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Xuwznln 729a0fcf0c 37-biomek-i5i7 (#40 )

* add biomek.py demo implementation

* 更新LiquidHandlerBiomek类，添加资源创建功能，优化协议创建方法，修复部分代码格式问题，更新YAML配置以支持新功能。

* Test

* fix biomek success type

* Convert LH action to biomek.

* Update biomek.py

* 注册表上报handle和schema (param input)

* 修复biomek缺少的字段

* delete 's'

* Remove warnings

* Update biomek.py

* Biomek test

* Update biomek.py

* 新增transfer_biomek的msg

* New transfer_biomek

* Updated transfer_biomek

* 更新transfer_biomek的msg

* 更新transfer_biomek的msg

* 支持Biomek创建

* new action

* fix key name typo

* New parameter for biomek to run.

* Refine

* Update

* new actions

* new actions

* 1

* registry

* fix biomek startup
add action handles

* fix handles not as default entry

* biomek_test.py

biomek_test.py是最新的版本，运行它会生成complete_biomek_protocol.json

* Update biomek.py

* biomek_test.py

* fix liquid_handler.biomek handles

* host node新增resource add时间统计
create_resource新增handle
bump version to 0.9.2

* 修正物料上传时间
改用biomek_test
增加ResultInfoEncoder
支持返回结果上传

* 正确发送return_info结果

* 同步执行状态信息

* 取消raiseValueError提示

* Update biomek_test.py

* 0608 DONE

* 同步了Biomek.py 现在应可用

* biomek switch back to non-test

* temp disable initialize resource

* Refine biomek

* Refine copy issue

* Refine

---------

Co-authored-by: Junhan Chang <changjh@pku.edu.cn>
Co-authored-by: Guangxin Zhang <guangxin.zhang.bio@gmail.com>
Co-authored-by: qxw138 <qxw@stu.pku.edu.cn>

2025-06-09 16:57:42 +08:00

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Uni-Lab-OS

English | 中文

Uni-Lab-OS is a platform for laboratory automation, designed to connect and control various experimental equipment, enabling automation and standardization of experimental workflows.

🏆 Competition

Join the Intelligent Organic Chemistry Synthesis Competition to explore automated synthesis with Uni-Lab-OS!

Key Features

Multi-device integration management
Automated experimental workflows
Cloud connectivity capabilities
Flexible configuration system
Support for multiple experimental protocols

Documentation

Detailed documentation can be found at:

Online Documentation

Quick Start

Configure Conda Environment

Uni-Lab-OS recommends using mamba for environment management. Choose the appropriate environment file for your operating system:

# Create new environment
mamba env create -f unilabos-[YOUR_OS].yaml
mamba activate unilab

# Or update existing environment
# Where `[YOUR_OS]` can be `win64`, `linux-64`, `osx-64`, or `osx-arm64`.
conda env update --file unilabos-[YOUR_OS].yml -n environment_name

# Currently, you need to install the `unilabos_msgs` package
# You can download the system-specific package from the Release page
conda install ros-humble-unilabos-msgs-0.9.2-xxxxx.tar.bz2

# Install PyLabRobot and other prerequisites
git clone https://github.com/PyLabRobot/pylabrobot plr_repo
cd plr_repo
pip install .[opentrons]

Install Uni-Lab-OS:

# Clone the repository
git clone https://github.com/dptech-corp/Uni-Lab-OS.git
cd Uni-Lab-OS

# Install Uni-Lab-OS
pip install .

Start Uni-Lab System:

Please refer to Documentation - Boot Examples

Message Format

Uni-Lab-OS uses pre-built unilabos_msgs for system communication. You can find the built versions on the GitHub Releases page.

License

This project is licensed under GPL-3.0 - see the LICENSE file for details.

Project Statistics

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Contact Us

GitHub Issues: https://github.com/dptech-corp/Uni-Lab-OS/issues

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