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* Cleanup registry to be easy-understanding (#76) * delete deprecated mock devices * rename categories * combine chromatographic devices * rename rviz simulation nodes * organic virtual devices * parse vessel_id * run registry completion before merge --------- Co-authored-by: Xuwznln <18435084+Xuwznln@users.noreply.github.com> * fix: workstation handlers and vessel_id parsing * fix: working dir error when input config path feat: report publish topic when error * modify default discovery_interval to 15s * feat: add trace log level * feat: 添加ChinWe设备控制类,支持串口通信和电机控制功能 (#79) * fix: drop_tips not using auto resource select * fix: discard_tips error * fix: discard_tips * fix: prcxi_res * add: prcxi res fix: startup slow * feat: workstation example * fix pumps and liquid_handler handle * feat: 优化protocol node节点运行日志 * fix all protocol_compilers and remove deprecated devices * feat: 新增use_remote_resource参数 * fix and remove redundant info * bugfixes on organic protocols * fix filter protocol * fix protocol node * 临时兼容错误的driver写法 * fix: prcxi import error * use call_async in all service to avoid deadlock * fix: figure_resource * Update recipe.yaml * add workstation template and battery example * feat: add sk & ak * update workstation base * Create workstation_architecture.md * refactor: workstation_base 重构为仅含业务逻辑,通信和子设备管理交给 ProtocolNode * refactor: ProtocolNode→WorkstationNode * Add:msgs.action (#83) * update: Workstation dev 将版本号从 0.10.3 更新为 0.10.4 (#84) * Add:msgs.action * update: 将版本号从 0.10.3 更新为 0.10.4 * simplify resource system * uncompleted refactor * example for use WorkstationBase * feat: websocket * feat: websocket test * feat: workstation example * feat: action status * fix: station自己的方法注册错误 * fix: 还原protocol node处理方法 * fix: build * fix: missing job_id key * ws test version 1 * ws test version 2 * ws protocol * 增加物料关系上传日志 * 增加物料关系上传日志 * 修正物料关系上传 * 修复工站的tracker实例追踪失效问题 * 增加handle检测,增加material edge关系上传 * 修复event loop错误 * 修复edge上报错误 * 修复async错误 * 更新schema的title字段 * 主机节点信息等支持自动刷新 * 注册表编辑器 * 修复status密集发送时,消息出错 * 增加addr参数 * fix: addr param * fix: addr param * 取消labid 和 强制config输入 * Add action definitions for LiquidHandlerSetGroup and LiquidHandlerTransferGroup - Created LiquidHandlerSetGroup.action with fields for group name, wells, and volumes. - Created LiquidHandlerTransferGroup.action with fields for source and target group names and unit volume. - Both actions include response fields for return information and success status. * Add LiquidHandlerSetGroup and LiquidHandlerTransferGroup actions to CMakeLists * Add set_group and transfer_group methods to PRCXI9300Handler and update liquid_handler.yaml * result_info改为字典类型 * 新增uat的地址替换 * runze multiple pump support (cherry picked from commit49354fcf39) * remove runze multiple software obtainer (cherry picked from commit8bcc92a394) * support multiple backbone (cherry picked from commit4771ff2347) * Update runze pump format * Correct runze multiple backbone * Update runze_multiple_backbone * Correct runze pump multiple receive method. * Correct runze pump multiple receive method. * 对于PRCXI9320的transfer_group,一对多和多对多 * 移除MQTT,更新launch文档,提供注册表示例文件,更新到0.10.5 * fix import error * fix dupe upload registry * refactor ws client * add server timeout * Fix: run-column with correct vessel id (#86) * fix run_column * Update run_column_protocol.py (cherry picked from commite5aa4d940a) * resource_update use resource_add * 新增版位推荐功能 * 重新规定了版位推荐的入参 * update registry with nested obj * fix protocol node log_message, added create_resource return value * fix protocol node log_message, added create_resource return value * try fix add protocol * fix resource_add * 修复移液站错误的aspirate注册表 * Feature/xprbalance-zhida (#80) * feat(devices): add Zhida GC/MS pretreatment automation workstation * feat(devices): add mettler_toledo xpr balance * balance * 重新补全zhida注册表 * PRCXI9320 json * PRCXI9320 json * PRCXI9320 json * fix resource download * remove class for resource * bump version to 0.10.6 * 更新所有注册表 * 修复protocolnode的兼容性 * 修复protocolnode的兼容性 * Update install md * Add Defaultlayout * 更新物料接口 * fix dict to tree/nested-dict converter * coin_cell_station draft * refactor: rename "station_resource" to "deck" * add standardized BIOYOND resources: bottle_carrier, bottle * refactor and add BIOYOND resources tests * add BIOYOND deck assignment and pass all tests * fix: update resource with correct structure; remove deprecated liquid_handler set_group action * feat: 将新威电池测试系统驱动与配置文件并入 workstation_dev_YB2 (#92) * feat: 新威电池测试系统驱动与注册文件 * feat: bring neware driver & battery.json into workstation_dev_YB2 * add bioyond studio draft * bioyond station with communication init and resource sync * fix bioyond station and registry * fix: update resource with correct structure; remove deprecated liquid_handler set_group action * frontend_docs * create/update resources with POST/PUT for big amount/ small amount data * create/update resources with POST/PUT for big amount/ small amount data * refactor: add itemized_carrier instead of carrier consists of ResourceHolder * create warehouse by factory func * update bioyond launch json * add child_size for itemized_carrier * fix bioyond resource io * Workstation templates: Resources and its CRUD, and workstation tasks (#95) * coin_cell_station draft * refactor: rename "station_resource" to "deck" * add standardized BIOYOND resources: bottle_carrier, bottle * refactor and add BIOYOND resources tests * add BIOYOND deck assignment and pass all tests * fix: update resource with correct structure; remove deprecated liquid_handler set_group action * feat: 将新威电池测试系统驱动与配置文件并入 workstation_dev_YB2 (#92) * feat: 新威电池测试系统驱动与注册文件 * feat: bring neware driver & battery.json into workstation_dev_YB2 * add bioyond studio draft * bioyond station with communication init and resource sync * fix bioyond station and registry * create/update resources with POST/PUT for big amount/ small amount data * refactor: add itemized_carrier instead of carrier consists of ResourceHolder * create warehouse by factory func * update bioyond launch json * add child_size for itemized_carrier * fix bioyond resource io --------- Co-authored-by: h840473807 <47357934+h840473807@users.noreply.github.com> Co-authored-by: Xie Qiming <97236197+Andy6M@users.noreply.github.com> * 更新物料接口 * Workstation dev yb2 (#100) * Refactor and extend reaction station action messages * Refactor dispensing station tasks to enhance parameter clarity and add batch processing capabilities - Updated `create_90_10_vial_feeding_task` to include detailed parameters for 90%/10% vial feeding, improving clarity and usability. - Introduced `create_batch_90_10_vial_feeding_task` for batch processing of 90%/10% vial feeding tasks with JSON formatted input. - Added `create_batch_diamine_solution_task` for batch preparation of diamine solution, also utilizing JSON formatted input. - Refined `create_diamine_solution_task` to include additional parameters for better task configuration. - Enhanced schema descriptions and default values for improved user guidance. * 修复to_plr_resources * add update remove * 支持选择器注册表自动生成 支持转运物料 * 修复资源添加 * 修复transfer_resource_to_another生成 * 更新transfer_resource_to_another参数,支持spot入参 * 新增test_resource动作 * fix host_node error * fix host_node test_resource error * fix host_node test_resource error * 过滤本地动作 * 移动内部action以兼容host node * 修复同步任务报错不显示的bug * feat: 允许返回非本节点物料,后面可以通过decoration进行区分,就不进行warning了 * update todo * modify bioyond/plr converter, bioyond resource registry, and tests * pass the tests * update todo * add conda-pack-build.yml * add auto install script for conda-pack-build.yml (cherry picked from commit172599adcf) * update conda-pack-build.yml * update conda-pack-build.yml * update conda-pack-build.yml * update conda-pack-build.yml * update conda-pack-build.yml * Add version in __init__.py Update conda-pack-build.yml Add create_zip_archive.py * Update conda-pack-build.yml * Update conda-pack-build.yml (with mamba) * Update conda-pack-build.yml * Fix FileNotFoundError * Try fix 'charmap' codec can't encode characters in position 16-23: character maps to <undefined> * Fix unilabos msgs search error * Fix environment_check.py * Update recipe.yaml * Update registry. Update uuid loop figure method. Update install docs. * Fix nested conda pack * Fix one-key installation path error * Bump version to 0.10.7 * Workshop bj (#99) * Add LaiYu Liquid device integration and tests Introduce LaiYu Liquid device implementation, including backend, controllers, drivers, configuration, and resource files. Add hardware connection, tip pickup, and simplified test scripts, as well as experiment and registry configuration for LaiYu Liquid. Documentation and .gitignore for the device are also included. * feat(LaiYu_Liquid): 重构设备模块结构并添加硬件文档 refactor: 重新组织LaiYu_Liquid模块目录结构 docs: 添加SOPA移液器和步进电机控制指令文档 fix: 修正设备配置中的最大体积默认值 test: 新增工作台配置测试用例 chore: 删除过时的测试脚本和配置文件 * add * 重构: 将 LaiYu_Liquid.py 重命名为 laiyu_liquid_main.py 并更新所有导入引用 - 使用 git mv 将 LaiYu_Liquid.py 重命名为 laiyu_liquid_main.py - 更新所有相关文件中的导入引用 - 保持代码功能不变,仅改善命名一致性 - 测试确认所有导入正常工作 * 修复: 在 core/__init__.py 中添加 LaiYuLiquidBackend 导出 - 添加 LaiYuLiquidBackend 到导入列表 - 添加 LaiYuLiquidBackend 到 __all__ 导出列表 - 确保所有主要类都可以正确导入 * 修复大小写文件夹名字 * 电池装配工站二次开发教程(带目录)上传至dev (#94) * 电池装配工站二次开发教程 * Update intro.md * 物料教程 * 更新物料教程,json格式注释 * Update prcxi driver & fix transfer_liquid mix_times (#90) * Update prcxi driver & fix transfer_liquid mix_times * fix: correct mix_times type * Update liquid_handler registry * test: prcxi.py * Update registry from pr * fix ony-key script not exist * clean files --------- Co-authored-by: Junhan Chang <changjh@dp.tech> Co-authored-by: ZiWei <131428629+ZiWei09@users.noreply.github.com> Co-authored-by: Guangxin Zhang <guangxin.zhang.bio@gmail.com> Co-authored-by: Xie Qiming <97236197+Andy6M@users.noreply.github.com> Co-authored-by: h840473807 <47357934+h840473807@users.noreply.github.com> Co-authored-by: LccLink <1951855008@qq.com> Co-authored-by: lixinyu1011 <61094742+lixinyu1011@users.noreply.github.com> Co-authored-by: shiyubo0410 <shiyubo@dp.tech>
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添加新动作指令(Action)
本指南将引导你完成添加新动作指令的整个流程,包括编写、在线构建和测试。
1. 编写新的 Action
1.1 创建 Action 文件
在 unilabos_msgs/action 目录中新建实验操作文件,如 MyDeviceCmd.action。一个 Action 定义由三个部分组成,分别是目标(Goal)、结果(Result)和反馈(Feedback),之间使用 --- 分隔:
# 目标(Goal)- 定义动作执行所需的参数
string command
float64 timeout
---
# 结果(Result)- 定义动作完成后返回的结果
bool success # 要求必须包含success,以便回传执行结果
string return_info # 要求必须包含return_info,以便回传执行结果
... # 其他
---
# 反馈(Feedback)- 定义动作执行过程中的反馈信息
float64 progress
string status
1.2 更新 CMakeLists.txt
在 unilabos_msgs/CMakeLists.txt 中的 add_action_files() 部分添加新定义的 action:
add_action_files(
FILES
MyDeviceCmd.action
# 其他已有的 action 文件...
)
2. 在线构建和测试
为了简化开发流程并确保构建环境的一致性,我们使用 GitHub Actions 进行在线构建。
2.1 Fork 仓库并创建分支
-
Fork 仓库:在 GitHub 上 fork
Uni-Lab-OS仓库到你的个人账户 -
Clone 你的 fork:
git clone https://github.com/YOUR_USERNAME/Uni-Lab-OS.git cd Uni-Lab-OS -
创建功能分支:
git checkout -b add-my-device-action -
提交你的更改:
git add unilabos_msgs/action/MyDeviceCmd.action git add unilabos_msgs/CMakeLists.txt git commit -m "Add MyDeviceCmd action for device control" git push origin add-my-device-action
2.2 触发在线构建
-
访问你的 fork 仓库:在浏览器中打开你的 fork 仓库页面
-
手动触发构建:
- 点击 "Actions" 标签
- 选择 "Multi-Platform Conda Build" 工作流
- 点击 "Run workflow" 按钮
-
监控构建状态:
- 构建过程大约需要 5-10 分钟
- 在 Actions 页面可以实时查看构建日志
- 构建完成后,可以下载生成的 conda 包进行测试
2.3 下载和测试构建包
-
下载构建产物:
- 在构建完成的 Action 页面,找到 "Artifacts" 部分
- 下载对应平台的
conda-package-*文件
-
本地测试安装:
# 解压下载的构建产物 unzip conda-package-linux-64.zip # 或其他平台 # 安装测试包 mamba install ./ros-humble-unilabos-msgs-*.conda -
验证 Action 是否正确添加:
# 检查 action 是否可用 ros2 interface show unilabos_msgs/action/MyDeviceCmd
3. 提交 Pull Request
测试成功后,向主仓库提交 Pull Request:
-
创建 Pull Request:
- 在你的 fork 仓库页面,点击 "New Pull Request"
- 选择你的功能分支作为源分支
- 填写详细的 PR 描述,包括:
- 添加的 Action 功能说明
- 测试结果
- 相关的设备或用例
-
等待审核和合并:
- 维护者会审核你的代码
- CI/CD 系统会自动运行完整的测试套件
- 合并后,新的指令集会自动发布到官方 conda 仓库
4. 使用新的 Action
如果采用自己构建的action包,可以通过以下命令更新安装:
mamba remove --force ros-humble-unilabos-msgs
mamba config set safety_checks disabled # 如果没有提升版本号,会触发md5与网络上md5不一致,是正常现象,因此通过本指令关闭md5检查
mamba install xxx.conda --offline
常见问题
Q: 构建失败怎么办? A: 检查 Actions 日志中的错误信息,通常是语法错误或依赖问题。修复后重新推送代码即可自动触发新的构建。
Q: 如何测试特定平台?
A: 在手动触发构建时,在平台选择中只填写你需要的平台,如 linux-64 或 win-64。
Q: 构建包在哪里下载? A: 在 Actions 页面的构建结果中,查找 "Artifacts" 部分,每个平台都有对应的构建包可供下载。