modify workstation_architecture docs
bioyond_HR (#133)
* feat: Enhance Bioyond synchronization and resource management
- Implemented synchronization for all material types (consumables, samples, reagents) from Bioyond, logging detailed information for each type.
- Improved error handling and logging during synchronization processes.
- Added functionality to save Bioyond material IDs in UniLab resources for future updates.
- Enhanced the `sync_to_external` method to handle material movements correctly, including querying and creating materials in Bioyond.
- Updated warehouse configurations to support new storage types and improved layout for better resource management.
- Introduced new resource types such as reactors and tip boxes, with detailed specifications.
- Modified warehouse factory to support column offsets for naming conventions (e.g., A05-D08).
- Improved resource tracking by merging extra attributes instead of overwriting them.
- Added a new method for updating resources in Bioyond, ensuring better synchronization of resource changes.
* feat: 添加TipBox和Reactor的配置到bottles.yaml
* fix: 修复液体投料方法中的volume参数处理逻辑
修复solid_feeding_vials方法中的volume参数处理逻辑，优化solvents参数的使用条件
更新液体投料方法，支持通过溶剂信息自动计算体积，添加solvents参数并更新文档描述
Add batch creation methods for vial and solution tasks
添加批量创建90%10%小瓶投料任务和二胺溶液配置任务的功能，更新相关参数和默认值
Refine descriptions in Bioyond reaction station YAML
Updated and clarified field and operation descriptions in the reaction_station_bioyond.yaml file for improved accuracy and consistency. Changes include more precise terminology, clearer parameter explanations, and standardized formatting for operation schemas.
refactor(workstation): 更新反应站参数描述并添加分液站配置文件
修正反应站方法参数描述，使其更准确清晰
添加bioyond_dispensing_station.yaml配置文件
add create_workflow script and test
add invisible_slots to carriers
fix(warehouses): 修正bioyond_warehouse_1x4x4仓库的尺寸参数
调整仓库的num_items_x和num_items_z值以匹配实际布局，并更新物品尺寸参数
save resource get data. allow empty value for layout and cross_section_type
More decks&plates support for bioyond (#115)
refactor(registry): 重构反应站设备配置，简化并更新操作命令
移除旧的自动操作命令，新增针对具体化学操作的命令配置
更新模块路径和配置结构，优化参数定义和描述
fix(dispensing_station): 修正物料信息查询方法调用
将直接调用material_id_query改为通过hardware_interface调用，以符合接口设计规范
fix(reaction_station): 为步骤参数添加Value字段传个BY后端
fix(bioyond/warehouses): 修正仓库尺寸和物品排列参数
调整仓库的x轴和z轴物品数量以及物品尺寸参数，使其符合4x1x4的规格要求
fix warehouse serialize/deserialize
fix bioyond converter
fix itemized_carrier.unassign_child_resource
allow not-loaded MSG in registry
add layout serializer & converter
warehouseuse A1-D4; add warehouse layout
fix(graphio): 修正bioyond到plr资源转换中的坐标计算错误
Fix resource assignment and type mapping issues
Corrects resource assignment in ItemizedCarrier by using the correct spot key from _ordering. Updates graphio to use 'typeName' instead of 'name' for type mapping in resource_bioyond_to_plr. Renames DummyWorkstation to BioyondWorkstation in workstation_http_service for clarity.
* Fix ResourceTreeSet load error
* Raise error when using unsupported type to create ResourceTreeSet
* Fix children key error
* Fix children key error
* Fix workstation resource not tracking
* Fix workstation deck & children resource dupe
* Fix workstation deck & children resource dupe
* Fix multiple resource error
* Fix resource tree update
* Fix resource tree update
* Force confirm uuid
* Tip more error log
* Refactor Bioyond workstation and experiment workflow (#105)
Refactored the Bioyond workstation classes to improve parameter handling and workflow management. Updated experiment.py to use BioyondReactionStation with deck and material mappings, and enhanced workflow step parameter mapping and execution logic. Adjusted JSON experiment configs, improved workflow sequence handling, and added UUID assignment to PLR materials. Removed unused station_config and material cache logic, and added detailed docstrings and debug output for workflow methods.
* Fix resource get.
Fix resource parent not found.
Mapping uuid for all resources.
* mount parent uuid
* Add logging configuration based on BasicConfig in main function
* fix workstation node error
* fix workstation node error
* Update boot example
* temp fix for resource get
* temp fix for resource get
* provide error info when cant find plr type
* pack repo info
* fix to plr type error
* fix to plr type error
* Update regular container method
* support no size init
* fix comprehensive_station.json
* fix comprehensive_station.json
* fix type conversion
* fix state loading for regular container
* Update deploy-docs.yml
* Update deploy-docs.yml
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Co-authored-by: ZiWei <131428629+ZiWei09@users.noreply.github.com>
