond resource io

* Workstation templates: Resources and its CRUD, and workstation tasks (#95)

* coin_cell_station draft

* refactor: rename "station_resource" to "deck"

* add standardized BIOYOND resources: bottle_carrier, bottle

* refactor and add BIOYOND resources tests

* add BIOYOND deck assignment and pass all tests

* fix: update resource with correct structure; remove deprecated liquid_handler set_group action

* feat: 将新威电池测试系统驱动与配置文件并入 workstation_dev_YB2 (#92)

* feat: 新威电池测试系统驱动与注册文件

* feat: bring neware driver & battery.json into workstation_dev_YB2

* add bioyond studio draft

* bioyond station with communication init and resource sync

* fix bioyond station and registry

* create/update resources with POST/PUT for big amount/ small amount data

* refactor: add itemized_carrier instead of carrier consists of ResourceHolder

* create warehouse by factory func

* update bioyond launch json

* add child_size for itemized_carrier

* fix bioyond resource io

---------

Co-authored-by: h840473807 <47357934+h840473807@users.noreply.github.com>
Co-authored-by: Xie Qiming <97236197+Andy6M@users.noreply.github.com>

* 更新物料接口

* Workstation dev yb2 (#100)

* Refactor and extend reaction station action messages

* Refactor dispensing station tasks to enhance parameter clarity and add batch processing capabilities

- Updated `create_90_10_vial_feeding_task` to include detailed parameters for 90%/10% vial feeding, improving clarity and usability.
- Introduced `create_batch_90_10_vial_feeding_task` for batch processing of 90%/10% vial feeding tasks with JSON formatted input.
- Added `create_batch_diamine_solution_task` for batch preparation of diamine solution, also utilizing JSON formatted input.
- Refined `create_diamine_solution_task` to include additional parameters for better task configuration.
- Enhanced schema descriptions and default values for improved user guidance.

* 修复to_plr_resources

* add update remove

* 支持选择器注册表自动生成
支持转运物料

* 修复资源添加

* 修复transfer_resource_to_another生成

* 更新transfer_resource_to_another参数,支持spot入参

* 新增test_resource动作

* fix host_node error

* fix host_node test_resource error

* fix host_node test_resource error

* 过滤本地动作

* 移动内部action以兼容host node

* 修复同步任务报错不显示的bug

* feat: 允许返回非本节点物料,后面可以通过decoration进行区分,就不进行warning了

* update todo

* modify bioyond/plr converter, bioyond resource registry, and tests

* pass the tests

* update todo

* add conda-pack-build.yml

* add auto install script for conda-pack-build.yml

(cherry picked from commit 172599adcf)

* update conda-pack-build.yml

* update conda-pack-build.yml

* update conda-pack-build.yml

* update conda-pack-build.yml

* update conda-pack-build.yml

* Add version in __init__.py
Update conda-pack-build.yml
Add create_zip_archive.py

* Update conda-pack-build.yml

* Update conda-pack-build.yml (with mamba)

* Update conda-pack-build.yml

* Fix FileNotFoundError

* Try fix 'charmap' codec can't encode characters in position 16-23: character maps to <undefined>

* Fix unilabos msgs search error

* Fix environment_check.py

* Update recipe.yaml

* Update registry. Update uuid loop figure method. Update install docs.

* Fix nested conda pack

* Fix one-key installation path error

* Bump version to 0.10.7

* Workshop bj (#99)

* Add LaiYu Liquid device integration and tests

Introduce LaiYu Liquid device implementation, including backend, controllers, drivers, configuration, and resource files. Add hardware connection, tip pickup, and simplified test scripts, as well as experiment and registry configuration for LaiYu Liquid. Documentation and .gitignore for the device are also included.

* feat(LaiYu_Liquid): 重构设备模块结构并添加硬件文档

refactor: 重新组织LaiYu_Liquid模块目录结构
docs: 添加SOPA移液器和步进电机控制指令文档
fix: 修正设备配置中的最大体积默认值
test: 新增工作台配置测试用例
chore: 删除过时的测试脚本和配置文件

* add

* 重构: 将 LaiYu_Liquid.py 重命名为 laiyu_liquid_main.py 并更新所有导入引用

- 使用 git mv 将 LaiYu_Liquid.py 重命名为 laiyu_liquid_main.py
- 更新所有相关文件中的导入引用
- 保持代码功能不变,仅改善命名一致性
- 测试确认所有导入正常工作

* 修复: 在 core/__init__.py 中添加 LaiYuLiquidBackend 导出

- 添加 LaiYuLiquidBackend 到导入列表
- 添加 LaiYuLiquidBackend 到 __all__ 导出列表
- 确保所有主要类都可以正确导入

* 修复大小写文件夹名字

* 电池装配工站二次开发教程(带目录)上传至dev (#94)

* 电池装配工站二次开发教程

* Update intro.md

* 物料教程

* 更新物料教程,json格式注释

* Update prcxi driver & fix transfer_liquid mix_times (#90)

* Update prcxi driver & fix transfer_liquid mix_times

* fix: correct mix_times type

* Update liquid_handler registry

* test: prcxi.py

* Update registry from pr

* fix ony-key script not exist

* clean files

---------

Co-authored-by: Junhan Chang <changjh@dp.tech>
Co-authored-by: ZiWei <131428629+ZiWei09@users.noreply.github.com>
Co-authored-by: Guangxin Zhang <guangxin.zhang.bio@gmail.com>
Co-authored-by: Xie Qiming <97236197+Andy6M@users.noreply.github.com>
Co-authored-by: h840473807 <47357934+h840473807@users.noreply.github.com>
Co-authored-by: LccLink <1951855008@qq.com>
Co-authored-by: lixinyu1011 <61094742+lixinyu1011@users.noreply.github.com>
Co-authored-by: shiyubo0410 <shiyubo@dp.tech>
2025-10-12 23:34:26 +08:00

16 KiB
Raw Blame History

简单单变量动作函数

SendCmd

:language: yaml

StrSingleInput

:language: yaml

IntSingleInput

:language: yaml

FloatSingleInput

:language: yaml

Point3DSeparateInput

:language: yaml

Wait

:language: yaml

常量有机化学操作

Uni-Lab 常量有机化学指令集多数来自 XDL,包含有机合成实验中常见的操作,如加热、搅拌、冷却等。

Clean

:language: yaml

EvacuateAndRefill

:language: yaml

Evaporate

:language: yaml

HeatChill

:language: yaml

HeatChillStart

:language: yaml

HeatChillStop

:language: yaml

PumpTransfer

:language: yaml

Separate

:language: yaml

Stir

:language: yaml

Add

:language: yaml

AddSolid

:language: yaml

AdjustPH

:language: yaml

Centrifuge

:language: yaml

CleanVessel

:language: yaml

Crystallize

:language: yaml

Dissolve

:language: yaml

Dry

:language: yaml

Filter

:language: yaml

FilterThrough

:language: yaml

Hydrogenate

:language: yaml

Purge

:language: yaml

Recrystallize

:language: yaml

RunColumn

:language: yaml

StartPurge

:language: yaml

StartStir

:language: yaml

StopPurge

:language: yaml

StopStir

:language: yaml

Transfer

:language: yaml

WashSolid

:language: yaml

移液工作站及相关生物自动化设备操作

Uni-Lab 生物操作指令集多数来自 PyLabRobot,包含生物实验中常见的操作,如移液、混匀、离心等。

LiquidHandlerAspirate

:language: yaml

LiquidHandlerDiscardTips

:language: yaml

LiquidHandlerDispense

:language: yaml

LiquidHandlerDropTips

:language: yaml

LiquidHandlerDropTips96

:language: yaml

LiquidHandlerMoveLid

:language: yaml

LiquidHandlerMovePlate

:language: yaml

LiquidHandlerMoveResource

:language: yaml

LiquidHandlerPickUpTips

:language: yaml

LiquidHandlerPickUpTips96

:language: yaml

LiquidHandlerReturnTips

:language: yaml

LiquidHandlerReturnTips96

:language: yaml

LiquidHandlerStamp

:language: yaml

LiquidHandlerTransfer

:language: yaml

LiquidHandlerAdd

:language: yaml

LiquidHandlerIncubateBiomek

:language: yaml

LiquidHandlerMix

:language: yaml

LiquidHandlerMoveBiomek

:language: yaml

LiquidHandlerMoveTo

:language: yaml

LiquidHandlerOscillateBiomek

:language: yaml

LiquidHandlerProtocolCreation

:language: yaml

LiquidHandlerRemove

:language: yaml

LiquidHandlerSetGroup

:language: yaml

LiquidHandlerSetLiquid

:language: yaml

LiquidHandlerSetTipRack

:language: yaml

LiquidHandlerTransferBiomek

:language: yaml

LiquidHandlerTransferGroup

:language: yaml

多工作站及小车运行、物料转移

AGVTransfer

:language: yaml

WorkStationRun

:language: yaml

ResetHandling

:language: yaml

ResourceCreateFromOuter

:language: yaml

ResourceCreateFromOuterEasy

:language: yaml

SetPumpPosition

:language: yaml

固体分配与处理设备操作

SolidDispenseAddPowderTube

:language: yaml

其他设备操作

EmptyIn

:language: yaml

机械臂、夹爪等机器人设备

Uni-Lab 机械臂、机器人、夹爪和导航指令集沿用 ROS2 的 control_msgsnav2_msgs

FollowJointTrajectory

# The trajectory for all revolute, continuous or prismatic joints
trajectory_msgs/JointTrajectory trajectory
# The trajectory for all planar or floating joints (i.e. individual joints with more than one DOF)
trajectory_msgs/MultiDOFJointTrajectory multi_dof_trajectory

# Tolerances for the trajectory.  If the measured joint values fall
# outside the tolerances the trajectory goal is aborted.  Any
# tolerances that are not specified (by being omitted or set to 0) are
# set to the defaults for the action server (often taken from the
# parameter server).

# Tolerances applied to the joints as the trajectory is executed.  If
# violated, the goal aborts with error_code set to
# PATH_TOLERANCE_VIOLATED.
JointTolerance[] path_tolerance
JointComponentTolerance[] component_path_tolerance

# To report success, the joints must be within goal_tolerance of the
# final trajectory value.  The goal must be achieved by time the
# trajectory ends plus goal_time_tolerance.  (goal_time_tolerance
# allows some leeway in time, so that the trajectory goal can still
# succeed even if the joints reach the goal some time after the
# precise end time of the trajectory).
#
# If the joints are not within goal_tolerance after "trajectory finish
# time" + goal_time_tolerance, the goal aborts with error_code set to
# GOAL_TOLERANCE_VIOLATED
JointTolerance[] goal_tolerance
JointComponentTolerance[] component_goal_tolerance
builtin_interfaces/Duration goal_time_tolerance

---
int32 error_code
int32 SUCCESSFUL = 0
int32 INVALID_GOAL = -1
int32 INVALID_JOINTS = -2
int32 OLD_HEADER_TIMESTAMP = -3
int32 PATH_TOLERANCE_VIOLATED = -4
int32 GOAL_TOLERANCE_VIOLATED = -5

# Human readable description of the error code. Contains complementary
# information that is especially useful when execution fails, for instance:
# - INVALID_GOAL: The reason for the invalid goal (e.g., the requested
#   trajectory is in the past).
# - INVALID_JOINTS: The mismatch between the expected controller joints
#   and those provided in the goal.
# - PATH_TOLERANCE_VIOLATED and GOAL_TOLERANCE_VIOLATED: Which joint
#   violated which tolerance, and by how much.
string error_string

---
std_msgs/Header header
string[] joint_names
trajectory_msgs/JointTrajectoryPoint desired
trajectory_msgs/JointTrajectoryPoint actual
trajectory_msgs/JointTrajectoryPoint error

string[] multi_dof_joint_names
trajectory_msgs/MultiDOFJointTrajectoryPoint multi_dof_desired
trajectory_msgs/MultiDOFJointTrajectoryPoint multi_dof_actual
trajectory_msgs/MultiDOFJointTrajectoryPoint multi_dof_error


GripperCommand

GripperCommand command
---
float64 position  # The current gripper gap size (in meters)
float64 effort    # The current effort exerted (in Newtons)
bool stalled      # True iff the gripper is exerting max effort and not moving
bool reached_goal # True iff the gripper position has reached the commanded setpoint
---
float64 position  # The current gripper gap size (in meters)
float64 effort    # The current effort exerted (in Newtons)
bool stalled      # True iff the gripper is exerting max effort and not moving
bool reached_goal # True iff the gripper position has reached the commanded setpoint


JointTrajectory

trajectory_msgs/JointTrajectory trajectory
---

---

PointHead

geometry_msgs/PointStamped target
geometry_msgs/Vector3 pointing_axis
string pointing_frame
builtin_interfaces/Duration min_duration
float64 max_velocity
---

---
float64 pointing_angle_error

SingleJointPosition

float64 position
builtin_interfaces/Duration min_duration
float64 max_velocity
---

---
std_msgs/Header header
float64 position
float64 velocity
float64 error

AssistedTeleop

#goal definition
builtin_interfaces/Duration time_allowance
---
#result definition
builtin_interfaces/Duration total_elapsed_time
---
#feedback
builtin_interfaces/Duration current_teleop_duration

BackUp

#goal definition
geometry_msgs/Point target
float32 speed
builtin_interfaces/Duration time_allowance
---
#result definition
builtin_interfaces/Duration total_elapsed_time
---
#feedback definition
float32 distance_traveled

ComputePathThroughPoses

#goal definition
geometry_msgs/PoseStamped[] goals
geometry_msgs/PoseStamped start
string planner_id
bool use_start # If false, use current robot pose as path start, if true, use start above instead
---
#result definition
nav_msgs/Path path
builtin_interfaces/Duration planning_time
---
#feedback definition

ComputePathToPose

#goal definition
geometry_msgs/PoseStamped goal
geometry_msgs/PoseStamped start
string planner_id
bool use_start # If false, use current robot pose as path start, if true, use start above instead
---
#result definition
nav_msgs/Path path
builtin_interfaces/Duration planning_time
---
#feedback definition

DriveOnHeading

#goal definition
geometry_msgs/Point target
float32 speed
builtin_interfaces/Duration time_allowance
---
#result definition
builtin_interfaces/Duration total_elapsed_time
---
#feedback definition
float32 distance_traveled

DummyBehavior

#goal definition
std_msgs/String command
---
#result definition
builtin_interfaces/Duration total_elapsed_time
---
#feedback definition

FollowPath

#goal definition
nav_msgs/Path path
string controller_id
string goal_checker_id
---
#result definition
std_msgs/Empty result
---
#feedback definition
float32 distance_to_goal
float32 speed

FollowWaypoints

#goal definition
geometry_msgs/PoseStamped[] poses
---
#result definition
int32[] missed_waypoints
---
#feedback definition
uint32 current_waypoint

NavigateThroughPoses

#goal definition
geometry_msgs/PoseStamped[] poses
string behavior_tree
---
#result definition
std_msgs/Empty result
---
#feedback definition
geometry_msgs/PoseStamped current_pose
builtin_interfaces/Duration navigation_time
builtin_interfaces/Duration estimated_time_remaining
int16 number_of_recoveries
float32 distance_remaining
int16 number_of_poses_remaining

NavigateToPose

#goal definition
geometry_msgs/PoseStamped pose
string behavior_tree
---
#result definition
std_msgs/Empty result
---
#feedback definition
geometry_msgs/PoseStamped current_pose
builtin_interfaces/Duration navigation_time
builtin_interfaces/Duration estimated_time_remaining
int16 number_of_recoveries
float32 distance_remaining

SmoothPath

#goal definition
nav_msgs/Path path
string smoother_id
builtin_interfaces/Duration max_smoothing_duration
bool check_for_collisions
---
#result definition
nav_msgs/Path path
builtin_interfaces/Duration smoothing_duration
bool was_completed
---
#feedback definition

Spin

#goal definition
float32 target_yaw
builtin_interfaces/Duration time_allowance
---
#result definition
builtin_interfaces/Duration total_elapsed_time
---
#feedback definition
float32 angular_distance_traveled

Wait

#goal definition
builtin_interfaces/Duration time
---
#result definition
builtin_interfaces/Duration total_elapsed_time
---
#feedback definition
builtin_interfaces/Duration time_left