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Author SHA1 Message Date
Calvin Cao
5cbd880e5a Merge pull request #140 from sun7151887/fix/yb3-material-names-and-model
fix: 修正YB warehouse排列方式和物料类型映射
2025-11-01 11:16:00 +08:00
Calvin Cao
41e7251f62 Merge branch 'workstation_dev_YB3' into fix/yb3-material-names-and-model 2025-11-01 11:14:45 +08:00
dijkstra402
727d2c2595 fix: 修正YB warehouse排列方式和物料类型映射
- 修改warehouse_factory为YB_warehouse_factory
- 调整warehouse排列方式:左上角为A01,竖着排ABCD,横着排01、02、03
- 修正config.py中的物料名称拼写错误(YB_fen_ye_20ml_Bottle, YB_pei_ye_xiao_Bottle)
- 添加缺失的warehouse函数(bioyond_warehouse_2x2x1, bioyond_warehouse_3x5x1, bioyond_warehouse_20x1x1)
- 更新decks.py中的warehouse位置映射
- 删除废弃的bottles.py和warehouses.py文件
2025-11-01 10:42:31 +08:00
Calvin Cao
202a2667fd Merge pull request #139 from lixinyu1011/workstation_dev_YB3
byxinyu111
2025-11-01 10:41:13 +08:00
lixinyu1011
03745c5d08 byxinyu111 2025-11-01 10:37:45 +08:00
Calvin Cao
385a495e21 Merge pull request #138 from lixinyu1011/workstation_dev_YB3
新建入库物料系统
2025-10-31 19:04:28 +08:00
lixinyu1011
91513a5f4c Delete button_battery_station.py 2025-10-31 19:02:06 +08:00
lixinyu1011
a62896eda2 1031_byxinyu 2025-10-31 18:57:38 +08:00
lixinyu1011
a82d1b7bdb Merge remote-tracking branch 'upstream/workstation_dev_YB3' into workstation_dev_YB3 2025-10-31 15:30:28 +08:00
lixinyu1011
6d7c39da9e 1031 2025-10-31 15:29:59 +08:00
Calvin Cao
d8e9ad4413 Merge pull request #136 from sun7151887/fix/yb3-material-names-and-model
fix: 更新物料类型配置映射
2025-10-31 15:13:48 +08:00
dijkstra402
eb93b83415 fix: 更新物料类型配置映射 2025-10-31 15:05:47 +08:00
lixinyu1011
6df93a5db7 Merge remote-tracking branch 'upstream/workstation_dev_YB3' into workstation_dev_YB3 2025-10-31 14:02:45 +08:00
lixinyu1011
2eb9986edb 123 2025-10-31 13:54:58 +08:00
calvincao
fe4e49e56d feat(workstation): 更新 Bioyond 和 Coin Cell 组装工作站配置
- 修改 Bioyond Studio 配置文件中的 API 主机地址
- 更新 bioyond_cell_workstation.py 中的默认模板路径
- 新增物料模板文件 material_template.xlsx
- 扩展 func_pack_send_msg_cmd 函数以支持 assembly_pressure 参数
- 更新 coin_cell_workstation.yaml 文件以包含 assembly_pressure 的默认值和类型定义
2025-10-31 13:53:58 +08:00
calvincao
0fba4cf275 feat(unilabos): 更新设备配置和资源定义
- 修改了 bioyond_cell.yaml 中的 xlsx_path 路径分隔符为反斜杠- 在 bioyond_cell.yaml 中新增多个自动命令定义,包括创建物料、处理报告和调度重置等功能- 修改 coin_cell_assembly.py 中 func_pack_send_msg_cmd 函数签名并调整调用参数
- 新增 qiming_coin_cell_code 方法用于设置启明扣电配置参数
- 更新 coin_cell_assembly_a.csv 文件中的寄存器描述和新增压制模式及清洁忽略选项- 修改 bioyond_studio 配置文件中的默认 API 主机地址
- 更新 new_cellconfig3c.json 中的设备类名为 coincellassemblyworkstation_device- 删除 reaction_station_bioyond.yaml 的全部内容,仅保留空对象
-重新组织 YB_bottle.yaml 和 YB_bottle_carriers.yaml 中的资源分类和命名定义
2025-10-30 19:56:34 +08:00
Calvin Cao
ef9359776a Merge pull request #134 from sun7151887/fix/yb3-material-names-and-model
feat: 添加扣电工作站 setup() 方法并修复显示问题
2025-10-30 16:31:50 +08:00
Calvin Cao
954f1ee7b2 Merge branch 'workstation_dev_YB3' into fix/yb3-material-names-and-model 2025-10-30 16:31:27 +08:00
dijkstra402
f58921ef82 feat: 添加扣电工作站 setup() 方法并修复显示问题
主要改动:
-  在 CoincellDeck 实现 setup() 方法(模仿 decks.py 三步配置模式)
-  统一 Deck 默认尺寸为 1000x1000x900mm
-  优化料盘布局:横向排列,留50mm边距
-  简化工作站 deck 创建逻辑(从30行减至1行)
-  新增 create_coin_cell_deck() 便捷函数
-  修复 ClipMagazine 参数错误
-  删除约200行冗余代码
-  修复底座不显示问题

技术细节:
- MaterialPlate 位置: liaopan1(50,50), liaopan2(250,50), 电池料盘(450,50)
- 自动为 liaopan1 添加16个初始极片
- 支持3种 deck 创建方式
- 智能判断是否需要 setup
2025-10-30 16:18:43 +08:00
calvincao
95bdd39bf8 fix(workstation): 更新 coin_cell_assembly_a.csv 中的寄存器和线圈定义为中文描述
- 将寄存器和线圈定义中的英文描述替换为中文,提升可读性
- 确保所有定义格式一致,保持文件的整洁性和维护性
2025-10-30 14:25:33 +08:00
calvincao
b3e28196c6 feat(battery): 更新电池工位资源配置
- 将 coin_cell_deck 类型从 container 更改为 coin_cell_deck
- 将 material_plate 类型从 container 更改为 material_plate
- 将 material_hole 类型从 container 更改为 material_hole- 移除电极片容器结构,直接使用 electrode_sheet 类型
- 更新物料孔配置参数,包括直径、深度和最大片数
-重新组织料盘结构,明确父子节点关系
- 添加新的电极片定义并关联到对应的物料孔
- 调整所有物料孔坐标位置以匹配新布局
- 为 liaopan2 添加完整的子节点结构和排序规则
2025-10-30 11:22:17 +08:00
calvincao
9fe8f4f28f fix(workstation): 修复 coin_cell_assembly_a.csv 文件中的寄存器和线圈定义格式
- 重新排列并清理了 coin_cell_assembly_a.csv 中的寄存器和线圈定义
- 确保所有定义的格式一致,提升可读性和维护性
2025-10-29 21:36:52 +08:00
calvincao
39bc317bfc feat(workstation): 支持多种输入类型的 station_resource 并优化物料系统初始化
- 新增 `_coerce_station_resource_input` 函数以支持 dict、list 和其他类型转换为 Deck
- 添加对 Modbus 客户端方法的兼容性封装,确保 slave/unit 参数正确传递- 在初始化时根据 station_resource 动态创建或赋值 deck
- 自动构建默认物料台面及三个料盘,并分配初始电极片资源
- 移除旧有的硬编码物料系统注释代码
- 更新资源导出逻辑以使用工作站实例中的 deck 属性
2025-10-29 18:39:22 +08:00
calvincao
a130c03ebd feat(workstation): 移除旧版bioyond设备配置并优化扣电组装工作站- 删除bioyond.yaml和bioyond_dispensing_station.yaml旧设备配置文件- 优化扣电组装工作站配置,移除不必要的子资源引用- 更新Modbus通信地址和端口配置- 简化CoinCellAssemblyWorkstation类的初始化参数- 移除冗余的deck资源创建逻辑
- 更新反应站配置文件中drip_back命令的位置
- 添加新的Modbus寄存器和线圈定义
- 移除workstation_base.py基类文件
2025-10-29 10:44:30 +08:00
calvincao
a97781c4eb Merge remote-tracking branch 'origin/dev' into workstation_dev_YB3 2025-10-28 11:47:07 +08:00
calvincao
c35edcece1 重构 coin_cell_assembly 目录结构 2025-10-28 11:42:14 +08:00
ZiWei
b9ddee8f2c 更新液体投料方法,支持通过溶剂信息自动计算体积,添加solvents参数并更新文档描述 2025-10-28 00:12:33 +08:00
ZiWei
a0c5095304 Add batch creation methods for vial and solution tasks
添加批量创建90%10%小瓶投料任务和二胺溶液配置任务的功能,更新相关参数和默认值
2025-10-27 23:55:32 +08:00
Calvin Cao
524e0f3053 Merge pull request #132 from sun7151887/fix/yb3-material-names-and-model
feat: 添加YB瓶子和载架配置
2025-10-27 22:30:40 +08:00
Calvin Cao
66f483929d Merge branch 'workstation_dev_YB3' into fix/yb3-material-names-and-model 2025-10-27 22:30:16 +08:00
dijkstra402
2d58576937 feat: 添加YB瓶子和载架配置
- 在YB_bottles.py中添加8种瓶子类型(100ml液体、高粘液、5ml分液瓶、20ml分液瓶、配液瓶小、配液瓶大、枪头等)
- 在YB_bottle_carriers.py中添加12个载架函数(包括新增的高粘液载架和100ml液体载架)
- 更新config.py的MATERIAL_TYPE_MAPPINGS配置,添加16种物料类型映射
- 创建YB_bottle_carriers.yaml注册文件,包含所有载架和瓶子函数
- 创建YB_bottle.yaml注册文件,包含独立的瓶子函数配置
- 移除不存在的瓶子函数引用(YB_Solid_Vial等4个函数)
2025-10-27 22:23:09 +08:00
calvincao
ff25e814de feat: add new glove box internal stack configuration with site UUIDs 2025-10-27 22:08:02 +08:00
Calvin Cao
0163d16cbb Merge pull request #131 from lixinyu1011/workstation_dev_YB3
by_Xinyu1027
2025-10-27 20:15:43 +08:00
lixinyu1011
3231d60646 1027by_Xinyu 2025-10-27 20:08:19 +08:00
lixinyu1011
d0279f63f0 Merge remote-tracking branch 'upstream/workstation_dev_YB3' into workstation_dev_YB3 2025-10-27 19:33:45 +08:00
lixinyu1011
ceef342860 1027byxinyu 2025-10-27 18:16:26 +08:00
h840473807
42f7010134 提交扣电工站最新代码到YB3分支
提交扣电工站最新代码到YB3分支,更新注册表
2025-10-27 11:57:57 +08:00
calvincao
190b2d2518 清理扣电不必要代码 2025-10-27 11:43:03 +08:00
calvincao
2901d72b4b feat: add button battery assembly station resources and configuration files
- Introduced new Python modules for button battery assembly, including resource classes and configurations.
- Added JSON and CSV files for resource definitions and device configurations.
- Created initial setup for the coin cell assembly workstation, including material handling and resource management.
2025-10-25 13:50:41 +08:00
calvincao
6ad0157b50 feat: add new warehouse configurations and update site UUIDs in bioyond_studio config 2025-10-24 16:37:11 +08:00
calvincao
55b678cd37 fix: update report IP address in configuration and clean up parameters in SOLID_LIQUID_MAPPINGS 2025-10-24 14:22:39 +08:00
Calvin Cao
8101a22a0f Merge pull request #130 from sun7151887/workstation_dev_YB3
refactor: 将 BIOYOND_PolymerStation_ 前缀统一改为 YB_
2025-10-24 13:56:08 +08:00
Calvin Cao
667138baac Merge branch 'workstation_dev_YB3' into workstation_dev_YB3 2025-10-24 13:56:00 +08:00
dijkstra402
01adf7ca92 refactor: 将 BIOYOND_PolymerStation_ 前缀统一改为 YB_
- 重命名 bottles.py 中所有工厂函数:BIOYOND_PolymerStation_* -> YB_*
- 重命名 bottle_carriers.py 中所有载具工厂函数和导入
- 更新 registry YAML 文件中的 module 引用
- 更新 MATERIAL_TYPE_MAPPINGS 配置中的类型字符串
- 更新测试文件和样例 JSON 中的类型引用
- 添加 YB_* 别名条目到 registry 以支持双键访问
2025-10-24 13:49:48 +08:00
Calvin Cao
f606062696 Merge pull request #129 from lixinyu1011/workstation_dev_YB3
xinyu1024修改
2025-10-24 11:44:16 +08:00
Calvin Cao
67d1c4acce Merge branch 'workstation_dev_YB3' into workstation_dev_YB3 2025-10-24 11:44:04 +08:00
lixinyu1011
7206e42bf1 xinyu1024修改 2025-10-24 11:37:36 +08:00
Xuwznln
e504505137 use ordering to convert identifier to idx 2025-10-24 02:58:50 +08:00
Xuwznln
4d9d5701e9 use ordering to convert identifier to idx 2025-10-24 02:56:07 +08:00
Xuwznln
6016c4b588 convert identifier to site idx 2025-10-24 02:51:45 +08:00
Xuwznln
be02bef9c4 correct extra key 2025-10-24 02:42:36 +08:00
Xuwznln
e62f0c2585 correct extra key 2025-10-24 02:39:28 +08:00
Xuwznln
b6de0623e2 update extra before transfer 2025-10-24 02:36:47 +08:00
Xuwznln
9d081e9fcd fix multiple instance error 2025-10-24 02:32:33 +08:00
Xuwznln
85a58e3464 fix multiple instance error 2025-10-24 02:29:46 +08:00
Xuwznln
85590672d8 fix multiple instance error 2025-10-24 02:24:44 +08:00
Xuwznln
1d4018196d add resource_tree_transfer func 2025-10-24 02:18:12 +08:00
Xuwznln
5d34f742af fox itemrized carrier assign child resource 2025-10-24 02:09:02 +08:00
calvincao
e92d933968 refactor(bioyond_cell_workstation): 重构物料创建与入库逻辑- 移除从CSV读取物料名称的功能
- 新增通过参数传递物料名称列表的方式- 抽离仓库位置加载逻辑至独立方法
- 简化物料创建与入库流程- 统一使用资源同步器进行数据同步
- 更新调用示例以适配新接口
2025-10-23 22:36:21 +08:00
Calvin Cao
f0ebcc60bb Merge pull request #126 from sun7151887/fix/yb3-material-names-and-model
添加新物料类型映射:包括100ml液体、液、高粘液、5ml/20ml分液瓶、配液瓶、加样头、适配器块、枪头盒等
2025-10-23 21:59:26 +08:00
dijkstra402
e2097f0b22 添加新物料类型映射:包括100ml液体、液、高粘液、5ml/20ml分液瓶、配液瓶、加样头、适配器块、枪头盒等 2025-10-23 21:56:54 +08:00
calvincao
fd73731130 增强批量入库功能,添加物料数据同步逻辑;优化日志记录以提供更详细的同步状态信息。 2025-10-23 18:02:49 +08:00
Calvin Cao
ab7f2081c9 Merge pull request #124 from sun7151887/fix/yb3-material-names-and-model
更新载架网格布局:5ml/20ml/配液瓶(小)板改为4x2,加样头(大)板改为1x1
2025-10-23 17:45:29 +08:00
dijkstra402
9e850d8a81 更新载架网格布局:5ml/20ml/配液瓶(小)板改为4x2,加样头(大)板改为1x1 2025-10-23 17:42:10 +08:00
Xuwznln
5bef19e6d6 support internal device material transfer 2025-10-23 17:32:09 +08:00
calvincao
1af6ffafc6 新增批量创建固体物料和从CSV文件入库的功能;更新配置文件中的 report_ip 默认值;新增 solid_materials.csv 文件以支持物料名称导入。 2025-10-23 17:32:08 +08:00
Calvin Cao
35fc2f5ea6 Merge pull request #123 from sun7151887/fix/yb3-material-names-and-model
fix(yb3): 物料名称与模型对齐;YAML 去掉 BIOYOND_PolymerStation_ 前缀;修复 6StockCarri…
2025-10-23 15:43:40 +08:00
dijkstra402
d3d8ba6500 fix(yb3): 物料名称与模型对齐;YAML 去掉 BIOYOND_PolymerStation_ 前缀;修复 6StockCarrier model 2025-10-23 15:32:36 +08:00
Xuwznln
f816799753 remove extra key 2025-10-23 12:01:12 +08:00
Xuwznln
a45d841769 remove extra key 2025-10-23 11:37:26 +08:00
calvincao
5a7845d8ca 更新配置文件中的 report_ip 默认值,优化 bioyond_cell_workstation.py 中的订单状态处理逻辑,新增多个瓶子和载架类型的定义,调整仓库结构以支持更灵活的物料管理。 2025-10-23 08:34:33 +08:00
Xuwznln
7f0b33b3e3 use same callback group 2025-10-23 01:52:33 +08:00
calvincao
9c4d0256cf 增强配置文件,新增 report_ip 选项以支持本机 IP 地址的灵活配置;在 bioyond_cell_workstation.py 中优化推送地址更新逻辑,支持自动检测和配置优先级处理。 2025-10-22 16:38:32 +08:00
calvincao
de7c80c3c2 重构:完善配置加载机制与初始化逻辑
新增环境变量覆盖机制,增强配置灵活性

优化 bioyond_rpc.py 与 bioyond_cell_workstation.py 的初始化流程与结构

修正 station.py 工作流映射逻辑,确保正确性

提高代码可读性与模块间解耦程度
2025-10-22 16:13:36 +08:00
Xuwznln
2006406a24 support material extra 2025-10-22 14:51:07 +08:00
Xuwznln
f94985632b support material extra
support update_resource_site in extra
2025-10-22 14:50:05 +08:00
Xianwei Qi
12ba110569 修改prcxi连线 2025-10-22 14:00:38 +08:00
ZiWei
97212be8b7 Refine descriptions in Bioyond reaction station YAML
Updated and clarified field and operation descriptions in the reaction_station_bioyond.yaml file for improved accuracy and consistency. Changes include more precise terminology, clearer parameter explanations, and standardized formatting for operation schemas.
2025-10-21 23:32:41 +08:00
ZiWei
9bdd42f12f refactor(workstation): 更新反应站参数描述并添加分液站配置文件
修正反应站方法参数描述,使其更准确清晰
添加bioyond_dispensing_station.yaml配置文件
2025-10-21 23:30:45 +08:00
Xianwei Qi
627140da03 prcxi样例图 2025-10-21 21:15:54 +08:00
Xianwei Qi
5ceedb0565 Create example_prcxi.json 2025-10-21 20:38:40 +08:00
Junhan Chang
8c77a20c43 add create_workflow script and test 2025-10-21 20:32:00 +08:00
Xuwznln
3ff894feee add invisible_slots to carriers 2025-10-21 17:51:30 +08:00
ZiWei
fa5896ffdb fix(warehouses): 修正bioyond_warehouse_1x4x4仓库的尺寸参数
调整仓库的num_items_x和num_items_z值以匹配实际布局,并更新物品尺寸参数
2025-10-21 17:15:51 +08:00
Xuwznln
eb504803ac save resource get data. allow empty value for layout and cross_section_type 2025-10-21 16:55:43 +08:00
lixinyu1011
8b0c845661 More decks&plates support for bioyond (#115) 2025-10-21 16:25:54 +08:00
Xuwznln
693873bfa9 save resource get data. allow empty value for layout and cross_section_type 2025-10-21 16:22:52 +08:00
calvincao
e70c545ec8 修复 **bioyond_yihua_YB.json** 中的 JSON 合并冲突,清理不必要的标记。 2025-10-21 15:19:44 +08:00
calvincao
2c2d1e5569 在 **bioyond_cell_workstation.py** 中实现 update_push_ip 方法并增强错误处理;修复 **bioyond_yihua_YB.json** 中的 JSON 合并冲突。 2025-10-21 14:58:38 +08:00
ZiWei
57da2d8da2 refactor(registry): 重构反应站设备配置,简化并更新操作命令
移除旧的自动操作命令,新增针对具体化学操作的命令配置
更新模块路径和配置结构,优化参数定义和描述
2025-10-21 14:52:27 +08:00
Calvin Cao
4638611fe7 Merge pull request #119 from lixinyu1011/workstation_dev_YB3
Update station.py
2025-10-21 14:51:54 +08:00
lixinyu1011
37641c4389 xinyu1021推送代码 2025-10-21 14:48:55 +08:00
ZiWei
8d1fd01259 fix(dispensing_station): 修正物料信息查询方法调用
将直接调用material_id_query改为通过hardware_interface调用,以符合接口设计规范
2025-10-21 13:49:36 +08:00
Xuwznln
388259e64b Update create_resource device_id
(cherry picked from commit bc30f23e34)
2025-10-20 21:47:46 +08:00
lixinyu1011
ab697ce973 Update station.py 2025-10-20 16:12:38 +08:00
Calvin Cao
d4724b8664 Merge pull request #117 from lixinyu1011/workstation_dev_YB3
Update bioyond_cell_workstation.py
2025-10-20 15:33:17 +08:00
lixinyu1011
2f25063bf1 Update bioyond_cell_workstation.py 2025-10-20 15:30:41 +08:00
Calvin Cao
00b4b9cd87 Merge pull request #116 from lixinyu1011/workstation_dev_YB3
1020_YB奔耀仿真机同步对齐dev_unilab可控
2025-10-20 12:56:36 +08:00
lixinyu1011
d2352cc514 1020_YB奔耀仿真机同步对齐dev_unilab可控
待修改unilab的http服务
2025-10-20 12:48:19 +08:00
ZiWei
2c130e7f37 fix(reaction_station): 为步骤参数添加Value字段传个BY后端 2025-10-20 10:40:51 +08:00
ZiWei
9f7c3f02f9 fix(bioyond/warehouses): 修正仓库尺寸和物品排列参数
调整仓库的x轴和z轴物品数量以及物品尺寸参数,使其符合4x1x4的规格要求
2025-10-19 08:36:40 +08:00
Junhan Chang
19dd80dcdb fix warehouse serialize/deserialize 2025-10-19 08:18:18 +08:00
Junhan Chang
9d5ed627a2 fix bioyond converter 2025-10-19 05:21:41 +08:00
Junhan Chang
2d0ff87bc8 fix itemized_carrier.unassign_child_resource 2025-10-19 05:19:19 +08:00
Junhan Chang
d78475de9a allow not-loaded MSG in registry 2025-10-19 05:18:15 +08:00
Junhan Chang
88ae56806c add layout serializer & converter 2025-10-18 20:53:03 +08:00
Junhan Chang
95dd8beb81 warehouseuse A1-D4; add warehouse layout 2025-10-18 20:27:50 +08:00
ZiWei
4ab3fadbec fix(graphio): 修正bioyond到plr资源转换中的坐标计算错误 2025-10-18 19:25:23 +08:00
ZiWei
229888f834 Fix resource assignment and type mapping issues
Corrects resource assignment in ItemizedCarrier by using the correct spot key from _ordering. Updates graphio to use 'typeName' instead of 'name' for type mapping in resource_bioyond_to_plr. Renames DummyWorkstation to BioyondWorkstation in workstation_http_service for clarity.
2025-10-18 18:55:16 +08:00
ZiWei
b443b39ebf Merge branch 'dev' of https://github.com/dptech-corp/Uni-Lab-OS into dev 2025-10-18 16:49:22 +08:00
Junhan Chang
0434bbc15b add more enumeration in POSE 2025-10-18 16:46:34 +08:00
ZiWei
5791b81954 Merge branch 'dev' of https://github.com/dptech-corp/Uni-Lab-OS into dev 2025-10-18 16:23:32 +08:00
Junhan Chang
bd51c74fab fix converter in resource_tracker 2025-10-18 16:22:30 +08:00
ZiWei
ba81cbddf8 Merge branch 'dev' of https://github.com/dptech-corp/Uni-Lab-OS into dev 2025-10-18 10:51:04 +08:00
ZiWei
4e92a26057 fix(reaction_station): 清空工作流序列和参数避免重复执行 (#113)
在创建任务后清空工作流序列和参数,防止下次执行时累积重复
2025-10-17 13:41:50 +08:00
ZiWei
c2895bb197 fix(reaction_station): 清空工作流序列和参数避免重复累积 2025-10-17 13:13:54 +08:00
ZiWei
0423f4f452 Merge branch 'dev' of https://github.com/dptech-corp/Uni-Lab-OS into dev 2025-10-17 13:00:32 +08:00
Junhan Chang
41390fbef9 fix resource_get in action 2025-10-17 11:18:47 +08:00
ZiWei
98bdb4e7e4 Merge branch 'dev' of https://github.com/dptech-corp/Uni-Lab-OS into dev 2025-10-17 03:06:04 +08:00
Xuwznln
30037a077a correct return message 2025-10-17 03:03:08 +08:00
ZiWei
6972680099 Refactor Bioyond workstation and experiment workflow -fix (#111)
* refactor(bioyond_studio): 优化材料缓存加载和参数验证逻辑

改进材料缓存加载逻辑以支持多种材料类型和详细材料处理
更新工作流参数验证中的字段名从key/value改为Key/DisplayValue
移除未使用的merge_workflow_with_parameters方法
添加get_station_info方法获取工作站基础信息
清理实验文件中的注释代码和更新导入路径

* fix: 修复资源移除时的父资源检查问题

在BaseROS2DeviceNode中,移除资源前添加对父资源是否为None的检查,避免空指针异常
同时更新Bottle和BottleCarrier类以支持**kwargs参数
修正测试文件中Liquid_feeding_beaker的大小写拼写错误
2025-10-17 02:59:58 +08:00
ZiWei
9d2c93807d Merge branch 'dev' of https://github.com/dptech-corp/Uni-Lab-OS into dev 2025-10-17 02:40:33 +08:00
Xuwznln
e728007bc5 cancel upload_registry 2025-10-17 02:34:59 +08:00
ZiWei
9c5ecda7cc Refactor Bioyond workstation and experiment workflow (#110)
Refactored the Bioyond workstation classes to improve parameter handling and workflow management. Updated experiment.py to use BioyondReactionStation with deck and material mappings, and enhanced workflow step parameter mapping and execution logic. Adjusted JSON experiment configs, improved workflow sequence handling, and added UUID assignment to PLR materials. Removed unused station_config and material cache logic, and added detailed docstrings and debug output for workflow methods.
2025-10-17 02:32:13 +08:00
ZiWei
2d26c3fac6 fix: 修复资源移除时的父资源检查问题
在BaseROS2DeviceNode中,移除资源前添加对父资源是否为None的检查,避免空指针异常
同时更新Bottle和BottleCarrier类以支持**kwargs参数
修正测试文件中Liquid_feeding_beaker的大小写拼写错误
2025-10-17 02:23:58 +08:00
ZiWei
f5753afb7c refactor(bioyond_studio): 优化材料缓存加载和参数验证逻辑
改进材料缓存加载逻辑以支持多种材料类型和详细材料处理
更新工作流参数验证中的字段名从key/value改为Key/DisplayValue
移除未使用的merge_workflow_with_parameters方法
添加get_station_info方法获取工作站基础信息
清理实验文件中的注释代码和更新导入路径
2025-10-16 23:58:24 +08:00
Xuwznln
398b2dde3f Close #107
Update doc url.
2025-10-16 14:44:09 +08:00
Xuwznln
62c4135938 Update deploy-docs.yml 2025-10-16 14:28:55 +08:00
Xuwznln
027b4269c4 Update deploy-docs.yml 2025-10-16 14:23:22 +08:00
Xuwznln
3757bd9c58 fix state loading for regular container 2025-10-16 14:04:03 +08:00
Xuwznln
c75b7d5aae fix type conversion 2025-10-16 13:55:38 +08:00
Xuwznln
dfc635189c fix comprehensive_station.json 2025-10-16 13:52:07 +08:00
Xuwznln
d8f3ebac15 fix comprehensive_station.json 2025-10-16 13:46:59 +08:00
Xuwznln
4a1e703a3a support no size init 2025-10-16 13:35:59 +08:00
Xuwznln
55d22a7c29 Update regular container method 2025-10-16 13:33:28 +08:00
Xuwznln
03a4e4ecba fix to plr type error 2025-10-16 13:19:59 +08:00
Xuwznln
2316c34cb5 fix to plr type error 2025-10-16 13:12:21 +08:00
Xuwznln
a8887161d3 pack repo info 2025-10-16 13:06:13 +08:00
Xuwznln
25834f5ba0 provide error info when cant find plr type 2025-10-16 13:05:44 +08:00
Xuwznln
a1e9332b51 temp fix for resource get 2025-10-16 03:20:37 +08:00
Xuwznln
357fc038ef temp fix for resource get 2025-10-16 03:15:56 +08:00
Xuwznln
fd58ef07f3 Update boot example 2025-10-16 02:33:15 +08:00
Xuwznln
93dee2c1dc fix workstation node error 2025-10-16 01:59:48 +08:00
Xuwznln
70fbf19009 fix workstation node error 2025-10-16 01:58:15 +08:00
ZiWei
9149155232 Add logging configuration based on BasicConfig in main function 2025-10-14 21:02:15 +08:00
Xuwznln
1ca1792e3c mount parent uuid 2025-10-14 18:07:59 +08:00
Xuwznln
485e7e8dd2 Fix resource get.
Fix resource parent not found.
Mapping uuid for all resources.
2025-10-14 17:24:41 +08:00
ZiWei
4ddabdcb65 Refactor Bioyond workstation and experiment workflow (#105)
Refactored the Bioyond workstation classes to improve parameter handling and workflow management. Updated experiment.py to use BioyondReactionStation with deck and material mappings, and enhanced workflow step parameter mapping and execution logic. Adjusted JSON experiment configs, improved workflow sequence handling, and added UUID assignment to PLR materials. Removed unused station_config and material cache logic, and added detailed docstrings and debug output for workflow methods.
2025-10-14 02:46:31 +08:00
Xuwznln
a5b0325301 Tip more error log 2025-10-14 02:29:14 +08:00
Xuwznln
50b44938c7 Force confirm uuid 2025-10-14 02:22:39 +08:00
Xuwznln
df0d2235b0 Fix resource tree update 2025-10-14 01:55:29 +08:00
Xuwznln
4e434eeb97 Fix resource tree update 2025-10-14 01:53:04 +08:00
Xuwznln
ca027bf0eb Fix multiple resource error 2025-10-14 01:45:08 +08:00
Xuwznln
635a332b4e Fix workstation deck & children resource dupe 2025-10-14 00:21:37 +08:00
Xuwznln
edf7a117ca Fix workstation deck & children resource dupe 2025-10-14 00:21:16 +08:00
Xuwznln
70b2715996 Fix workstation resource not tracking 2025-10-14 00:05:41 +08:00
Xuwznln
7e8dfc2dc5 Fix children key error 2025-10-13 23:34:17 +08:00
Xuwznln
9b626489a8 Fix children key error 2025-10-13 21:20:42 +08:00
Xuwznln
03fe208743 Raise error when using unsupported type to create ResourceTreeSet 2025-10-13 15:20:30 +08:00
Xuwznln
e913e540a3 Fix ResourceTreeSet load error 2025-10-13 15:16:56 +08:00
Xuwznln
aed39b648d Fix workstation startup
Update registry
2025-10-13 15:01:46 +08:00
Xuwznln
8c8359fab3 Fix one-key installation build for windows 2025-10-13 15:01:46 +08:00
Xuwznln
5d20be0762 Fix conda pack on windows
(cherry picked from commit 2a8e8d014b)
2025-10-13 13:20:20 +08:00
Junhan Chang
09f745d300 modify default config 2025-10-13 10:49:15 +08:00
Junhan Chang
bbcbcde9a4 add plr_to_bioyond, and refactor bioyond stations 2025-10-13 09:41:43 +08:00
hh.(SII)
42b437cdea fix: rename schema field to resource_schema with serialization and validation aliases (#104)
Co-authored-by: ZiWei <131428629+ZiWei09@users.noreply.github.com>
2025-10-13 03:23:04 +08:00
Xuwznln
ffd0f2d26a Complete all one key installation 2025-10-13 03:21:16 +08:00
Xuwznln
32422c0b3d Install conda-pack before pack command 2025-10-13 03:09:44 +08:00
Xuwznln
c44e597dc0 Add conda-pack to base when building one-key installer 2025-10-13 03:01:48 +08:00
Xuwznln
4eef012a8e Fix param error when using mamba run 2025-10-13 02:50:33 +08:00
Xuwznln
ac69452f3c Try fix one-key build on linux 2025-10-13 02:35:06 +08:00
Xuwznln
57b30f627b Try fixx one-key build on linux 2025-10-13 02:24:03 +08:00
Xuwznln
2d2a4ca067 Try fix one-key build on linux
(cherry picked from commit eb1f3fbe1c)
2025-10-13 02:10:20 +08:00
Xuwznln
a2613aad4c fix startup env check.
add auto install during one-key installation
2025-10-13 01:35:28 +08:00
Xuwznln
54f75183ff clean files 2025-10-12 23:26:49 +08:00
Xuwznln
735be067dc fix ony-key script not exist 2025-10-12 23:10:06 +08:00
Xuwznln
0fe62d64f0 Update registry from pr 2025-10-12 23:04:25 +08:00
shiyubo0410
2d4ecec1e1 Update prcxi driver & fix transfer_liquid mix_times (#90)
* Update prcxi driver & fix transfer_liquid mix_times

* fix: correct mix_times type

* Update liquid_handler registry

* test: prcxi.py
2025-10-12 22:56:39 +08:00
lixinyu1011
0f976a1874 电池装配工站二次开发教程(带目录)上传至dev (#94)
* 电池装配工站二次开发教程

* Update intro.md

* 物料教程

* 更新物料教程,json格式注释
2025-10-12 22:56:14 +08:00
ZiWei
b263a7e679 Workshop bj (#99)
* Add LaiYu Liquid device integration and tests

Introduce LaiYu Liquid device implementation, including backend, controllers, drivers, configuration, and resource files. Add hardware connection, tip pickup, and simplified test scripts, as well as experiment and registry configuration for LaiYu Liquid. Documentation and .gitignore for the device are also included.

* feat(LaiYu_Liquid): 重构设备模块结构并添加硬件文档

refactor: 重新组织LaiYu_Liquid模块目录结构
docs: 添加SOPA移液器和步进电机控制指令文档
fix: 修正设备配置中的最大体积默认值
test: 新增工作台配置测试用例
chore: 删除过时的测试脚本和配置文件

* add

* 重构: 将 LaiYu_Liquid.py 重命名为 laiyu_liquid_main.py 并更新所有导入引用

- 使用 git mv 将 LaiYu_Liquid.py 重命名为 laiyu_liquid_main.py
- 更新所有相关文件中的导入引用
- 保持代码功能不变,仅改善命名一致性
- 测试确认所有导入正常工作

* 修复: 在 core/__init__.py 中添加 LaiYuLiquidBackend 导出

- 添加 LaiYuLiquidBackend 到导入列表
- 添加 LaiYuLiquidBackend 到 __all__ 导出列表
- 确保所有主要类都可以正确导入

* 修复大小写文件夹名字
2025-10-12 22:54:38 +08:00
Xuwznln
7c7f1b31c5 Bump version to 0.10.7 2025-10-12 22:52:34 +08:00
Xuwznln
00e668e140 Fix one-key installation path error 2025-10-12 22:49:51 +08:00
Xuwznln
4989f65a0b Fix nested conda pack 2025-10-12 22:45:05 +08:00
Xuwznln
9fa3688196 Update registry. Update uuid loop figure method. Update install docs. 2025-10-12 22:38:04 +08:00
Xuwznln
40fb1ea49c Merge branch 'main' into dev
# Conflicts:
#	.conda/recipe.yaml
#	.github/workflows/conda-pack-build.yml
#	recipes/msgs/recipe.yaml
#	recipes/unilabos/recipe.yaml
#	scripts/verify_installation.py
#	setup.py
#	unilabos/app/main.py
#	unilabos/app/mq.py
#	unilabos/app/register.py
#	unilabos/compile/heatchill_protocol.py
#	unilabos/compile/separate_protocol.py
#	unilabos/config/config.py
#	unilabos/devices/pump_and_valve/runze_backbone.py
#	unilabos/devices/pump_and_valve/runze_multiple_backbone.py
#	unilabos/registry/devices/characterization_chromatic.yaml
#	unilabos/registry/devices/liquid_handler.yaml
#	unilabos/registry/devices/pump_and_valve.yaml
#	unilabos/registry/devices/robot_arm.yaml
#	unilabos/registry/devices/robot_linear_motion.yaml
#	unilabos/registry/devices/work_station.yaml
#	unilabos/registry/registry.py
#	unilabos/registry/resources/organic/workstation.yaml
#	unilabos/resources/plr_additional_res_reg.py
#	unilabos/ros/nodes/base_device_node.py
#	unilabos/ros/nodes/presets/host_node.py
#	unilabos/ros/nodes/presets/workstation.py
#	unilabos/ros/nodes/resource_tracker.py
#	unilabos/utils/environment_check.py
#	unilabos_msgs/package.xml
2025-10-12 22:13:49 +08:00
Xuwznln
18b0bb397e Update recipe.yaml 2025-10-12 22:12:46 +08:00
Xuwznln
65abc5dbf7 Fix environment_check.py 2025-10-12 21:55:34 +08:00
Xuwznln
2455ca15ba Fix unilabos msgs search error 2025-10-12 21:39:06 +08:00
Xuwznln
05a3ff607a Try fix 'charmap' codec can't encode characters in position 16-23: character maps to <undefined> 2025-10-12 21:23:29 +08:00
Xuwznln
ec882df36d Fix FileNotFoundError 2025-10-12 21:00:18 +08:00
Xuwznln
43b992e3eb Update conda-pack-build.yml 2025-10-12 20:47:06 +08:00
Xuwznln
6422fa5a9a Update conda-pack-build.yml (with mamba) 2025-10-12 20:34:49 +08:00
Xuwznln
434b9e98e0 Update conda-pack-build.yml 2025-10-12 20:28:38 +08:00
Xuwznln
040073f430 Add version in __init__.py
Update conda-pack-build.yml
Add create_zip_archive.py
2025-10-12 20:28:04 +08:00
Xuwznln
3d95c9896a update conda-pack-build.yml 2025-10-12 19:41:34 +08:00
Xuwznln
9aa97ed01e update conda-pack-build.yml 2025-10-12 19:38:11 +08:00
Xuwznln
0b8bdf5e0a update conda-pack-build.yml 2025-10-12 19:34:16 +08:00
Xuwznln
299f010754 update conda-pack-build.yml 2025-10-12 19:27:25 +08:00
Xuwznln
15ce0d6883 update conda-pack-build.yml 2025-10-12 19:04:48 +08:00
Xuwznln
dec474e1a7 add auto install script for conda-pack-build.yml
(cherry picked from commit 172599adcf)
2025-10-12 18:53:10 +08:00
Xuwznln
5f187899fc add conda-pack-build.yml 2025-10-12 17:27:59 +08:00
Xuwznln
c8d16c7024 update todo 2025-10-11 13:53:17 +08:00
Junhan Chang
25d46dc9d5 pass the tests 2025-10-11 07:20:34 +08:00
Junhan Chang
88c4d1a9d1 modify bioyond/plr converter, bioyond resource registry, and tests 2025-10-11 04:59:59 +08:00
Xuwznln
81fd8291c5 update todo 2025-10-11 03:38:59 +08:00
Xuwznln
3a11eb90d4 feat: 允许返回非本节点物料,后面可以通过decoration进行区分,就不进行warning了 2025-10-11 03:38:14 +08:00
Xuwznln
387866b9c9 修复同步任务报错不显示的bug 2025-10-11 03:14:12 +08:00
Xuwznln
7f40f141f6 移动内部action以兼容host node 2025-10-11 03:11:17 +08:00
Xuwznln
6fc7ed1b88 过滤本地动作 2025-10-11 03:06:37 +08:00
Xuwznln
93f0e08d75 fix host_node test_resource error 2025-10-11 03:04:15 +08:00
Xuwznln
4b43734b55 fix host_node test_resource error 2025-10-11 02:57:14 +08:00
Xuwznln
174b1914d4 fix host_node error 2025-10-11 02:54:15 +08:00
Xuwznln
704e13f030 新增test_resource动作 2025-10-11 02:53:18 +08:00
Xuwznln
0c42d60cf2 更新transfer_resource_to_another参数,支持spot入参 2025-10-11 02:41:37 +08:00
Xuwznln
df33e1a214 修复transfer_resource_to_another生成 2025-10-11 01:12:56 +08:00
Xuwznln
1f49924966 修复资源添加 2025-10-11 00:58:56 +08:00
Xuwznln
609b6006e8 支持选择器注册表自动生成
支持转运物料
2025-10-11 00:57:22 +08:00
Xuwznln
67c01271b7 add update remove 2025-10-10 20:15:16 +08:00
Xuwznln
a1783f489e Merge remote-tracking branch 'origin/workstation_dev_YB2' into dev
# Conflicts:
#	unilabos/devices/workstation/bioyond_studio/bioyond_rpc.py
#	unilabos/devices/workstation/bioyond_studio/station.py
#	unilabos/resources/graphio.py
2025-10-10 15:38:45 +08:00
Xuwznln
a8f6527de9 修复to_plr_resources 2025-10-10 15:30:26 +08:00
ZiWei
54cfaf15f3 Workstation dev yb2 (#100)
* Refactor and extend reaction station action messages

* Refactor dispensing station tasks to enhance parameter clarity and add batch processing capabilities

- Updated `create_90_10_vial_feeding_task` to include detailed parameters for 90%/10% vial feeding, improving clarity and usability.
- Introduced `create_batch_90_10_vial_feeding_task` for batch processing of 90%/10% vial feeding tasks with JSON formatted input.
- Added `create_batch_diamine_solution_task` for batch preparation of diamine solution, also utilizing JSON formatted input.
- Refined `create_diamine_solution_task` to include additional parameters for better task configuration.
- Enhanced schema descriptions and default values for improved user guidance.
2025-10-10 15:25:50 +08:00
Xuwznln
5610c28b67 更新物料接口 2025-10-10 07:13:59 +08:00
Junhan Chang
cfc1ee6e79 Workstation templates: Resources and its CRUD, and workstation tasks (#95)
* coin_cell_station draft

* refactor: rename "station_resource" to "deck"

* add standardized BIOYOND resources: bottle_carrier, bottle

* refactor and add BIOYOND resources tests

* add BIOYOND deck assignment and pass all tests

* fix: update resource with correct structure; remove deprecated liquid_handler set_group action

* feat: 将新威电池测试系统驱动与配置文件并入 workstation_dev_YB2 (#92)

* feat: 新威电池测试系统驱动与注册文件

* feat: bring neware driver & battery.json into workstation_dev_YB2

* add bioyond studio draft

* bioyond station with communication init and resource sync

* fix bioyond station and registry

* create/update resources with POST/PUT for big amount/ small amount data

* refactor: add itemized_carrier instead of carrier consists of ResourceHolder

* create warehouse by factory func

* update bioyond launch json

* add child_size for itemized_carrier

* fix bioyond resource io

---------

Co-authored-by: h840473807 <47357934+h840473807@users.noreply.github.com>
Co-authored-by: Xie Qiming <97236197+Andy6M@users.noreply.github.com>
2025-09-30 17:23:13 +08:00
Junhan Chang
1c9d2ee98a fix bioyond resource io 2025-09-30 17:02:38 +08:00
Junhan Chang
3fe8f4ca44 add child_size for itemized_carrier 2025-09-30 12:58:42 +08:00
Junhan Chang
2476821dcc update bioyond launch json 2025-09-30 12:25:21 +08:00
Junhan Chang
7b426ed5ae create warehouse by factory func 2025-09-30 11:57:34 +08:00
Junhan Chang
9bbae96447 Merge branch 'workstation_dev_YB2' of https://github.com/dptech-corp/Uni-Lab-OS into workstation_dev_YB2 2025-09-29 21:02:05 +08:00
Junhan Chang
10aabb7592 refactor: add itemized_carrier instead of carrier consists of ResourceHolder 2025-09-29 20:36:45 +08:00
Junhan Chang
709eb0d91c Merge branch 'dev' of https://github.com/dptech-corp/Uni-Lab-OS into dev 2025-09-27 00:10:59 +08:00
Junhan Chang
14b7d52825 create/update resources with POST/PUT for big amount/ small amount data 2025-09-26 23:25:50 +08:00
Junhan Chang
a5397ffe12 create/update resources with POST/PUT for big amount/ small amount data 2025-09-26 23:25:34 +08:00
LccLink
c6c2da69ba frontend_docs 2025-09-26 23:20:22 +08:00
Junhan Chang
622e579063 fix: update resource with correct structure; remove deprecated liquid_handler set_group action 2025-09-26 20:24:15 +08:00
Junhan Chang
196e0f7e2b fix bioyond station and registry 2025-09-26 08:12:41 +08:00
Junhan Chang
a632fd495e bioyond station with communication init and resource sync 2025-09-25 20:56:29 +08:00
Junhan Chang
a8cc02a126 add bioyond studio draft 2025-09-25 20:36:52 +08:00
Xie Qiming
ad2e1432c6 feat: 将新威电池测试系统驱动与配置文件并入 workstation_dev_YB2 (#92)
* feat: 新威电池测试系统驱动与注册文件

* feat: bring neware driver & battery.json into workstation_dev_YB2
2025-09-25 18:53:04 +08:00
Junhan Chang
c3b9583eac fix: update resource with correct structure; remove deprecated liquid_handler set_group action 2025-09-25 15:27:05 +08:00
Junhan Chang
5c47cd0c8a add BIOYOND deck assignment and pass all tests 2025-09-25 08:41:41 +08:00
Junhan Chang
63ab1af45d refactor and add BIOYOND resources tests 2025-09-25 08:14:48 +08:00
Junhan Chang
a8419dc0c3 add standardized BIOYOND resources: bottle_carrier, bottle 2025-09-25 03:49:07 +08:00
Junhan Chang
34f05f2e25 refactor: rename "station_resource" to "deck" 2025-09-24 10:53:11 +08:00
h840473807
0dc2488f02 coin_cell_station draft 2025-09-23 01:18:04 +08:00
Junhan Chang
f13156e792 fix dict to tree/nested-dict converter 2025-09-23 00:02:45 +08:00
Xuwznln
13fd1ac572 更新物料接口 2025-09-22 17:14:48 +08:00
Guangxin Zhang
f8ef6e0686 Add Defaultlayout 2025-09-19 19:34:25 +01:00
Xuwznln
94a7b8aaca Update install md 2025-09-19 23:02:46 +08:00
Xuwznln
301bea639e 修复protocolnode的兼容性 2025-09-19 22:54:27 +08:00
Xuwznln
4b5a83efa4 修复protocolnode的兼容性 2025-09-19 21:09:07 +08:00
Xuwznln
2889e9be2c 更新所有注册表 2025-09-19 20:28:43 +08:00
Xuwznln
304aebbba7 bump version to 0.10.6 2025-09-19 19:55:34 +08:00
Xuwznln
091c9fa247 Merge branch 'workstation_dev' into dev
# Conflicts:
#	.conda/recipe.yaml
#	recipes/msgs/recipe.yaml
#	recipes/unilabos/recipe.yaml
#	setup.py
#	unilabos/registry/devices/work_station.yaml
#	unilabos/ros/nodes/base_device_node.py
#	unilabos/ros/nodes/presets/protocol_node.py
#	unilabos_msgs/package.xml
2025-09-19 19:52:53 +08:00
Xuwznln
67ca45a240 remove class for resource 2025-09-19 19:33:28 +08:00
Xuwznln
7aab2ea493 fix resource download 2025-09-19 19:17:03 +08:00
Xuwznln
62f3a6d696 PRCXI9320 json 2025-09-19 17:14:43 +08:00
Xuwznln
eb70ad0e18 PRCXI9320 json 2025-09-19 16:52:12 +08:00
Xuwznln
768f43880e PRCXI9320 json 2025-09-19 16:29:18 +08:00
Xuwznln
762c3c737c 重新补全zhida注册表 2025-09-19 11:45:57 +08:00
Xie Qiming
ace98a4472 Feature/xprbalance-zhida (#80)
* feat(devices): add Zhida GC/MS pretreatment automation workstation

* feat(devices): add mettler_toledo xpr balance

* balance
2025-09-19 11:43:25 +08:00
Xuwznln
41eaa88c6f 修复移液站错误的aspirate注册表 2025-09-19 07:05:09 +08:00
Xuwznln
a1a55a2c0a fix resource_add 2025-09-19 06:25:28 +08:00
Xuwznln
2eaa0ca729 try fix add protocol 2025-09-19 06:21:29 +08:00
Xuwznln
6f8f070f40 fix protocol node log_message, added create_resource return value 2025-09-19 05:36:47 +08:00
Xuwznln
da4bd927e0 fix protocol node log_message, added create_resource return value 2025-09-19 05:31:49 +08:00
Xuwznln
01f8816597 update registry with nested obj 2025-09-19 03:44:18 +08:00
Guangxin Zhang
e5006285df 重新规定了版位推荐的入参 2025-09-18 15:27:22 +01:00
Guangxin Zhang
573c724a5c 新增版位推荐功能 2025-09-17 21:07:19 +01:00
Xuwznln
09549d2839 resource_update use resource_add 2025-09-18 03:47:26 +08:00
Junhan Chang
50c7777cea Fix: run-column with correct vessel id (#86)
* fix run_column

* Update run_column_protocol.py

(cherry picked from commit e5aa4d940a)
2025-09-16 14:40:16 +08:00
Xuwznln
4888f02c09 add server timeout 2025-09-16 09:47:06 +08:00
Xuwznln
779c9693d9 refactor ws client 2025-09-16 05:24:42 +08:00
Xuwznln
ffa841a41a fix dupe upload registry 2025-09-15 16:25:41 +08:00
Xuwznln
fc669f09f8 fix import error 2025-09-15 15:55:44 +08:00
Xuwznln
2ca0311de6 移除MQTT,更新launch文档,提供注册表示例文件,更新到0.10.5 2025-09-15 02:39:43 +08:00
Guangxin Zhang
94cdcbf24e 对于PRCXI9320的transfer_group,一对多和多对多 2025-09-15 00:29:16 +08:00
Xuwznln
1cd07915e7 Correct runze pump multiple receive method. 2025-09-14 03:17:50 +08:00
Xuwznln
b600fc666d Correct runze pump multiple receive method. 2025-09-14 03:07:48 +08:00
Xuwznln
9e214c56c1 Update runze_multiple_backbone 2025-09-14 01:04:50 +08:00
Xuwznln
bdf27a7e82 Correct runze multiple backbone 2025-09-14 00:40:29 +08:00
Xuwznln
2493fb9f94 Update runze pump format 2025-09-14 00:22:39 +08:00
Xuwznln
c7a0ff67a9 support multiple backbone
(cherry picked from commit 4771ff2347)
2025-09-14 00:21:54 +08:00
Xuwznln
711a7c65fa remove runze multiple software obtainer
(cherry picked from commit 8bcc92a394)
2025-09-14 00:21:53 +08:00
Xuwznln
cde7956896 runze multiple pump support
(cherry picked from commit 49354fcf39)
2025-09-14 00:21:52 +08:00
Xuwznln
95b6fd0451 新增uat的地址替换 2025-09-11 16:38:17 +08:00
Xuwznln
513e848d89 result_info改为字典类型 2025-09-11 16:24:53 +08:00
Guangxin Zhang
58d1cc4720 Add set_group and transfer_group methods to PRCXI9300Handler and update liquid_handler.yaml 2025-09-10 21:23:15 +08:00
Guangxin Zhang
5676dd6589 Add LiquidHandlerSetGroup and LiquidHandlerTransferGroup actions to CMakeLists 2025-09-10 20:57:22 +08:00
Guangxin Zhang
1ae274a833 Add action definitions for LiquidHandlerSetGroup and LiquidHandlerTransferGroup
- Created LiquidHandlerSetGroup.action with fields for group name, wells, and volumes.
- Created LiquidHandlerTransferGroup.action with fields for source and target group names and unit volume.
- Both actions include response fields for return information and success status.
2025-09-10 20:57:16 +08:00
Xuwznln
22b88c8441 取消labid 和 强制config输入 2025-09-10 20:55:24 +08:00
Xuwznln
81bcc1907d fix: addr param 2025-09-10 20:14:33 +08:00
Xuwznln
8cffd3dc21 fix: addr param 2025-09-10 20:13:44 +08:00
Xuwznln
a722636938 增加addr参数 2025-09-10 20:01:10 +08:00
Xuwznln
f68340d932 修复status密集发送时,消息出错 2025-09-10 18:52:23 +08:00
Xuwznln
361eae2f6d 注册表编辑器 2025-09-07 20:57:48 +08:00
Xuwznln
c25283ae04 主机节点信息等支持自动刷新 2025-09-07 12:53:00 +08:00
Xuwznln
961752fb0d 更新schema的title字段 2025-09-07 00:43:23 +08:00
Xuwznln
55165024dd 修复async错误 2025-09-04 20:19:15 +08:00
Xuwznln
6ddceb8393 修复edge上报错误 2025-09-04 19:31:19 +08:00
Xuwznln
4e52c7d2f4 修复event loop错误 2025-09-04 17:11:50 +08:00
Xuwznln
0b56efc89d 增加handle检测,增加material edge关系上传 2025-09-04 16:46:25 +08:00
Xuwznln
a27b93396a 修复工站的tracker实例追踪失效问题 2025-09-04 02:51:13 +08:00
Xuwznln
2a60a6c27e 修正物料关系上传 2025-09-03 14:20:37 +08:00
Xuwznln
5dda94044d 增加物料关系上传日志 2025-09-03 12:31:25 +08:00
Xuwznln
0cfc6f45e3 增加物料关系上传日志 2025-09-03 12:20:54 +08:00
Xuwznln
831f4549f9 ws protocol 2025-09-02 18:51:27 +08:00
Xuwznln
f4d4eb06d3 ws test version 2 2025-09-02 18:29:05 +08:00
Xuwznln
e3b8164f6b ws test version 1 2025-09-02 14:32:02 +08:00
Xuwznln
78c04acc2e fix: missing job_id key 2025-09-01 16:34:23 +08:00
Xuwznln
cd0428ea78 fix: build 2025-08-30 12:24:28 +08:00
Xuwznln
bdddbd57ba fix: 还原protocol node处理方法 2025-08-30 12:22:46 +08:00
Xuwznln
a312de08a5 fix: station自己的方法注册错误 2025-08-30 12:20:24 +08:00
Xuwznln
68513b5745 feat: action status 2025-08-29 15:38:16 +08:00
Xuwznln
19027350fb feat: workstation example 2025-08-29 02:47:20 +08:00
Xuwznln
bbbdb06bbc feat: websocket test 2025-08-28 19:57:14 +08:00
Xuwznln
cd84e26126 feat: websocket 2025-08-28 14:34:38 +08:00
Junhan Chang
ce5bab3af1 example for use WorkstationBase 2025-08-27 15:20:20 +08:00
Junhan Chang
82d9ef6bf7 uncompleted refactor 2025-08-27 15:19:58 +08:00
Junhan Chang
332b33c6f4 simplify resource system 2025-08-27 11:13:56 +08:00
ZiWei
1ec642ee3a update: Workstation dev 将版本号从 0.10.3 更新为 0.10.4 (#84)
* Add:msgs.action

* update: 将版本号从 0.10.3 更新为 0.10.4
2025-08-27 01:55:28 +08:00
ZiWei
7d8e6d029b Add:msgs.action (#83) 2025-08-27 01:21:13 +08:00
Junhan Chang
5ec8a57a1f refactor: ProtocolNode→WorkstationNode 2025-08-25 22:09:37 +08:00
Junhan Chang
ae3c1100ae refactor: workstation_base 重构为仅含业务逻辑,通信和子设备管理交给 ProtocolNode 2025-08-22 06:43:43 +08:00
Junhan Chang
14bc2e6cda Create workstation_architecture.md 2025-08-21 10:09:57 +08:00
Junhan Chang
9f823a4198 update workstation base 2025-08-21 10:05:58 +08:00
Xuwznln
02c79363c1 feat: add sk & ak 2025-08-20 21:23:08 +08:00
Junhan Chang
227ff1284a add workstation template and battery example 2025-08-19 21:35:27 +08:00
Xuwznln
4b7bde6be5 Update recipe.yaml 2025-08-13 16:36:53 +08:00
Xuwznln
8a669ac35a fix: figure_resource 2025-08-13 13:23:02 +08:00
Junhan Chang
a1538da39e use call_async in all service to avoid deadlock 2025-08-13 04:25:51 +08:00
Xuwznln
0063df4cf3 fix: prcxi import error 2025-08-12 19:31:52 +08:00
Xuwznln
e570ba4976 临时兼容错误的driver写法 2025-08-12 19:20:53 +08:00
Xuwznln
e8c1f76dbb fix protocol node 2025-08-12 17:08:59 +08:00
Junhan Chang
f791c1a342 fix filter protocol 2025-08-12 16:48:32 +08:00
Junhan Chang
ea60cbe891 bugfixes on organic protocols 2025-08-12 14:50:01 +08:00
Junhan Chang
eac9b8ab3d fix and remove redundant info 2025-08-11 20:52:03 +08:00
Xuwznln
573bcf1a6c feat: 新增use_remote_resource参数 2025-08-11 16:09:27 +08:00
Junhan Chang
50e93cb1af fix all protocol_compilers and remove deprecated devices 2025-08-11 15:01:04 +08:00
Xuwznln
fe1a029a9b feat: 优化protocol node节点运行日志 2025-08-10 17:31:44 +08:00
Junhan Chang
662c063f50 fix pumps and liquid_handler handle 2025-08-07 20:59:57 +08:00
Xuwznln
01cbbba0b3 feat: workstation example 2025-08-07 15:26:17 +08:00
Xuwznln
e6c556cf19 add: prcxi res
fix: startup slow
2025-08-07 01:26:33 +08:00
Xuwznln
0605f305ed fix: prcxi_res 2025-08-06 23:06:22 +08:00
Xuwznln
37d8108ec4 fix: discard_tips 2025-08-06 19:27:10 +08:00
Xuwznln
6081dac561 fix: discard_tips error 2025-08-06 19:18:35 +08:00
Xuwznln
5b2d066127 fix: drop_tips not using auto resource select 2025-08-06 19:10:04 +08:00
ZiWei
06e66765e7 feat: 添加ChinWe设备控制类,支持串口通信和电机控制功能 (#79) 2025-08-06 18:49:37 +08:00
Xuwznln
98ce360088 feat: add trace log level 2025-08-04 20:27:02 +08:00
Xuwznln
5cd0f72fbd modify default discovery_interval to 15s 2025-08-04 14:10:43 +08:00
Xuwznln
343f394203 fix: working dir error when input config path
feat: report publish topic when error
2025-08-04 14:04:31 +08:00
Junhan Chang
46aa7a7bd2 fix: workstation handlers and vessel_id parsing 2025-08-04 10:24:42 +08:00
Junhan Chang
a66369e2c3 Cleanup registry to be easy-understanding (#76)
* delete deprecated mock devices

* rename categories

* combine chromatographic devices

* rename rviz simulation nodes

* organic virtual devices

* parse vessel_id

* run registry completion before merge

---------

Co-authored-by: Xuwznln <18435084+Xuwznln@users.noreply.github.com>
2025-08-03 11:21:37 +08:00
87 changed files with 28332 additions and 16797 deletions

View File

@@ -42,7 +42,7 @@ jobs:
defaults:
run:
# Windows uses cmd for better conda/mamba compatibility, Unix uses bash
shell: ${{ matrix.platform == 'win-64' && 'cmd /C CALL {0}' || 'bash -el {0}' }}
shell: ${{ matrix.platform == 'win-64' && 'cmd' || 'bash' }}
steps:
- name: Check if platform should be built
@@ -73,7 +73,6 @@ jobs:
channels: conda-forge,robostack-staging,uni-lab,defaults
channel-priority: flexible
activate-environment: unilab
auto-activate-base: true
auto-update-conda: false
show-channel-urls: true
@@ -82,7 +81,7 @@ jobs:
run: |
echo Installing unilabos and dependencies to unilab environment...
echo Using mamba for faster and more reliable dependency resolution...
mamba install uni-lab::unilabos conda-pack -c uni-lab -c robostack-staging -c conda-forge -y
mamba install -n unilab uni-lab::unilabos conda-pack -c uni-lab -c robostack-staging -c conda-forge -y
- name: Install conda-pack, unilabos and dependencies (Unix)
if: steps.should_build.outputs.should_build == 'true' && matrix.platform != 'win-64'
@@ -90,15 +89,15 @@ jobs:
run: |
echo "Installing unilabos and dependencies to unilab environment..."
echo "Using mamba for faster and more reliable dependency resolution..."
mamba install uni-lab::unilabos conda-pack -c uni-lab -c robostack-staging -c conda-forge -y
mamba install -n unilab uni-lab::unilabos conda-pack -c uni-lab -c robostack-staging -c conda-forge -y
- name: Get latest ros-humble-unilabos-msgs version (Windows)
if: steps.should_build.outputs.should_build == 'true' && matrix.platform == 'win-64'
id: msgs_version_win
run: |
echo Checking installed ros-humble-unilabos-msgs version...
conda list ros-humble-unilabos-msgs
for /f "tokens=2" %%i in ('conda list ros-humble-unilabos-msgs --json ^| python -c "import sys, json; pkgs=json.load(sys.stdin); print(pkgs[0]['version'] if pkgs else 'not-found')"') do set VERSION=%%i
conda list -n unilab ros-humble-unilabos-msgs
for /f "tokens=2" %%i in ('conda list -n unilab ros-humble-unilabos-msgs --json ^| python -c "import sys, json; pkgs=json.load(sys.stdin); print(pkgs[0]['version'] if pkgs else 'not-found')"') do set VERSION=%%i
echo installed_version=%VERSION% >> %GITHUB_OUTPUT%
echo Installed ros-humble-unilabos-msgs version: %VERSION%
@@ -108,7 +107,7 @@ jobs:
shell: bash
run: |
echo "Checking installed ros-humble-unilabos-msgs version..."
VERSION=$(conda list ros-humble-unilabos-msgs --json | python -c "import sys, json; pkgs=json.load(sys.stdin); print(pkgs[0]['version'] if pkgs else 'not-found')")
VERSION=$(conda list -n unilab ros-humble-unilabos-msgs --json | python -c "import sys, json; pkgs=json.load(sys.stdin); print(pkgs[0]['version'] if pkgs else 'not-found')")
echo "installed_version=$VERSION" >> $GITHUB_OUTPUT
echo "Installed ros-humble-unilabos-msgs version: $VERSION"
@@ -119,7 +118,7 @@ jobs:
mamba search ros-humble-unilabos-msgs -c uni-lab -c robostack-staging -c conda-forge || echo Search completed
echo.
echo Updating ros-humble-unilabos-msgs to latest version...
mamba update ros-humble-unilabos-msgs -c uni-lab -c robostack-staging -c conda-forge -y || echo Already at latest version
mamba update -n unilab ros-humble-unilabos-msgs -c uni-lab -c robostack-staging -c conda-forge -y || echo Already at latest version
- name: Check for newer ros-humble-unilabos-msgs (Unix)
if: steps.should_build.outputs.should_build == 'true' && matrix.platform != 'win-64'
@@ -129,65 +128,65 @@ jobs:
mamba search ros-humble-unilabos-msgs -c uni-lab -c robostack-staging -c conda-forge || echo "Search completed"
echo ""
echo "Updating ros-humble-unilabos-msgs to latest version..."
mamba update ros-humble-unilabos-msgs -c uni-lab -c robostack-staging -c conda-forge -y || echo "Already at latest version"
mamba update -n unilab ros-humble-unilabos-msgs -c uni-lab -c robostack-staging -c conda-forge -y || echo "Already at latest version"
- name: Install latest unilabos from source (Windows)
if: steps.should_build.outputs.should_build == 'true' && matrix.platform == 'win-64'
run: |
echo Uninstalling existing unilabos...
pip uninstall unilabos -y || echo unilabos not installed via pip
mamba run -n unilab pip uninstall unilabos -y || echo unilabos not installed via pip
echo Installing unilabos from source (branch: ${{ github.event.inputs.branch }})...
pip install .
mamba run -n unilab pip install .
echo Verifying installation...
pip show unilabos
mamba run -n unilab pip show unilabos
- name: Install latest unilabos from source (Unix)
if: steps.should_build.outputs.should_build == 'true' && matrix.platform != 'win-64'
shell: bash
run: |
echo "Uninstalling existing unilabos..."
pip uninstall unilabos -y || echo "unilabos not installed via pip"
mamba run -n unilab pip uninstall unilabos -y || echo "unilabos not installed via pip"
echo "Installing unilabos from source (branch: ${{ github.event.inputs.branch }})..."
pip install .
mamba run -n unilab pip install .
echo "Verifying installation..."
pip show unilabos
mamba run -n unilab pip show unilabos
- name: Display environment info (Windows)
if: steps.should_build.outputs.should_build == 'true' && matrix.platform == 'win-64'
run: |
echo === Environment Information ===
conda env list
mamba env list
echo.
echo === Installed Packages ===
conda list | findstr /C:"unilabos" /C:"ros-humble-unilabos-msgs" || conda list
mamba list -n unilab | findstr /C:"unilabos" /C:"ros-humble-unilabos-msgs" || mamba list -n unilab
echo.
echo === Python Packages ===
pip list | findstr unilabos || pip list
mamba run -n unilab pip list | findstr unilabos || mamba run -n unilab pip list
- name: Display environment info (Unix)
if: steps.should_build.outputs.should_build == 'true' && matrix.platform != 'win-64'
shell: bash
run: |
echo "=== Environment Information ==="
conda env list
mamba env list
echo ""
echo "=== Installed Packages ==="
conda list | grep -E "(unilabos|ros-humble-unilabos-msgs)" || conda list
mamba list -n unilab | grep -E "(unilabos|ros-humble-unilabos-msgs)" || mamba list -n unilab
echo ""
echo "=== Python Packages ==="
pip list | grep unilabos || pip list
mamba run -n unilab pip list | grep unilabos || mamba run -n unilab pip list
- name: Verify environment integrity (Windows)
if: steps.should_build.outputs.should_build == 'true' && matrix.platform == 'win-64'
run: |
echo Verifying Python version...
python -c "import sys; print(f'Python version: {sys.version}')"
mamba run -n unilab python -c "import sys; print(f'Python version: {sys.version}')"
echo Verifying unilabos import...
python -c "import unilabos; print(f'UniLabOS version: {unilabos.__version__}')" || echo Warning: Could not import unilabos
mamba run -n unilab python -c "import unilabos; print(f'UniLabOS version: {unilabos.__version__}')" || echo Warning: Could not import unilabos
echo Checking critical packages...
python -c "import rclpy; print('ROS2 rclpy: OK')"
mamba run -n unilab python -c "import rclpy; print('ROS2 rclpy: OK')"
echo Running comprehensive verification script...
python scripts\verify_installation.py || echo Warning: Verification script reported issues
mamba run -n unilab python scripts\verify_installation.py --auto-install || echo Warning: Verification script reported issues
echo Environment verification complete!
- name: Verify environment integrity (Unix)
@@ -195,20 +194,20 @@ jobs:
shell: bash
run: |
echo "Verifying Python version..."
python -c "import sys; print(f'Python version: {sys.version}')"
mamba run -n unilab python -c "import sys; print(f'Python version: {sys.version}')"
echo "Verifying unilabos import..."
python -c "import unilabos; print(f'UniLabOS version: {unilabos.__version__}')" || echo "Warning: Could not import unilabos"
mamba run -n unilab python -c "import unilabos; print(f'UniLabOS version: {unilabos.__version__}')" || echo "Warning: Could not import unilabos"
echo "Checking critical packages..."
python -c "import rclpy; print('ROS2 rclpy: OK')"
mamba run -n unilab python -c "import rclpy; print('ROS2 rclpy: OK')"
echo "Running comprehensive verification script..."
python scripts/verify_installation.py || echo "Warning: Verification script reported issues"
mamba run -n unilab python scripts/verify_installation.py --auto-install || echo "Warning: Verification script reported issues"
echo "Environment verification complete!"
- name: Pack conda environment (Windows)
if: steps.should_build.outputs.should_build == 'true' && matrix.platform == 'win-64'
run: |
echo Packing unilab environment with conda-pack...
conda pack -n unilab -o unilab-env-${{ matrix.platform }}.tar.gz --ignore-missing-files
mamba activate unilab && conda pack -n unilab -o unilab-env-${{ matrix.platform }}.tar.gz --ignore-missing-files
echo Pack file created:
dir unilab-env-${{ matrix.platform }}.tar.gz
@@ -217,6 +216,7 @@ jobs:
shell: bash
run: |
echo "Packing unilab environment with conda-pack..."
mamba install conda-pack -c conda-forge -y
conda pack -n unilab -o unilab-env-${{ matrix.platform }}.tar.gz --ignore-missing-files
echo "Pack file created:"
ls -lh unilab-env-${{ matrix.platform }}.tar.gz
@@ -242,6 +242,10 @@ jobs:
echo Adding: verify_installation.py
copy scripts\verify_installation.py dist-package\
rem Copy source code repository (including .git)
echo Adding: Uni-Lab-OS source repository
robocopy . dist-package\Uni-Lab-OS /E /XD dist-package /NFL /NDL /NJH /NJS /NC /NS || if %ERRORLEVEL% LSS 8 exit /b 0
rem Create README using Python script
echo Creating: README.txt
python scripts\create_readme.py ${{ matrix.platform }} ${{ github.event.inputs.branch }} dist-package\README.txt
@@ -274,6 +278,10 @@ jobs:
echo "Adding: verify_installation.py"
cp scripts/verify_installation.py dist-package/
# Copy source code repository (including .git)
echo "Adding: Uni-Lab-OS source repository"
rsync -a --exclude='dist-package' . dist-package/Uni-Lab-OS
# Create README using Python script
echo "Creating: README.txt"
python scripts/create_readme.py ${{ matrix.platform }} ${{ github.event.inputs.branch }} dist-package/README.txt
@@ -283,46 +291,6 @@ jobs:
ls -lh dist-package/
echo ""
- name: Finalize Windows distribution package
if: steps.should_build.outputs.should_build == 'true' && matrix.platform == 'win-64'
run: |
echo ==========================================
echo Windows distribution package ready
echo.
echo Package will be uploaded as artifact
echo GitHub Actions will automatically create ZIP
echo.
echo Contents:
dir /b dist-package
echo.
echo Users will download a ZIP containing:
echo - install_unilab.bat
echo - unilab-env-${{ matrix.platform }}.tar.gz
echo - verify_installation.py
echo - README.txt
echo ==========================================
- name: Create Unix/Linux TAR.GZ archive
if: steps.should_build.outputs.should_build == 'true' && matrix.platform != 'win-64'
shell: bash
run: |
echo "=========================================="
echo "Creating Unix/Linux TAR.GZ archive..."
echo "Archive: unilab-pack-${{ matrix.platform }}.tar.gz"
echo "Contents: install_unilab.sh + unilab-env-${{ matrix.platform }}.tar.gz + extras"
tar -czf unilab-pack-${{ matrix.platform }}.tar.gz -C dist-package .
echo "=========================================="
echo ""
echo "Final package created:"
ls -lh unilab-pack-*
echo ""
echo "Users can now:"
echo " 1. Download unilab-pack-${{ matrix.platform }}.tar.gz"
echo " 2. Extract it: tar -xzf unilab-pack-${{ matrix.platform }}.tar.gz"
echo " 3. Run: bash install_unilab.sh"
echo ""
- name: Upload distribution package
if: steps.should_build.outputs.should_build == 'true'
uses: actions/upload-artifact@v4
@@ -365,12 +333,8 @@ jobs:
echo "Distribution package contents:"
ls -lh dist-package/
echo ""
echo "Package size (tar.gz):"
ls -lh unilab-pack-*.tar.gz
echo ""
echo "Artifact name: unilab-pack-${{ matrix.platform }}-${{ github.event.inputs.branch }}"
echo ""
echo "After download:"
echo " - Windows/macOS: Extract ZIP, then: tar -xzf unilab-pack-${{ matrix.platform }}.tar.gz"
echo " - Linux: Extract ZIP (or download tar.gz directly), run install_unilab.sh"
echo " install_unilab.sh"
echo "=========================================="

View File

@@ -39,24 +39,39 @@ jobs:
uses: actions/checkout@v4
with:
ref: ${{ github.event.inputs.branch || github.ref }}
fetch-depth: 0
- name: Setup Python environment
uses: actions/setup-python@v5
- name: Setup Miniforge (with mamba)
uses: conda-incubator/setup-miniconda@v3
with:
python-version: '3.10'
miniforge-version: latest
use-mamba: true
python-version: '3.11.11'
channels: conda-forge,robostack-staging,uni-lab,defaults
channel-priority: flexible
activate-environment: unilab
auto-update-conda: false
show-channel-urls: true
- name: Install system dependencies
- name: Install unilabos and dependencies
run: |
sudo apt-get update
sudo apt-get install -y pandoc
echo "Installing unilabos and dependencies to unilab environment..."
echo "Using mamba for faster and more reliable dependency resolution..."
mamba install -n unilab uni-lab::unilabos -c uni-lab -c robostack-staging -c conda-forge -y
- name: Install Python dependencies
- name: Install latest unilabos from source
run: |
python -m pip install --upgrade pip
# Install package in development mode to get version info
pip install -e .
# Install documentation dependencies
pip install -r docs/requirements.txt
echo "Uninstalling existing unilabos..."
mamba run -n unilab pip uninstall unilabos -y || echo "unilabos not installed via pip"
echo "Installing unilabos from source..."
mamba run -n unilab pip install .
echo "Verifying installation..."
mamba run -n unilab pip show unilabos
- name: Install documentation dependencies
run: |
echo "Installing documentation build dependencies..."
mamba run -n unilab pip install -r docs/requirements.txt
- name: Setup Pages
id: pages
@@ -68,8 +83,8 @@ jobs:
cd docs
# Clean previous builds
rm -rf _build
# Build HTML documentation
python -m sphinx -b html . _build/html -v
# Build HTML documentation in conda environment
mamba run -n unilab python -m sphinx -b html . _build/html -v
- name: Check build results
run: |

View File

@@ -31,7 +31,7 @@ Join the [Intelligent Organic Chemistry Synthesis Competition](https://bohrium.d
Detailed documentation can be found at:
- [Online Documentation](https://dptech-corp.github.io/Uni-Lab-OS/)
- [Online Documentation](https://xuwznln.github.io/Uni-Lab-OS-Doc/)
## Quick Start
@@ -55,7 +55,7 @@ pip install .
3. Start Uni-Lab System:
Please refer to [Documentation - Boot Examples](https://dptech-corp.github.io/Uni-Lab-OS/boot_examples/index.html)
Please refer to [Documentation - Boot Examples](https://xuwznln.github.io/Uni-Lab-OS-Doc/boot_examples/index.html)
## Message Format

View File

@@ -31,7 +31,7 @@ Uni-Lab-OS 是一个用于实验室自动化的综合平台,旨在连接和控
详细文档可在以下位置找到:
- [在线文档](https://dptech-corp.github.io/Uni-Lab-OS/)
- [在线文档](https://xuwznln.github.io/Uni-Lab-OS-Doc/)
## 快速开始
@@ -57,7 +57,7 @@ pip install .
3. 启动 Uni-Lab 系统:
请见[文档-启动样例](https://dptech-corp.github.io/Uni-Lab-OS/boot_examples/index.html)
请见[文档-启动样例](https://xuwznln.github.io/Uni-Lab-OS-Doc/boot_examples/index.html)
## 消息格式

14473
bioyond_yihua_YB.json Normal file

File diff suppressed because it is too large Load Diff

File diff suppressed because it is too large Load Diff

View File

@@ -91,7 +91,7 @@
使用以下命令启动模拟反应器:
```bash
unilab -g test/experiments/mock_reactor.json --app_bridges ""
unilab -g test/experiments/mock_reactor.json
```
### 2. 执行抽真空和充气操作

View File

@@ -23,7 +23,7 @@ extensions = [
"myst_parser",
"sphinx.ext.autodoc",
"sphinx.ext.napoleon", # 如果您使用 Google 或 NumPy 风格的 docstrings
"sphinx_rtd_theme"
"sphinx_rtd_theme",
]
source_suffix = {

38
new_cellconfig3c.json Normal file
View File

@@ -0,0 +1,38 @@
{
"nodes": [
{
"id": "bioyond_cell_workstation",
"name": "配液分液工站",
"children": [
],
"parent": null,
"type": "device",
"class": "bioyond_cell",
"config": {
"protocol_type": [],
"station_resource": {}
},
"data": {}
},
{
"id": "BatteryStation",
"name": "扣电工作站",
"children": [
"coin_cell_deck"
],
"parent": null,
"type": "device",
"class": "coincellassemblyworkstation_device",
"position": {
"x": 600,
"y": 400,
"z": 0
},
"config": {
"debug_mode": false,
"protocol_type": []
}
}
],
"links": []
}

View File

@@ -172,7 +172,7 @@ Examples:
with open(output_path, "w", encoding="utf-8") as f:
f.write(readme_content)
print(f" README.txt created: {output_path}")
print(f" README.txt created: {output_path}")
print(f" Platform: {args.platform}")
print(f" Branch: {args.branch}")

View File

@@ -8,7 +8,10 @@ This script verifies that UniLabOS and its dependencies are correctly installed.
Run this script after installing the conda-pack environment to ensure everything works.
Usage:
python verify_installation.py
python verify_installation.py [--auto-install]
Options:
--auto-install Automatically install missing packages
Or in the conda environment:
conda activate unilab
@@ -17,14 +20,15 @@ Usage:
import sys
import os
import argparse
# IMPORTANT: Set UTF-8 encoding BEFORE any other imports
# This ensures all subsequent imports (including unilabos) can output UTF-8 characters
if sys.platform == "win32":
# Method 1: Reconfigure stdout/stderr to use UTF-8 with error handling
try:
sys.stdout.reconfigure(encoding="utf-8", errors="replace")
sys.stderr.reconfigure(encoding="utf-8", errors="replace")
sys.stdout.reconfigure(encoding="utf-8", errors="replace") # type: ignore
sys.stderr.reconfigure(encoding="utf-8", errors="replace") # type: ignore
except (AttributeError, OSError):
pass
@@ -49,7 +53,7 @@ CHECK_MARK = "[OK]"
CROSS_MARK = "[FAIL]"
def check_package(package_name: str, display_name: str = None) -> bool:
def check_package(package_name: str, display_name: str | None = None) -> bool:
"""
Check if a package can be imported.
@@ -87,9 +91,25 @@ def check_python_version() -> bool:
def main():
"""Run all verification checks."""
# Parse command line arguments
parser = argparse.ArgumentParser(
description="Verify UniLabOS installation",
formatter_class=argparse.RawDescriptionHelpFormatter,
)
parser.add_argument(
"--auto-install",
action="store_true",
help="Automatically install missing packages",
)
args = parser.parse_args()
print("=" * 60)
print("UniLabOS Installation Verification")
print("=" * 60)
if args.auto_install:
print("Mode: Auto-install missing packages")
else:
print("Mode: Verification only")
print()
all_passed = True
@@ -113,14 +133,16 @@ def main():
print(f" {CHECK_MARK} UniLabOS installed")
# Check environment without auto-install (verification only)
# Check environment with optional auto-install
# Set show_details=False to suppress detailed Chinese output that may cause encoding issues
env_check_passed = check_environment(auto_install=False, show_details=False)
env_check_passed = check_environment(auto_install=args.auto_install, show_details=False)
if env_check_passed:
print(f" {CHECK_MARK} All required packages available")
else:
print(f" {CROSS_MARK} Some optional packages are missing")
if not args.auto_install:
print(" Hint: Run with --auto-install to automatically install missing packages")
except ImportError:
print(f" {CROSS_MARK} UniLabOS not installed")
all_passed = False

695
scripts/workflow.py Normal file
View File

@@ -0,0 +1,695 @@
import json
import logging
import traceback
import uuid
import xml.etree.ElementTree as ET
from typing import Any, Dict, List
import networkx as nx
import matplotlib.pyplot as plt
import requests
logger = logging.getLogger(__name__)
class SimpleGraph:
"""简单的有向图实现,用于构建工作流图"""
def __init__(self):
self.nodes = {}
self.edges = []
def add_node(self, node_id, **attrs):
"""添加节点"""
self.nodes[node_id] = attrs
def add_edge(self, source, target, **attrs):
"""添加边"""
edge = {"source": source, "target": target, **attrs}
self.edges.append(edge)
def to_dict(self):
"""转换为工作流图格式"""
nodes_list = []
for node_id, attrs in self.nodes.items():
node_attrs = attrs.copy()
params = node_attrs.pop("parameters", {}) or {}
node_attrs.update(params)
nodes_list.append({"id": node_id, **node_attrs})
return {
"directed": True,
"multigraph": False,
"graph": {},
"nodes": nodes_list,
"links": self.edges,
}
def extract_json_from_markdown(text: str) -> str:
"""从markdown代码块中提取JSON"""
text = text.strip()
if text.startswith("```json\n"):
text = text[8:]
if text.startswith("```\n"):
text = text[4:]
if text.endswith("\n```"):
text = text[:-4]
return text
def convert_to_type(val: str) -> Any:
"""将字符串值转换为适当的数据类型"""
if val == "True":
return True
if val == "False":
return False
if val == "?":
return None
if val.endswith(" g"):
return float(val.split(" ")[0])
if val.endswith("mg"):
return float(val.split("mg")[0])
elif val.endswith("mmol"):
return float(val.split("mmol")[0]) / 1000
elif val.endswith("mol"):
return float(val.split("mol")[0])
elif val.endswith("ml"):
return float(val.split("ml")[0])
elif val.endswith("RPM"):
return float(val.split("RPM")[0])
elif val.endswith(" °C"):
return float(val.split(" ")[0])
elif val.endswith(" %"):
return float(val.split(" ")[0])
return val
def refactor_data(data: List[Dict[str, Any]]) -> List[Dict[str, Any]]:
"""统一的数据重构函数,根据操作类型自动选择模板"""
refactored_data = []
# 定义操作映射,包含生物实验和有机化学的所有操作
OPERATION_MAPPING = {
# 生物实验操作
"transfer_liquid": "SynBioFactory-liquid_handler.prcxi-transfer_liquid",
"transfer": "SynBioFactory-liquid_handler.biomek-transfer",
"incubation": "SynBioFactory-liquid_handler.biomek-incubation",
"move_labware": "SynBioFactory-liquid_handler.biomek-move_labware",
"oscillation": "SynBioFactory-liquid_handler.biomek-oscillation",
# 有机化学操作
"HeatChillToTemp": "SynBioFactory-workstation-HeatChillProtocol",
"StopHeatChill": "SynBioFactory-workstation-HeatChillStopProtocol",
"StartHeatChill": "SynBioFactory-workstation-HeatChillStartProtocol",
"HeatChill": "SynBioFactory-workstation-HeatChillProtocol",
"Dissolve": "SynBioFactory-workstation-DissolveProtocol",
"Transfer": "SynBioFactory-workstation-TransferProtocol",
"Evaporate": "SynBioFactory-workstation-EvaporateProtocol",
"Recrystallize": "SynBioFactory-workstation-RecrystallizeProtocol",
"Filter": "SynBioFactory-workstation-FilterProtocol",
"Dry": "SynBioFactory-workstation-DryProtocol",
"Add": "SynBioFactory-workstation-AddProtocol",
}
UNSUPPORTED_OPERATIONS = ["Purge", "Wait", "Stir", "ResetHandling"]
for step in data:
operation = step.get("action")
if not operation or operation in UNSUPPORTED_OPERATIONS:
continue
# 处理重复操作
if operation == "Repeat":
times = step.get("times", step.get("parameters", {}).get("times", 1))
sub_steps = step.get("steps", step.get("parameters", {}).get("steps", []))
for i in range(int(times)):
sub_data = refactor_data(sub_steps)
refactored_data.extend(sub_data)
continue
# 获取模板名称
template = OPERATION_MAPPING.get(operation)
if not template:
# 自动推断模板类型
if operation.lower() in ["transfer", "incubation", "move_labware", "oscillation"]:
template = f"SynBioFactory-liquid_handler.biomek-{operation}"
else:
template = f"SynBioFactory-workstation-{operation}Protocol"
# 创建步骤数据
step_data = {
"template": template,
"description": step.get("description", step.get("purpose", f"{operation} operation")),
"lab_node_type": "Device",
"parameters": step.get("parameters", step.get("action_args", {})),
}
refactored_data.append(step_data)
return refactored_data
def build_protocol_graph(
labware_info: List[Dict[str, Any]], protocol_steps: List[Dict[str, Any]], workstation_name: str
) -> SimpleGraph:
"""统一的协议图构建函数,根据设备类型自动选择构建逻辑"""
G = SimpleGraph()
resource_last_writer = {}
LAB_NAME = "SynBioFactory"
protocol_steps = refactor_data(protocol_steps)
# 检查协议步骤中的模板来判断协议类型
has_biomek_template = any(
("biomek" in step.get("template", "")) or ("prcxi" in step.get("template", ""))
for step in protocol_steps
)
if has_biomek_template:
# 生物实验协议图构建
for labware_id, labware in labware_info.items():
node_id = str(uuid.uuid4())
labware_attrs = labware.copy()
labware_id = labware_attrs.pop("id", labware_attrs.get("name", f"labware_{uuid.uuid4()}"))
labware_attrs["description"] = labware_id
labware_attrs["lab_node_type"] = (
"Reagent" if "Plate" in str(labware_id) else "Labware" if "Rack" in str(labware_id) else "Sample"
)
labware_attrs["device_id"] = workstation_name
G.add_node(node_id, template=f"{LAB_NAME}-host_node-create_resource", **labware_attrs)
resource_last_writer[labware_id] = f"{node_id}:labware"
# 处理协议步骤
prev_node = None
for i, step in enumerate(protocol_steps):
node_id = str(uuid.uuid4())
G.add_node(node_id, **step)
# 添加控制流边
if prev_node is not None:
G.add_edge(prev_node, node_id, source_port="ready", target_port="ready")
prev_node = node_id
# 处理物料流
params = step.get("parameters", {})
if "sources" in params and params["sources"] in resource_last_writer:
source_node, source_port = resource_last_writer[params["sources"]].split(":")
G.add_edge(source_node, node_id, source_port=source_port, target_port="labware")
if "targets" in params:
resource_last_writer[params["targets"]] = f"{node_id}:labware"
# 添加协议结束节点
end_id = str(uuid.uuid4())
G.add_node(end_id, template=f"{LAB_NAME}-liquid_handler.biomek-run_protocol")
if prev_node is not None:
G.add_edge(prev_node, end_id, source_port="ready", target_port="ready")
else:
# 有机化学协议图构建
WORKSTATION_ID = workstation_name
# 为所有labware创建资源节点
for item_id, item in labware_info.items():
# item_id = item.get("id") or item.get("name", f"item_{uuid.uuid4()}")
node_id = str(uuid.uuid4())
# 判断节点类型
if item.get("type") == "hardware" or "reactor" in str(item_id).lower():
if "reactor" not in str(item_id).lower():
continue
lab_node_type = "Sample"
description = f"Prepare Reactor: {item_id}"
liquid_type = []
liquid_volume = []
else:
lab_node_type = "Reagent"
description = f"Add Reagent to Flask: {item_id}"
liquid_type = [item_id]
liquid_volume = [1e5]
G.add_node(
node_id,
template=f"{LAB_NAME}-host_node-create_resource",
description=description,
lab_node_type=lab_node_type,
res_id=item_id,
device_id=WORKSTATION_ID,
class_name="container",
parent=WORKSTATION_ID,
bind_locations={"x": 0.0, "y": 0.0, "z": 0.0},
liquid_input_slot=[-1],
liquid_type=liquid_type,
liquid_volume=liquid_volume,
slot_on_deck="",
role=item.get("role", ""),
)
resource_last_writer[item_id] = f"{node_id}:labware"
last_control_node_id = None
# 处理协议步骤
for step in protocol_steps:
node_id = str(uuid.uuid4())
G.add_node(node_id, **step)
# 控制流
if last_control_node_id is not None:
G.add_edge(last_control_node_id, node_id, source_port="ready", target_port="ready")
last_control_node_id = node_id
# 物料流
params = step.get("parameters", {})
input_resources = {
"Vessel": params.get("vessel"),
"ToVessel": params.get("to_vessel"),
"FromVessel": params.get("from_vessel"),
"reagent": params.get("reagent"),
"solvent": params.get("solvent"),
"compound": params.get("compound"),
"sources": params.get("sources"),
"targets": params.get("targets"),
}
for target_port, resource_name in input_resources.items():
if resource_name and resource_name in resource_last_writer:
source_node, source_port = resource_last_writer[resource_name].split(":")
G.add_edge(source_node, node_id, source_port=source_port, target_port=target_port)
output_resources = {
"VesselOut": params.get("vessel"),
"FromVesselOut": params.get("from_vessel"),
"ToVesselOut": params.get("to_vessel"),
"FiltrateOut": params.get("filtrate_vessel"),
"reagent": params.get("reagent"),
"solvent": params.get("solvent"),
"compound": params.get("compound"),
"sources_out": params.get("sources"),
"targets_out": params.get("targets"),
}
for source_port, resource_name in output_resources.items():
if resource_name:
resource_last_writer[resource_name] = f"{node_id}:{source_port}"
return G
def draw_protocol_graph(protocol_graph: SimpleGraph, output_path: str):
"""
(辅助功能) 使用 networkx 和 matplotlib 绘制协议工作流图,用于可视化。
"""
if not protocol_graph:
print("Cannot draw graph: Graph object is empty.")
return
G = nx.DiGraph()
for node_id, attrs in protocol_graph.nodes.items():
label = attrs.get("description", attrs.get("template", node_id[:8]))
G.add_node(node_id, label=label, **attrs)
for edge in protocol_graph.edges:
G.add_edge(edge["source"], edge["target"])
plt.figure(figsize=(20, 15))
try:
pos = nx.nx_agraph.graphviz_layout(G, prog="dot")
except Exception:
pos = nx.shell_layout(G) # Fallback layout
node_labels = {node: data["label"] for node, data in G.nodes(data=True)}
nx.draw(
G,
pos,
with_labels=False,
node_size=2500,
node_color="skyblue",
node_shape="o",
edge_color="gray",
width=1.5,
arrowsize=15,
)
nx.draw_networkx_labels(G, pos, labels=node_labels, font_size=8, font_weight="bold")
plt.title("Chemical Protocol Workflow Graph", size=15)
plt.savefig(output_path, dpi=300, bbox_inches="tight")
plt.close()
print(f" - Visualization saved to '{output_path}'")
from networkx.drawing.nx_agraph import to_agraph
import re
COMPASS = {"n","e","s","w","ne","nw","se","sw","c"}
def _is_compass(port: str) -> bool:
return isinstance(port, str) and port.lower() in COMPASS
def draw_protocol_graph_with_ports(protocol_graph, output_path: str, rankdir: str = "LR"):
"""
使用 Graphviz 端口语法绘制协议工作流图。
- 若边上的 source_port/target_port 是 compassn/e/s/w/...),直接用 compass。
- 否则自动为节点创建 record 形状并定义命名端口 <portname>。
最终由 PyGraphviz 渲染并输出到 output_path后缀决定格式如 .png/.svg/.pdf
"""
if not protocol_graph:
print("Cannot draw graph: Graph object is empty.")
return
# 1) 先用 networkx 搭建有向图,保留端口属性
G = nx.DiGraph()
for node_id, attrs in protocol_graph.nodes.items():
label = attrs.get("description", attrs.get("template", node_id[:8]))
# 保留一个干净的“中心标签”,用于放在 record 的中间槽
G.add_node(node_id, _core_label=str(label), **{k:v for k,v in attrs.items() if k not in ("label",)})
edges_data = []
in_ports_by_node = {} # 收集命名输入端口
out_ports_by_node = {} # 收集命名输出端口
for edge in protocol_graph.edges:
u = edge["source"]
v = edge["target"]
sp = edge.get("source_port")
tp = edge.get("target_port")
# 记录到图里(保留原始端口信息)
G.add_edge(u, v, source_port=sp, target_port=tp)
edges_data.append((u, v, sp, tp))
# 如果不是 compass就按“命名端口”先归类等会儿给节点造 record
if sp and not _is_compass(sp):
out_ports_by_node.setdefault(u, set()).add(str(sp))
if tp and not _is_compass(tp):
in_ports_by_node.setdefault(v, set()).add(str(tp))
# 2) 转为 AGraph使用 Graphviz 渲染
A = to_agraph(G)
A.graph_attr.update(rankdir=rankdir, splines="true", concentrate="false", fontsize="10")
A.node_attr.update(shape="box", style="rounded,filled", fillcolor="lightyellow", color="#999999", fontname="Helvetica")
A.edge_attr.update(arrowsize="0.8", color="#666666")
# 3) 为需要命名端口的节点设置 record 形状与 label
# 左列 = 输入端口;中间 = 核心标签;右列 = 输出端口
for n in A.nodes():
node = A.get_node(n)
core = G.nodes[n].get("_core_label", n)
in_ports = sorted(in_ports_by_node.get(n, []))
out_ports = sorted(out_ports_by_node.get(n, []))
# 如果该节点涉及命名端口,则用 record否则保留原 box
if in_ports or out_ports:
def port_fields(ports):
if not ports:
return " " # 必须留一个空槽占位
# 每个端口一个小格子,<p> name
return "|".join(f"<{re.sub(r'[^A-Za-z0-9_:.|-]', '_', p)}> {p}" for p in ports)
left = port_fields(in_ports)
right = port_fields(out_ports)
# 三栏:左(入) | 中(节点名) | 右(出)
record_label = f"{{ {left} | {core} | {right} }}"
node.attr.update(shape="record", label=record_label)
else:
# 没有命名端口:普通盒子,显示核心标签
node.attr.update(label=str(core))
# 4) 给边设置 headport / tailport
# - 若端口为 compass直接用 compasse.g., headport="e"
# - 若端口为命名端口:使用在 record 中定义的 <port> 名(同名即可)
for (u, v, sp, tp) in edges_data:
e = A.get_edge(u, v)
# Graphviz 属性tail 是源head 是目标
if sp:
if _is_compass(sp):
e.attr["tailport"] = sp.lower()
else:
# 与 record label 中 <port> 名一致;特殊字符已在 label 中做了清洗
e.attr["tailport"] = re.sub(r'[^A-Za-z0-9_:.|-]', '_', str(sp))
if tp:
if _is_compass(tp):
e.attr["headport"] = tp.lower()
else:
e.attr["headport"] = re.sub(r'[^A-Za-z0-9_:.|-]', '_', str(tp))
# 可选:若想让边更贴边缘,可设置 constraint/spline 等
# e.attr["arrowhead"] = "vee"
# 5) 输出
A.draw(output_path, prog="dot")
print(f" - Port-aware workflow rendered to '{output_path}'")
def flatten_xdl_procedure(procedure_elem: ET.Element) -> List[ET.Element]:
"""展平嵌套的XDL程序结构"""
flattened_operations = []
TEMP_UNSUPPORTED_PROTOCOL = ["Purge", "Wait", "Stir", "ResetHandling"]
def extract_operations(element: ET.Element):
if element.tag not in ["Prep", "Reaction", "Workup", "Purification", "Procedure"]:
if element.tag not in TEMP_UNSUPPORTED_PROTOCOL:
flattened_operations.append(element)
for child in element:
extract_operations(child)
for child in procedure_elem:
extract_operations(child)
return flattened_operations
def parse_xdl_content(xdl_content: str) -> tuple:
"""解析XDL内容"""
try:
xdl_content_cleaned = "".join(c for c in xdl_content if c.isprintable())
root = ET.fromstring(xdl_content_cleaned)
synthesis_elem = root.find("Synthesis")
if synthesis_elem is None:
return None, None, None
# 解析硬件组件
hardware_elem = synthesis_elem.find("Hardware")
hardware = []
if hardware_elem is not None:
hardware = [{"id": c.get("id"), "type": c.get("type")} for c in hardware_elem.findall("Component")]
# 解析试剂
reagents_elem = synthesis_elem.find("Reagents")
reagents = []
if reagents_elem is not None:
reagents = [{"name": r.get("name"), "role": r.get("role", "")} for r in reagents_elem.findall("Reagent")]
# 解析程序
procedure_elem = synthesis_elem.find("Procedure")
if procedure_elem is None:
return None, None, None
flattened_operations = flatten_xdl_procedure(procedure_elem)
return hardware, reagents, flattened_operations
except ET.ParseError as e:
raise ValueError(f"Invalid XDL format: {e}")
def convert_xdl_to_dict(xdl_content: str) -> Dict[str, Any]:
"""
将XDL XML格式转换为标准的字典格式
Args:
xdl_content: XDL XML内容
Returns:
转换结果,包含步骤和器材信息
"""
try:
hardware, reagents, flattened_operations = parse_xdl_content(xdl_content)
if hardware is None:
return {"error": "Failed to parse XDL content", "success": False}
# 将XDL元素转换为字典格式
steps_data = []
for elem in flattened_operations:
# 转换参数类型
parameters = {}
for key, val in elem.attrib.items():
converted_val = convert_to_type(val)
if converted_val is not None:
parameters[key] = converted_val
step_dict = {
"operation": elem.tag,
"parameters": parameters,
"description": elem.get("purpose", f"Operation: {elem.tag}"),
}
steps_data.append(step_dict)
# 合并硬件和试剂为统一的labware_info格式
labware_data = []
labware_data.extend({"id": hw["id"], "type": "hardware", **hw} for hw in hardware)
labware_data.extend({"name": reagent["name"], "type": "reagent", **reagent} for reagent in reagents)
return {
"success": True,
"steps": steps_data,
"labware": labware_data,
"message": f"Successfully converted XDL to dict format. Found {len(steps_data)} steps and {len(labware_data)} labware items.",
}
except Exception as e:
error_msg = f"XDL conversion failed: {str(e)}"
logger.error(error_msg)
return {"error": error_msg, "success": False}
def create_workflow(
steps_info: str,
labware_info: str,
workflow_name: str = "Generated Workflow",
workstation_name: str = "workstation",
workflow_description: str = "Auto-generated workflow from protocol",
) -> Dict[str, Any]:
"""
创建工作流,输入数据已经是统一的字典格式
Args:
steps_info: 步骤信息 (JSON字符串已经是list of dict格式)
labware_info: 实验器材和试剂信息 (JSON字符串已经是list of dict格式)
workflow_name: 工作流名称
workflow_description: 工作流描述
Returns:
创建结果包含工作流UUID和详细信息
"""
try:
# 直接解析JSON数据
steps_info_clean = extract_json_from_markdown(steps_info)
labware_info_clean = extract_json_from_markdown(labware_info)
steps_data = json.loads(steps_info_clean)
labware_data = json.loads(labware_info_clean)
# 统一处理所有数据
protocol_graph = build_protocol_graph(labware_data, steps_data, workstation_name=workstation_name)
# 检测协议类型(用于标签)
protocol_type = "bio" if any("biomek" in step.get("template", "") for step in refactored_steps) else "organic"
# 转换为工作流格式
data = protocol_graph.to_dict()
# 转换节点格式
for i, node in enumerate(data["nodes"]):
description = node.get("description", "")
onode = {
"template": node.pop("template"),
"id": node["id"],
"lab_node_type": node.get("lab_node_type", "Device"),
"name": description or f"Node {i + 1}",
"params": {"default": node},
"handles": {},
}
# 处理边连接
for edge in data["links"]:
if edge["source"] == node["id"]:
source_port = edge.get("source_port", "output")
if source_port not in onode["handles"]:
onode["handles"][source_port] = {"type": "source"}
if edge["target"] == node["id"]:
target_port = edge.get("target_port", "input")
if target_port not in onode["handles"]:
onode["handles"][target_port] = {"type": "target"}
data["nodes"][i] = onode
# 发送到API创建工作流
api_secret = configs.Lab.Key
if not api_secret:
return {"error": "API SecretKey is not configured", "success": False}
# Step 1: 创建工作流
workflow_url = f"{configs.Lab.Api}/api/v1/workflow/"
headers = {
"Content-Type": "application/json",
}
params = {"secret_key": api_secret}
graph_data = {"name": workflow_name, **data}
logger.info(f"Creating workflow: {workflow_name}")
response = requests.post(
workflow_url, params=params, json=graph_data, headers=headers, timeout=configs.Lab.Timeout
)
response.raise_for_status()
workflow_info = response.json()
if workflow_info.get("code") != 0:
error_msg = f"API returned an error: {workflow_info.get('msg', 'Unknown Error')}"
logger.error(error_msg)
return {"error": error_msg, "success": False}
workflow_uuid = workflow_info.get("data", {}).get("uuid")
if not workflow_uuid:
return {"error": "Failed to get workflow UUID from response", "success": False}
# Step 2: 添加到模板库(可选)
try:
library_url = f"{configs.Lab.Api}/api/flociety/vs/workflows/library/"
lib_payload = {
"workflow_uuid": workflow_uuid,
"title": workflow_name,
"description": workflow_description,
"labels": [protocol_type.title(), "Auto-generated"],
}
library_response = requests.post(
library_url, params=params, json=lib_payload, headers=headers, timeout=configs.Lab.Timeout
)
library_response.raise_for_status()
library_info = library_response.json()
logger.info(f"Workflow added to library: {library_info}")
return {
"success": True,
"workflow_uuid": workflow_uuid,
"workflow_info": workflow_info.get("data"),
"library_info": library_info.get("data"),
"protocol_type": protocol_type,
"message": f"Workflow '{workflow_name}' created successfully",
}
except Exception as e:
# 即使添加到库失败,工作流创建仍然成功
logger.warning(f"Failed to add workflow to library: {str(e)}")
return {
"success": True,
"workflow_uuid": workflow_uuid,
"workflow_info": workflow_info.get("data"),
"protocol_type": protocol_type,
"message": f"Workflow '{workflow_name}' created successfully (library addition failed)",
}
except requests.exceptions.RequestException as e:
error_msg = f"Network error when calling API: {str(e)}"
logger.error(error_msg)
return {"error": error_msg, "success": False}
except json.JSONDecodeError as e:
error_msg = f"JSON parsing error: {str(e)}"
logger.error(error_msg)
return {"error": error_msg, "success": False}
except Exception as e:
error_msg = f"An unexpected error occurred: {str(e)}"
logger.error(error_msg)
logger.error(traceback.format_exc())
return {"error": error_msg, "success": False}

View File

@@ -170,15 +170,16 @@
"z": 0
},
"config": {
"max_volume": 1000.0
"max_volume": 1000.0,
"type": "RegularContainer",
"category": "container",
"size_x": 200,
"size_y": 150,
"size_z": 0
},
"data": {
"liquids": [
{
"liquid_type": "DMF",
"liquid_volume": 1000.0
}
]
"liquids": [["DMF", 500.0]],
"pending_liquids": [["DMF", 500.0]]
}
},
{
@@ -194,15 +195,16 @@
"z": 0
},
"config": {
"max_volume": 1000.0
"max_volume": 1000.0,
"type": "RegularContainer",
"category": "container",
"size_x": 200,
"size_y": 150,
"size_z": 0
},
"data": {
"liquids": [
{
"liquid_type": "ethyl_acetate",
"liquid_volume": 1000.0
}
]
"liquids": [["ethyl_acetate", 1000.0]],
"pending_liquids": [["ethyl_acetate", 1000.0]]
}
},
{
@@ -218,15 +220,16 @@
"z": 0
},
"config": {
"max_volume": 1000.0
"max_volume": 1000.0,
"type": "RegularContainer",
"category": "container",
"size_x": 300,
"size_y": 150,
"size_z": 0
},
"data": {
"liquids": [
{
"liquid_type": "hexane",
"liquid_volume": 1000.0
}
]
"liquids": [["hexane", 1000.0]],
"pending_liquids": [["hexane", 1000.0]]
}
},
{
@@ -242,15 +245,16 @@
"z": 0
},
"config": {
"max_volume": 1000.0
"max_volume": 1000.0,
"type": "RegularContainer",
"category": "container",
"size_x": 900,
"size_y": 150,
"size_z": 0
},
"data": {
"liquids": [
{
"liquid_type": "methanol",
"liquid_volume": 1000.0
}
]
"liquids": [["methanol", 1000.0]],
"pending_liquids": [["methanol", 1000.0]]
}
},
{
@@ -266,15 +270,16 @@
"z": 0
},
"config": {
"max_volume": 1000.0
"max_volume": 1000.0,
"type": "RegularContainer",
"category": "container",
"size_x": 950,
"size_y": 150,
"size_z": 0
},
"data": {
"liquids": [
{
"liquid_type": "water",
"liquid_volume": 1000.0
}
]
"liquids": [["water", 1000.0]],
"pending_liquids": [["water", 1000.0]]
}
},
{
@@ -335,14 +340,16 @@
},
"config": {
"max_volume": 500.0,
"type": "RegularContainer",
"category": "container",
"max_temp": 200.0,
"min_temp": -20.0,
"has_stirrer": true,
"has_heater": true
},
"data": {
"liquids": [
]
"liquids": [],
"pending_liquids": []
}
},
{
@@ -419,11 +426,16 @@
"z": 0
},
"config": {
"max_volume": 2000.0
"max_volume": 2000.0,
"type": "RegularContainer",
"category": "container",
"size_x": 500,
"size_y": 400,
"size_z": 0
},
"data": {
"liquids": [
]
"liquids": [],
"pending_liquids": []
}
},
{
@@ -439,11 +451,16 @@
"z": 0
},
"config": {
"max_volume": 2000.0
"max_volume": 2000.0,
"type": "RegularContainer",
"category": "container",
"size_x": 1100,
"size_y": 500,
"size_z": 0
},
"data": {
"liquids": [
]
"liquids": [],
"pending_liquids": []
}
},
{
@@ -649,11 +666,16 @@
"z": 0
},
"config": {
"max_volume": 250.0
"max_volume": 250.0,
"type": "RegularContainer",
"category": "container",
"size_x": 900,
"size_y": 500,
"size_z": 0
},
"data": {
"liquids": [
]
"liquids": [],
"pending_liquids": []
}
},
{
@@ -669,11 +691,16 @@
"z": 0
},
"config": {
"max_volume": 250.0
"max_volume": 250.0,
"type": "RegularContainer",
"category": "container",
"size_x": 950,
"size_y": 500,
"size_z": 0
},
"data": {
"liquids": [
]
"liquids": [],
"pending_liquids": []
}
},
{
@@ -689,11 +716,16 @@
"z": 0
},
"config": {
"max_volume": 250.0
"max_volume": 250.0,
"type": "RegularContainer",
"category": "container",
"size_x": 1050,
"size_y": 500,
"size_z": 0
},
"data": {
"liquids": [
]
"liquids": [],
"pending_liquids": []
}
},
{
@@ -733,6 +765,11 @@
},
"config": {
"max_volume": 500.0,
"size_x": 550,
"size_y": 250,
"size_z": 0,
"type": "RegularContainer",
"category": "container",
"reagent": "sodium_chloride",
"physical_state": "solid"
},
@@ -756,6 +793,11 @@
},
"config": {
"volume": 500.0,
"size_x": 600,
"size_y": 250,
"size_z": 0,
"type": "RegularContainer",
"category": "container",
"reagent": "sodium_carbonate",
"physical_state": "solid"
},
@@ -779,6 +821,11 @@
},
"config": {
"volume": 500.0,
"size_x": 650,
"size_y": 250,
"size_z": 0,
"type": "RegularContainer",
"category": "container",
"reagent": "magnesium_chloride",
"physical_state": "solid"
},

View File

@@ -8,7 +8,7 @@
],
"parent": null,
"type": "device",
"class": "dispensing_station.bioyond",
"class": "bioyond_dispensing_station",
"config": {
"config": {
"api_key": "DE9BDDA0",
@@ -20,13 +20,6 @@
"_resource_type": "unilabos.resources.bioyond.decks:BIOYOND_PolymerPreparationStation_Deck"
}
},
"station_config": {
"station_type": "dispensing_station",
"enable_dispensing_station": true,
"enable_reaction_station": false,
"station_name": "DispensingStation_001",
"description": "Bioyond配液工作站"
},
"protocol_type": []
},
"data": {}
@@ -57,4 +50,4 @@
"data": {}
}
]
}
}

View File

@@ -10,7 +10,7 @@
"type": "device",
"class": "reaction_station.bioyond",
"config": {
"bioyond_config": {
"config": {
"api_key": "DE9BDDA0",
"api_host": "http://192.168.1.200:44402",
"workflow_mappings": {
@@ -19,14 +19,18 @@
"Solid_feeding_vials": "3a160877-87e7-7699-7bc6-ec72b05eb5e6",
"Liquid_feeding_vials(non-titration)": "3a167d99-6158-c6f0-15b5-eb030f7d8e47",
"Liquid_feeding_solvents": "3a160824-0665-01ed-285a-51ef817a9046",
"Liquid_feeding(titration)": "3a160824-0665-01ed-285a-51ef817a9046",
"Liquid_feeding_beaker": "3a16087e-124f-8ddb-8ec1-c2dff09ca784",
"Liquid_feeding(titration)": "3a16082a-96ac-0449-446a-4ed39f3365b6",
"liquid_feeding_beaker": "3a16087e-124f-8ddb-8ec1-c2dff09ca784",
"Drip_back": "3a162cf9-6aac-565a-ddd7-682ba1796a4a"
},
"material_type_mappings": {
"烧杯": "BIOYOND_PolymerStation_1FlaskCarrier",
"试剂瓶": "BIOYOND_PolymerStation_1BottleCarrier",
"样品板": "BIOYOND_PolymerStation_6VialCarrier"
"烧杯": ["YB_1FlaskCarrier", "3a14196b-24f2-ca49-9081-0cab8021bf1a"],
"试剂瓶": ["YB_1BottleCarrier", ""],
"样品板": ["YB_6StockCarrier", "3a14196e-b7a0-a5da-1931-35f3000281e9"],
"分装板": ["YB_6VialCarrier", "3a14196e-5dfe-6e21-0c79-fe2036d052c4"],
"样品瓶": ["YB_Solid_Stock", "3a14196a-cf7d-8aea-48d8-b9662c7dba94"],
"90%分装小瓶": ["YB_Solid_Vial", "3a14196c-cdcf-088d-dc7d-5cf38f0ad9ea"],
"10%分装小瓶": ["YB_Liquid_Vial", "3a14196c-76be-2279-4e22-7310d69aed68"]
}
},
"deck": {
@@ -42,7 +46,6 @@
{
"id": "Bioyond_Deck",
"name": "Bioyond_Deck",
"sample_id": null,
"children": [
],
"parent": "reaction_station_bioyond",

View File

@@ -24,9 +24,9 @@
"Drip_back": "3a162cf9-6aac-565a-ddd7-682ba1796a4a"
},
"material_type_mappings": {
"烧杯": "BIOYOND_PolymerStation_1FlaskCarrier",
"试剂瓶": "BIOYOND_PolymerStation_1BottleCarrier",
"样品板": "BIOYOND_PolymerStation_6VialCarrier"
"烧杯": "YB_1FlaskCarrier",
"试剂瓶": "YB_1BottleCarrier",
"样品板": "YB_6VialCarrier"
}
},
"deck": {

View File

@@ -0,0 +1,52 @@
[
{
"id": "3a1d377b-299d-d0f2-ced9-48257f60dfad",
"typeName": "加样头(大)",
"code": "0005-00145",
"barCode": "",
"name": "LiDFOB",
"quantity": 9999.0,
"lockQuantity": 0.0,
"unit": "个",
"status": 1,
"isUse": false,
"locations": [
{
"id": "3a19da56-1379-ff7c-1745-07e200b44ce2",
"whid": "3a19da56-1378-613b-29f2-871e1a287aa5",
"whName": "粉末加样头堆栈",
"code": "0005-0001",
"x": 1,
"y": 1,
"z": 1,
"quantity": 0
}
],
"detail": []
},
{
"id": "3a1d377b-6a81-6a7e-147c-f89f6463656d",
"typeName": "液",
"code": "0006-00141",
"barCode": "",
"name": "EMC",
"quantity": 99999.0,
"lockQuantity": 0.0,
"unit": "g",
"status": 1,
"isUse": false,
"locations": [
{
"id": "3a1baa20-a7b1-c665-8b9c-d8099d07d2f6",
"whid": "3a1baa20-a7b0-5c19-8844-5de8924d4e78",
"whName": "4号手套箱内部堆栈",
"code": "0015-0001",
"x": 1,
"y": 1,
"z": 1,
"quantity": 0
}
],
"detail": []
}
]

View File

@@ -0,0 +1,99 @@
{
"typeId": "3a190c8b-3284-af78-d29f-9a69463ad047",
"code": "",
"barCode": "",
"name": "test",
"unit": "",
"parameters": "{}",
"quantity": "",
"details": [
{
"typeId": "3a190c8c-fe8f-bf48-0dc3-97afc7f508eb",
"code": "",
"name": "配液瓶(小)11",
"quantity": "1",
"x": 1,
"y": 1,
"z": 1,
"unit": "",
"parameters": "{}"
},
{
"typeId": "3a190c8c-fe8f-bf48-0dc3-97afc7f508eb",
"code": "",
"name": "配液瓶(小)21",
"quantity": "1",
"x": 2,
"y": 1,
"z": 1,
"unit": "",
"parameters": "{}"
},
{
"typeId": "3a190c8c-fe8f-bf48-0dc3-97afc7f508eb",
"code": "",
"name": "配液瓶(小)12",
"quantity": "1",
"x": 1,
"y": 2,
"z": 1,
"unit": "",
"parameters": "{}"
},
{
"typeId": "3a190c8c-fe8f-bf48-0dc3-97afc7f508eb",
"code": "",
"name": "配液瓶(小)22",
"quantity": "1",
"x": 2,
"y": 2,
"z": 1,
"unit": "",
"parameters": "{}"
},
{
"typeId": "3a190c8c-fe8f-bf48-0dc3-97afc7f508eb",
"code": "",
"name": "配液瓶(小)13",
"quantity": "1",
"x": 1,
"y": 3,
"z": 1,
"unit": "",
"parameters": "{}"
},
{
"typeId": "3a190c8c-fe8f-bf48-0dc3-97afc7f508eb",
"code": "",
"name": "配液瓶(小)23",
"quantity": "1",
"x": 2,
"y": 3,
"z": 1,
"unit": "",
"parameters": "{}"
},
{
"typeId": "3a190c8c-fe8f-bf48-0dc3-97afc7f508eb",
"code": "",
"name": "配液瓶(小)14",
"quantity": "1",
"x": 1,
"y": 4,
"z": 1,
"unit": "",
"parameters": "{}"
},
{
"typeId": "3a190c8c-fe8f-bf48-0dc3-97afc7f508eb",
"code": "",
"name": "配液瓶(小)24",
"quantity": "1",
"x": 2,
"y": 4,
"z": 1,
"unit": "",
"parameters": "{}"
}
]
}

148
test/resources/test.json Normal file
View File

@@ -0,0 +1,148 @@
[
{
"id": "3a1d4c14-a9fb-d7dc-9e96-7a3ad6e50219",
"typeName": "配液瓶(小)板",
"code": "0001-00093",
"barCode": "",
"name": "test",
"quantity": 2.0,
"lockQuantity": 0.0,
"unit": "块",
"status": 1,
"isUse": false,
"locations": [
{
"id": "3a19deae-2c7a-36f5-5e41-02c5b66feaea",
"whid": "3a19deae-2c79-05a3-9c76-8e6760424841",
"whName": "手动堆栈",
"code": "1",
"x": 1,
"y": 1,
"z": 1,
"quantity": 0
}
],
"detail": [
{
"id": "3a1d4c14-a9fc-1daa-71fa-146cb1ccb930",
"detailMaterialId": "3a1d4c14-a9fc-4f38-4c48-68486c391c42",
"code": "0001-00093 - 05",
"name": "配液瓶(小)",
"quantity": "1",
"lockQuantity": "0",
"unit": "个",
"x": 1,
"y": 3,
"z": 1,
"associateId": null,
"typeName": "配液瓶(小)",
"typeId": "3a190c8c-fe8f-bf48-0dc3-97afc7f508eb"
},
{
"id": "3a1d4c14-a9fc-3659-ea61-cd587da9e131",
"detailMaterialId": "3a1d4c14-a9fc-018f-93e5-c49343d37758",
"code": "0001-00093 - 08",
"name": "配液瓶(小)",
"quantity": "1",
"lockQuantity": "0",
"unit": "个",
"x": 2,
"y": 4,
"z": 1,
"associateId": null,
"typeName": "配液瓶(小)",
"typeId": "3a190c8c-fe8f-bf48-0dc3-97afc7f508eb"
},
{
"id": "3a1d4c14-a9fc-3f94-de83-979d2646e313",
"detailMaterialId": "3a1d4c14-a9fc-9987-c0ef-4b7cbad49e6b",
"code": "0001-00093 - 01",
"name": "配液瓶(小)",
"quantity": "1",
"lockQuantity": "0",
"unit": "个",
"x": 1,
"y": 1,
"z": 1,
"associateId": null,
"typeName": "配液瓶(小)",
"typeId": "3a190c8c-fe8f-bf48-0dc3-97afc7f508eb"
},
{
"id": "3a1d4c14-a9fc-8c35-6b25-913b11dbaf4e",
"detailMaterialId": "3a1d4c14-a9fc-9a83-865b-0c26ea5e8cc4",
"code": "0001-00093 - 03",
"name": "配液瓶(小)",
"quantity": "1",
"lockQuantity": "0",
"unit": "个",
"x": 1,
"y": 2,
"z": 1,
"associateId": null,
"typeName": "配液瓶(小)",
"typeId": "3a190c8c-fe8f-bf48-0dc3-97afc7f508eb"
},
{
"id": "3a1d4c14-a9fc-b41f-e968-64953bfddccd",
"detailMaterialId": "3a1d4c14-a9fc-daf7-9d64-e5ec8d3ae0e2",
"code": "0001-00093 - 07",
"name": "配液瓶(小)",
"quantity": "1",
"lockQuantity": "0",
"unit": "个",
"x": 1,
"y": 4,
"z": 1,
"associateId": null,
"typeName": "配液瓶(小)",
"typeId": "3a190c8c-fe8f-bf48-0dc3-97afc7f508eb"
},
{
"id": "3a1d4c14-a9fc-c20f-c26e-b1bb2cdc3bca",
"detailMaterialId": "3a1d4c14-a9fc-673b-ac83-aaaf71287f1f",
"code": "0001-00093 - 06",
"name": "配液瓶(小)",
"quantity": "1",
"lockQuantity": "0",
"unit": "个",
"x": 2,
"y": 3,
"z": 1,
"associateId": null,
"typeName": "配液瓶(小)",
"typeId": "3a190c8c-fe8f-bf48-0dc3-97afc7f508eb"
},
{
"id": "3a1d4c14-a9fc-cf21-059c-fde361d82b6f",
"detailMaterialId": "3a1d4c14-a9fc-25b1-e736-6b0d8dac0fae",
"code": "0001-00093 - 02",
"name": "配液瓶(小)",
"quantity": "1",
"lockQuantity": "0",
"unit": "个",
"x": 2,
"y": 1,
"z": 1,
"associateId": null,
"typeName": "配液瓶(小)",
"typeId": "3a190c8c-fe8f-bf48-0dc3-97afc7f508eb"
},
{
"id": "3a1d4c14-a9fc-d732-2b93-9b2bd2bf581b",
"detailMaterialId": "3a1d4c14-a9fc-7f5d-b6b6-8bcb2e15f320",
"code": "0001-00093 - 04",
"name": "配液瓶(小)",
"quantity": "1",
"lockQuantity": "0",
"unit": "个",
"x": 2,
"y": 2,
"z": 1,
"associateId": null,
"typeName": "配液瓶(小)",
"typeId": "3a190c8c-fe8f-bf48-0dc3-97afc7f508eb"
}
]
}
]

View File

@@ -1,7 +1,7 @@
import pytest
from unilabos.resources.bioyond.bottle_carriers import BIOYOND_Electrolyte_6VialCarrier, BIOYOND_Electrolyte_1BottleCarrier
from unilabos.resources.bioyond.bottles import BIOYOND_PolymerStation_Solid_Vial, BIOYOND_PolymerStation_Solution_Beaker, BIOYOND_PolymerStation_Reagent_Bottle
from unilabos.resources.bioyond.bottles import YB_Solid_Vial, YB_Solution_Beaker, YB_Reagent_Bottle
def test_bottle_carrier() -> "BottleCarrier":
@@ -16,9 +16,9 @@ def test_bottle_carrier() -> "BottleCarrier":
print(f"1烧杯载架: {beaker_carrier.name}, 位置数: {len(beaker_carrier.sites)}")
# 创建瓶子和烧杯
powder_bottle = BIOYOND_PolymerStation_Solid_Vial("powder_bottle_01")
solution_beaker = BIOYOND_PolymerStation_Solution_Beaker("solution_beaker_01")
reagent_bottle = BIOYOND_PolymerStation_Reagent_Bottle("reagent_bottle_01")
powder_bottle = YB_Solid_Vial("powder_bottle_01")
solution_beaker = YB_Solution_Beaker("solution_beaker_01")
reagent_bottle = YB_Reagent_Bottle("reagent_bottle_01")
print(f"\n创建的物料:")
print(f"粉末瓶: {powder_bottle.name} - {powder_bottle.diameter}mm x {powder_bottle.height}mm, {powder_bottle.max_volume}μL")

View File

@@ -12,23 +12,13 @@ lab_registry.setup()
type_mapping = {
"烧杯": "BIOYOND_PolymerStation_1FlaskCarrier",
"试剂瓶": "BIOYOND_PolymerStation_1BottleCarrier",
"样品板": "BIOYOND_PolymerStation_6StockCarrier",
"分装板": "BIOYOND_PolymerStation_6VialCarrier",
"样品瓶": "BIOYOND_PolymerStation_Solid_Stock",
"90%分装小瓶": "BIOYOND_PolymerStation_Solid_Vial",
"10%分装小瓶": "BIOYOND_PolymerStation_Liquid_Vial",
}
type_uuid_mapping = {
"烧杯": "",
"试剂瓶": "",
"样品板": "",
"分装板": "3a14196e-5dfe-6e21-0c79-fe2036d052c4",
"样品瓶": "3a14196a-cf7d-8aea-48d8-b9662c7dba94",
"90%分装小瓶": "3a14196c-cdcf-088d-dc7d-5cf38f0ad9ea",
"10%分装小瓶": "3a14196c-76be-2279-4e22-7310d69aed68",
"烧杯": ("YB_1FlaskCarrier", "3a14196b-24f2-ca49-9081-0cab8021bf1a"),
"试剂瓶": ("YB_1BottleCarrier", ""),
"样品板": ("YB_6StockCarrier", "3a14196e-b7a0-a5da-1931-35f3000281e9"),
"分装板": ("YB_6VialCarrier", "3a14196e-5dfe-6e21-0c79-fe2036d052c4"),
"样品瓶": ("YB_Solid_Stock", "3a14196a-cf7d-8aea-48d8-b9662c7dba94"),
"90%分装小瓶": ("YB_Solid_Vial", "3a14196c-cdcf-088d-dc7d-5cf38f0ad9ea"),
"10%分装小瓶": ("YB_Liquid_Vial", "3a14196c-76be-2279-4e22-7310d69aed68"),
}

View File

@@ -0,0 +1,115 @@
#!/usr/bin/env python3
"""
测试修改后的 get_child_identifier 函数
"""
from unilabos.resources.itemized_carrier import ItemizedCarrier, Bottle
from pylabrobot.resources.coordinate import Coordinate
def test_get_child_identifier_with_indices():
"""测试返回x,y,z索引的 get_child_identifier 函数"""
# 创建一些测试瓶子
bottle1 = Bottle("bottle1", diameter=25.0, height=50.0, max_volume=15.0)
bottle1.location = Coordinate(10, 20, 5)
bottle2 = Bottle("bottle2", diameter=25.0, height=50.0, max_volume=15.0)
bottle2.location = Coordinate(50, 20, 5)
bottle3 = Bottle("bottle3", diameter=25.0, height=50.0, max_volume=15.0)
bottle3.location = Coordinate(90, 20, 5)
# 创建载架,指定维度
sites = {
"A1": bottle1,
"A2": bottle2,
"A3": bottle3,
"B1": None, # 空位
"B2": None,
"B3": None
}
carrier = ItemizedCarrier(
name="test_carrier",
size_x=150,
size_y=100,
size_z=30,
num_items_x=3, # 3列
num_items_y=2, # 2行
num_items_z=1, # 1层
sites=sites
)
print("测试载架维度:")
print(f"num_items_x: {carrier.num_items_x}")
print(f"num_items_y: {carrier.num_items_y}")
print(f"num_items_z: {carrier.num_items_z}")
print()
# 测试获取bottle1的标识符信息 (A1 = idx:0, x:0, y:0, z:0)
result1 = carrier.get_child_identifier(bottle1)
print("测试bottle1 (A1):")
print(f" identifier: {result1['identifier']}")
print(f" idx: {result1['idx']}")
print(f" x index: {result1['x']}")
print(f" y index: {result1['y']}")
print(f" z index: {result1['z']}")
# Assert 验证 bottle1 (A1) 的结果
assert result1['identifier'] == 'A1', f"Expected identifier 'A1', got '{result1['identifier']}'"
assert result1['idx'] == 0, f"Expected idx 0, got {result1['idx']}"
assert result1['x'] == 0, f"Expected x index 0, got {result1['x']}"
assert result1['y'] == 0, f"Expected y index 0, got {result1['y']}"
assert result1['z'] == 0, f"Expected z index 0, got {result1['z']}"
print(" ✓ bottle1 (A1) 测试通过")
print()
# 测试获取bottle2的标识符信息 (A2 = idx:1, x:1, y:0, z:0)
result2 = carrier.get_child_identifier(bottle2)
print("测试bottle2 (A2):")
print(f" identifier: {result2['identifier']}")
print(f" idx: {result2['idx']}")
print(f" x index: {result2['x']}")
print(f" y index: {result2['y']}")
print(f" z index: {result2['z']}")
# Assert 验证 bottle2 (A2) 的结果
assert result2['identifier'] == 'A2', f"Expected identifier 'A2', got '{result2['identifier']}'"
assert result2['idx'] == 1, f"Expected idx 1, got {result2['idx']}"
assert result2['x'] == 1, f"Expected x index 1, got {result2['x']}"
assert result2['y'] == 0, f"Expected y index 0, got {result2['y']}"
assert result2['z'] == 0, f"Expected z index 0, got {result2['z']}"
print(" ✓ bottle2 (A2) 测试通过")
print()
# 测试获取bottle3的标识符信息 (A3 = idx:2, x:2, y:0, z:0)
result3 = carrier.get_child_identifier(bottle3)
print("测试bottle3 (A3):")
print(f" identifier: {result3['identifier']}")
print(f" idx: {result3['idx']}")
print(f" x index: {result3['x']}")
print(f" y index: {result3['y']}")
print(f" z index: {result3['z']}")
# Assert 验证 bottle3 (A3) 的结果
assert result3['identifier'] == 'A3', f"Expected identifier 'A3', got '{result3['identifier']}'"
assert result3['idx'] == 2, f"Expected idx 2, got {result3['idx']}"
assert result3['x'] == 2, f"Expected x index 2, got {result3['x']}"
assert result3['y'] == 0, f"Expected y index 0, got {result3['y']}"
assert result3['z'] == 0, f"Expected z index 0, got {result3['z']}"
print(" ✓ bottle3 (A3) 测试通过")
print()
# 测试错误情况:查找不存在的资源
bottle_not_exists = Bottle("bottle_not_exists", diameter=25.0, height=50.0, max_volume=15.0)
try:
carrier.get_child_identifier(bottle_not_exists)
assert False, "应该抛出 ValueError 异常"
except ValueError as e:
print("✓ 正确抛出了 ValueError 异常:", str(e))
assert "is not assigned to this carrier" in str(e), "异常消息应该包含预期的文本"
print("\n🎉 所有测试都通过了!")
if __name__ == "__main__":
test_get_child_identifier_with_indices()

View File

@@ -0,0 +1,75 @@
from ast import If
import pytest
import json
import os
from pylabrobot.resources import Resource as ResourcePLR
from unilabos.resources.graphio import resource_bioyond_to_plr
from unilabos.ros.nodes.resource_tracker import ResourceTreeSet
from unilabos.registry.registry import lab_registry
from unilabos.resources.bioyond.decks import BIOYOND_PolymerReactionStation_Deck
from unilabos.resources.bioyond.decks import YB_Deck
lab_registry.setup()
type_mapping = {
"加样头(大)": ("YB_jia_yang_tou_da_1X1_carrier", "3a190ca0-b2f6-9aeb-8067-547e72c11469"),
"": ("YB_1BottleCarrier", "3a190ca1-2add-2b23-f8e1-bbd348b7f790"),
"配液瓶(小)板": ("YB_6x_SmallSolutionBottleCarrier", "3a190c8b-3284-af78-d29f-9a69463ad047"),
"配液瓶(小)": ("YB_pei_ye_xiao_Bottler", "3a190c8c-fe8f-bf48-0dc3-97afc7f508eb"),
}
@pytest.fixture
def bioyond_materials_reaction() -> list[dict]:
print("加载 BioYond 物料数据...")
print(os.getcwd())
with open("bioyond_materials_reaction.json", "r", encoding="utf-8") as f:
data = json.load(f)
print(f"加载了 {len(data)} 条物料数据")
return data
@pytest.fixture
def bioyond_materials_liquidhandling_1() -> list[dict]:
print("加载 BioYond 物料数据...")
print(os.getcwd())
with open("bioyond_materials_liquidhandling_1.json", "r", encoding="utf-8") as f:
data = json.load(f)
print(f"加载了 {len(data)} 条物料数据")
return data
@pytest.fixture
def bioyond_materials_liquidhandling_2() -> list[dict]:
print("加载 BioYond 物料数据...")
print(os.getcwd())
with open("bioyond_materials_liquidhandling_2.json", "r", encoding="utf-8") as f:
data = json.load(f)
print(f"加载了 {len(data)} 条物料数据")
return data
@pytest.mark.parametrize("materials_fixture", [
"bioyond_materials_reaction",
"bioyond_materials_liquidhandling_1",
])
def test_resourcetreeset_from_plr() -> list[dict]:
# 直接加载 bioyond_materials_reaction.json 文件
current_dir = os.path.dirname(os.path.abspath(__file__))
json_path = os.path.join(current_dir, "test.json")
with open(json_path, "r", encoding="utf-8") as f:
materials = json.load(f)
deck = YB_Deck("test_deck")
output = resource_bioyond_to_plr(materials, type_mapping=type_mapping, deck=deck)
print(output)
# print(deck.summary())
r = ResourceTreeSet.from_plr_resources([deck])
print(r.dump())
# json.dump(deck.serialize(), open("test.json", "w", encoding="utf-8"), indent=4)
if __name__ == "__main__":
test_resourcetreeset_from_plr()

View File

@@ -0,0 +1,186 @@
{
"workflow": [
{
"action": "transfer_liquid",
"action_args": {
"sources": "Liquid_1",
"targets": "Liquid_2",
"asp_vol": 66.0,
"dis_vol": 66.0,
"asp_flow_rate": 94.0,
"dis_flow_rate": 94.0
}
},
{
"action": "transfer_liquid",
"action_args": {
"sources": "Liquid_2",
"targets": "Liquid_3",
"asp_vol": 58.0,
"dis_vol": 96.0,
"asp_flow_rate": 94.0,
"dis_flow_rate": 94.0
}
},
{
"action": "transfer_liquid",
"action_args": {
"sources": "Liquid_4",
"targets": "Liquid_2",
"asp_vol": 85.0,
"dis_vol": 170.0,
"asp_flow_rate": 94.0,
"dis_flow_rate": 94.0
}
},
{
"action": "transfer_liquid",
"action_args": {
"sources": "Liquid_4",
"targets": "Liquid_2",
"asp_vol": 63.333333333333336,
"dis_vol": 170.0,
"asp_flow_rate": 94.0,
"dis_flow_rate": 94.0
}
},
{
"action": "transfer_liquid",
"action_args": {
"sources": "Liquid_2",
"targets": "Liquid_3",
"asp_vol": 72.0,
"dis_vol": 150.0,
"asp_flow_rate": 94.0,
"dis_flow_rate": 94.0
}
},
{
"action": "transfer_liquid",
"action_args": {
"sources": "Liquid_4",
"targets": "Liquid_2",
"asp_vol": 85.0,
"dis_vol": 170.0,
"asp_flow_rate": 94.0,
"dis_flow_rate": 94.0
}
},
{
"action": "transfer_liquid",
"action_args": {
"sources": "Liquid_4",
"targets": "Liquid_2",
"asp_vol": 63.333333333333336,
"dis_vol": 170.0,
"asp_flow_rate": 94.0,
"dis_flow_rate": 94.0
}
},
{
"action": "transfer_liquid",
"action_args": {
"sources": "Liquid_2",
"targets": "Liquid_3",
"asp_vol": 72.0,
"dis_vol": 150.0,
"asp_flow_rate": 94.0,
"dis_flow_rate": 94.0
}
},
{
"action": "transfer_liquid",
"action_args": {
"sources": "Liquid_2",
"targets": "Liquid_3",
"asp_vol": 20.0,
"dis_vol": 20.0,
"asp_flow_rate": 7.6,
"dis_flow_rate": 7.6
}
},
{
"action": "transfer_liquid",
"action_args": {
"sources": "Liquid_5",
"targets": "Liquid_2",
"asp_vol": 6.0,
"dis_vol": 12.0,
"asp_flow_rate": 7.6,
"dis_flow_rate": 7.6
}
},
{
"action": "transfer_liquid",
"action_args": {
"sources": "Liquid_5",
"targets": "Liquid_2",
"asp_vol": 10.666666666666666,
"dis_vol": 12.0,
"asp_flow_rate": 7.599999999999999,
"dis_flow_rate": 7.6
}
},
{
"action": "transfer_liquid",
"action_args": {
"sources": "Liquid_2",
"targets": "Liquid_6",
"asp_vol": 12.0,
"dis_vol": 10.0,
"asp_flow_rate": 7.6,
"dis_flow_rate": 7.6
}
}
],
"reagent": {
"Liquid_6": {
"slot": 1,
"well": [
"A2"
],
"labware": "elution plate"
},
"Liquid_1": {
"slot": 2,
"well": [
"A1",
"A2",
"A4"
],
"labware": "reagent reservoir"
},
"Liquid_4": {
"slot": 2,
"well": [
"A1",
"A2",
"A4"
],
"labware": "reagent reservoir"
},
"Liquid_5": {
"slot": 2,
"well": [
"A1",
"A2",
"A4"
],
"labware": "reagent reservoir"
},
"Liquid_2": {
"slot": 4,
"well": [
"A2"
],
"labware": "TAG1 plate on Magnetic Module GEN2"
},
"Liquid_3": {
"slot": 12,
"well": [
"A1"
],
"labware": "Opentrons Fixed Trash"
}
}
}

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@@ -0,0 +1,63 @@
{
"steps_info": [
{
"step_number": 1,
"action": "transfer_liquid",
"parameters": {
"source": "sample supernatant",
"target": "antibody-coated well",
"volume": 100
}
},
{
"step_number": 2,
"action": "transfer_liquid",
"parameters": {
"source": "washing buffer",
"target": "antibody-coated well",
"volume": 200
}
},
{
"step_number": 3,
"action": "transfer_liquid",
"parameters": {
"source": "washing buffer",
"target": "antibody-coated well",
"volume": 200
}
},
{
"step_number": 4,
"action": "transfer_liquid",
"parameters": {
"source": "washing buffer",
"target": "antibody-coated well",
"volume": 200
}
},
{
"step_number": 5,
"action": "transfer_liquid",
"parameters": {
"source": "TMB substrate",
"target": "antibody-coated well",
"volume": 100
}
}
],
"labware_info": [
{"reagent_name": "sample supernatant", "material_name": "96深孔板", "positions": 1},
{"reagent_name": "washing buffer", "material_name": "储液槽", "positions": 2},
{"reagent_name": "TMB substrate", "material_name": "储液槽", "positions": 3},
{"reagent_name": "antibody-coated well", "material_name": "96 细胞培养皿", "positions": 4},
{"reagent_name": "", "material_name": "300μL Tip头", "positions": 5},
{"reagent_name": "", "material_name": "300μL Tip头", "positions": 6},
{"reagent_name": "", "material_name": "300μL Tip头", "positions": 7},
{"reagent_name": "", "material_name": "300μL Tip头", "positions": 8},
{"reagent_name": "", "material_name": "300μL Tip头", "positions": 9},
{"reagent_name": "", "material_name": "300μL Tip头", "positions": 10},
{"reagent_name": "", "material_name": "300μL Tip头", "positions": 11},
{"reagent_name": "", "material_name": "300μL Tip头", "positions": 13}
]
}

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@@ -0,0 +1,94 @@
import json
import sys
from datetime import datetime
from pathlib import Path
ROOT_DIR = Path(__file__).resolve().parents[2]
if str(ROOT_DIR) not in sys.path:
sys.path.insert(0, str(ROOT_DIR))
import pytest
from scripts.workflow import build_protocol_graph, draw_protocol_graph, draw_protocol_graph_with_ports
ROOT_DIR = Path(__file__).resolve().parents[2]
if str(ROOT_DIR) not in sys.path:
sys.path.insert(0, str(ROOT_DIR))
def _normalize_steps(data):
normalized = []
for step in data:
action = step.get("action") or step.get("operation")
if not action:
continue
raw_params = step.get("parameters") or step.get("action_args") or {}
params = dict(raw_params)
if "source" in raw_params and "sources" not in raw_params:
params["sources"] = raw_params["source"]
if "target" in raw_params and "targets" not in raw_params:
params["targets"] = raw_params["target"]
description = step.get("description") or step.get("purpose")
step_dict = {"action": action, "parameters": params}
if description:
step_dict["description"] = description
normalized.append(step_dict)
return normalized
def _normalize_labware(data):
labware = {}
for item in data:
reagent_name = item.get("reagent_name")
key = reagent_name or item.get("material_name") or item.get("name")
if not key:
continue
key = str(key)
idx = 1
original_key = key
while key in labware:
idx += 1
key = f"{original_key}_{idx}"
labware[key] = {
"slot": item.get("positions") or item.get("slot"),
"labware": item.get("material_name") or item.get("labware"),
"well": item.get("well", []),
"type": item.get("type", "reagent"),
"role": item.get("role", ""),
"name": key,
}
return labware
@pytest.mark.parametrize("protocol_name", [
"example_bio",
# "bioyond_materials_liquidhandling_1",
"example_prcxi",
])
def test_build_protocol_graph(protocol_name):
data_path = Path(__file__).with_name(f"{protocol_name}.json")
with data_path.open("r", encoding="utf-8") as fp:
d = json.load(fp)
if "workflow" in d and "reagent" in d:
protocol_steps = d["workflow"]
labware_info = d["reagent"]
elif "steps_info" in d and "labware_info" in d:
protocol_steps = _normalize_steps(d["steps_info"])
labware_info = _normalize_labware(d["labware_info"])
else:
raise ValueError("Unsupported protocol format")
graph = build_protocol_graph(
labware_info=labware_info,
protocol_steps=protocol_steps,
workstation_name="PRCXi",
)
timestamp = datetime.now().strftime("%Y%m%d_%H%M")
output_path = data_path.with_name(f"{protocol_name}_graph_{timestamp}.png")
draw_protocol_graph_with_ports(graph, str(output_path))
print(graph)

View File

@@ -11,18 +11,14 @@ from typing import Dict, Any, List
import networkx as nx
import yaml
from unilabos.ros.nodes.resource_tracker import ResourceTreeSet, ResourceDict
# 首先添加项目根目录到路径
current_dir = os.path.dirname(os.path.abspath(__file__))
unilabos_dir = os.path.dirname(os.path.dirname(current_dir))
if unilabos_dir not in sys.path:
sys.path.append(unilabos_dir)
from unilabos.config.config import load_config, BasicConfig, HTTPConfig
from unilabos.utils.banner_print import print_status, print_unilab_banner
from unilabos.resources.graphio import modify_to_backend_format
from unilabos.config.config import load_config, BasicConfig, HTTPConfig
def load_config_from_file(config_path):
if config_path is None:
@@ -184,6 +180,7 @@ def main():
working_dir = os.path.abspath(os.getcwd())
else:
working_dir = os.path.abspath(os.path.join(os.getcwd(), "unilabos_data"))
if args_dict.get("working_dir"):
working_dir = args_dict.get("working_dir", "")
if config_path and not os.path.exists(config_path):
@@ -215,6 +212,14 @@ def main():
# 加载配置文件
print_status(f"当前工作目录为 {working_dir}", "info")
load_config_from_file(config_path)
# 根据配置重新设置日志级别
from unilabos.utils.log import configure_logger, logger
if hasattr(BasicConfig, "log_level"):
logger.info(f"Log level set to '{BasicConfig.log_level}' from config file.")
configure_logger(loglevel=BasicConfig.log_level)
if args_dict["addr"] == "test":
print_status("使用测试环境地址", "info")
HTTPConfig.remote_addr = "https://uni-lab.test.bohrium.com/api/v1"
@@ -268,6 +273,8 @@ def main():
from unilabos.app.web import http_client
from unilabos.app.web import start_server
from unilabos.app.register import register_devices_and_resources
from unilabos.resources.graphio import modify_to_backend_format
from unilabos.ros.nodes.resource_tracker import ResourceTreeSet, ResourceDict
# 显示启动横幅
print_unilab_banner(args_dict)
@@ -349,7 +356,7 @@ def main():
if BasicConfig.upload_registry:
# 设备注册到服务端 - 需要 ak 和 sk
if args_dict.get("ak") and args_dict.get("sk"):
if BasicConfig.ak and BasicConfig.sk:
print_status("开始注册设备到服务端...", "info")
try:
register_devices_and_resources(lab_registry)

View File

@@ -6,6 +6,8 @@ HTTP客户端模块
import json
import os
import time
from threading import Thread
from typing import List, Dict, Any, Optional
import requests
@@ -73,6 +75,8 @@ class HTTPClient:
Returns:
Dict[str, str]: 旧UUID到新UUID的映射关系 {old_uuid: new_uuid}
"""
with open(os.path.join(BasicConfig.working_dir, "req_resource_tree_add.json"), "w", encoding="utf-8") as f:
f.write(json.dumps({"nodes": [x for xs in resources.dump() for x in xs], "mount_uuid": mount_uuid}, indent=4))
# 从序列化数据中提取所有节点的UUID保存旧UUID
old_uuids = {n.res_content.uuid: n for n in resources.all_nodes}
if not self.initialized or first_add:
@@ -82,16 +86,18 @@ class HTTPClient:
f"{self.remote_addr}/edge/material",
json={"nodes": [x for xs in resources.dump() for x in xs], "mount_uuid": mount_uuid},
headers={"Authorization": f"Lab {self.auth}"},
timeout=100,
timeout=60,
)
else:
response = requests.put(
f"{self.remote_addr}/edge/material",
json={"nodes": [x for xs in resources.dump() for x in xs], "mount_uuid": mount_uuid},
headers={"Authorization": f"Lab {self.auth}"},
timeout=100,
timeout=10,
)
with open(os.path.join(BasicConfig.working_dir, "res_resource_tree_add.json"), "w", encoding="utf-8") as f:
f.write(f"{response.status_code}" + "\n" + response.text)
# 处理响应构建UUID映射
uuid_mapping = {}
if response.status_code == 200:
@@ -122,12 +128,16 @@ class HTTPClient:
Returns:
Dict[str, str]: 旧UUID到新UUID的映射关系 {old_uuid: new_uuid}
"""
with open(os.path.join(BasicConfig.working_dir, "req_resource_tree_get.json"), "w", encoding="utf-8") as f:
f.write(json.dumps({"uuids": uuid_list, "with_children": with_children}, indent=4))
response = requests.post(
f"{self.remote_addr}/edge/material/query",
json={"uuids": uuid_list, "with_children": with_children},
headers={"Authorization": f"Lab {self.auth}"},
timeout=100,
)
with open(os.path.join(BasicConfig.working_dir, "res_resource_tree_get.json"), "w", encoding="utf-8") as f:
f.write(f"{response.status_code}" + "\n" + response.text)
if response.status_code == 200:
res = response.json()
if "code" in res and res["code"] != 0:
@@ -183,12 +193,16 @@ class HTTPClient:
Returns:
Dict: 返回的资源数据
"""
with open(os.path.join(BasicConfig.working_dir, "req_resource_get.json"), "w", encoding="utf-8") as f:
f.write(json.dumps({"id": id, "with_children": with_children}, indent=4))
response = requests.get(
f"{self.remote_addr}/lab/material",
params={"id": id, "with_children": with_children},
headers={"Authorization": f"Lab {self.auth}"},
timeout=20,
)
with open(os.path.join(BasicConfig.working_dir, "res_resource_get.json"), "w", encoding="utf-8") as f:
f.write(f"{response.status_code}" + "\n" + response.text)
return response.json()
def resource_del(self, id: str) -> requests.Response:

View File

@@ -2,7 +2,7 @@ import base64
import traceback
import os
import importlib.util
from typing import Optional
from typing import Optional, Literal
from unilabos.utils import logger
@@ -18,6 +18,7 @@ class BasicConfig:
vis_2d_enable = False
enable_resource_load = True
communication_protocol = "websocket"
log_level: Literal['TRACE', 'DEBUG', 'INFO', 'WARNING', 'ERROR', 'CRITICAL'] = "DEBUG" # 'TRACE', 'DEBUG', 'INFO', 'WARNING', 'ERROR', 'CRITICAL'
@classmethod
def auth_secret(cls):

View File

@@ -0,0 +1,296 @@
# -*- coding: utf-8 -*-
import serial
import time
import csv
import threading
import os
from collections import deque
from typing import Dict, Any, Optional
from pylabrobot.resources import Deck
from unilabos.devices.workstation.workstation_base import WorkstationBase
class ElectrolysisWaterPlatform(WorkstationBase):
"""
电解水平台工作站
基于 WorkstationBase 的电解水实验平台,支持串口通信和数据采集
"""
def __init__(
self,
deck: Deck,
port: str = "COM10",
baudrate: int = 115200,
csv_path: Optional[str] = None,
timeout: float = 0.2,
**kwargs
):
super().__init__(deck, **kwargs)
# ========== 配置 ==========
self.port = port
self.baudrate = baudrate
# 如果没有指定路径,默认保存在代码文件所在目录
if csv_path is None:
current_dir = os.path.dirname(os.path.abspath(__file__))
self.csv_path = os.path.join(current_dir, "stm32_data.csv")
else:
self.csv_path = csv_path
self.ser_timeout = timeout
self.chunk_read = 128
# 串口对象
self.ser: Optional[serial.Serial] = None
self.stop_flag = False
# 线程对象
self.rx_thread: Optional[threading.Thread] = None
self.tx_thread: Optional[threading.Thread] = None
# ==== 接收(下位机->上位机):固定 1+13+1 = 15 字节 ====
self.RX_HEAD = 0x3E
self.RX_TAIL = 0x3E
self.RX_FRAME_LEN = 1 + 13 + 1 # 15
# ==== 发送(上位机->下位机):固定 1+9+1 = 11 字节 ====
self.TX_HEAD = 0x3E
self.TX_TAIL = 0xE3 # 协议图中标注 E3 作为帧尾
self.TX_FRAME_LEN = 1 + 9 + 1 # 11
def open_serial(self, port: Optional[str] = None, baudrate: Optional[int] = None, timeout: Optional[float] = None) -> Optional[serial.Serial]:
"""打开串口"""
port = port or self.port
baudrate = baudrate or self.baudrate
timeout = timeout or self.ser_timeout
try:
ser = serial.Serial(port, baudrate, timeout=timeout)
print(f"[OK] 串口 {port} 已打开,波特率 {baudrate}")
ser.reset_input_buffer()
ser.reset_output_buffer()
self.ser = ser
return ser
except serial.SerialException as e:
print(f"[ERR] 无法打开串口 {port}: {e}")
return None
def close_serial(self):
"""关闭串口"""
if self.ser and self.ser.is_open:
self.ser.close()
print("[INFO] 串口已关闭")
@staticmethod
def u16_be(h: int, l: int) -> int:
"""将两个字节组合成16位无符号整数大端序"""
return ((h & 0xFF) << 8) | (l & 0xFF)
@staticmethod
def split_u16_be(val: int) -> tuple:
"""返回 (高字节, 低字节),输入会夹到 0..65535"""
v = int(max(0, min(65535, int(val))))
return (v >> 8) & 0xFF, v & 0xFF
# ================== 接收固定15字节 ==================
def parse_rx_payload(self, dat13: bytes) -> Optional[Dict[str, Any]]:
"""解析 13 字节数据区(下位机发送到上位机)"""
if len(dat13) != 13:
return None
current_mA = self.u16_be(dat13[0], dat13[1])
voltage_mV = self.u16_be(dat13[2], dat13[3])
temperature_raw = self.u16_be(dat13[4], dat13[5])
tds_ppm = self.u16_be(dat13[6], dat13[7])
gas_sccm = self.u16_be(dat13[8], dat13[9])
liquid_mL = self.u16_be(dat13[10], dat13[11])
ph_raw = dat13[12] & 0xFF
return {
"Current_mA": current_mA,
"Voltage_mV": voltage_mV,
"Temperature_C": round(temperature_raw / 100.0, 2),
"TDS_ppm": tds_ppm,
"GasFlow_sccm": gas_sccm,
"LiquidFlow_mL": liquid_mL,
"pH": round(ph_raw / 10.0, 2)
}
def try_parse_rx_frame(self, frame15: bytes) -> Optional[Dict[str, Any]]:
"""尝试解析接收帧"""
if len(frame15) != self.RX_FRAME_LEN:
return None
if frame15[0] != self.RX_HEAD or frame15[-1] != self.RX_TAIL:
return None
return self.parse_rx_payload(frame15[1:-1])
def rx_thread_fn(self):
"""接收线程函数"""
headers = ["Timestamp", "Current_mA", "Voltage_mV",
"Temperature_C", "TDS_ppm", "GasFlow_sccm", "LiquidFlow_mL", "pH"]
new_file = not os.path.exists(self.csv_path)
f = open(self.csv_path, mode='a', newline='', encoding='utf-8')
writer = csv.writer(f)
if new_file:
writer.writerow(headers)
f.flush()
buf = deque(maxlen=8192)
print(f"[RX] 开始接收(帧长 {self.RX_FRAME_LEN} 字节);写入:{self.csv_path}")
try:
while not self.stop_flag and self.ser and self.ser.is_open:
chunk = self.ser.read(self.chunk_read)
if chunk:
buf.extend(chunk)
while True:
# 找帧头
try:
start = next(i for i, b in enumerate(buf) if b == self.RX_HEAD)
except StopIteration:
buf.clear()
break
if start > 0:
for _ in range(start):
buf.popleft()
if len(buf) < self.RX_FRAME_LEN:
break
candidate = bytes([buf[i] for i in range(self.RX_FRAME_LEN)])
if candidate[-1] == self.RX_TAIL:
parsed = self.try_parse_rx_frame(candidate)
for _ in range(self.RX_FRAME_LEN):
buf.popleft()
if parsed:
ts = time.strftime("%Y-%m-%d %H:%M:%S")
row = [ts,
parsed["Current_mA"], parsed["Voltage_mV"],
parsed["Temperature_C"], parsed["TDS_ppm"],
parsed["GasFlow_sccm"], parsed["LiquidFlow_mL"],
parsed["pH"]]
writer.writerow(row)
f.flush()
# 若不想打印可注释下一行
# print(f"[{ts}] I={parsed['Current_mA']} mA, V={parsed['Voltage_mV']} mV, "
# f"T={parsed['Temperature_C']} °C, TDS={parsed['TDS_ppm']}, "
# f"Gas={parsed['GasFlow_sccm']} sccm, Liq={parsed['LiquidFlow_mL']} mL, pH={parsed['pH']}")
else:
# 头不变尾不对丢1字节继续对齐
buf.popleft()
else:
time.sleep(0.01)
finally:
f.close()
print("[RX] 接收线程退出CSV 已关闭")
# ================== 发送固定11字节 ==================
def build_tx_frame(self, mode: int, current_ma: int, voltage_mv: int, temp_c: float, ki: float, pump_percent: float) -> bytes:
"""
发送帧HEAD + [mode, I_hi, I_lo, V_hi, V_lo, T_hi, T_lo, Ki_byte, Pump_byte] + TAIL
- mode: 0=恒压, 1=恒流
- current_ma: mA (0..65535)
- voltage_mv: mV (0..65535)
- temp_c: ℃,将 *100 后拆分为高/低字节
- ki: 0.0..20.0 -> byte = round(ki * 10) 夹到 0..200
- pump_percent: 0..100 -> byte = round(pump * 2) 夹到 0..200
"""
mode_b = 1 if int(mode) == 1 else 0
i_hi, i_lo = self.split_u16_be(current_ma)
v_hi, v_lo = self.split_u16_be(voltage_mv)
t100 = int(round(float(temp_c) * 100.0))
t_hi, t_lo = self.split_u16_be(t100)
ki_b = int(max(0, min(200, round(float(ki) * 10))))
pump_b = int(max(0, min(200, round(float(pump_percent) * 2))))
return bytes((
self.TX_HEAD,
mode_b,
i_hi, i_lo,
v_hi, v_lo,
t_hi, t_lo,
ki_b,
pump_b,
self.TX_TAIL
))
def tx_thread_fn(self):
"""
发送线程函数
用户输入 6 个用逗号分隔的数值:
mode,current_mA,voltage_mV,set_temp_C,Ki,pump_percent
例如: 0,1000,500,0,0,50
"""
print("\n输入 6 个值(用英文逗号分隔),顺序为:")
print("mode,current_mA,voltage_mV,set_temp_C,Ki,pump_percent")
print("示例恒压0,500,1000,25,0,100 stop 结束)\n")
print("示例恒流1,1000,500,25,0,100 stop 结束)\n")
print("示例恒流1,2000,500,25,0,100 stop 结束)\n")
# 1,2000,500,25,0,100
while not self.stop_flag and self.ser and self.ser.is_open:
try:
line = input(">>> ").strip()
except EOFError:
self.stop_flag = True
break
if not line:
continue
if line.lower() == "stop":
self.stop_flag = True
print("[SYS] 停止程序")
break
try:
parts = [p.strip() for p in line.split(",")]
if len(parts) != 6:
raise ValueError("需要 6 个逗号分隔的数值")
mode = int(parts[0])
i_ma = int(float(parts[1]))
v_mv = int(float(parts[2]))
t_c = float(parts[3])
ki = float(parts[4])
pump = float(parts[5])
frame = self.build_tx_frame(mode, i_ma, v_mv, t_c, ki, pump)
self.ser.write(frame)
print("[TX]", " ".join(f"{b:02X}" for b in frame))
except Exception as e:
print("[TX] 输入/打包失败:", e)
print("格式mode,current_mA,voltage_mV,set_temp_C,Ki,pump_percent")
continue
def start(self):
"""启动电解水平台"""
self.ser = self.open_serial()
if self.ser:
try:
self.rx_thread = threading.Thread(target=self.rx_thread_fn, daemon=True)
self.tx_thread = threading.Thread(target=self.tx_thread_fn, daemon=True)
self.rx_thread.start()
self.tx_thread.start()
print("[INFO] 电解水平台已启动")
self.tx_thread.join() # 等待用户输入线程结束(输入 stop
finally:
self.close_serial()
def stop(self):
"""停止电解水平台"""
self.stop_flag = True
if self.rx_thread and self.rx_thread.is_alive():
self.rx_thread.join(timeout=2.0)
if self.tx_thread and self.tx_thread.is_alive():
self.tx_thread.join(timeout=2.0)
self.close_serial()
print("[INFO] 电解水平台已停止")
# ================== 主入口 ==================
if __name__ == "__main__":
# 创建一个简单的 Deck 用于测试
from pylabrobot.resources import Deck
deck = Deck()
platform = ElectrolysisWaterPlatform(deck)
platform.start()

View File

@@ -37,7 +37,7 @@ def _initialize_material_system(self, deck_config: Dict[str, Any], children_conf
**定义在**: `workstation_base.py`
**设计目的**
- 提供外部物料系统如Bioyong、LIMS等集成的标准接口
- 提供外部物料系统如Bioyond、LIMS等集成的标准接口
- 双向同步从外部系统同步到本地deck以及将本地变更同步到外部系统
- 处理外部系统的变更通知
@@ -59,7 +59,7 @@ async def handle_external_change(self, change_info: Dict[str, Any]) -> bool:
**扩展功能**
- HTTP报送接收服务集成
- 具体工作流实现(液体转移、板洗等)
- Bioyong物料系统同步器示例
- Bioyond物料系统同步器示例
- 外部报送处理方法
## 技术栈
@@ -142,11 +142,11 @@ success = workstation.execute_workflow("liquid_transfer", {
### 3. 外部系统集成
```python
class BioyongResourceSynchronizer(ResourceSynchronizer):
"""Bioyong系统同步器"""
class BioyondResourceSynchronizer(ResourceSynchronizer):
"""Bioyond系统同步器"""
async def sync_from_external(self) -> bool:
# 从Bioyong API获取物料
# 从Bioyond API获取物料
external_materials = await self._fetch_bioyong_materials()
# 转换并添加到本地deck

View File

@@ -0,0 +1,715 @@
# -*- coding: utf-8 -*-
from typing import Dict, Any, List, Optional
from datetime import datetime, timezone
import requests
from pathlib import Path
import pandas as pd
import time
from datetime import datetime, timezone, timedelta
import re
import threading
from unilabos.devices.workstation.workstation_base import WorkstationBase
from unilabos.devices.workstation.workstation_http_service import WorkstationHTTPService
from unilabos.utils.log import logger
from pylabrobot.resources.deck import Deck
def _iso_utc_now_ms() -> str:
# 文档要求:到毫秒 + Z例如 2025-08-15T05:43:22.814Z
dt = datetime.now(timezone.utc)
return dt.strftime("%Y-%m-%dT%H:%M:%S.") + f"{int(dt.microsecond/1000):03d}Z"
class BioyondWorkstation(WorkstationBase):
"""
集成 Bioyond LIMS 的工作站示例,
覆盖:入库(2.17/2.18) → 新建实验(2.14) → 启动调度(2.7) →
运行中推送:物料变更(2.24)、步骤完成(2.21)、订单完成(2.23) →
查询实验(2.5/2.6) → 3-2-1 转运(2.32) → 样品/废料取出(2.28)
"""
def __init__(
self,
bioyond_config: Optional[Dict[str, Any]] = None,
station_resource: Optional[Dict[str, Any]] = None,
debug_mode: bool = False, # 增加调试模式开关
*args, **kwargs,
):
self.bioyond_config = bioyond_config or {
"base_url": "http://192.168.1.200:44386",
"api_key": "8A819E5C",
"timeout": 30,
"report_token": "CHANGE_ME_TOKEN"
}
self.http_service_started = False
self.debug_mode = debug_mode
super().__init__(deck=Deck, station_resource=station_resource, *args, **kwargs)
logger.info(f"Bioyond工作站初始化完成 (debug_mode={self.debug_mode})")
# 实例化并在后台线程启动 HTTP 报送服务
self.order_status = {}
try:
t = threading.Thread(target=self._start_http_service_bg, daemon=True, name="unilab_http")
t.start()
except Exception as e:
logger.error(f"unilab-server后台启动报送服务失败: {e}")
@property
def device_id(self) -> str:
try:
return getattr(self, "_ros_node").device_id # 兼容 ROS 场景
except Exception:
return "bioyond_workstation"
def _start_http_service_bg(self, host: str = "192.168.1.104", port: int = 8080) -> None:
logger.info("进入 _start_http_service_bg 函数")
try:
self.service = WorkstationHTTPService(self, host=host, port=port)
logger.info("WorkstationHTTPService 实例化完成")
self.service.start()
self.http_service_started = True
logger.info(f"unilab_HTTP 服务成功启动: {host}:{port}")
#一直挂着,直到进程退出
while True:
time.sleep(1)
except Exception as e:
self.http_service_started = False
logger.error(f"启动unilab_HTTP服务失败: {e}", exc_info=True)
# -------------------- 基础HTTP封装 --------------------
def _url(self, path: str) -> str:
return f"{self.bioyond_config['base_url'].rstrip('/')}/{path.lstrip('/')}"
def _post_lims(self, path: str, data: Optional[Any] = None) -> Dict[str, Any]:
"""LIMS API大多数接口用 {apiKey/requestTime,data} 包装"""
payload = {
"apiKey": self.bioyond_config["api_key"],
"requestTime": _iso_utc_now_ms()
}
if data is not None:
payload["data"] = data
if self.debug_mode:
# 模拟返回,不发真实请求
logger.info(f"[DEBUG] POST {path} with payload={payload}")
return {"debug": True, "url": self._url(path), "payload": payload, "status": "ok"}
try:
r = requests.post(
self._url(path),
json=payload,
timeout=self.bioyond_config.get("timeout", 30),
headers={"Content-Type": "application/json"}
)
r.raise_for_status()
return r.json()
except Exception as e:
logger.error(f"POST {path} 失败: {e}")
return {"error": str(e)}
# --- 修正_post_report / _post_report_raw 同样走 debug_mode ---
def _post_report(self, path: str, data: Dict[str, Any]) -> Dict[str, Any]:
payload = {
"token": self.bioyond_config.get("report_token", ""),
"request_time": _iso_utc_now_ms(),
"data": data
}
if self.debug_mode:
logger.info(f"[DEBUG] POST {path} with payload={payload}")
return {"debug": True, "url": self._url(path), "payload": payload, "status": "ok"}
try:
r = requests.post(self._url(path), json=payload,
timeout=self.bioyond_config.get("timeout", 30),
headers={"Content-Type": "application/json"})
r.raise_for_status()
return r.json()
except Exception as e:
logger.error(f"POST {path} 失败: {e}")
return {"error": str(e)}
def _post_report_raw(self, path: str, body: Dict[str, Any]) -> Dict[str, Any]:
if self.debug_mode:
logger.info(f"[DEBUG] POST {path} with body={body}")
return {"debug": True, "url": self._url(path), "payload": body, "status": "ok"}
try:
r = requests.post(self._url(path), json=body,
timeout=self.bioyond_config.get("timeout", 30),
headers={"Content-Type": "application/json"})
r.raise_for_status()
return r.json()
except Exception as e:
logger.error(f"POST {path} 失败: {e}")
return {"error": str(e)}
# -------------------- 单点接口封装 --------------------
# 2.17 入库物料(单个)
def storage_inbound(self, material_id: str, location_id: str) -> Dict[str, Any]:
return self._post_lims("/api/lims/storage/inbound", {
"materialId": material_id,
"locationId": location_id
})
# 2.18 批量入库(多个)
def storage_batch_inbound(self, items: List[Dict[str, str]]) -> Dict[str, Any]:
"""
items = [{"materialId": "...", "locationId": "..."}, ...]
"""
return self._post_lims("/api/lims/storage/batch-inbound", items)
# 3.30 自动化上料Excel -> JSON -> POST /api/lims/order/auto-feeding4to3
def auto_feeding4to3_from_xlsx(self, xlsx_path: str) -> Dict[str, Any]:
"""
根据固定模板解析 Excel
- 四号手套箱加样头面 (2-13行, 3-7列)
- 四号手套箱原液瓶面 (15-23行, 3-9列)
- 三号手套箱人工堆栈 (26-40行, 3-7列)
"""
path = Path(xlsx_path)
if not path.exists():
raise FileNotFoundError(f"未找到 Excel 文件:{path}")
try:
df = pd.read_excel(path, sheet_name=0, header=None, engine="openpyxl")
except Exception as e:
raise RuntimeError(f"读取 Excel 失败:{e}")
items: List[Dict[str, Any]] = []
# 四号手套箱 - 加样头面2-13行, 3-7列
for _, row in df.iloc[1:13, 2:7].iterrows():
item = {
"sourceWHName": "四号手套箱堆栈",
"posX": int(row[2]),
"posY": int(row[3]),
"posZ": int(row[4]),
"materialName": str(row[5]).strip() if pd.notna(row[5]) else "",
"quantity": float(row[6]) if pd.notna(row[6]) else 0.0,
}
if item["materialName"]:
items.append(item)
# 四号手套箱 - 原液瓶面15-23行, 3-9列
for _, row in df.iloc[14:23, 2:9].iterrows():
item = {
"sourceWHName": "四号手套箱堆栈",
"posX": int(row[2]),
"posY": int(row[3]),
"posZ": int(row[4]),
"materialName": str(row[5]).strip() if pd.notna(row[5]) else "",
"quantity": float(row[6]) if pd.notna(row[6]) else 0.0,
"materialType": str(row[7]).strip() if pd.notna(row[7]) else "",
"targetWH": str(row[8]).strip() if pd.notna(row[8]) else "",
}
if item["materialName"]:
items.append(item)
# 三号手套箱人工堆栈26-40行, 3-7列
for _, row in df.iloc[25:40, 2:7].iterrows():
item = {
"sourceWHName": "三号手套箱人工堆栈",
"posX": int(row[2]),
"posY": int(row[3]),
"posZ": int(row[4]),
"materialType": str(row[5]).strip() if pd.notna(row[5]) else "",
"materialId": str(row[6]).strip() if pd.notna(row[6]) else "",
"quantity": 1 # 默认数量1
}
if item["materialId"] or item["materialType"]:
items.append(item)
return self._post_lims("/api/lims/order/auto-feeding4to3", items)
def auto_batch_outbound_from_xlsx(self, xlsx_path: str) -> Dict[str, Any]:
"""
3.31 自动化下料Excel -> JSON -> POST /api/lims/storage/auto-batch-out-bound
"""
path = Path(xlsx_path)
if not path.exists():
raise FileNotFoundError(f"未找到 Excel 文件:{path}")
try:
df = pd.read_excel(path, sheet_name=0, engine="openpyxl")
except Exception as e:
raise RuntimeError(f"读取 Excel 失败:{e}")
def pick(names: List[str]) -> Optional[str]:
for n in names:
if n in df.columns:
return n
return None
c_loc = pick(["locationId", "库位ID", "库位Id", "库位id"])
c_wh = pick(["warehouseId", "仓库ID", "仓库Id", "仓库id"])
c_qty = pick(["数量", "quantity"])
c_x = pick(["x", "X", "posX", "坐标X"])
c_y = pick(["y", "Y", "posY", "坐标Y"])
c_z = pick(["z", "Z", "posZ", "坐标Z"])
required = [c_loc, c_wh, c_qty, c_x, c_y, c_z]
if any(c is None for c in required):
raise KeyError("Excel 缺少必要列locationId/warehouseId/数量/x/y/z支持多别名至少要能匹配到")
def as_int(v, d=0):
try:
if pd.isna(v): return d
return int(v)
except Exception:
try:
return int(float(v))
except Exception:
return d
def as_float(v, d=0.0):
try:
if pd.isna(v): return d
return float(v)
except Exception:
return d
def as_str(v, d=""):
if v is None or (isinstance(v, float) and pd.isna(v)): return d
s = str(v).strip()
return s if s else d
items: List[Dict[str, Any]] = []
for _, row in df.iterrows():
items.append({
"locationId": as_str(row[c_loc]),
"warehouseId": as_str(row[c_wh]),
"quantity": as_float(row[c_qty]),
"x": as_int(row[c_x]),
"y": as_int(row[c_y]),
"z": as_int(row[c_z]),
})
return self._post_lims("/api/lims/storage/auto-batch-out-bound", items)
# 2.14 新建实验
def create_orders(self, xlsx_path: str) -> Dict[str, Any]:
"""
从 Excel 解析并创建实验2.14
约定:
- batchId = Excel 文件名(不含扩展名)
- 物料列:所有以 "(g)" 结尾(不再读取“总质量(g)”列)
- totalMass 自动计算为所有物料质量之和
- createTime 缺失或为空时自动填充为当前日期YYYY/M/D
"""
path = Path(xlsx_path)
if not path.exists():
raise FileNotFoundError(f"未找到 Excel 文件:{path}")
try:
df = pd.read_excel(path, sheet_name=0, engine="openpyxl")
except Exception as e:
raise RuntimeError(f"读取 Excel 失败:{e}")
# 列名容错:返回可选列名,找不到则返回 None
def _pick(col_names: List[str]) -> Optional[str]:
for c in col_names:
if c in df.columns:
return c
return None
col_order_name = _pick(["配方ID", "orderName", "订单编号"])
col_create_time = _pick(["创建日期", "createTime"])
col_bottle_type = _pick(["配液瓶类型", "bottleType"])
col_mix_time = _pick(["混匀时间(s)", "mixTime"])
col_load = _pick(["扣电组装分液体积", "loadSheddingInfo"])
col_pouch = _pick(["软包组装分液体积", "pouchCellInfo"])
col_cond = _pick(["电导测试分液体积", "conductivityInfo"])
col_cond_cnt = _pick(["电导测试分液瓶数", "conductivityBottleCount"])
# 物料列:所有以 (g) 结尾
material_cols = [c for c in df.columns if isinstance(c, str) and c.endswith("(g)")]
if not material_cols:
raise KeyError("未发现任何以“(g)”结尾的物料列,请检查表头。")
batch_id = path.stem
def _to_ymd_slash(v) -> str:
# 统一为 "YYYY/M/D";为空或解析失败则用当前日期
if v is None or (isinstance(v, float) and pd.isna(v)) or str(v).strip() == "":
ts = datetime.now()
else:
try:
ts = pd.to_datetime(v)
except Exception:
ts = datetime.now()
return f"{ts.year}/{ts.month}/{ts.day}"
def _as_int(val, default=0) -> int:
try:
if pd.isna(val):
return default
return int(val)
except Exception:
return default
def _as_str(val, default="") -> str:
if val is None or (isinstance(val, float) and pd.isna(val)):
return default
s = str(val).strip()
return s if s else default
orders: List[Dict[str, Any]] = []
for idx, row in df.iterrows():
mats: List[Dict[str, Any]] = []
total_mass = 0.0
for mcol in material_cols:
val = row.get(mcol, None)
if val is None or (isinstance(val, float) and pd.isna(val)):
continue
try:
mass = float(val)
except Exception:
continue
if mass > 0:
mats.append({"name": mcol.replace("(g)", ""), "mass": mass})
total_mass += mass
order_data = {
"batchId": batch_id,
"orderName": _as_str(row[col_order_name], default=f"{batch_id}_order_{idx+1}") if col_order_name else f"{batch_id}_order_{idx+1}",
"createTime": _to_ymd_slash(row[col_create_time]) if col_create_time else _to_ymd_slash(None),
"bottleType": _as_str(row[col_bottle_type], default="配液小瓶") if col_bottle_type else "配液小瓶",
"mixTime": _as_int(row[col_mix_time]) if col_mix_time else 0,
"loadSheddingInfo": _as_int(row[col_load]) if col_load else 0,
"pouchCellInfo": _as_int(row[col_pouch]) if col_pouch else 0,
"conductivityInfo": _as_int(row[col_cond]) if col_cond else 0,
"conductivityBottleCount": _as_int(row[col_cond_cnt]) if col_cond_cnt else 0,
"materialInfos": mats,
"totalMass": round(total_mass, 4) # 自动汇总
}
orders.append(order_data)
# print(orders)
response = self._post_lims("/api/lims/order/orders", orders)
self.order_status[response["data"]["orderCode"]] = "running"
while True:
time.sleep(5)
if self.order_status.get(response["data"]["orderCode"], None) == "finished":
logger.info(f"配液实验已完成 ,即将执行 3-2-1 转运")
break
logger.info(f"等待配液实验完成")
self.transfer_3_to_2_to_1()
r321 = self.wait_for_transfer_task()
logger.info(f"3-2-1 转运完成,返回结果")
return r321
# 2.7 启动调度
def scheduler_start(self) -> Dict[str, Any]:
return self._post_lims("/api/lims/scheduler/start")
# 3.10 停止调度
def scheduler_stop(self) -> Dict[str, Any]:
"""
停止调度 (3.10)
请求体只包含 apiKey 和 requestTime
"""
return self._post_lims("/api/lims/scheduler/stop")
# 2.9 继续调度
def scheduler_continue(self) -> Dict[str, Any]:
"""
继续调度 (2.9)
请求体只包含 apiKey 和 requestTime
"""
return self._post_lims("/api/lims/scheduler/continue")
# 2.24 物料变更推送
def report_material_change(self, material_obj: Dict[str, Any]) -> Dict[str, Any]:
"""
material_obj 按 2.24 的裸对象格式(包含 id/typeName/locations/detail 等)
"""
return self._post_report_raw("/report/material_change", material_obj)
# 2.21 步骤完成推送BS → LIMS
def report_step_finish(self,
order_code: str,
order_name: str,
step_name: str,
step_id: str,
sample_id: str,
start_time: str,
end_time: str,
execution_status: str = "completed") -> Dict[str, Any]:
data = {
"orderCode": order_code,
"orderName": order_name,
"stepName": step_name,
"stepId": step_id,
"sampleId": sample_id,
"startTime": start_time,
"endTime": end_time,
"executionStatus": execution_status
}
return self._post_report("/report/step_finish", data)
# 2.23 订单完成推送BS → LIMS
def report_order_finish(self,
order_code: str,
order_name: str,
start_time: str,
end_time: str,
status: str = "30", # 30 完成 / -11 异常停止 / -12 人工停止
workflow_status: str = "Finished",
completion_time: Optional[str] = None,
used_materials: Optional[List[Dict[str, Any]]] = None) -> Dict[str, Any]:
data = {
"orderCode": order_code,
"orderName": order_name,
"startTime": start_time,
"endTime": end_time,
"status": status,
"workflowStatus": workflow_status,
"completionTime": completion_time or end_time,
"usedMaterials": used_materials or []
}
return self._post_report("/report/order_finish", data)
# 2.5 批量查询实验报告(用于轮询是否完成)
def order_list(self,
status: Optional[str] = None,
begin_time: Optional[str] = None,
end_time: Optional[str] = None,
filter_text: Optional[str] = None,
skip: int = 0, page: int = 10) -> Dict[str, Any]:
data: Dict[str, Any] = {"skipCount": skip, "pageCount": page}
if status is not None: # 80 成功 / 90 失败 / 100 执行中
data["status"] = status
if begin_time:
data["timeType"] = "CreationTime"
data["beginTime"] = begin_time
if end_time:
data["endTime"] = end_time
if filter_text:
data["filter"] = filter_text
return self._post_lims("/api/lims/order/order-list", data)
# 2.6 实验报告查询根据任务ID拿详情
def order_report(self, order_id: str) -> Dict[str, Any]:
return self._post_lims("/api/lims/order/order-report", order_id)
# 2.32 3-2-1 物料转运
def transfer_3_to_2_to_1(self,
# source_wh_id: Optional[str] = None,
source_wh_id: Optional[str] = '3a19debc-84b4-0359-e2d4-b3beea49348b',
source_x: int = 1, source_y: int = 1, source_z: int = 1) -> Dict[str, Any]:
payload: Dict[str, Any] = {
"sourcePosX": source_x, "sourcePosY": source_y, "sourcePosZ": source_z
}
if source_wh_id:
payload["sourceWHID"] = source_wh_id
return self._post_lims("/api/lims/order/transfer-task3To2To1", payload)
# 2.28 样品/废料取出
def take_out(self,
order_id: str,
preintake_ids: Optional[List[str]] = None,
material_ids: Optional[List[str]] = None) -> Dict[str, Any]:
data = {
"orderId": order_id,
"preintakeIds": preintake_ids or [],
"materialIds": material_ids or []
}
return self._post_lims("/api/lims/order/take-out", data)
# --------可选占位方法文档未定义的“1号站内部流程 / 1-2转运”--------
def start_station1_internal_flow(self, **kwargs) -> None:
logger.info("启动1号站内部流程占位按现场系统填充具体指令")
# 3.x 1→2 物料转运
def transfer_1_to_2(self) -> Dict[str, Any]:
"""
1→2 物料转运
URL: /api/lims/order/transfer-task1To2
只需要 apiKey 和 requestTime
"""
return self._post_lims("/api/lims/order/transfer-task1To2")
# -------------------- 整体编排 --------------------
def run_full_workflow(self,
inbound_items: List[Dict[str, str]],
orders: List[Dict[str, Any]],
poll_filter_code: Optional[str] = None,
poll_timeout_s: int = 600,
poll_interval_s: int = 5,
transfer_source: Optional[Dict[str, Any]] = None,
takeout_order_id: Optional[str] = None) -> None:
"""
一键串联:
1) 入库 3-4 个物料 → 2) 新建实验 → 3) 启动调度
运行中如需4) 物料变更推送 5) 步骤完成推送 6) 订单完成推送
完成后查询实验2.5/2.6)→ 7) 3-2-1 转运 → 8) 1号站内部流程
→ 9) 1-2 转运 → 10) 样品/废料取出
"""
# 1. 入库多于1个就用批量接口 2.18
if len(inbound_items) == 1:
r = self.storage_inbound(inbound_items[0]["materialId"], inbound_items[0]["locationId"])
logger.info(f"单个入库结果: {r}")
else:
r = self.storage_batch_inbound(inbound_items)
logger.info(f"批量入库结果: {r}")
# 2. 新建实验2.14
r = self.create_orders(orders)
logger.info(f"新建实验结果: {r}")
# 3. 启动调度2.7
r = self.scheduler_start()
logger.info(f"启动调度结果: {r}")
# —— 运行中各类推送2.24 / 2.21 / 2.23),通常由实际任务驱动,这里提供调用方式 —— #
# self.report_material_change({...})
# self.report_step_finish(order_code="BSO...", order_name="配液分液", step_name="xxx", step_id="...", sample_id="...",
# start_time=_iso_utc_now_ms(), end_time=_iso_utc_now_ms(), execution_status="completed")
# self.report_order_finish(order_code="BSO...", order_name="配液分液", start_time="...", end_time=_iso_utc_now_ms())
# 完成后才能转运:用 2.5 批量查询配合 filter=任务编码 轮询到 status=80成功
if poll_filter_code:
import time
deadline = time.time() + poll_timeout_s
while time.time() < deadline:
res = self.order_list(status="80", filter_text=poll_filter_code, page=5)
if isinstance(res, dict) and res.get("data", {}).get("items"):
logger.info(f"实验 {poll_filter_code} 已完成:{res['data']['items'][0]}")
break
time.sleep(poll_interval_s)
else:
logger.warning(f"等待实验 {poll_filter_code} 完成超时(未到 status=80")
# 7. 启动 3-2-1 转运2.32
if transfer_source:
r = self.transfer_3_to_2_to_1(
source_wh_id=transfer_source.get("sourceWHID"),
source_x=transfer_source.get("sourcePosX", 1),
source_y=transfer_source.get("sourcePosY", 1),
source_z=transfer_source.get("sourcePosZ", 1),
)
logger.info(f"3-2-1 转运结果: {r}")
# 8. 1号站内部流程占位
self.start_station1_internal_flow()
# 9. 1→2 转运(占位)
self.transfer_1_to_2()
# 10. 样品/废料取出2.28
if takeout_order_id:
r = self.take_out(order_id=takeout_order_id)
logger.info(f"样品/废料取出结果: {r}")
# 2.5 批量查询实验报告
def order_list_v2(self,
timeType: str = "string",
beginTime: str = "",
endTime: str = "",
status: str = "",
filter: str = "物料转移任务",
skipCount: int = 0,
pageCount: int = 1,
sorting: str = "") -> Dict[str, Any]:
"""
批量查询实验报告的详细信息 (2.5)
URL: /api/lims/order/order-list
参数默认值和接口文档保持一致
"""
data: Dict[str, Any] = {
"timeType": timeType,
"beginTime": beginTime,
"endTime": endTime,
"status": status,
"filter": filter,
"skipCount": skipCount,
"pageCount": pageCount,
"sorting": sorting
}
return self._post_lims("/api/lims/order/order-list", data)
def wait_for_transfer_task(self, timeout: int = 600, interval: int = 3) -> bool:
"""
轮询查询物料转移任务是否成功完成 (status=80)
- timeout: 最大等待秒数 (默认600秒)
- interval: 轮询间隔秒数 (默认3秒)
返回 True 表示找到并成功完成False 表示超时未找到
"""
now = datetime.now()
beginTime = now.strftime("%Y-%m-%dT%H:%M:%SZ")
endTime = (now + timedelta(minutes=5)).strftime("%Y-%m-%dT%H:%M:%SZ")
print(beginTime, endTime)
deadline = time.time() + timeout
while time.time() < deadline:
result = self.order_list_v2(
timeType="string",
beginTime=beginTime,
endTime=endTime,
status="",
filter="物料转移任务",
skipCount=0,
pageCount=1,
sorting=""
)
print(result)
items = result.get("data", {}).get("items", [])
for item in items:
name = item.get("name", "")
status = item.get("status")
if name.startswith("物料转移任务") and status == 80:
logger.info(f"硬件转移动作完成: {name}")
return True
time.sleep(interval)
logger.warning("超时未找到成功的物料转移任务")
return False
# --------------------------------
if __name__ == "__main__":
ws = BioyondWorkstation()
# ws.scheduler_stop()
ws.scheduler_start()
logger.info("调度启动完成")
# ws.scheduler_continue()
# 3.30 上料:读取模板 Excel 自动解析并 POST
r1 = ws.auto_feeding4to3_from_xlsx(r"C:\ML\GitHub\Uni-Lab-OS\unilabos\devices\workstation\bioyond_cell\样品导入模板 (8).xlsx")
ws.wait_for_transfer_task()
logger.info("4号箱向3号箱转运物料转移任务已完成")
# ws.scheduler_start()
# print(r1["payload"]["data"]) # 调试模式下可直接看到要发的 JSON items
# 新建实验
res = ws.create_orders("C:/ML/GitHub/Uni-Lab-OS/unilabos/devices/workstation/bioyond_cell/2025092501.xlsx")
# ws.scheduler_start()
# print(res)
#1号站启动
ws.transfer_1_to_2()
ws.wait_for_transfer_task()
logger.info("1号站向2号站转移任务完成")
logger.info("全流程结束")
# 3.31 下料:同理
# r2 = ws.auto_batch_outbound_from_xlsx(r"C:/path/样品导入模板 (8).xlsx")
# print(r2["payload"]["data"])

View File

@@ -1,8 +1,23 @@
{
"nodes": [
{
"id": "bioyond_cell_workstation",
"name": "配液分液工站",
"children": [
],
"parent": null,
"type": "device",
"class": "bioyond_cell",
"config": {
"protocol_type": [],
"station_resource": {}
},
"data": {}
},
{
"id": "BatteryStation",
"name": "扣电工作站",
"name": "扣电组装工作站",
"children": [
"coin_cell_deck"
],

View File

@@ -0,0 +1,7 @@
material_name
LiPF6
LiDFOB
DTD
LiFSI
LiPO2F2
1 material_name
2 LiPF6
3 LiDFOB
4 DTD
5 LiFSI
6 LiPO2F2

File diff suppressed because it is too large Load Diff

View File

@@ -2,128 +2,248 @@
"""
配置文件 - 包含所有配置信息和映射关系
"""
import os
# API配置
# ==================== API 基础配置 ====================
# BioyondCellWorkstation 默认配置(包含所有必需参数)
API_CONFIG = {
"api_key": "",
"api_host": ""
}
# 站点类型配置
STATION_TYPES = {
"REACTION": "reaction_station", # 仅反应站
"DISPENSING": "dispensing_station", # 仅配液站
"HYBRID": "hybrid_station" # 混合模式
}
# 默认站点配置
DEFAULT_STATION_CONFIG = {
"station_type": STATION_TYPES["REACTION"], # 默认反应站模式
"enable_reaction_station": True, # 是否启用反应站功能
"enable_dispensing_station": False, # 是否启用配液站功能
"station_name": "BioyondReactionStation", # 站点名称
"description": "Bioyond反应工作站" # 站点描述
}
# 工作流映射配置
WORKFLOW_MAPPINGS = {
"reactor_taken_out": "",
"reactor_taken_in": "",
"Solid_feeding_vials": "",
"Liquid_feeding_vials(non-titration)": "",
"Liquid_feeding_solvents": "",
"Liquid_feeding(titration)": "",
"liquid_feeding_beaker": "",
"Drip_back": "",
}
# 工作流名称到DisplaySectionName的映射
WORKFLOW_TO_SECTION_MAP = {
'reactor_taken_in': '反应器放入',
'liquid_feeding_beaker': '液体投料-烧杯',
'Liquid_feeding_vials(non-titration)': '液体投料-小瓶(非滴定)',
'Liquid_feeding_solvents': '液体投料-溶剂',
'Solid_feeding_vials': '固体投料-小瓶',
'Liquid_feeding(titration)': '液体投料-滴定',
'reactor_taken_out': '反应器取出'
# API 连接配置
# "api_host": os.getenv("BIOYOND_API_HOST", "http://172.21.32.65:44389"),#实机
"api_host": os.getenv("BIOYOND_API_HOST", "http://172.16.10.169:44388"),# 仿真机
"api_key": os.getenv("BIOYOND_API_KEY", "8A819E5C"),
"timeout": int(os.getenv("BIOYOND_TIMEOUT", "30")),
# 报送配置
"report_token": os.getenv("BIOYOND_REPORT_TOKEN", "CHANGE_ME_TOKEN"),
# HTTP 服务配置
"HTTP_host": os.getenv("BIOYOND_HTTP_HOST", "172.21.32.83"), # HTTP服务监听地址监听计算机飞连ip地址
"HTTP_port": int(os.getenv("BIOYOND_HTTP_PORT", "8080")),
"debug_mode": False,# 调试模式
}
# 库位映射配置
LOCATION_MAPPING = {
'A01': '',
'A02': '',
'A03': '',
'A04': '',
'A05': '',
'A06': '',
'A07': '',
'A08': '',
'B01': '',
'B02': '',
'B03': '',
'B04': '',
'B05': '',
'B06': '',
'B07': '',
'B08': '',
'C01': '',
'C02': '',
'C03': '',
'C04': '',
'C05': '',
'C06': '',
'C07': '',
'C08': '',
'D01': '',
'D02': '',
'D03': '',
'D04': '',
'D05': '',
'D06': '',
'D07': '',
'D08': '',
WAREHOUSE_MAPPING = {
"粉末加样头堆栈": {
"uuid": "",
"site_uuids": {
"A01": "3a19da56-1379-ff7c-1745-07e200b44ce2",
"B01": "3a19da56-1379-2424-d751-fe6e94cef938",
"C01": "3a19da56-1379-271c-03e3-6bdb590e395e",
"D01": "3a19da56-1379-277f-2b1b-0d11f7cf92c6",
"E01": "3a19da56-1379-2f1c-a15b-e01db90eb39a",
"F01": "3a19da56-1379-3fa1-846b-088158ac0b3d",
"G01": "3a19da56-1379-5aeb-d0cd-d3b4609d66e1",
"H01": "3a19da56-1379-6077-8258-bdc036870b78",
"I01": "3a19da56-1379-863b-a120-f606baf04617",
"J01": "3a19da56-1379-8a74-74e5-35a9b41d4fd5",
"K01": "3a19da56-1379-b270-b7af-f18773918abe",
"L01": "3a19da56-1379-ba54-6d78-fd770a671ffc",
"M01": "3a19da56-1379-c22d-c96f-0ceb5eb54a04",
"N01": "3a19da56-1379-d64e-c6c5-c72ea4829888",
"O01": "3a19da56-1379-d887-1a3c-6f9cce90f90e",
"P01": "3a19da56-1379-e77d-0e65-7463b238a3b9",
"Q01": "3a19da56-1379-edf6-1472-802ddb628774",
"R01": "3a19da56-1379-f281-0273-e0ef78f0fd97",
"S01": "3a19da56-1379-f924-7f68-df1fa51489f4",
"T01": "3a19da56-1379-ff7c-1745-07e200b44ce2"
}
},
"配液站内试剂仓库": {
"uuid": "",
"site_uuids": {
"A01": "3a19da43-57b5-294f-d663-154a1cc32270",
"B01": "3a19da43-57b5-7394-5f49-54efe2c9bef2",
"C01": "3a19da43-57b5-5e75-552f-8dbd0ad1075f",
"A02": "3a19da43-57b5-8441-db94-b4d3875a4b6c",
"B02": "3a19da43-57b5-3e41-c181-5119dddaf50c",
"C02": "3a19da43-57b5-269b-282d-fba61fe8ce96",
"A03": "3a19da43-57b5-7c1e-d02e-c40e8c33f8a1",
"B03": "3a19da43-57b5-659f-621f-1dcf3f640363",
"C03": "3a19da43-57b5-855a-6e71-f398e376dee1",
}
},
"试剂替换仓库": {
"uuid": "",
"site_uuids": {
"A01": "3a19da51-8f4e-30f3-ea08-4f8498e9b097",
"B01": "3a19da51-8f4e-1da7-beb0-80a4a01e67a8",
"C01": "3a19da51-8f4e-337d-2675-bfac46880b06",
"D01": "3a19da51-8f4e-e514-b92c-9c44dc5e489d",
"E01": "3a19da51-8f4e-22d1-dd5b-9774ddc80402",
"F01": "3a19da51-8f4e-273a-4871-dff41c29bfd9",
"G01": "3a19da51-8f4e-b32f-454f-74bc1a665653",
"H01": "3a19da51-8f4e-8c93-68c9-0b4382320f59",
"I01": "3a19da51-8f4e-360c-0149-291b47c6089b",
"J01": "3a19da51-8f4e-4152-9bca-8d64df8c1af0"
}
},
"自动堆栈-左": {
"uuid": "",
"site_uuids": {
"A01": "3a19debc-84b5-4c1c-d3a1-26830cf273ff",
"A02": "3a19debc-84b5-033b-b31f-6b87f7c2bf52",
"B01": "3a19debc-84b5-3924-172f-719ab01b125c",
"B02": "3a19debc-84b5-aad8-70c6-b8c6bb2d8750"
}
},
"自动堆栈-右": {
"uuid": "",
"site_uuids": {
"A01": "3a19debe-5200-7df2-1dd9-7d202f158864",
"A02": "3a19debe-5200-573b-6120-8b51f50e1e50",
"B01": "3a19debe-5200-7cd8-7666-851b0a97e309",
"B02": "3a19debe-5200-e6d3-96a3-baa6e3d5e484"
}
},
"手动堆栈": {
"uuid": "",
"site_uuids": {
"A01": "3a19deae-2c7a-36f5-5e41-02c5b66feaea",
"A02": "3a19deae-2c7a-dc6d-c41e-ef285d946cfe",
"A03": "3a19deae-2c7a-5876-c454-6b7e224ca927",
"B01": "3a19deae-2c7a-2426-6d71-e9de3cb158b1",
"B02": "3a19deae-2c7a-79b0-5e44-efaafd1e4cf3",
"B03": "3a19deae-2c7a-b9eb-f4e3-e308e0cf839a",
"C01": "3a19deae-2c7a-32bc-768e-556647e292f3",
"C02": "3a19deae-2c7a-e97a-8484-f5a4599447c4",
"C03": "3a19deae-2c7a-3056-6504-10dc73fbc276",
"D01": "3a19deae-2c7a-ffad-875e-8c4cda61d440",
"D02": "3a19deae-2c7a-61be-601c-b6fb5610499a",
"D03": "3a19deae-2c7a-c0f7-05a7-e3fe2491e560",
"E01": "3a19deae-2c7a-a6f4-edd1-b436a7576363",
"E02": "3a19deae-2c7a-4367-96dd-1ca2186f4910",
"E03": "3a19deae-2c7a-b163-2219-23df15200311",
"F01": "3a19deae-2c7a-d594-fd6a-0d20de3c7c4a",
"F02": "3a19deae-2c7a-a194-ea63-8b342b8d8679",
"F03": "3a19deae-2c7a-f7c4-12bd-425799425698",
"G01": "3a19deae-2c7a-0b56-72f1-8ab86e53b955",
"G02": "3a19deae-2c7a-204e-95ed-1f1950f28343",
"G03": "3a19deae-2c7a-392b-62f1-4907c66343f8",
"H01": "3a19deae-2c7a-5602-e876-d27aca4e3201",
"H02": "3a19deae-2c7a-f15c-70e0-25b58a8c9702",
"H03": "3a19deae-2c7a-780b-8965-2e1345f7e834",
"I01": "3a19deae-2c7a-8849-e172-07de14ede928",
"I02": "3a19deae-2c7a-4772-a37f-ff99270bafc0",
"I03": "3a19deae-2c7a-cce7-6e4a-25ea4a2068c4",
"J01": "3a19deae-2c7a-1848-de92-b5d5ed054cc6",
"J02": "3a19deae-2c7a-1d45-b4f8-6f866530e205",
"J03": "3a19deae-2c7a-f237-89d9-8fe19025dee9"
}
},
"4号手套箱内部堆栈": {
"uuid": "",
"site_uuids": {
"A01": "3a1baa20-a7b1-c665-8b9c-d8099d07d2f6",
"A02": "3a1baa20-a7b1-93a7-c988-f9c8ad6c58c9",
"A03": "3a1baa20-a7b1-00ee-f751-da9b20b6c464",
"A04": "3a1baa20-a7b1-4712-c37b-0b5b658ef7b9",
"B01": "3a1baa20-a7b1-9847-fc9c-96d604cd1a8e",
"B02": "3a1baa20-a7b1-4ae9-e604-0601db06249c",
"B03": "3a1baa20-a7b1-8329-ea75-81ca559d9ce1",
"B04": "3a1baa20-a7b1-89c5-d96f-36e98a8f7268",
"C01": "3a1baa20-a7b1-32ec-39e6-8044733839d6",
"C02": "3a1baa20-a7b1-b573-e426-4c86040348b2",
"C03": "3a1baa20-a7b1-cca7-781e-0522b729bf5d",
"C04": "3a1baa20-a7b1-7c98-5fd9-5855355ae4b3"
}
}
}
# 物料类型配置
MATERIAL_TYPE_IDS = {
"样品板": "",
"样品": "",
"烧杯": ""
}
MATERIAL_TYPE_MAPPINGS = {
"烧杯": "BIOYOND_PolymerStation_1FlaskCarrier",
"试剂瓶": "BIOYOND_PolymerStation_1BottleCarrier",
"样品板": "BIOYOND_PolymerStation_6VialCarrier",
"100ml液体": ("YB_1Bottle100mlCarrier", "d37166b3-ecaa-481e-bd84-3032b795ba07"),
"": ("YB_1BottleCarrier", "3a190ca1-2add-2b23-f8e1-bbd348b7f790"),
"高粘液": ("YB_1GaoNianYeBottleCarrier", "abe8df30-563d-43d2-85e0-cabec59ddc16"),
"加样头(大)": ("YB_jia_yang_tou_da", "3a190ca0-b2f6-9aeb-8067-547e72c11469"),
"加样头(大)板": ("YB_jia_yang_tou_da_1X1_carrier", "a8e714ae-2a4e-4eb9-9614-e4c140ec3f16"),
"5ml分液瓶板": ("YB_6x5ml_DispensingVialCarrier", "3a192fa4-007d-ec7b-456e-2a8be7a13f23"),
"5ml分液瓶": ("YB_fen_ye_5ml_Bottle", "3a192c2a-ebb7-58a1-480d-8b3863bf74f4"),
"20ml分液瓶板": ("YB_6x20ml_DispensingVialCarrier", "3a192fa4-47db-3449-162a-eaf8aba57e27"),
"20ml分液瓶": ("YB_fen_ye_20ml_Bottle", "3a192c2b-19e8-f0a3-035e-041ca8ca1035"),
"配液瓶(小)板": ("YB_6x_SmallSolutionBottleCarrier", "3a190c8b-3284-af78-d29f-9a69463ad047"),
"配液瓶(小)": ("YB_pei_ye_xiao_Bottle", "3a190c8c-fe8f-bf48-0dc3-97afc7f508eb"),
"配液瓶(大)板": ("YB_4x_LargeSolutionBottleCarrier", "53e50377-32dc-4781-b3c0-5ce45bc7dc27"),
"配液瓶(大)": ("YB_pei_ye_da_Bottle", "19c52ad1-51c5-494f-8854-576f4ca9c6ca"),
"适配器块": ("YB_AdapterBlock", "efc3bb32-d504-4890-91c0-b64ed3ac80cf"),
"枪头盒": ("YB_TipBox", "3a192c2e-20f3-a44a-0334-c8301839d0b3"),
"枪头": ("YB_Pipette_Tip", "b6196971-1050-46da-9927-333e8dea062d"),
}
# 步骤参数配置各工作流的步骤UUID
WORKFLOW_STEP_IDS = {
"reactor_taken_in": {
"config": ""
SOLID_LIQUID_MAPPINGS = {
# 固体
"LiDFOB": {
"typeId": "3a190ca0-b2f6-9aeb-8067-547e72c11469",
"code": "",
"barCode": "",
"name": "LiDFOB",
"unit": "g",
"parameters": "",
"quantity": "2",
"warningQuantity": "1",
"details": []
},
"liquid_feeding_beaker": {
"liquid": "",
"observe": ""
},
"liquid_feeding_vials_non_titration": {
"liquid": "",
"observe": ""
},
"liquid_feeding_solvents": {
"liquid": "",
"observe": ""
},
"solid_feeding_vials": {
"feeding": "",
"observe": ""
},
"liquid_feeding_titration": {
"liquid": "",
"observe": ""
},
"drip_back": {
"liquid": "",
"observe": ""
}
# "LiPF6": {
# "typeId": "3a190ca0-b2f6-9aeb-8067-547e72c11469",
# "code": "",
# "barCode": "",
# "name": "LiPF6",
# "unit": "g",
# "parameters": "",
# "quantity": 2,
# "warningQuantity": 1,
# "details": []
# },
# "LiFSI": {
# "typeId": "3a190ca0-b2f6-9aeb-8067-547e72c11469",
# "code": "",
# "barCode": "",
# "name": "LiFSI",
# "unit": "g",
# "parameters": "",
# "quantity": 2,
# "warningQuantity": 1,
# "details": []
# },
# "DTC": {
# "typeId": "3a190ca0-b2f6-9aeb-8067-547e72c11469",
# "code": "",
# "barCode": "",
# "name": "DTC",
# "unit": "g",
# "parameters": "",
# "quantity": 2,
# "warningQuantity": 1,
# "details": []
# },
# "LiPO2F2": {
# "typeId": "3a190ca0-b2f6-9aeb-8067-547e72c11469",
# "code": "",
# "barCode": "",
# "name": "LiPO2F2",
# "unit": "g",
# "parameters": "",
# "quantity": 2,
# "warningQuantity": 1,
# "details": []
# },
# 液体
# "SA": ("BIOYOND_PolymerStation_Solid_Stock", "3a190ca0-b2f6-9aeb-8067-547e72c11469"),
# "EC": ("BIOYOND_PolymerStation_Solid_Stock", "3a190ca0-b2f6-9aeb-8067-547e72c11469"),
# "VC": ("BIOYOND_PolymerStation_Solid_Stock", "3a190ca0-b2f6-9aeb-8067-547e72c11469"),
# "AND": ("BIOYOND_PolymerStation_Solid_Stock", "3a190ca0-b2f6-9aeb-8067-547e72c11469"),
# "HTCN": ("BIOYOND_PolymerStation_Solid_Stock", "3a190ca0-b2f6-9aeb-8067-547e72c11469"),
# "DENE": ("BIOYOND_PolymerStation_Solid_Stock", "3a190ca0-b2f6-9aeb-8067-547e72c11469"),
# "TMSP": ("BIOYOND_PolymerStation_Solid_Stock", "3a190ca0-b2f6-9aeb-8067-547e72c11469"),
# "TMSB": ("BIOYOND_PolymerStation_Solid_Stock", "3a190ca0-b2f6-9aeb-8067-547e72c11469"),
# "EP": ("BIOYOND_PolymerStation_Solid_Stock", "3a190ca0-b2f6-9aeb-8067-547e72c11469"),
# "DEC": ("BIOYOND_PolymerStation_Solid_Stock", "3a190ca0-b2f6-9aeb-8067-547e72c11469"),
# "EMC": ("BIOYOND_PolymerStation_Solid_Stock", "3a190ca0-b2f6-9aeb-8067-547e72c11469"),
# "SN": ("BIOYOND_PolymerStation_Solid_Stock", "3a190ca0-b2f6-9aeb-8067-547e72c11469"),
# "DMC": ("BIOYOND_PolymerStation_Solid_Stock", "3a190ca0-b2f6-9aeb-8067-547e72c11469"),
# "FEC": ("BIOYOND_PolymerStation_Solid_Stock", "3a190ca0-b2f6-9aeb-8067-547e72c11469"),
}
WORKFLOW_MAPPINGS = {}
LOCATION_MAPPING = {}

File diff suppressed because it is too large Load Diff

View File

@@ -1,203 +1,205 @@
# experiment_workflow.py
"""
实验流程主程序
"""
import json
from bioyond_rpc import BioyondV1RPC
from config import API_CONFIG, WORKFLOW_MAPPINGS
from unilabos.devices.workstation.bioyond_studio.reaction_station import BioyondReactionStation
from unilabos.devices.workstation.bioyond_studio.config import API_CONFIG, WORKFLOW_MAPPINGS, DECK_CONFIG, MATERIAL_TYPE_MAPPINGS
def run_experiment():
"""运行实验流程"""
# 初始化Bioyond客户端
config = {
**API_CONFIG,
"workflow_mappings": WORKFLOW_MAPPINGS
"workflow_mappings": WORKFLOW_MAPPINGS,
"material_type_mappings": MATERIAL_TYPE_MAPPINGS
}
Bioyond = BioyondV1RPC(config)
# 创建BioyondReactionStation实例传入deck配置
Bioyond = BioyondReactionStation(
config=config,
deck=DECK_CONFIG
)
print("\n============= 多工作流参数测试(简化接口+材料缓存)=============")
# 显示可用的材料名称前20个
available_materials = Bioyond.get_available_materials()
available_materials = Bioyond.hardware_interface.get_available_materials()
print(f"可用材料名称前20个: {available_materials[:20]}")
print(f"总共有 {len(available_materials)} 个材料可用\n")
# 1. 反应器放入
print("1. 添加反应器放入工作流,带参数...")
Bioyond.reactor_taken_in(
assign_material_name="BTDA-DD",
cutoff="10000",
assign_material_name="BTDA-DD",
cutoff="10000",
temperature="-10"
)
# 2. 液体投料-烧杯 (第一个)
print("2. 添加液体投料-烧杯,带参数...")
Bioyond.liquid_feeding_beaker(
volume="34768.7",
volume="34768.7",
assign_material_name="ODA",
time="0",
torque_variation="1",
titrationType="1",
time="0",
torque_variation="1",
titration_type="1",
temperature=-10
)
# 3. 液体投料-烧杯 (第二个)
print("3. 添加液体投料-烧杯,带参数...")
Bioyond.liquid_feeding_beaker(
volume="34080.9",
volume="34080.9",
assign_material_name="MPDA",
time="5",
torque_variation="2",
titrationType="1",
time="5",
torque_variation="2",
titration_type="1",
temperature=0
)
# 4. 液体投料-小瓶非滴定
print("4. 添加液体投料-小瓶非滴定,带参数...")
Bioyond.liquid_feeding_vials_non_titration(
volumeFormula="639.5",
assign_material_name="SIDA",
titration_type="1",
time="0",
torque_variation="1",
volume_formula="639.5",
assign_material_name="SIDA",
titration_type="1",
time="0",
torque_variation="1",
temperature=-10
)
# 5. 液体投料溶剂
print("5. 添加液体投料溶剂,带参数...")
Bioyond.liquid_feeding_solvents(
assign_material_name="NMP",
volume="19000",
titration_type="1",
time="5",
torque_variation="2",
volume="19000",
titration_type="1",
time="5",
torque_variation="2",
temperature=-10
)
# 6-8. 固体进料小瓶 (三个)
print("6. 添加固体进料小瓶,带参数...")
Bioyond.solid_feeding_vials(
material_id="3",
time="180",
material_id="3",
time="180",
torque_variation="2",
assign_material_name="BTDA-1",
assign_material_name="BTDA1",
temperature=-10.00
)
print("7. 添加固体进料小瓶,带参数...")
Bioyond.solid_feeding_vials(
material_id="3",
time="180",
material_id="3",
time="180",
torque_variation="2",
assign_material_name="BTDA-2",
assign_material_name="BTDA2",
temperature=25.00
)
print("8. 添加固体进料小瓶,带参数...")
Bioyond.solid_feeding_vials(
material_id="3",
time="480",
material_id="3",
time="480",
torque_variation="2",
assign_material_name="BTDA-3",
assign_material_name="BTDA3",
temperature=25.00
)
# 液体投料滴定(第一个)
print("9. 添加液体投料滴定,带参数...") # ODPA
Bioyond.liquid_feeding_titration(
volume_formula="1000",
volume_formula="{{6-0-5}}+{{7-0-5}}+{{8-0-5}}",
assign_material_name="BTDA-DD",
titration_type="1",
time="360",
torque_variation="2",
titration_type="1",
time="360",
torque_variation="2",
temperature="25.00"
)
# 液体投料滴定(第二个)
print("10. 添加液体投料滴定,带参数...") # ODPA
Bioyond.liquid_feeding_titration(
volume_formula="500",
volume_formula="500",
assign_material_name="BTDA-DD",
titration_type="1",
time="360",
torque_variation="2",
titration_type="1",
time="360",
torque_variation="2",
temperature="25.00"
)
# 液体投料滴定(第三个)
print("11. 添加液体投料滴定,带参数...") # ODPA
Bioyond.liquid_feeding_titration(
volume_formula="500",
volume_formula="500",
assign_material_name="BTDA-DD",
titration_type="1",
time="360",
torque_variation="2",
titration_type="1",
time="360",
torque_variation="2",
temperature="25.00"
)
print("12. 添加液体投料滴定,带参数...") # ODPA
Bioyond.liquid_feeding_titration(
volume_formula="500",
volume_formula="500",
assign_material_name="BTDA-DD",
titration_type="1",
time="360",
torque_variation="2",
titration_type="1",
time="360",
torque_variation="2",
temperature="25.00"
)
print("13. 添加液体投料滴定,带参数...") # ODPA
Bioyond.liquid_feeding_titration(
volume_formula="500",
volume_formula="500",
assign_material_name="BTDA-DD",
titration_type="1",
time="360",
torque_variation="2",
titration_type="1",
time="360",
torque_variation="2",
temperature="25.00"
)
print("14. 添加液体投料滴定,带参数...") # ODPA
Bioyond.liquid_feeding_titration(
volume_formula="500",
volume_formula="500",
assign_material_name="BTDA-DD",
titration_type="1",
time="360",
torque_variation="2",
titration_type="1",
time="360",
torque_variation="2",
temperature="25.00"
)
print("15. 添加液体投料溶剂,带参数...")
Bioyond.liquid_feeding_solvents(
assign_material_name="PGME",
volume="16894.6",
titration_type="1",
time="360",
torque_variation="2",
volume="16894.6",
titration_type="1",
time="360",
torque_variation="2",
temperature=25.00
)
# 16. 反应器取出
print("16. 添加反应器取出工作流...")
Bioyond.reactor_taken_out()
# 显示当前工作流序列
sequence = Bioyond.get_workflow_sequence()
print("\n当前工作流执行顺序:")
print(sequence)
# 执行process_and_execute_workflow合并工作流并创建任务
print("\n4. 执行process_and_execute_workflow...")
result = Bioyond.process_and_execute_workflow(
workflow_name="test3_86",
task_name="实验3_86"
workflow_name="test3",
task_name="实验3"
)
# 显示执行结果
print("\n5. 执行结果:")
if isinstance(result, str):
@@ -205,9 +207,9 @@ def run_experiment():
result_dict = json.loads(result)
if result_dict.get("success"):
print("任务创建成功!")
print(f"- 工作流: {result_dict.get('workflow', {}).get('name')}")
print(f"- 工作流ID: {result_dict.get('workflow', {}).get('id')}")
print(f"- 任务结果: {result_dict.get('task')}")
# print(f"- 工作流: {result_dict.get('workflow', {}).get('name')}")
# print(f"- 工作流ID: {result_dict.get('workflow', {}).get('id')}")
# print(f"- 任务结果: {result_dict.get('task')}")
else:
print(f"任务创建失败: {result_dict.get('error')}")
except:
@@ -220,179 +222,179 @@ def run_experiment():
print(f"- 任务结果: {result.get('task')}")
else:
print(f"任务创建失败: {result.get('error')}")
# 可选:启动调度器
# Bioyond.scheduler_start()
return Bioyond
def prepare_materials(bioyond):
"""准备实验材料(可选)"""
# 样品板材料数据定义
material_data_yp_1 = {
"typeId": "3a142339-80de-8f25-6093-1b1b1b6c322e",
"name": "样品板-1",
"unit": "",
"quantity": 1,
"details": [
{
"typeId": "3a14233a-84a3-088d-6676-7cb4acd57c64",
"name": "BPDA-DD-1",
"quantity": 1,
"x": 1,
"y": 1,
"Parameters": "{\"molecular\": 1}"
},
{
"typeId": "3a14233a-84a3-088d-6676-7cb4acd57c64",
"name": "PEPA",
"quantity": 1,
"x": 1,
"y": 2,
"Parameters": "{\"molecular\": 1}"
},
{
"typeId": "3a14233a-84a3-088d-6676-7cb4acd57c64",
"name": "BPDA-DD-2",
"quantity": 1,
"x": 1,
"y": 3,
"Parameters": "{\"molecular\": 1}"
},
{
"typeId": "3a14233a-84a3-088d-6676-7cb4acd57c64",
"name": "BPDA-1",
"quantity": 1,
"x": 2,
"y": 1,
"Parameters": "{\"molecular\": 1}"
},
{
"typeId": "3a14233a-84a3-088d-6676-7cb4acd57c64",
"name": "PMDA",
"quantity": 1,
"x": 2,
"y": 2,
"Parameters": "{\"molecular\": 1}"
},
{
"typeId": "3a14233a-84a3-088d-6676-7cb4acd57c64",
"name": "BPDA-2",
"quantity": 1,
"x": 2,
"y": 3,
"Parameters": "{\"molecular\": 1}"
}
],
"Parameters": "{}"
}
material_data_yp_2 = {
"typeId": "3a142339-80de-8f25-6093-1b1b1b6c322e",
"name": "样品板-2",
"unit": "",
"quantity": 1,
"details": [
{
"typeId": "3a14233a-84a3-088d-6676-7cb4acd57c64",
"name": "BPDA-DD",
"quantity": 1,
"x": 1,
"y": 1,
"Parameters": "{\"molecular\": 1}"
},
{
"typeId": "3a14233a-84a3-088d-6676-7cb4acd57c64",
"name": "SIDA",
"quantity": 1,
"x": 1,
"y": 2,
"Parameters": "{\"molecular\": 1}"
},
{
"typeId": "3a14233a-84a3-088d-6676-7cb4acd57c64",
"name": "BTDA-1",
"quantity": 1,
"x": 2,
"y": 1,
"Parameters": "{\"molecular\": 1}"
},
{
"typeId": "3a14233a-84a3-088d-6676-7cb4acd57c64",
"name": "BTDA-2",
"quantity": 1,
"x": 2,
"y": 2,
"Parameters": "{\"molecular\": 1}"
},
{
"typeId": "3a14233a-84a3-088d-6676-7cb4acd57c64",
"name": "BTDA-3",
"quantity": 1,
"x": 2,
"y": 3,
"Parameters": "{\"molecular\": 1}"
}
],
"Parameters": "{}"
}
# 烧杯材料数据定义
beaker_materials = [
{
"typeId": "3a14233b-f0a9-ba84-eaa9-0d4718b361b6",
"name": "PDA-1",
"unit": "微升",
"quantity": 1,
"parameters": "{\"DeviceMaterialType\":\"NMP\"}"
},
{
"typeId": "3a14233b-f0a9-ba84-eaa9-0d4718b361b6",
"name": "TFDB",
"unit": "微升",
"quantity": 1,
"parameters": "{\"DeviceMaterialType\":\"NMP\"}"
},
{
"typeId": "3a14233b-f0a9-ba84-eaa9-0d4718b361b6",
"name": "ODA",
"unit": "微升",
"quantity": 1,
"parameters": "{\"DeviceMaterialType\":\"NMP\"}"
},
{
"typeId": "3a14233b-f0a9-ba84-eaa9-0d4718b361b6",
"name": "MPDA",
"unit": "微升",
"quantity": 1,
"parameters": "{\"DeviceMaterialType\":\"NMP\"}"
},
{
"typeId": "3a14233b-f0a9-ba84-eaa9-0d4718b361b6",
"name": "PDA-2",
"unit": "微升",
"quantity": 1,
"parameters": "{\"DeviceMaterialType\":\"NMP\"}"
}
]
# 如果需要可以在这里调用add_material方法添加材料
# 例如:
# result = bioyond.add_material(json.dumps(material_data_yp_1))
# print(f"添加材料结果: {result}")
return {
"sample_plates": [material_data_yp_1, material_data_yp_2],
"beakers": beaker_materials
}
# def prepare_materials(bioyond):
# """准备实验材料(可选)"""
# # 样品板材料数据定义
# material_data_yp_1 = {
# "typeId": "3a142339-80de-8f25-6093-1b1b1b6c322e",
# "name": "样品板-1",
# "unit": "个",
# "quantity": 1,
# "details": [
# {
# "typeId": "3a14233a-84a3-088d-6676-7cb4acd57c64",
# "name": "BPDA-DD-1",
# "quantity": 1,
# "x": 1,
# "y": 1,
# "Parameters": "{\"molecular\": 1}"
# },
# {
# "typeId": "3a14233a-84a3-088d-6676-7cb4acd57c64",
# "name": "PEPA",
# "quantity": 1,
# "x": 1,
# "y": 2,
# "Parameters": "{\"molecular\": 1}"
# },
# {
# "typeId": "3a14233a-84a3-088d-6676-7cb4acd57c64",
# "name": "BPDA-DD-2",
# "quantity": 1,
# "x": 1,
# "y": 3,
# "Parameters": "{\"molecular\": 1}"
# },
# {
# "typeId": "3a14233a-84a3-088d-6676-7cb4acd57c64",
# "name": "BPDA-1",
# "quantity": 1,
# "x": 2,
# "y": 1,
# "Parameters": "{\"molecular\": 1}"
# },
# {
# "typeId": "3a14233a-84a3-088d-6676-7cb4acd57c64",
# "name": "PMDA",
# "quantity": 1,
# "x": 2,
# "y": 2,
# "Parameters": "{\"molecular\": 1}"
# },
# {
# "typeId": "3a14233a-84a3-088d-6676-7cb4acd57c64",
# "name": "BPDA-2",
# "quantity": 1,
# "x": 2,
# "y": 3,
# "Parameters": "{\"molecular\": 1}"
# }
# ],
# "Parameters": "{}"
# }
# material_data_yp_2 = {
# "typeId": "3a142339-80de-8f25-6093-1b1b1b6c322e",
# "name": "样品板-2",
# "unit": "个",
# "quantity": 1,
# "details": [
# {
# "typeId": "3a14233a-84a3-088d-6676-7cb4acd57c64",
# "name": "BPDA-DD",
# "quantity": 1,
# "x": 1,
# "y": 1,
# "Parameters": "{\"molecular\": 1}"
# },
# {
# "typeId": "3a14233a-84a3-088d-6676-7cb4acd57c64",
# "name": "SIDA",
# "quantity": 1,
# "x": 1,
# "y": 2,
# "Parameters": "{\"molecular\": 1}"
# },
# {
# "typeId": "3a14233a-84a3-088d-6676-7cb4acd57c64",
# "name": "BTDA-1",
# "quantity": 1,
# "x": 2,
# "y": 1,
# "Parameters": "{\"molecular\": 1}"
# },
# {
# "typeId": "3a14233a-84a3-088d-6676-7cb4acd57c64",
# "name": "BTDA-2",
# "quantity": 1,
# "x": 2,
# "y": 2,
# "Parameters": "{\"molecular\": 1}"
# },
# {
# "typeId": "3a14233a-84a3-088d-6676-7cb4acd57c64",
# "name": "BTDA-3",
# "quantity": 1,
# "x": 2,
# "y": 3,
# "Parameters": "{\"molecular\": 1}"
# }
# ],
# "Parameters": "{}"
# }
# # 烧杯材料数据定义
# beaker_materials = [
# {
# "typeId": "3a14233b-f0a9-ba84-eaa9-0d4718b361b6",
# "name": "PDA-1",
# "unit": "微升",
# "quantity": 1,
# "parameters": "{\"DeviceMaterialType\":\"NMP\"}"
# },
# {
# "typeId": "3a14233b-f0a9-ba84-eaa9-0d4718b361b6",
# "name": "TFDB",
# "unit": "微升",
# "quantity": 1,
# "parameters": "{\"DeviceMaterialType\":\"NMP\"}"
# },
# {
# "typeId": "3a14233b-f0a9-ba84-eaa9-0d4718b361b6",
# "name": "ODA",
# "unit": "微升",
# "quantity": 1,
# "parameters": "{\"DeviceMaterialType\":\"NMP\"}"
# },
# {
# "typeId": "3a14233b-f0a9-ba84-eaa9-0d4718b361b6",
# "name": "MPDA",
# "unit": "微升",
# "quantity": 1,
# "parameters": "{\"DeviceMaterialType\":\"NMP\"}"
# },
# {
# "typeId": "3a14233b-f0a9-ba84-eaa9-0d4718b361b6",
# "name": "PDA-2",
# "unit": "微升",
# "quantity": 1,
# "parameters": "{\"DeviceMaterialType\":\"NMP\"}"
# }
# ]
# # 如果需要可以在这里调用add_material方法添加材料
# # 例如:
# # result = bioyond.add_material(json.dumps(material_data_yp_1))
# # print(f"添加材料结果: {result}")
# return {
# "sample_plates": [material_data_yp_1, material_data_yp_2],
# "beakers": beaker_materials
# }
if __name__ == "__main__":
# 运行主实验流程
bioyond_client = run_experiment()
# 可选:准备材料数据
# materials = prepare_materials(bioyond_client)
# print(f"\n准备的材料数据: {materials}")

View File

@@ -0,0 +1,783 @@
import json
import requests
from typing import List, Dict, Any
from unilabos.devices.workstation.bioyond_studio.station import BioyondWorkstation
from unilabos.devices.workstation.bioyond_studio.config import (
WORKFLOW_STEP_IDS,
WORKFLOW_TO_SECTION_MAP,
ACTION_NAMES
)
from unilabos.devices.workstation.bioyond_studio.config import API_CONFIG
class BioyondReactionStation(BioyondWorkstation):
"""Bioyond反应站类
继承自BioyondWorkstation提供反应站特定的业务方法
"""
def __init__(self, config: dict = None, deck=None, protocol_type=None, **kwargs):
"""初始化反应站
Args:
config: 配置字典应包含workflow_mappings等配置
deck: Deck对象
protocol_type: 协议类型由ROS系统传递此处忽略
**kwargs: 其他可能的参数
"""
if deck is None and config:
deck = config.get('deck')
print(f"BioyondReactionStation初始化 - config包含workflow_mappings: {'workflow_mappings' in (config or {})}")
if config and 'workflow_mappings' in config:
print(f"workflow_mappings内容: {config['workflow_mappings']}")
super().__init__(bioyond_config=config, deck=deck)
print(f"BioyondReactionStation初始化完成 - workflow_mappings: {self.workflow_mappings}")
print(f"workflow_mappings长度: {len(self.workflow_mappings)}")
# ==================== 工作流方法 ====================
def reactor_taken_out(self):
"""反应器取出"""
self.append_to_workflow_sequence('{"web_workflow_name": "reactor_taken_out"}')
reactor_taken_out_params = {"param_values": {}}
self.pending_task_params.append(reactor_taken_out_params)
print(f"成功添加反应器取出工作流")
print(f"当前队列长度: {len(self.pending_task_params)}")
return json.dumps({"suc": True})
def reactor_taken_in(
self,
assign_material_name: str,
cutoff: str = "900000",
temperature: float = -10.00
):
"""反应器放入
Args:
assign_material_name: 物料名称(不能为空)
cutoff: 粘度上限(需为有效数字字符串,默认 "900000"
temperature: 温度设定°C范围-50.00 至 100.00
Returns:
str: JSON 字符串,格式为 {"suc": True}
Raises:
ValueError: 若物料名称无效或 cutoff 格式错误
"""
if not assign_material_name:
raise ValueError("物料名称不能为空")
try:
float(cutoff)
except ValueError:
raise ValueError("cutoff 必须是有效的数字字符串")
self.append_to_workflow_sequence('{"web_workflow_name": "reactor_taken_in"}')
material_id = self.hardware_interface._get_material_id_by_name(assign_material_name)
if material_id is None:
raise ValueError(f"无法找到物料 {assign_material_name} 的 ID")
if isinstance(temperature, str):
temperature = float(temperature)
step_id = WORKFLOW_STEP_IDS["reactor_taken_in"]["config"]
reactor_taken_in_params = {
"param_values": {
step_id: {
ACTION_NAMES["reactor_taken_in"]["config"]: [
{"m": 0, "n": 3, "Key": "cutoff", "Value": cutoff},
{"m": 0, "n": 3, "Key": "assignMaterialName", "Value": material_id}
],
ACTION_NAMES["reactor_taken_in"]["stirring"]: [
{"m": 0, "n": 3, "Key": "temperature", "Value": f"{temperature:.2f}"}
]
}
}
}
self.pending_task_params.append(reactor_taken_in_params)
print(f"成功添加反应器放入参数: material={assign_material_name}->ID:{material_id}, cutoff={cutoff}, temp={temperature:.2f}")
print(f"当前队列长度: {len(self.pending_task_params)}")
return json.dumps({"suc": True})
def solid_feeding_vials(
self,
material_id: str,
time: str = "0",
torque_variation: int = 1,
assign_material_name: str = None,
temperature: float = 25.00
):
"""固体进料小瓶
Args:
material_id: 粉末类型ID1=盐21分钟2=面粉27分钟3=BTDA38分钟
time: 观察时间(分钟)
torque_variation: 是否观察(int类型, 1=否, 2=是)
assign_material_name: 物料名称(用于获取试剂瓶位ID)
temperature: 温度设定(°C)
"""
self.append_to_workflow_sequence('{"web_workflow_name": "Solid_feeding_vials"}')
material_id_m = self.hardware_interface._get_material_id_by_name(assign_material_name) if assign_material_name else None
if isinstance(temperature, str):
temperature = float(temperature)
feeding_step_id = WORKFLOW_STEP_IDS["solid_feeding_vials"]["feeding"]
observe_step_id = WORKFLOW_STEP_IDS["solid_feeding_vials"]["observe"]
solid_feeding_vials_params = {
"param_values": {
feeding_step_id: {
ACTION_NAMES["solid_feeding_vials"]["feeding"]: [
{"m": 0, "n": 3, "Key": "materialId", "Value": material_id},
{"m": 0, "n": 3, "Key": "assignMaterialName", "Value": material_id_m} if material_id_m else {}
]
},
observe_step_id: {
ACTION_NAMES["solid_feeding_vials"]["observe"]: [
{"m": 1, "n": 0, "Key": "time", "Value": time},
{"m": 1, "n": 0, "Key": "torqueVariation", "Value": str(torque_variation)},
{"m": 1, "n": 0, "Key": "temperature", "Value": f"{temperature:.2f}"}
]
}
}
}
self.pending_task_params.append(solid_feeding_vials_params)
print(f"成功添加固体进料小瓶参数: material_id={material_id}, time={time}min, torque={torque_variation}, temp={temperature:.2f}°C")
print(f"当前队列长度: {len(self.pending_task_params)}")
return json.dumps({"suc": True})
def liquid_feeding_vials_non_titration(
self,
volume_formula: str,
assign_material_name: str,
titration_type: str = "1",
time: str = "0",
torque_variation: int = 1,
temperature: float = 25.00
):
"""液体进料小瓶(非滴定)
Args:
volume_formula: 分液公式(μL)
assign_material_name: 物料名称
titration_type: 是否滴定(1=否, 2=是)
time: 观察时间(分钟)
torque_variation: 是否观察(int类型, 1=否, 2=是)
temperature: 温度(°C)
"""
self.append_to_workflow_sequence('{"web_workflow_name": "Liquid_feeding_vials(non-titration)"}')
material_id = self.hardware_interface._get_material_id_by_name(assign_material_name)
if material_id is None:
raise ValueError(f"无法找到物料 {assign_material_name} 的 ID")
if isinstance(temperature, str):
temperature = float(temperature)
liquid_step_id = WORKFLOW_STEP_IDS["liquid_feeding_vials_non_titration"]["liquid"]
observe_step_id = WORKFLOW_STEP_IDS["liquid_feeding_vials_non_titration"]["observe"]
params = {
"param_values": {
liquid_step_id: {
ACTION_NAMES["liquid_feeding_vials_non_titration"]["liquid"]: [
{"m": 0, "n": 3, "Key": "volumeFormula", "Value": volume_formula},
{"m": 0, "n": 3, "Key": "assignMaterialName", "Value": material_id},
{"m": 0, "n": 3, "Key": "titrationType", "Value": titration_type}
]
},
observe_step_id: {
ACTION_NAMES["liquid_feeding_vials_non_titration"]["observe"]: [
{"m": 1, "n": 0, "Key": "time", "Value": time},
{"m": 1, "n": 0, "Key": "torqueVariation", "Value": str(torque_variation)},
{"m": 1, "n": 0, "Key": "temperature", "Value": f"{temperature:.2f}"}
]
}
}
}
self.pending_task_params.append(params)
print(f"成功添加液体进料小瓶(非滴定)参数: volume={volume_formula}μL, material={assign_material_name}->ID:{material_id}")
print(f"当前队列长度: {len(self.pending_task_params)}")
return json.dumps({"suc": True})
def liquid_feeding_solvents(
self,
assign_material_name: str,
volume: str = None,
solvents = None,
titration_type: str = "1",
time: str = "360",
torque_variation: int = 2,
temperature: float = 25.00
):
"""液体进料-溶剂
Args:
assign_material_name: 物料名称
volume: 分液量(μL),直接指定体积(可选,如果提供solvents则自动计算)
solvents: 溶剂信息的字典或JSON字符串(可选),格式如下:
{
"additional_solvent": 33.55092503597727, # 溶剂体积(mL)
"total_liquid_volume": 48.00916988195499
}
如果提供solvents,则从中提取additional_solvent并转换为μL
titration_type: 是否滴定(1=否, 2=是)
time: 观察时间(分钟)
torque_variation: 是否观察(int类型, 1=否, 2=是)
temperature: 温度设定(°C)
"""
# 处理 volume 参数:优先使用直接传入的 volume,否则从 solvents 中提取
if volume is None and solvents is not None:
# 参数类型转换:如果是字符串则解析为字典
if isinstance(solvents, str):
try:
solvents = json.loads(solvents)
except json.JSONDecodeError as e:
raise ValueError(f"solvents参数JSON解析失败: {str(e)}")
# 参数验证
if not isinstance(solvents, dict):
raise ValueError("solvents 必须是字典类型或有效的JSON字符串")
# 提取 additional_solvent 值
additional_solvent = solvents.get("additional_solvent")
if additional_solvent is None:
raise ValueError("solvents 中没有找到 additional_solvent 字段")
# 转换为微升(μL) - 从毫升(mL)转换
volume = str(float(additional_solvent) * 1000)
elif volume is None:
raise ValueError("必须提供 volume 或 solvents 参数之一")
self.append_to_workflow_sequence('{"web_workflow_name": "Liquid_feeding_solvents"}')
material_id = self.hardware_interface._get_material_id_by_name(assign_material_name)
if material_id is None:
raise ValueError(f"无法找到物料 {assign_material_name} 的 ID")
if isinstance(temperature, str):
temperature = float(temperature)
liquid_step_id = WORKFLOW_STEP_IDS["liquid_feeding_solvents"]["liquid"]
observe_step_id = WORKFLOW_STEP_IDS["liquid_feeding_solvents"]["observe"]
params = {
"param_values": {
liquid_step_id: {
ACTION_NAMES["liquid_feeding_solvents"]["liquid"]: [
{"m": 0, "n": 1, "Key": "titrationType", "Value": titration_type},
{"m": 0, "n": 1, "Key": "volume", "Value": volume},
{"m": 0, "n": 1, "Key": "assignMaterialName", "Value": material_id}
]
},
observe_step_id: {
ACTION_NAMES["liquid_feeding_solvents"]["observe"]: [
{"m": 1, "n": 0, "Key": "time", "Value": time},
{"m": 1, "n": 0, "Key": "torqueVariation", "Value": str(torque_variation)},
{"m": 1, "n": 0, "Key": "temperature", "Value": f"{temperature:.2f}"}
]
}
}
}
self.pending_task_params.append(params)
print(f"成功添加液体进料溶剂参数: material={assign_material_name}->ID:{material_id}, volume={volume}μL")
print(f"当前队列长度: {len(self.pending_task_params)}")
return json.dumps({"suc": True})
def liquid_feeding_titration(
self,
volume_formula: str,
assign_material_name: str,
titration_type: str = "1",
time: str = "90",
torque_variation: int = 2,
temperature: float = 25.00
):
"""液体进料(滴定)
Args:
volume_formula: 分液公式(μL)
assign_material_name: 物料名称
titration_type: 是否滴定(1=否, 2=是)
time: 观察时间(分钟)
torque_variation: 是否观察(int类型, 1=否, 2=是)
temperature: 温度(°C)
"""
self.append_to_workflow_sequence('{"web_workflow_name": "Liquid_feeding(titration)"}')
material_id = self.hardware_interface._get_material_id_by_name(assign_material_name)
if material_id is None:
raise ValueError(f"无法找到物料 {assign_material_name} 的 ID")
if isinstance(temperature, str):
temperature = float(temperature)
liquid_step_id = WORKFLOW_STEP_IDS["liquid_feeding_titration"]["liquid"]
observe_step_id = WORKFLOW_STEP_IDS["liquid_feeding_titration"]["observe"]
params = {
"param_values": {
liquid_step_id: {
ACTION_NAMES["liquid_feeding_titration"]["liquid"]: [
{"m": 0, "n": 3, "Key": "volumeFormula", "Value": volume_formula},
{"m": 0, "n": 3, "Key": "titrationType", "Value": titration_type},
{"m": 0, "n": 3, "Key": "assignMaterialName", "Value": material_id}
]
},
observe_step_id: {
ACTION_NAMES["liquid_feeding_titration"]["observe"]: [
{"m": 1, "n": 0, "Key": "time", "Value": time},
{"m": 1, "n": 0, "Key": "torqueVariation", "Value": str(torque_variation)},
{"m": 1, "n": 0, "Key": "temperature", "Value": f"{temperature:.2f}"}
]
}
}
}
self.pending_task_params.append(params)
print(f"成功添加液体进料滴定参数: volume={volume_formula}μL, material={assign_material_name}->ID:{material_id}")
print(f"当前队列长度: {len(self.pending_task_params)}")
return json.dumps({"suc": True})
def liquid_feeding_beaker(
self,
volume: str = "35000",
assign_material_name: str = "BAPP",
time: str = "0",
torque_variation: int = 1,
titration_type: str = "1",
temperature: float = 25.00
):
"""液体进料烧杯
Args:
volume: 分液量(μL)
assign_material_name: 物料名称(试剂瓶位)
time: 观察时间(分钟)
torque_variation: 是否观察(int类型, 1=否, 2=是)
titration_type: 是否滴定(1=否, 2=是)
temperature: 温度设定(°C)
"""
self.append_to_workflow_sequence('{"web_workflow_name": "liquid_feeding_beaker"}')
material_id = self.hardware_interface._get_material_id_by_name(assign_material_name)
if material_id is None:
raise ValueError(f"无法找到物料 {assign_material_name} 的 ID")
if isinstance(temperature, str):
temperature = float(temperature)
liquid_step_id = WORKFLOW_STEP_IDS["liquid_feeding_beaker"]["liquid"]
observe_step_id = WORKFLOW_STEP_IDS["liquid_feeding_beaker"]["observe"]
params = {
"param_values": {
liquid_step_id: {
ACTION_NAMES["liquid_feeding_beaker"]["liquid"]: [
{"m": 0, "n": 2, "Key": "volume", "Value": volume},
{"m": 0, "n": 2, "Key": "assignMaterialName", "Value": material_id},
{"m": 0, "n": 2, "Key": "titrationType", "Value": titration_type}
]
},
observe_step_id: {
ACTION_NAMES["liquid_feeding_beaker"]["observe"]: [
{"m": 1, "n": 0, "Key": "time", "Value": time},
{"m": 1, "n": 0, "Key": "torqueVariation", "Value": str(torque_variation)},
{"m": 1, "n": 0, "Key": "temperature", "Value": f"{temperature:.2f}"}
]
}
}
}
self.pending_task_params.append(params)
print(f"成功添加液体进料烧杯参数: volume={volume}μL, material={assign_material_name}->ID:{material_id}")
print(f"当前队列长度: {len(self.pending_task_params)}")
return json.dumps({"suc": True})
def drip_back(
self,
assign_material_name: str,
volume: str,
titration_type: str = "1",
time: str = "90",
torque_variation: int = 2,
temperature: float = 25.00
):
"""滴回去
Args:
assign_material_name: 物料名称(液体种类)
volume: 分液量(μL)
titration_type: 是否滴定(1=否, 2=是)
time: 观察时间(分钟)
torque_variation: 是否观察(int类型, 1=否, 2=是)
temperature: 温度(°C)
"""
self.append_to_workflow_sequence('{"web_workflow_name": "drip_back"}')
material_id = self.hardware_interface._get_material_id_by_name(assign_material_name)
if material_id is None:
raise ValueError(f"无法找到物料 {assign_material_name} 的 ID")
if isinstance(temperature, str):
temperature = float(temperature)
liquid_step_id = WORKFLOW_STEP_IDS["drip_back"]["liquid"]
observe_step_id = WORKFLOW_STEP_IDS["drip_back"]["observe"]
params = {
"param_values": {
liquid_step_id: {
ACTION_NAMES["drip_back"]["liquid"]: [
{"m": 0, "n": 1, "Key": "titrationType", "Value": titration_type},
{"m": 0, "n": 1, "Key": "assignMaterialName", "Value": material_id},
{"m": 0, "n": 1, "Key": "volume", "Value": volume}
]
},
observe_step_id: {
ACTION_NAMES["drip_back"]["observe"]: [
{"m": 1, "n": 0, "Key": "time", "Value": time},
{"m": 1, "n": 0, "Key": "torqueVariation", "Value": str(torque_variation)},
{"m": 1, "n": 0, "Key": "temperature", "Value": f"{temperature:.2f}"}
]
}
}
}
self.pending_task_params.append(params)
print(f"成功添加滴回去参数: material={assign_material_name}->ID:{material_id}, volume={volume}μL")
print(f"当前队列长度: {len(self.pending_task_params)}")
return json.dumps({"suc": True})
# ==================== 工作流管理方法 ====================
def get_workflow_sequence(self) -> List[str]:
"""获取当前工作流执行顺序
Returns:
工作流名称列表
"""
id_to_name = {workflow_id: name for name, workflow_id in self.workflow_mappings.items()}
workflow_names = []
for workflow_id in self.workflow_sequence:
workflow_name = id_to_name.get(workflow_id, workflow_id)
workflow_names.append(workflow_name)
print(f"工作流序列: {workflow_names}")
return workflow_names
def workflow_step_query(self, workflow_id: str) -> dict:
"""查询工作流步骤参数
Args:
workflow_id: 工作流ID
Returns:
工作流步骤参数字典
"""
return self.hardware_interface.workflow_step_query(workflow_id)
def create_order(self, json_str: str) -> dict:
"""创建订单
Args:
json_str: 订单参数的JSON字符串
Returns:
创建结果
"""
return self.hardware_interface.create_order(json_str)
# ==================== 工作流执行核心方法 ====================
def process_web_workflows(self, web_workflow_json: str) -> List[Dict[str, str]]:
"""处理网页工作流列表
Args:
web_workflow_json: JSON 格式的网页工作流列表
Returns:
List[Dict[str, str]]: 包含工作流 ID 和名称的字典列表
"""
try:
web_workflow_data = json.loads(web_workflow_json)
web_workflow_list = web_workflow_data.get("web_workflow_list", [])
workflows_result = []
for name in web_workflow_list:
workflow_id = self.workflow_mappings.get(name, "")
if not workflow_id:
print(f"警告:未找到工作流名称 {name} 对应的 ID")
continue
workflows_result.append({"id": workflow_id, "name": name})
print(f"process_web_workflows 输出: {workflows_result}")
return workflows_result
except json.JSONDecodeError as e:
print(f"错误:无法解析 web_workflow_json: {e}")
return []
except Exception as e:
print(f"错误:处理工作流失败: {e}")
return []
def process_and_execute_workflow(self, workflow_name: str, task_name: str) -> dict:
"""
一站式处理工作流程:解析网页工作流列表,合并工作流(带参数),然后发布任务
Args:
workflow_name: 合并后的工作流名称
task_name: 任务名称
Returns:
任务创建结果
"""
web_workflow_list = self.get_workflow_sequence()
print(f"\n{'='*60}")
print(f"📋 处理网页工作流列表: {web_workflow_list}")
print(f"{'='*60}")
web_workflow_json = json.dumps({"web_workflow_list": web_workflow_list})
workflows_result = self.process_web_workflows(web_workflow_json)
if not workflows_result:
return self._create_error_result("处理网页工作流列表失败", "process_web_workflows")
print(f"workflows_result 类型: {type(workflows_result)}")
print(f"workflows_result 内容: {workflows_result}")
workflows_with_params = self._build_workflows_with_parameters(workflows_result)
merge_data = {
"name": workflow_name,
"workflows": workflows_with_params
}
# print(f"\n🔄 合并工作流(带参数),名称: {workflow_name}")
merged_workflow = self.merge_workflow_with_parameters(json.dumps(merge_data))
if not merged_workflow:
return self._create_error_result("合并工作流失败", "merge_workflow_with_parameters")
workflow_id = merged_workflow.get("subWorkflows", [{}])[0].get("id", "")
# print(f"\n📤 使用工作流创建任务: {workflow_name} (ID: {workflow_id})")
order_params = [{
"orderCode": f"task_{self.hardware_interface.get_current_time_iso8601()}",
"orderName": task_name,
"workFlowId": workflow_id,
"borderNumber": 1,
"paramValues": {}
}]
result = self.create_order(json.dumps(order_params))
if not result:
return self._create_error_result("创建任务失败", "create_order")
# 清空工作流序列和参数,防止下次执行时累积重复
self.pending_task_params = []
self.clear_workflows() # 清空工作流序列,避免重复累积
# print(f"\n✅ 任务创建成功: {result}")
# print(f"\n✅ 任务创建成功")
print(f"{'='*60}\n")
return json.dumps({"success": True, "result": result})
def _build_workflows_with_parameters(self, workflows_result: list) -> list:
"""
构建带参数的工作流列表
Args:
workflows_result: 处理后的工作流列表(应为包含 id 和 name 的字典列表)
Returns:
符合新接口格式的工作流参数结构
"""
workflows_with_params = []
total_params = 0
successful_params = 0
failed_params = []
for idx, workflow_info in enumerate(workflows_result):
if not isinstance(workflow_info, dict):
print(f"错误workflows_result[{idx}] 不是字典,而是 {type(workflow_info)}: {workflow_info}")
continue
workflow_id = workflow_info.get("id")
if not workflow_id:
print(f"警告workflows_result[{idx}] 缺少 'id'")
continue
workflow_name = workflow_info.get("name", "")
# print(f"\n🔧 处理工作流 [{idx}]: {workflow_name} (ID: {workflow_id})")
if idx >= len(self.pending_task_params):
# print(f" ⚠️ 无对应参数,跳过")
workflows_with_params.append({"id": workflow_id})
continue
param_data = self.pending_task_params[idx]
param_values = param_data.get("param_values", {})
if not param_values:
# print(f" ⚠️ 参数为空,跳过")
workflows_with_params.append({"id": workflow_id})
continue
step_parameters = {}
for step_id, actions_dict in param_values.items():
# print(f" 📍 步骤ID: {step_id}")
for action_name, param_list in actions_dict.items():
# print(f" 🔹 模块: {action_name}, 参数数量: {len(param_list)}")
if step_id not in step_parameters:
step_parameters[step_id] = {}
if action_name not in step_parameters[step_id]:
step_parameters[step_id][action_name] = []
for param_item in param_list:
param_key = param_item.get("Key", "")
param_value = param_item.get("Value", "")
total_params += 1
step_parameters[step_id][action_name].append({
"Key": param_key,
"DisplayValue": param_value,
"Value": param_value
})
successful_params += 1
# print(f" ✓ {param_key} = {param_value}")
workflows_with_params.append({
"id": workflow_id,
"stepParameters": step_parameters
})
self._print_mapping_stats(total_params, successful_params, failed_params)
return workflows_with_params
def _print_mapping_stats(self, total: int, success: int, failed: list):
"""打印参数映射统计"""
print(f"\n{'='*20} 参数映射统计 {'='*20}")
print(f"📊 总参数数量: {total}")
print(f"✅ 成功映射: {success}")
print(f"❌ 映射失败: {len(failed)}")
if not failed:
print("🎉 成功映射所有参数!")
else:
print(f"⚠️ 失败的参数: {', '.join(failed)}")
success_rate = (success/total*100) if total > 0 else 0
print(f"📈 映射成功率: {success_rate:.1f}%")
print("="*60)
def _create_error_result(self, error_msg: str, step: str) -> str:
"""创建统一的错误返回格式"""
print(f"{error_msg}")
return json.dumps({
"success": False,
"error": f"process_and_execute_workflow: {error_msg}",
"method": "process_and_execute_workflow",
"step": step
})
def merge_workflow_with_parameters(self, json_str: str) -> dict:
"""
调用新接口:合并工作流并传递参数
Args:
json_str: JSON格式的字符串包含:
- name: 工作流名称
- workflows: [{"id": "工作流ID", "stepParameters": {...}}]
Returns:
合并后的工作流信息
"""
try:
data = json.loads(json_str)
# 在工作流名称后面添加时间戳,避免重复
if "name" in data and data["name"]:
timestamp = self.hardware_interface.get_current_time_iso8601().replace(":", "-").replace(".", "-")
original_name = data["name"]
data["name"] = f"{original_name}_{timestamp}"
print(f"🕒 工作流名称已添加时间戳: {original_name} -> {data['name']}")
request_data = {
"apiKey": API_CONFIG["api_key"],
"requestTime": self.hardware_interface.get_current_time_iso8601(),
"data": data
}
print(f"\n📤 发送合并请求:")
print(f" 工作流名称: {data.get('name')}")
print(f" 子工作流数量: {len(data.get('workflows', []))}")
# 打印完整的POST请求内容
print(f"\n🔍 POST请求详细内容:")
print(f" URL: {self.hardware_interface.host}/api/lims/workflow/merge-workflow-with-parameters")
print(f" Headers: {{'Content-Type': 'application/json'}}")
print(f" Request Data:")
print(f" {json.dumps(request_data, indent=4, ensure_ascii=False)}")
#
response = requests.post(
f"{self.hardware_interface.host}/api/lims/workflow/merge-workflow-with-parameters",
json=request_data,
headers={"Content-Type": "application/json"},
timeout=30
)
# # 打印响应详细内容
# print(f"\n📥 POST响应详细内容:")
# print(f" 状态码: {response.status_code}")
# print(f" 响应头: {dict(response.headers)}")
# print(f" 响应体: {response.text}")
# #
try:
result = response.json()
# #
# print(f"\n📋 解析后的响应JSON:")
# print(f" {json.dumps(result, indent=4, ensure_ascii=False)}")
# #
except json.JSONDecodeError:
print(f"❌ 服务器返回非 JSON 格式响应: {response.text}")
return None
if result.get("code") == 1:
print(f"✅ 工作流合并成功(带参数)")
return result.get("data", {})
else:
error_msg = result.get('message', '未知错误')
print(f"❌ 工作流合并失败: {error_msg}")
return None
except requests.exceptions.Timeout:
print(f"❌ 合并工作流请求超时")
return None
except requests.exceptions.RequestException as e:
print(f"❌ 合并工作流网络异常: {str(e)}")
return None
except json.JSONDecodeError as e:
print(f"❌ 合并工作流响应解析失败: {str(e)}")
return None
except Exception as e:
print(f"❌ 合并工作流异常: {str(e)}")
return None
def _validate_and_refresh_workflow_if_needed(self, workflow_name: str) -> bool:
"""验证工作流ID是否有效如果无效则重新合并
Args:
workflow_name: 工作流名称
Returns:
bool: 验证或刷新是否成功
"""
print(f"\n🔍 验证工作流ID有效性...")
if not self.workflow_sequence:
print(f" ⚠️ 工作流序列为空,需要重新合并")
return False
first_workflow_id = self.workflow_sequence[0]
try:
structure = self.workflow_step_query(first_workflow_id)
if structure:
print(f" ✅ 工作流ID有效")
return True
else:
print(f" ⚠️ 工作流ID已过期需要重新合并")
return False
except Exception as e:
print(f" ❌ 工作流ID验证失败: {e}")
print(f" 💡 将重新合并工作流")
return False

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@@ -24,6 +24,13 @@ class ElectrodeSheetState(TypedDict):
thickness: float # 厚度 (mm)
mass: float # 质量 (g)
material_type: str # 材料类型(正极、负极、隔膜、弹片、垫片、铝箔等)
height: float
electrolyte_name: str
data_electrolyte_code: str
open_circuit_voltage: float
assembly_pressure: float
electrolyte_volume: float
info: Optional[str] # 附加信息
class ElectrodeSheet(Resource):
@@ -61,6 +68,7 @@ class ElectrodeSheet(Resource):
info=None
)
# TODO: 这个还要不要给self._unilabos_state赋值的
def load_state(self, state: Dict[str, Any]) -> None:
"""格式不变"""
super().load_state(state)
@@ -146,10 +154,10 @@ class MaterialHole(Resource):
):
"""放置极片"""
# TODO: 这里要改diameter找不到加入._unilabos_state后应该没问题
if resource._unilabos_state["diameter"] > self._unilabos_state["diameter"]:
raise ValueError(f"极片直径 {resource._unilabos_state['diameter']} 超过洞位直径 {self._unilabos_state['diameter']}")
if len(self.children) >= self._unilabos_state["max_sheets"]:
raise ValueError(f"洞位已满,无法放置更多极片")
#if resource._unilabos_state["diameter"] > self._unilabos_state["diameter"]:
# raise ValueError(f"极片直径 {resource._unilabos_state['diameter']} 超过洞位直径 {self._unilabos_state['diameter']}")
#if len(self.children) >= self._unilabos_state["max_sheets"]:
# raise ValueError(f"洞位已满,无法放置更多极片")
super().assign_child_resource(resource, location, reassign)
# 根据children的编号取物料对象。
@@ -164,8 +172,6 @@ class MaterialPlateState(TypedDict):
hole_diameter: float
info: Optional[str] # 附加信息
class MaterialPlate(ItemizedResource[MaterialHole]):
"""料板类 - 4x4个洞位每个洞位放1个极片"""
@@ -323,12 +329,13 @@ class PlateSlot(ResourceStack):
class ClipMagazineHole(Container):
"""子弹夹洞位类"""
children: List[ElectrodeSheet] = []
def __init__(
self,
name: str,
diameter: float,
depth: float,
max_sheets: int = 100,
category: str = "clip_magazine_hole",
):
"""初始化子弹夹洞位
@@ -337,6 +344,7 @@ class ClipMagazineHole(Container):
name: 洞位名称
diameter: 洞直径 (mm)
depth: 洞深度 (mm)
max_sheets: 最大极片数量
category: 类别
"""
super().__init__(
@@ -348,143 +356,48 @@ class ClipMagazineHole(Container):
)
self.diameter = diameter
self.depth = depth
self.max_sheets = max_sheets
self._sheets: List[ElectrodeSheet] = []
def can_add_sheet(self, sheet: ElectrodeSheet) -> bool:
"""检查是否可以添加极片
根据洞的深度和极片的厚度来判断是否可以添加极片
"""
# 检查极片直径是否适合洞的直径
if sheet._unilabos_state["diameter"] > self.diameter:
return False
# 计算当前已添加极片的总厚度
current_thickness = sum(s._unilabos_state["thickness"] for s in self.children)
# 检查添加新极片后总厚度是否超过洞的深度
if current_thickness + sheet._unilabos_state["thickness"] > self.depth:
return False
return True
"""检查是否可以添加极片"""
return (len(self._sheets) < self.max_sheets and
sheet.diameter <= self.diameter)
def add_sheet(self, sheet: ElectrodeSheet) -> None:
"""添加极片"""
if not self.can_add_sheet(sheet):
raise ValueError(f"无法向洞位 {self.name} 添加极片")
self._sheets.append(sheet)
def assign_child_resource(
self,
resource: ElectrodeSheet,
location: Optional[Coordinate] = None,
reassign: bool = True,
):
"""放置极片到洞位中
Args:
resource: 要放置的极片
location: 极片在洞位中的位置对于洞位通常为None
reassign: 是否允许重新分配
"""
# 检查是否可以添加极片
if not self.can_add_sheet(resource):
raise ValueError(f"无法向洞位 {self.name} 添加极片:直径或厚度不匹配")
# 调用父类方法实际执行分配
super().assign_child_resource(resource, location, reassign)
def unassign_child_resource(self, resource: ElectrodeSheet):
"""从洞位中移除极片
Args:
resource: 要移除的极片
"""
if resource not in self.children:
raise ValueError(f"极片 {resource.name} 不在洞位 {self.name}")
# 调用父类方法实际执行移除
super().unassign_child_resource(resource)
def take_sheet(self) -> ElectrodeSheet:
"""取出极片"""
if len(self._sheets) == 0:
raise ValueError(f"洞位 {self.name} 没有极片")
return self._sheets.pop()
def get_sheet_count(self) -> int:
"""获取极片数量"""
return len(self._sheets)
def serialize_state(self) -> Dict[str, Any]:
return {
"sheet_count": len(self.children),
"sheets": [sheet.serialize() for sheet in self.children],
"sheet_count": len(self._sheets),
"sheets": [sheet.serialize() for sheet in self._sheets],
}
class ClipMagazine_four(ItemizedResource[ClipMagazineHole]):
"""子弹夹类 - 有4个洞位每个洞位放多个极片"""
children: List[ClipMagazineHole]
def __init__(
self,
name: str,
size_x: float,
size_y: float,
size_z: float,
hole_diameter: float = 14.0,
hole_depth: float = 10.0,
hole_spacing: float = 25.0,
max_sheets_per_hole: int = 100,
category: str = "clip_magazine_four",
model: Optional[str] = None,
):
"""初始化子弹夹
Args:
name: 子弹夹名称
size_x: 长度 (mm)
size_y: 宽度 (mm)
size_z: 高度 (mm)
hole_diameter: 洞直径 (mm)
hole_depth: 洞深度 (mm)
hole_spacing: 洞位间距 (mm)
max_sheets_per_hole: 每个洞位最大极片数量
category: 类别
model: 型号
"""
# 创建4个洞位排成2x2布局
holes = create_ordered_items_2d(
klass=ClipMagazineHole,
num_items_x=2,
num_items_y=2,
dx=(size_x - 2 * hole_spacing) / 2, # 居中
dy=(size_y - hole_spacing) / 2, # 居中
dz=size_z - 0,
item_dx=hole_spacing,
item_dy=hole_spacing,
diameter=hole_diameter,
depth=hole_depth,
)
super().__init__(
name=name,
size_x=size_x,
size_y=size_y,
size_z=size_z,
ordered_items=holes,
category=category,
model=model,
)
# 保存洞位的直径和深度
self.hole_diameter = hole_diameter
self.hole_depth = hole_depth
self.max_sheets_per_hole = max_sheets_per_hole
def serialize(self) -> dict:
return {
**super().serialize(),
"hole_diameter": self.hole_diameter,
"hole_depth": self.hole_depth,
"max_sheets_per_hole": self.max_sheets_per_hole,
}
# TODO: 这个要改
class ClipMagazine(ItemizedResource[ClipMagazineHole]):
class ClipMagazine(Resource):
"""子弹夹类 - 有6个洞位每个洞位放多个极片"""
children: List[ClipMagazineHole]
def __init__(
self,
name: str,
size_x: float,
size_y: float,
size_z: float,
hole_diameter: float = 14.0,
hole_depth: float = 10.0,
hole_diameter: float = 20.0,
hole_depth: float = 50.0,
hole_spacing: float = 25.0,
max_sheets_per_hole: int = 100,
category: str = "clip_magazine",
@@ -528,7 +441,6 @@ class ClipMagazine(ItemizedResource[ClipMagazineHole]):
model=model,
)
# 保存洞位的直径和深度
self.hole_diameter = hole_diameter
self.hole_depth = hole_depth
self.max_sheets_per_hole = max_sheets_per_hole
@@ -545,9 +457,9 @@ class BatteryState(TypedDict):
"""电池状态字典"""
diameter: float
height: float
electrolyte_name: str
assembly_pressure: float
electrolyte_volume: float
electrolyte_name: str
class Battery(Resource):
"""电池类 - 可容纳极片"""
@@ -556,6 +468,9 @@ class Battery(Resource):
def __init__(
self,
name: str,
size_x=1,
size_y=1,
size_z=1,
category: str = "battery",
):
"""初始化电池
@@ -576,7 +491,13 @@ class Battery(Resource):
size_z=1,
category=category,
)
self._unilabos_state: BatteryState = BatteryState()
self._unilabos_state: BatteryState = BatteryState(
diameter = 1.0,
height = 1.0,
assembly_pressure = 1.0,
electrolyte_volume = 1.0,
electrolyte_name = "DP001"
)
def add_electrolyte_with_bottle(self, bottle: Bottle) -> bool:
to_add_name = bottle._unilabos_state["electrolyte_name"]
@@ -664,6 +585,7 @@ class BatteryPressSlot(Resource):
reassign: bool = True,
):
"""放置极片"""
# TODO: 让高京看下槽位只有一个电池时是否这么写。
if self.has_battery():
raise ValueError(f"槽位已含有一个电池,无法再放置其他电池")
super().assign_child_resource(resource, location, reassign)
@@ -672,6 +594,7 @@ class BatteryPressSlot(Resource):
def get_battery_info(self, index: int) -> Battery:
return self.children[0]
# TODO:这个移液枪架子看一下从哪继承
class TipBox64State(TypedDict):
"""电池状态字典"""
tip_diameter: float = 5.0
@@ -730,15 +653,6 @@ class TipBox64(TipRack):
make_tip=make_tip,
)
self._unilabos_state: WasteTipBoxstate = WasteTipBoxstate()
# 记录网格参数用于前端渲染
self._grid_params = {
"num_items_x": 8,
"num_items_y": 8,
"dx": 8.0,
"dy": 8.0,
"item_dx": 9.0,
"item_dy": 9.0,
}
super().__init__(
name=name,
size_x=size_x,
@@ -750,12 +664,6 @@ class TipBox64(TipRack):
with_tips=True,
)
def serialize(self) -> dict:
return {
**super().serialize(),
**self._grid_params,
}
class WasteTipBoxstate(TypedDict):
@@ -833,34 +741,19 @@ class BottleRackState(TypedDict):
name_to_index: dict
class BottleRackState(TypedDict):
""" bottle_diameter: 瓶子直径 (mm)
bottle_height: 瓶子高度 (mm)
position_spacing: 位置间距 (mm)"""
bottle_diameter: float
bottle_height: float
position_spacing: float
name_to_index: dict
class BottleRack(Resource):
"""瓶架类 - 12个待配位置+12个已配位置"""
children: List[Resource] = []
children: List[Bottle] = []
def __init__(
self,
name: str,
size_x: float,
size_y: float,
size_z: float,
category: str = "bottle_rack",
model: Optional[str] = None,
num_items_x: int = 3,
num_items_y: int = 4,
position_spacing: float = 35.0,
orientation: str = "horizontal",
padding_x: float = 20.0,
padding_y: float = 20.0,
self,
name: str,
size_x: float,
size_y: float,
size_z: float,
category: str = "bottle_rack",
model: Optional[str] = None,
):
"""初始化瓶架
@@ -880,42 +773,13 @@ class BottleRack(Resource):
category=category,
model=model,
)
# 初始化状态
self._unilabos_state: BottleRackState = BottleRackState(
bottle_diameter=30.0,
bottle_height=100.0,
position_spacing=position_spacing,
name_to_index={},
)
# 基于网格生成瓶位坐标映射(居中摆放)
# 使用内边距避免点跑到容器外前端渲染不按mm等比缩放时更稳妥
origin_x = padding_x
origin_y = padding_y
self.index_to_pos = {}
for j in range(num_items_y):
for i in range(num_items_x):
idx = j * num_items_x + i
if orientation == "vertical":
# 纵向:沿 y 方向优先排列
self.index_to_pos[idx] = Coordinate(
x=origin_x + j * position_spacing,
y=origin_y + i * position_spacing,
z=0,
)
else:
# 横向(默认):沿 x 方向优先排列
self.index_to_pos[idx] = Coordinate(
x=origin_x + i * position_spacing,
y=origin_y + j * position_spacing,
z=0,
)
# TODO: 添加瓶位坐标映射
self.index_to_pos = {
0: Coordinate.zero(),
1: Coordinate(x=1, y=2, z=3) # 添加
}
self.name_to_index = {}
self.name_to_pos = {}
self.num_items_x = num_items_x
self.num_items_y = num_items_y
self.orientation = orientation
self.padding_x = padding_x
self.padding_y = padding_y
def load_state(self, state: Dict[str, Any]) -> None:
"""格式不变"""
@@ -925,23 +789,20 @@ class BottleRack(Resource):
def serialize_state(self) -> Dict[str, Dict[str, Any]]:
"""格式不变"""
data = super().serialize_state()
data.update(
self._unilabos_state) # Container自身的信息云端物料将保存这一data本地也通过这里的data进行读写当前类用来表示这个物料的长宽高大小的属性而datastate用来表示物料的内容细节等
data.update(self._unilabos_state) # Container自身的信息云端物料将保存这一data本地也通过这里的data进行读写当前类用来表示这个物料的长宽高大小的属性而datastate用来表示物料的内容细节等
return data
# TODO: 这里有些问题要重新写一下
def assign_child_resource_old(self, resource: Resource, location=Coordinate.zero(), reassign=True):
capacity = self.num_items_x * self.num_items_y
assert len(self.children) < capacity, "瓶架已满,无法添加更多瓶子"
def assign_child_resource(self, resource: Bottle, location=Coordinate.zero(), reassign = True):
assert len(self.children) <= 12, "瓶架已满,无法添加更多瓶子"
index = len(self.children)
location = self.index_to_pos.get(index, Coordinate.zero())
location = Coordinate(x=20 + (index % 4) * 15, y=20 + (index // 4) * 15, z=0)
self.name_to_pos[resource.name] = location
self.name_to_index[resource.name] = index
return super().assign_child_resource(resource, location, reassign)
def assign_child_resource(self, resource: Resource, index: int):
capacity = self.num_items_x * self.num_items_y
assert 0 <= index < capacity, "无效的瓶子索引"
def assign_child_resource_by_index(self, resource: Bottle, index: int):
assert 0 <= index < 12, "无效的瓶子索引"
self.name_to_index[resource.name] = index
location = self.index_to_pos[index]
return super().assign_child_resource(resource, location)
@@ -950,16 +811,9 @@ class BottleRack(Resource):
super().unassign_child_resource(resource)
self.index_to_pos.pop(self.name_to_index.pop(resource.name, None), None)
def serialize(self) -> dict:
return {
**super().serialize(),
"num_items_x": self.num_items_x,
"num_items_y": self.num_items_y,
"position_spacing": self._unilabos_state.get("position_spacing", 35.0),
"orientation": self.orientation,
"padding_x": self.padding_x,
"padding_y": self.padding_y,
}
# def serialize(self):
# self.children.sort(key=lambda x: self.name_to_index.get(x.name, 0))
# return super().serialize()
class BottleState(TypedDict):
@@ -1020,21 +874,23 @@ class CoincellDeck(Deck):
def __init__(
self,
name: str = "coin_cell_deck",
size_x: float = 1620.0, # 3.66m
size_y: float = 1270.0, # 1.23m
size_z: float = 500.0,
size_x: float = 1000.0, # 1m
size_y: float = 1000.0, # 1m
size_z: float = 900.0, # 0.9m
origin: Coordinate = Coordinate(0, 0, 0),
category: str = "coin_cell_deck",
setup: bool = False, # 是否自动执行 setup
):
"""初始化纽扣电池组装工作站台面
Args:
name: 台面名称
size_x: 长度 (mm) - 3.66m
size_y: 宽度 (mm) - 1.23m
size_z: 高度 (mm)
size_x: 长度 (mm) - 1m
size_y: 宽度 (mm) - 1m
size_z: 高度 (mm) - 0.9m
origin: 原点坐标
category: 类别
setup: 是否自动执行 setup 配置标准布局
"""
super().__init__(
name=name,
@@ -1044,246 +900,77 @@ class CoincellDeck(Deck):
origin=origin,
category=category,
)
if setup:
self.setup()
#if __name__ == "__main__":
# # 转移极片的测试代码
# deck = CoincellDeck("coin_cell_deck")
# ban_cao_wei = PlateSlot("ban_cao_wei", max_plates=8)
# deck.assign_child_resource(ban_cao_wei, Coordinate(x=0, y=0, z=0))
#
# plate_1 = MaterialPlate("plate_1", 1,1,1, fill=True)
# for i, hole in enumerate(plate_1.children):
# sheet = ElectrodeSheet(f"hole_{i}_sheet_1")
# sheet._unilabos_state = {
# "diameter": 14,
# "info": "NMC",
# "mass": 5.0,
# "material_type": "positive_electrode",
# "thickness": 0.1
# }
# hole._unilabos_state = {
# "depth": 1.0,
# "diameter": 14,
# "info": "",
# "max_sheets": 1
# }
# hole.assign_child_resource(sheet, Coordinate.zero())
# plate_1._unilabos_state = {
# "hole_spacing_x": 20.0,
# "hole_spacing_y": 20.0,
# "hole_diameter": 5,
# "info": "这是第一块料板"
# }
# plate_1.update_locations()
# ban_cao_wei.assign_child_resource(plate_1, Coordinate.zero())
# # zi_dan_jia = ClipMagazine("zi_dan_jia", 1, 1, 1)
# # deck.assign_child_resource(ban_cao_wei, Coordinate(x=200, y=200, z=0))
#
# from unilabos.resources.graphio import *
# A = tree_to_list([resource_plr_to_ulab(deck)])
# with open("test.json", "w") as f:
# json.dump(A, f)
#
#
#def get_plate_with_14mm_hole(name=""):
# plate = MaterialPlate(name=name)
# for i in range(4):
# for j in range(4):
# hole = MaterialHole(f"{i+1}x{j+1}")
# hole._unilabos_state["diameter"] = 14
# hole._unilabos_state["max_sheets"] = 1
# plate.assign_child_resource(hole)
# return plate
def create_a_liaopan():
liaopan = MaterialPlate(name="liaopan", size_x=120.8, size_y=120.5, size_z=10.0, fill=True)
for i in range(16):
jipian = ElectrodeSheet(name=f"jipian_{i}", size_x= 12, size_y=12, size_z=0.1)
liaopan1.children[i].assign_child_resource(jipian, location=None)
return liaopan
def create_a_coin_cell_deck():
deck = Deck(size_x=1200,
size_y=800,
size_z=900)
#liaopan = TipBox64(name="liaopan")
#创建一个4*4的物料板
liaopan1 = MaterialPlate(name="liaopan1", size_x=120.8, size_y=120.5, size_z=10.0, fill=True)
#把物料板放到桌子上
deck.assign_child_resource(liaopan1, Coordinate(x=0, y=0, z=0))
#创建一个极片
for i in range(16):
jipian = ElectrodeSheet(name=f"jipian_{i}", size_x= 12, size_y=12, size_z=0.1)
liaopan1.children[i].assign_child_resource(jipian, location=None)
#创建一个4*4的物料板
liaopan2 = MaterialPlate(name="liaopan2", size_x=120.8, size_y=120.5, size_z=10.0, fill=True)
#把物料板放到桌子上
deck.assign_child_resource(liaopan2, Coordinate(x=500, y=0, z=0))
#创建一个4*4的物料板
liaopan3 = MaterialPlate(name="liaopan3", size_x=120.8, size_y=120.5, size_z=10.0, fill=True)
#把物料板放到桌子上
deck.assign_child_resource(liaopan3, Coordinate(x=1000, y=0, z=0))
print(deck)
return deck
def setup(self) -> None:
"""设置工作站的标准布局 - 包含3个料盘"""
# 步骤 1: 创建所有料盘
self.plates = {
"liaopan1": MaterialPlate(
name="liaopan1",
size_x=120.8,
size_y=120.5,
size_z=10.0,
fill=True
),
"liaopan2": MaterialPlate(
name="liaopan2",
size_x=120.8,
size_y=120.5,
size_z=10.0,
fill=True
),
"电池料盘": MaterialPlate(
name="电池料盘",
size_x=120.8,
size_y=160.5,
size_z=10.0,
fill=True
),
}
# 步骤 2: 定义料盘在 deck 上的位置
# Deck 尺寸: 1000×1000mm料盘尺寸: 120.8×120.5mm 或 120.8×160.5mm
self.plate_locations = {
"liaopan1": Coordinate(x=50, y=50, z=0), # 左上角,留 50mm 边距
"liaopan2": Coordinate(x=250, y=50, z=0), # 中间liaopan1 右侧
"电池料盘": Coordinate(x=450, y=50, z=0), # 右侧
}
# 步骤 3: 将料盘分配到 deck
for plate_name, plate in self.plates.items():
self.assign_child_resource(
plate,
location=self.plate_locations[plate_name]
)
# 步骤 4: 为 liaopan1 添加初始极片
for i in range(16):
jipian = ElectrodeSheet(
name=f"jipian1_{i}",
size_x=12,
size_y=12,
size_z=0.1
)
self.plates["liaopan1"].children[i].assign_child_resource(
jipian,
location=None
)
import json
if __name__ == "__main__":
electrode1 = BatteryPressSlot()
#print(electrode1.get_size_x())
#print(electrode1.get_size_y())
#print(electrode1.get_size_z())
#jipian = ElectrodeSheet()
#jipian._unilabos_state["diameter"] = 18
#print(jipian.serialize())
#print(jipian.serialize_state())
deck = CoincellDeck()
"""======================================子弹夹============================================"""
zip_dan_jia = ClipMagazine_four("zi_dan_jia", 80, 80, 10)
deck.assign_child_resource(zip_dan_jia, Coordinate(x=1400, y=50, z=0))
zip_dan_jia2 = ClipMagazine_four("zi_dan_jia2", 80, 80, 10)
deck.assign_child_resource(zip_dan_jia2, Coordinate(x=1600, y=200, z=0))
zip_dan_jia3 = ClipMagazine("zi_dan_jia3", 80, 80, 10)
deck.assign_child_resource(zip_dan_jia3, Coordinate(x=1500, y=200, z=0))
zip_dan_jia4 = ClipMagazine("zi_dan_jia4", 80, 80, 10)
deck.assign_child_resource(zip_dan_jia4, Coordinate(x=1500, y=300, z=0))
zip_dan_jia5 = ClipMagazine("zi_dan_jia5", 80, 80, 10)
deck.assign_child_resource(zip_dan_jia5, Coordinate(x=1600, y=300, z=0))
zip_dan_jia6 = ClipMagazine("zi_dan_jia6", 80, 80, 10)
deck.assign_child_resource(zip_dan_jia6, Coordinate(x=1530, y=500, z=0))
zip_dan_jia7 = ClipMagazine("zi_dan_jia7", 80, 80, 10)
deck.assign_child_resource(zip_dan_jia7, Coordinate(x=1180, y=400, z=0))
zip_dan_jia8 = ClipMagazine("zi_dan_jia8", 80, 80, 10)
deck.assign_child_resource(zip_dan_jia8, Coordinate(x=1280, y=400, z=0))
for i in range(4):
jipian = ElectrodeSheet(name=f"zi_dan_jia_jipian_{i}", size_x=12, size_y=12, size_z=0.1)
zip_dan_jia2.children[i].assign_child_resource(jipian, location=None)
for i in range(4):
jipian2 = ElectrodeSheet(name=f"zi_dan_jia2_jipian_{i}", size_x=12, size_y=12, size_z=0.1)
zip_dan_jia.children[i].assign_child_resource(jipian2, location=None)
for i in range(6):
jipian3 = ElectrodeSheet(name=f"zi_dan_jia3_jipian_{i}", size_x=12, size_y=12, size_z=0.1)
zip_dan_jia3.children[i].assign_child_resource(jipian3, location=None)
for i in range(6):
jipian4 = ElectrodeSheet(name=f"zi_dan_jia4_jipian_{i}", size_x=12, size_y=12, size_z=0.1)
zip_dan_jia4.children[i].assign_child_resource(jipian4, location=None)
for i in range(6):
jipian5 = ElectrodeSheet(name=f"zi_dan_jia5_jipian_{i}", size_x=12, size_y=12, size_z=0.1)
zip_dan_jia5.children[i].assign_child_resource(jipian5, location=None)
for i in range(6):
jipian6 = ElectrodeSheet(name=f"zi_dan_jia6_jipian_{i}", size_x=12, size_y=12, size_z=0.1)
zip_dan_jia6.children[i].assign_child_resource(jipian6, location=None)
for i in range(6):
jipian7 = ElectrodeSheet(name=f"zi_dan_jia7_jipian_{i}", size_x=12, size_y=12, size_z=0.1)
zip_dan_jia7.children[i].assign_child_resource(jipian7, location=None)
for i in range(6):
jipian8 = ElectrodeSheet(name=f"zi_dan_jia8_jipian_{i}", size_x=12, size_y=12, size_z=0.1)
zip_dan_jia8.children[i].assign_child_resource(jipian8, location=None)
"""======================================子弹夹============================================"""
#liaopan = TipBox64(name="liaopan")
"""======================================物料板============================================"""
#创建一个4*4的物料板
liaopan1 = MaterialPlate(name="liaopan1", size_x=120, size_y=100, size_z=10.0, fill=True)
deck.assign_child_resource(liaopan1, Coordinate(x=1010, y=50, z=0))
for i in range(16):
jipian_1 = ElectrodeSheet(name=f"{liaopan1.name}_jipian_{i}", size_x=12, size_y=12, size_z=0.1)
liaopan1.children[i].assign_child_resource(jipian_1, location=None)
liaopan2 = MaterialPlate(name="liaopan2", size_x=120, size_y=100, size_z=10.0, fill=True)
deck.assign_child_resource(liaopan2, Coordinate(x=1130, y=50, z=0))
liaopan3 = MaterialPlate(name="liaopan3", size_x=120, size_y=100, size_z=10.0, fill=True)
deck.assign_child_resource(liaopan3, Coordinate(x=1250, y=50, z=0))
liaopan4 = MaterialPlate(name="liaopan4", size_x=120, size_y=100, size_z=10.0, fill=True)
deck.assign_child_resource(liaopan4, Coordinate(x=1010, y=150, z=0))
for i in range(16):
jipian_4 = ElectrodeSheet(name=f"{liaopan4.name}_jipian_{i}", size_x=12, size_y=12, size_z=0.1)
liaopan4.children[i].assign_child_resource(jipian_4, location=None)
liaopan5 = MaterialPlate(name="liaopan5", size_x=120, size_y=100, size_z=10.0, fill=True)
deck.assign_child_resource(liaopan5, Coordinate(x=1130, y=150, z=0))
liaopan6 = MaterialPlate(name="liaopan6", size_x=120, size_y=100, size_z=10.0, fill=True)
deck.assign_child_resource(liaopan6, Coordinate(x=1250, y=150, z=0))
#liaopan.children[3].assign_child_resource(jipian, location=None)
"""======================================物料板============================================"""
"""======================================瓶架,移液枪============================================"""
# 在台面上放置 3x4 瓶架、6x2 瓶架 与 64孔移液枪头盒
bottle_rack_3x4 = BottleRack(
name="bottle_rack_3x4",
size_x=210.0,
size_y=140.0,
size_z=100.0,
num_items_x=3,
num_items_y=4,
position_spacing=35.0,
orientation="vertical",
)
deck.assign_child_resource(bottle_rack_3x4, Coordinate(x=100, y=200, z=0))
bottle_rack_6x2 = BottleRack(
name="bottle_rack_6x2",
size_x=120.0,
size_y=250.0,
size_z=100.0,
num_items_x=6,
num_items_y=2,
position_spacing=35.0,
orientation="vertical",
)
deck.assign_child_resource(bottle_rack_6x2, Coordinate(x=300, y=300, z=0))
bottle_rack_6x2_2 = BottleRack(
name="bottle_rack_6x2_2",
size_x=120.0,
size_y=250.0,
size_z=100.0,
num_items_x=6,
num_items_y=2,
position_spacing=35.0,
orientation="vertical",
)
deck.assign_child_resource(bottle_rack_6x2_2, Coordinate(x=430, y=300, z=0))
# 将 ElectrodeSheet 放满 3x4 与 6x2 的所有孔位
for idx in range(bottle_rack_3x4.num_items_x * bottle_rack_3x4.num_items_y):
sheet = ElectrodeSheet(name=f"sheet_3x4_{idx}", size_x=12, size_y=12, size_z=0.1)
bottle_rack_3x4.assign_child_resource(sheet, index=idx)
for idx in range(bottle_rack_6x2.num_items_x * bottle_rack_6x2.num_items_y):
sheet = ElectrodeSheet(name=f"sheet_6x2_{idx}", size_x=12, size_y=12, size_z=0.1)
bottle_rack_6x2.assign_child_resource(sheet, index=idx)
tip_box = TipBox64(name="tip_box_64")
deck.assign_child_resource(tip_box, Coordinate(x=300, y=100, z=0))
waste_tip_box = WasteTipBox(name="waste_tip_box")
deck.assign_child_resource(waste_tip_box, Coordinate(x=300, y=200, z=0))
"""======================================瓶架,移液枪============================================"""
print(deck)
from unilabos.resources.graphio import convert_resources_from_type
from unilabos.config.config import BasicConfig
BasicConfig.ak = "56bbed5b-6e30-438c-b06d-f69eaa63bb45"
BasicConfig.sk = "238222fe-0bf7-4350-a426-e5ced8011dcf"
from unilabos.app.web.client import http_client
resources = convert_resources_from_type([deck], [Resource])
def create_coin_cell_deck(name: str = "coin_cell_deck", size_x: float = 1000.0, size_y: float = 1000.0, size_z: float = 900.0) -> CoincellDeck:
"""创建并配置标准的纽扣电池组装工作站台面
# 检查序列化后的资源
json.dump({"nodes": resources, "links": []}, open("button_battery_decks_unilab.json", "w"), indent=2)
#print(resources)
http_client.remote_addr = "https://uni-lab.test.bohrium.com/api/v1"
http_client.resource_add(resources)
Args:
name: 台面名称
size_x: 长度 (mm)
size_y: 宽度 (mm)
size_z: 高度 (mm)
Returns:
已配置好的 CoincellDeck 对象
"""
deck = CoincellDeck(name=name, size_x=size_x, size_y=size_y, size_z=size_z)
deck.setup()
return deck

View File

@@ -1,33 +1,133 @@
import csv
import inspect
import json
import os
import threading
import time
import types
from datetime import datetime
from typing import Any, Dict, Optional
from pylabrobot.resources import Resource as PLRResource
from functools import wraps
from pylabrobot.resources import Deck, Resource as PLRResource
from unilabos_msgs.msg import Resource
from unilabos.device_comms.modbus_plc.client import ModbusTcpClient
from unilabos.devices.workstation.coin_cell_assembly.button_battery_station import MaterialHole, MaterialPlate
from unilabos.devices.workstation.workstation_base import WorkstationBase
from unilabos.device_comms.modbus_plc.client import TCPClient, ModbusNode, PLCWorkflow, ModbusWorkflow, WorkflowAction, BaseClient
from unilabos.device_comms.modbus_plc.modbus import DeviceType, Base as ModbusNodeBase, DataType, WorderOrder
from unilabos.devices.workstation.coin_cell_assembly.button_battery_station import *
from unilabos.devices.workstation.coin_cell_assembly.YB_YH_materials import *
from unilabos.ros.nodes.base_device_node import ROS2DeviceNode, BaseROS2DeviceNode
from unilabos.ros.nodes.presets.workstation import ROS2WorkstationNode
from unilabos.devices.workstation.coin_cell_assembly.YB_YH_materials import CoincellDeck
from unilabos.resources.graphio import convert_resources_to_type
from unilabos.utils.log import logger
def _ensure_modbus_slave_kw_alias(modbus_client):
if modbus_client is None:
return
method_names = [
"read_coils",
"write_coils",
"write_coil",
"read_discrete_inputs",
"read_holding_registers",
"write_register",
"write_registers",
]
def _wrap(func):
signature = inspect.signature(func)
has_var_kwargs = any(param.kind == param.VAR_KEYWORD for param in signature.parameters.values())
accepts_unit = has_var_kwargs or "unit" in signature.parameters
accepts_slave = has_var_kwargs or "slave" in signature.parameters
@wraps(func)
def _wrapped(self, *args, **kwargs):
if "slave" in kwargs and not accepts_slave:
slave_value = kwargs.pop("slave")
if accepts_unit and "unit" not in kwargs:
kwargs["unit"] = slave_value
if "unit" in kwargs and not accepts_unit:
unit_value = kwargs.pop("unit")
if accepts_slave and "slave" not in kwargs:
kwargs["slave"] = unit_value
return func(self, *args, **kwargs)
_wrapped._has_slave_alias = True
return _wrapped
for name in method_names:
if not hasattr(modbus_client, name):
continue
bound_method = getattr(modbus_client, name)
func = getattr(bound_method, "__func__", None)
if func is None:
continue
if getattr(func, "_has_slave_alias", False):
continue
wrapped = _wrap(func)
setattr(modbus_client, name, types.MethodType(wrapped, modbus_client))
def _coerce_deck_input(deck: Any) -> Optional[Deck]:
if deck is None:
return None
if isinstance(deck, Deck):
return deck
if isinstance(deck, PLRResource):
return deck if isinstance(deck, Deck) else None
candidates = None
if isinstance(deck, dict):
if "nodes" in deck and isinstance(deck["nodes"], list):
candidates = deck["nodes"]
else:
candidates = [deck]
elif isinstance(deck, list):
candidates = deck
if candidates is None:
return None
try:
converted = convert_resources_to_type(resources_list=candidates, resource_type=Deck)
if isinstance(converted, Deck):
return converted
if isinstance(converted, list):
for item in converted:
if isinstance(item, Deck):
return item
except Exception as exc:
logger.warning(f"deck 转换 Deck 失败: {exc}")
return None
#构建物料系统
class CoinCellAssemblyWorkstation(WorkstationBase):
def __init__(
self,
deck: CoincellDeck,
address: str = "192.168.1.20",
deck: Deck=None,
address: str = "172.21.32.111",
port: str = "502",
debug_mode: bool = True,
debug_mode: bool = False,
*args,
**kwargs,
):
if deck is None and "deck" in kwargs:
deck = kwargs.pop("deck")
else:
kwargs.pop("deck", None)
normalized_deck = _coerce_deck_input(deck)
if deck is None and isinstance(normalized_deck, Deck):
deck = normalized_deck
super().__init__(
#桌子
deck=deck,
@@ -35,10 +135,22 @@ class CoinCellAssemblyWorkstation(WorkstationBase):
**kwargs,
)
self.debug_mode = debug_mode
self.deck = deck
# 如果没有传入 deck则创建标准配置的 deck
if self.deck is None:
self.deck = CoincellDeck(size_x=1000, size_y=1000, size_z=900, setup=True)
else:
# 如果传入了 deck 但还没有 setup可以选择是否 setup
if self.deck is not None and len(self.deck.children) == 0:
# deck 为空,执行 setup
self.deck.setup()
# 否则使用传入的 deck可能已经配置好了
self.deck = self.deck
""" 连接初始化 """
modbus_client = TCPClient(addr=address, port=port)
print("modbus_client", modbus_client)
_ensure_modbus_slave_kw_alias(modbus_client.client)
if not debug_mode:
modbus_client.client.connect()
count = 100
@@ -60,9 +172,8 @@ class CoinCellAssemblyWorkstation(WorkstationBase):
self.csv_export_thread = None
self.csv_export_running = False
self.csv_export_file = None
self.coin_num_N = 0 #已组装电池数量
#创建一个物料台面,包含两个极片板
#self.deck = create_a_coin_cell_deck()
#self._ros_node.update_resource(self.deck)
#ROS2DeviceNode.run_async_func(self._ros_node.update_resource, True, **{
@@ -606,7 +717,8 @@ class CoinCellAssemblyWorkstation(WorkstationBase):
print("waiting for start_cmd")
time.sleep(1)
def func_pack_send_bottle_num(self, bottle_num: int):
def func_pack_send_bottle_num(self, bottle_num):
bottle_num = int(bottle_num)
#发送电解液平台数
print("启动")
while (self._unilab_rece_electrolyte_bottle_num()) == False:
@@ -654,16 +766,25 @@ class CoinCellAssemblyWorkstation(WorkstationBase):
# self.success = True
# return self.success
def func_pack_send_msg_cmd(self, elec_use_num) -> bool:
def func_pack_send_msg_cmd(self, elec_use_num, elec_vol, assembly_type, assembly_pressure) -> bool:
"""UNILAB写参数"""
while (self.request_rec_msg_status) == False:
print("wait for request_rec_msg_status to True")
time.sleep(1)
self.success = False
#self._unilab_send_msg_electrolyte_num(elec_num)
time.sleep(1)
#设置平行样数目
self._unilab_send_msg_electrolyte_use_num(elec_use_num)
time.sleep(1)
#发送电解液加注量
self._unilab_send_msg_electrolyte_vol(elec_vol)
time.sleep(1)
#发送电解液组装类型
self._unilab_send_msg_assembly_type(assembly_type)
time.sleep(1)
#发送电池压制力
self._unilab_send_msg_assembly_pressure(assembly_pressure)
time.sleep(1)
self._unilab_send_msg_succ_cmd(True)
time.sleep(1)
while (self.request_rec_msg_status) == True:
@@ -697,6 +818,23 @@ class CoinCellAssemblyWorkstation(WorkstationBase):
print("data_electrolyte_code", data_electrolyte_code)
print("data_coin_cell_code", data_coin_cell_code)
#接收完信息后读取完毕标志位置True
liaopan3 = self.deck.get_resource("\u7535\u6c60\u6599\u76d8")
#把物料解绑后放到另一盘上
battery = ElectrodeSheet(name=f"battery_{self.coin_num_N}", size_x=14, size_y=14, size_z=2)
battery._unilabos_state = {
"electrolyte_name": data_coin_cell_code,
"data_electrolyte_code": data_electrolyte_code,
"open_circuit_voltage": data_open_circuit_voltage,
"assembly_pressure": data_assembly_pressure,
"electrolyte_volume": data_electrolyte_volume
}
liaopan3.children[self.coin_num_N].assign_child_resource(battery, location=None)
#print(jipian2.parent)
ROS2DeviceNode.run_async_func(self._ros_node.update_resource, True, **{
"resources": [self.deck]
})
self._unilab_rec_msg_succ_cmd(True)
time.sleep(1)
#等待允许读取标志位置False
@@ -754,11 +892,25 @@ class CoinCellAssemblyWorkstation(WorkstationBase):
self.success = True
return self.success
def qiming_coin_cell_code(self, fujipian_panshu:int, fujipian_juzhendianwei:int=0, gemopanshu:int=0, gemo_juzhendianwei:int=0, lvbodian:bool=True, battery_pressure_mode:bool=True, battery_pressure:int=4000, battery_clean_ignore:bool=False) -> bool:
self.success = False
self.client.use_node('REG_MSG_NE_PLATE_NUM').write(fujipian_panshu)
self.client.use_node('REG_MSG_NE_PLATE_MATRIX').write(fujipian_juzhendianwei)
self.client.use_node('REG_MSG_SEPARATOR_PLATE_NUM').write(gemopanshu)
self.client.use_node('REG_MSG_SEPARATOR_PLATE_MATRIX').write(gemo_juzhendianwei)
self.client.use_node('COIL_ALUMINUM_FOIL').write(not lvbodian)
self.client.use_node('REG_MSG_PRESS_MODE').write(not battery_pressure_mode)
# self.client.use_node('REG_MSG_ASSEMBLY_PRESSURE').write(battery_pressure)
self.client.use_node('REG_MSG_BATTERY_CLEAN_IGNORE').write(battery_clean_ignore)
self.success = True
return self.success
def func_allpack_cmd(self, elec_num, elec_use_num, file_path: str="D:\\coin_cell_data") -> bool:
def func_allpack_cmd(self, elec_num, elec_use_num, elec_vol:int=50, assembly_type:int=7, assembly_pressure:int=4200, file_path: str="C:\\Users\\67484\\Desktop") -> bool:
elec_num, elec_use_num, elec_vol, assembly_type, assembly_pressure = int(elec_num), int(elec_use_num), int(elec_vol), int(assembly_type), int(assembly_pressure)
summary_csv_file = os.path.join(file_path, "duandian.csv")
# 如果断点文件存在,先读取之前的进度
if os.path.exists(summary_csv_file):
read_status_flag = True
with open(summary_csv_file, 'r', newline='', encoding='utf-8') as csvfile:
@@ -784,54 +936,38 @@ class CoinCellAssemblyWorkstation(WorkstationBase):
elec_num_N = 0
elec_use_num_N = 0
coin_num_N = 0
print(f"剩余电解液瓶数: {elec_num}, 已组装电池数: {elec_use_num}")
for i in range(20):
print(f"剩余电解液瓶数: {elec_num}, 已组装电池数: {elec_use_num}")
print(f"剩余电解液瓶数: {type(elec_num)}, 已组装电池数: {type(elec_use_num)}")
print(f"剩余电解液瓶数: {type(int(elec_num))}, 已组装电池数: {type(int(elec_use_num))}")
#如果是第一次运行,则进行初始化、切换自动、启动, 如果是断点重启则跳过。
if read_status_flag == False:
pass
#初始化
self.func_pack_device_init()
#self.func_pack_device_init()
#切换自动
self.func_pack_device_auto()
#self.func_pack_device_auto()
#启动,小车收回
self.func_pack_device_start()
#self.func_pack_device_start()
#发送电解液瓶数量,启动搬运,多搬运没事
self.func_pack_send_bottle_num(elec_num)
#self.func_pack_send_bottle_num(elec_num)
last_i = elec_num_N
last_j = elec_use_num_N
for i in range(last_i, elec_num):
print(f"开始第{last_i+i+1}瓶电解液的组装")
#第一个循环从上次断点继续后续循环从0开始
j_start = last_j if i == last_i else 0
self.func_pack_send_msg_cmd(elec_use_num-j_start)
self.func_pack_send_msg_cmd(elec_use_num-j_start, elec_vol, assembly_type, assembly_pressure)
for j in range(j_start, elec_use_num):
print(f"开始第{last_i+i+1}瓶电解液的第{j+j_start+1}个电池组装")
#读取电池组装数据并存入csv
self.func_pack_get_msg_cmd(file_path)
time.sleep(1)
#这里定义物料系统
# TODO:读完再将电池数加一还是进入循环就将电池数加一需要考虑
liaopan1 = self.deck.get_resource("liaopan1")
liaopan4 = self.deck.get_resource("liaopan4")
jipian1 = liaopan1.children[coin_num_N].children[0]
jipian4 = liaopan4.children[coin_num_N].children[0]
#print(jipian1)
#从料盘上去物料解绑后放到另一盘上
jipian1.parent.unassign_child_resource(jipian1)
jipian4.parent.unassign_child_resource(jipian4)
#print(jipian2.parent)
battery = Battery(name = f"battery_{coin_num_N}")
battery.assign_child_resource(jipian1, location=None)
battery.assign_child_resource(jipian4, location=None)
zidanjia6 = self.deck.get_resource("zi_dan_jia6")
zidanjia6.children[0].assign_child_resource(battery, location=None)
# 生成断点文件
# 生成包含elec_num_N、coin_num_N、timestamp的CSV文件
@@ -842,6 +978,7 @@ class CoinCellAssemblyWorkstation(WorkstationBase):
writer.writerow([elec_num, elec_use_num, elec_num_N, elec_use_num_N, coin_num_N, timestamp])
csvfile.flush()
coin_num_N += 1
self.coin_num_N = coin_num_N
elec_use_num_N += 1
elec_num_N += 1
elec_use_num_N = 0
@@ -878,34 +1015,25 @@ class CoinCellAssemblyWorkstation(WorkstationBase):
def fun_wuliao_test(self) -> bool:
#找到data_init中构建的2个物料盘
#liaopan1 = self.deck.get_resource("liaopan1")
#liaopan4 = self.deck.get_resource("liaopan4")
#for coin_num_N in range(16):
# liaopan1 = self.deck.get_resource("liaopan1")
# liaopan4 = self.deck.get_resource("liaopan4")
# jipian1 = liaopan1.children[coin_num_N].children[0]
# jipian4 = liaopan4.children[coin_num_N].children[0]
# #print(jipian1)
# #从料盘上去物料解绑后放到另一盘上
# jipian1.parent.unassign_child_resource(jipian1)
# jipian4.parent.unassign_child_resource(jipian4)
#
# #print(jipian2.parent)
# battery = Battery(name = f"battery_{coin_num_N}")
# battery.assign_child_resource(jipian1, location=None)
# battery.assign_child_resource(jipian4, location=None)
#
# zidanjia6 = self.deck.get_resource("zi_dan_jia6")
# zidanjia6.children[0].assign_child_resource(battery, location=None)
# ROS2DeviceNode.run_async_func(self._ros_node.update_resource, True, **{
# "resources": [self.deck]
# })
# time.sleep(2)
for i in range(20):
print(f"输出{i}")
time.sleep(2)
liaopan3 = self.deck.get_resource("\u7535\u6c60\u6599\u76d8")
for i in range(16):
battery = ElectrodeSheet(name=f"battery_{i}", size_x=16, size_y=16, size_z=2)
battery._unilabos_state = {
"diameter": 20.0,
"height": 20.0,
"assembly_pressure": i,
"electrolyte_volume": 20.0,
"electrolyte_name": f"DP{i}"
}
liaopan3.children[i].assign_child_resource(battery, location=None)
ROS2DeviceNode.run_async_func(self._ros_node.update_resource, True, **{
"resources": [self.deck]
})
# for i in range(40):
# print(f"fun_wuliao_test 运行结束{i}")
# time.sleep(1)
# time.sleep(40)
# 数据读取与输出
def func_read_data_and_output(self, file_path: str="D:\\coin_cell_data"):
# 检查CSV导出是否正在运行已运行则跳出防止同时启动两个while循环
@@ -1012,7 +1140,7 @@ class CoinCellAssemblyWorkstation(WorkstationBase):
# else:
# print("子弹夹洞位0没有极片")
#
# #把电解液从瓶中取到电池夹子中
# # TODO:#把电解液从瓶中取到电池夹子中
# battery_site = deck.get_resource("battery_press_1")
# clip_magazine_battery = deck.get_resource("clip_magazine_battery")
# if battery_site.has_battery():
@@ -1102,41 +1230,10 @@ class CoinCellAssemblyWorkstation(WorkstationBase):
'''
if __name__ == "__main__":
from pylabrobot.resources import Resource
Coin_Cell = CoinCellAssemblyWorkstation(Resource("1", 1, 1, 1), debug_mode=True)
#Coin_Cell.func_pack_device_init()
#Coin_Cell.func_pack_device_auto()
#Coin_Cell.func_pack_device_start()
#Coin_Cell.func_pack_send_bottle_num(2)
#Coin_Cell.func_pack_send_msg_cmd(2)
#Coin_Cell.func_pack_get_msg_cmd()
#Coin_Cell.func_pack_get_msg_cmd()
#Coin_Cell.func_pack_send_finished_cmd()
#
#Coin_Cell.func_allpack_cmd(3, 2)
#print(Coin_Cell.data_stack_vision_code)
#print("success")
#创建一个物料台面
#deck = create_a_coin_cell_deck()
##在台面上找到料盘和极片
#liaopan1 = deck.get_resource("liaopan1")
#liaopan2 = deck.get_resource("liaopan2")
#jipian1 = liaopan1.children[1].children[0]
#
##print(jipian1)
##把物料解绑后放到另一盘上
#jipian1.parent.unassign_child_resource(jipian1)
#liaopan2.children[1].assign_child_resource(jipian1, location=None)
##print(jipian2.parent)
from unilabos.resources.graphio import resource_ulab_to_plr, convert_resources_to_type
with open("./button_battery_decks_unilab.json", "r", encoding="utf-8") as f:
bioyond_resources_unilab = json.load(f)
print(f"成功读取 JSON 文件,包含 {len(bioyond_resources_unilab)} 个资源")
ulab_resources = convert_resources_to_type(bioyond_resources_unilab, List[PLRResource])
print(f"转换结果类型: {type(ulab_resources)}")
print(ulab_resources)
# 简单测试
workstation = CoinCellAssemblyWorkstation()
workstation.qiming_coin_cell_code(fujipian_panshu=1, fujipian_juzhendianwei=2, gemopanshu=3, gemo_juzhendianwei=4, lvbodian=False, battery_pressure_mode=False, battery_pressure=4200, battery_clean_ignore=False)
print(f"工作站创建成功: {workstation.deck.name}")
print(f"料盘数量: {len(workstation.deck.children)}")

View File

@@ -0,0 +1,64 @@
Name,DataType,InitValue,Comment,Attribute,DeviceType,Address,
COIL_SYS_START_CMD,BOOL,,,,coil,8010,
COIL_SYS_STOP_CMD,BOOL,,,,coil,8020,
COIL_SYS_RESET_CMD,BOOL,,,,coil,8030,
COIL_SYS_HAND_CMD,BOOL,,,,coil,8040,
COIL_SYS_AUTO_CMD,BOOL,,,,coil,8050,
COIL_SYS_INIT_CMD,BOOL,,,,coil,8060,
COIL_UNILAB_SEND_MSG_SUCC_CMD,BOOL,,,,coil,8700,
COIL_UNILAB_REC_MSG_SUCC_CMD,BOOL,,,,coil,8710,unilab_rec_msg_succ_cmd
COIL_SYS_START_STATUS,BOOL,,,,coil,8210,
COIL_SYS_STOP_STATUS,BOOL,,,,coil,8220,
COIL_SYS_RESET_STATUS,BOOL,,,,coil,8230,
COIL_SYS_HAND_STATUS,BOOL,,,,coil,8240,
COIL_SYS_AUTO_STATUS,BOOL,,,,coil,8250,
COIL_SYS_INIT_STATUS,BOOL,,,,coil,8260,
COIL_REQUEST_REC_MSG_STATUS,BOOL,,,,coil,8500,
COIL_REQUEST_SEND_MSG_STATUS,BOOL,,,,coil,8510,request_send_msg_status
REG_MSG_ELECTROLYTE_USE_NUM,INT16,,,,hold_register,11000,
REG_MSG_ELECTROLYTE_NUM,INT16,,,,hold_register,11002,unilab_send_msg_electrolyte_num
REG_MSG_ELECTROLYTE_VOLUME,INT16,,,,hold_register,11004,unilab_send_msg_electrolyte_vol
REG_MSG_ASSEMBLY_TYPE,INT16,,,,hold_register,11006,unilab_send_msg_assembly_type
REG_MSG_ASSEMBLY_PRESSURE,INT16,,,,hold_register,11008,unilab_send_msg_assembly_pressure
REG_DATA_ASSEMBLY_COIN_CELL_NUM,INT16,,,,hold_register,10000,data_assembly_coin_cell_num
REG_DATA_OPEN_CIRCUIT_VOLTAGE,FLOAT32,,,,hold_register,10002,data_open_circuit_voltage
REG_DATA_AXIS_X_POS,FLOAT32,,,,hold_register,10004,
REG_DATA_AXIS_Y_POS,FLOAT32,,,,hold_register,10006,
REG_DATA_AXIS_Z_POS,FLOAT32,,,,hold_register,10008,
REG_DATA_POLE_WEIGHT,FLOAT32,,,,hold_register,10010,data_pole_weight
REG_DATA_ASSEMBLY_PER_TIME,FLOAT32,,,,hold_register,10012,data_assembly_time
REG_DATA_ASSEMBLY_PRESSURE,INT16,,,,hold_register,10014,data_assembly_pressure
REG_DATA_ELECTROLYTE_VOLUME,INT16,,,,hold_register,10016,data_electrolyte_volume
REG_DATA_COIN_NUM,INT16,,,,hold_register,10018,data_coin_num
REG_DATA_ELECTROLYTE_CODE,STRING,,,,hold_register,10020,data_electrolyte_code()
REG_DATA_COIN_CELL_CODE,STRING,,,,hold_register,10030,data_coin_cell_code()
REG_DATA_STACK_VISON_CODE,STRING,,,,hold_register,12004,data_stack_vision_code()
REG_DATA_GLOVE_BOX_PRESSURE,FLOAT32,,,,hold_register,10050,data_glove_box_pressure
REG_DATA_GLOVE_BOX_WATER_CONTENT,FLOAT32,,,,hold_register,10052,data_glove_box_water_content
REG_DATA_GLOVE_BOX_O2_CONTENT,FLOAT32,,,,hold_register,10054,data_glove_box_o2_content
UNILAB_SEND_ELECTROLYTE_BOTTLE_NUM,BOOL,,,,coil,8720,
UNILAB_RECE_ELECTROLYTE_BOTTLE_NUM,BOOL,,,,coil,8520,
REG_MSG_ELECTROLYTE_NUM_USED,INT16,,,,hold_register,496,
REG_DATA_ELECTROLYTE_USE_NUM,INT16,,,,hold_register,10000,
UNILAB_SEND_FINISHED_CMD,BOOL,,,,coil,8730,
UNILAB_RECE_FINISHED_CMD,BOOL,,,,coil,8530,
REG_DATA_ASSEMBLY_TYPE,INT16,,,,hold_register,10018,ASSEMBLY_TYPE7or8
COIL_ALUMINUM_FOIL,BOOL,,使用铝箔垫,,coil,8340,
REG_MSG_NE_PLATE_MATRIX,INT16,,负极片矩阵点位,,hold_register,440,
REG_MSG_SEPARATOR_PLATE_MATRIX,INT16,,隔膜矩阵点位,,hold_register,450,
REG_MSG_TIP_BOX_MATRIX,INT16,,移液枪头矩阵点位,,hold_register,480,
REG_MSG_NE_PLATE_NUM,INT16,,负极片盘数,,hold_register,443,
REG_MSG_SEPARATOR_PLATE_NUM,INT16,,隔膜盘数,,hold_register,453,
REG_MSG_PRESS_MODE,BOOL,,压制模式false:压力检测模式True:距离模式),,coil,8360,电池压制模式
,,,,,,,
,BOOL,,视觉对位false:使用true:忽略),,coil,8300,视觉对位
,BOOL,,复检false:使用true:忽略),,coil,8310,视觉复检
,BOOL,,手套箱_左仓false:使用true:忽略),,coil,8320,手套箱左仓
,BOOL,,手套箱_右仓false:使用true:忽略),,coil,8420,手套箱右仓
,BOOL,,真空检知false:使用true:忽略),,coil,8350,真空检知
,BOOL,,电解液添加模式false:单次滴液true:二次滴液),,coil,8370,滴液模式
,BOOL,,正极片称重false:使用true:忽略),,coil,8380,正极片称重
,BOOL,,正负极片组装方式false:正装true:倒装),,coil,8390,正负极反装
,BOOL,,压制清洁false:使用true:忽略),,coil,8400,压制清洁
,BOOL,,物料盘摆盘方式false:水平摆盘true:堆叠摆盘),,coil,8410,负极片摆盘方式
REG_MSG_BATTERY_CLEAN_IGNORE,BOOL,,忽略电池清洁false:使用true:忽略),,coil,8460,
1 Name DataType InitValue Comment Attribute DeviceType Address
2 COIL_SYS_START_CMD BOOL coil 8010
3 COIL_SYS_STOP_CMD BOOL coil 8020
4 COIL_SYS_RESET_CMD BOOL coil 8030
5 COIL_SYS_HAND_CMD BOOL coil 8040
6 COIL_SYS_AUTO_CMD BOOL coil 8050
7 COIL_SYS_INIT_CMD BOOL coil 8060
8 COIL_UNILAB_SEND_MSG_SUCC_CMD BOOL coil 8700
9 COIL_UNILAB_REC_MSG_SUCC_CMD BOOL coil 8710 unilab_rec_msg_succ_cmd
10 COIL_SYS_START_STATUS BOOL coil 8210
11 COIL_SYS_STOP_STATUS BOOL coil 8220
12 COIL_SYS_RESET_STATUS BOOL coil 8230
13 COIL_SYS_HAND_STATUS BOOL coil 8240
14 COIL_SYS_AUTO_STATUS BOOL coil 8250
15 COIL_SYS_INIT_STATUS BOOL coil 8260
16 COIL_REQUEST_REC_MSG_STATUS BOOL coil 8500
17 COIL_REQUEST_SEND_MSG_STATUS BOOL coil 8510 request_send_msg_status
18 REG_MSG_ELECTROLYTE_USE_NUM INT16 hold_register 11000
19 REG_MSG_ELECTROLYTE_NUM INT16 hold_register 11002 unilab_send_msg_electrolyte_num
20 REG_MSG_ELECTROLYTE_VOLUME INT16 hold_register 11004 unilab_send_msg_electrolyte_vol
21 REG_MSG_ASSEMBLY_TYPE INT16 hold_register 11006 unilab_send_msg_assembly_type
22 REG_MSG_ASSEMBLY_PRESSURE INT16 hold_register 11008 unilab_send_msg_assembly_pressure
23 REG_DATA_ASSEMBLY_COIN_CELL_NUM INT16 hold_register 10000 data_assembly_coin_cell_num
24 REG_DATA_OPEN_CIRCUIT_VOLTAGE FLOAT32 hold_register 10002 data_open_circuit_voltage
25 REG_DATA_AXIS_X_POS FLOAT32 hold_register 10004
26 REG_DATA_AXIS_Y_POS FLOAT32 hold_register 10006
27 REG_DATA_AXIS_Z_POS FLOAT32 hold_register 10008
28 REG_DATA_POLE_WEIGHT FLOAT32 hold_register 10010 data_pole_weight
29 REG_DATA_ASSEMBLY_PER_TIME FLOAT32 hold_register 10012 data_assembly_time
30 REG_DATA_ASSEMBLY_PRESSURE INT16 hold_register 10014 data_assembly_pressure
31 REG_DATA_ELECTROLYTE_VOLUME INT16 hold_register 10016 data_electrolyte_volume
32 REG_DATA_COIN_NUM INT16 hold_register 10018 data_coin_num
33 REG_DATA_ELECTROLYTE_CODE STRING hold_register 10020 data_electrolyte_code()
34 REG_DATA_COIN_CELL_CODE STRING hold_register 10030 data_coin_cell_code()
35 REG_DATA_STACK_VISON_CODE STRING hold_register 12004 data_stack_vision_code()
36 REG_DATA_GLOVE_BOX_PRESSURE FLOAT32 hold_register 10050 data_glove_box_pressure
37 REG_DATA_GLOVE_BOX_WATER_CONTENT FLOAT32 hold_register 10052 data_glove_box_water_content
38 REG_DATA_GLOVE_BOX_O2_CONTENT FLOAT32 hold_register 10054 data_glove_box_o2_content
39 UNILAB_SEND_ELECTROLYTE_BOTTLE_NUM BOOL coil 8720
40 UNILAB_RECE_ELECTROLYTE_BOTTLE_NUM BOOL coil 8520
41 REG_MSG_ELECTROLYTE_NUM_USED INT16 hold_register 496
42 REG_DATA_ELECTROLYTE_USE_NUM INT16 hold_register 10000
43 UNILAB_SEND_FINISHED_CMD BOOL coil 8730
44 UNILAB_RECE_FINISHED_CMD BOOL coil 8530
45 REG_DATA_ASSEMBLY_TYPE INT16 hold_register 10018 ASSEMBLY_TYPE7or8
46 COIL_ALUMINUM_FOIL BOOL 使用铝箔垫 coil 8340
47 REG_MSG_NE_PLATE_MATRIX INT16 负极片矩阵点位 hold_register 440
48 REG_MSG_SEPARATOR_PLATE_MATRIX INT16 隔膜矩阵点位 hold_register 450
49 REG_MSG_TIP_BOX_MATRIX INT16 移液枪头矩阵点位 hold_register 480
50 REG_MSG_NE_PLATE_NUM INT16 负极片盘数 hold_register 443
51 REG_MSG_SEPARATOR_PLATE_NUM INT16 隔膜盘数 hold_register 453
52 REG_MSG_PRESS_MODE BOOL 压制模式(false:压力检测模式,True:距离模式) coil 8360 电池压制模式
53
54 BOOL 视觉对位(false:使用,true:忽略) coil 8300 视觉对位
55 BOOL 复检(false:使用,true:忽略) coil 8310 视觉复检
56 BOOL 手套箱_左仓(false:使用,true:忽略) coil 8320 手套箱左仓
57 BOOL 手套箱_右仓(false:使用,true:忽略) coil 8420 手套箱右仓
58 BOOL 真空检知(false:使用,true:忽略) coil 8350 真空检知
59 BOOL 电解液添加模式(false:单次滴液,true:二次滴液) coil 8370 滴液模式
60 BOOL 正极片称重(false:使用,true:忽略) coil 8380 正极片称重
61 BOOL 正负极片组装方式(false:正装,true:倒装) coil 8390 正负极反装
62 BOOL 压制清洁(false:使用,true:忽略) coil 8400 压制清洁
63 BOOL 物料盘摆盘方式(false:水平摆盘,true:堆叠摆盘) coil 8410 负极片摆盘方式
64 REG_MSG_BATTERY_CLEAN_IGNORE BOOL 忽略电池清洁(false:使用,true:忽略) coil 8460

View File

@@ -0,0 +1,38 @@
{
"nodes": [
{
"id": "bioyond_cell_workstation",
"name": "配液分液工站",
"children": [
],
"parent": null,
"type": "device",
"class": "bioyond_cell",
"config": {
"protocol_type": [],
"station_resource": {}
},
"data": {}
},
{
"id": "BatteryStation",
"name": "扣电工作站",
"children": [
"coin_cell_deck"
],
"parent": null,
"type": "device",
"class": "coincellassemblyworkstation_device",
"position": {
"x": 600,
"y": 400,
"z": 0
},
"config": {
"debug_mode": false,
"protocol_type": []
}
}
],
"links": []
}

View File

@@ -171,7 +171,6 @@ class WorkstationBase(ABC):
def post_init(self, ros_node: ROS2WorkstationNode) -> None:
# 初始化物料系统
self._ros_node = ros_node
self._ros_node.update_resource([self.deck])
def _build_resource_mappings(self, deck: Deck):
"""递归构建资源映射"""

File diff suppressed because it is too large Load Diff

View File

@@ -1,231 +1,3 @@
hplc.agilent:
category:
- characterization_chromatic
class:
action_value_mappings:
auto-check_status:
feedback: {}
goal: {}
goal_default: {}
handles: {}
placeholder_keys: {}
result: {}
schema:
description: 检查安捷伦HPLC设备状态的函数。用于监控设备的运行状态、连接状态、错误信息等关键指标。该函数定期查询设备状态确保系统稳定运行及时发现和报告设备异常。适用于自动化流程中的设备监控、故障诊断、系统维护等场景。
properties:
feedback: {}
goal:
properties: {}
required: []
type: object
result: {}
required:
- goal
title: check_status参数
type: object
type: UniLabJsonCommand
auto-extract_data_from_txt:
feedback: {}
goal: {}
goal_default:
file_path: null
handles: {}
placeholder_keys: {}
result: {}
schema:
description: 从文本文件中提取分析数据的函数。用于解析安捷伦HPLC生成的结果文件提取峰面积、保留时间、浓度等关键分析数据。支持多种文件格式的自动识别和数据结构化处理为后续数据分析和报告生成提供标准化的数据格式。适用于批量数据处理、结果验证、质量控制等分析工作流程。
properties:
feedback: {}
goal:
properties:
file_path:
type: string
required:
- file_path
type: object
result: {}
required:
- goal
title: extract_data_from_txt参数
type: object
type: UniLabJsonCommand
auto-start_sequence:
feedback: {}
goal: {}
goal_default:
params: null
resource: null
wf_name: null
handles: {}
placeholder_keys: {}
result: {}
schema:
description: 启动安捷伦HPLC分析序列的函数。用于执行预定义的分析方法序列包括样品进样、色谱分离、检测等完整的分析流程。支持参数配置、资源分配、工作流程管理等功能实现全自动的样品分析。适用于批量样品处理、标准化分析、质量检测等需要连续自动分析的应用场景。
properties:
feedback: {}
goal:
properties:
params:
type: string
resource:
type: object
wf_name:
type: string
required:
- wf_name
type: object
result: {}
required:
- goal
title: start_sequence参数
type: object
type: UniLabJsonCommand
auto-try_close_sub_device:
feedback: {}
goal: {}
goal_default:
device_name: null
handles: {}
placeholder_keys: {}
result: {}
schema:
description: 尝试关闭HPLC子设备的函数。用于安全地关闭泵、检测器、进样器等各个子模块确保设备正常断开连接并保护硬件安全。该函数提供错误处理和状态确认机制避免强制关闭可能造成的设备损坏。适用于设备维护、系统重启、紧急停机等需要安全关闭设备的场景。
properties:
feedback: {}
goal:
properties:
device_name:
type: string
required: []
type: object
result: {}
required:
- goal
title: try_close_sub_device参数
type: object
type: UniLabJsonCommand
auto-try_open_sub_device:
feedback: {}
goal: {}
goal_default:
device_name: null
handles: {}
placeholder_keys: {}
result: {}
schema:
description: 尝试打开HPLC子设备的函数。用于初始化和连接泵、检测器、进样器等各个子模块建立设备通信并进行自检。该函数提供连接验证和错误恢复机制确保子设备正常启动并准备就绪。适用于设备初始化、系统启动、设备重连等需要建立设备连接的场景。
properties:
feedback: {}
goal:
properties:
device_name:
type: string
required: []
type: object
result: {}
required:
- goal
title: try_open_sub_device参数
type: object
type: UniLabJsonCommand
execute_command_from_outer:
feedback: {}
goal:
command: command
goal_default:
command: ''
handles: {}
result:
success: success
schema:
description: ''
properties:
feedback:
properties:
status:
type: string
required:
- status
title: SendCmd_Feedback
type: object
goal:
properties:
command:
type: string
required:
- command
title: SendCmd_Goal
type: object
result:
properties:
return_info:
type: string
success:
type: boolean
required:
- return_info
- success
title: SendCmd_Result
type: object
required:
- goal
title: SendCmd
type: object
type: SendCmd
module: unilabos.devices.hplc.AgilentHPLC:HPLCDriver
status_types:
could_run: bool
data_file: String
device_status: str
driver_init_ok: bool
finish_status: str
is_running: bool
status_text: str
success: bool
type: python
config_info: []
description: 安捷伦高效液相色谱HPLC分析设备用于复杂化合物的分离、检测和定量分析。该设备通过UI自动化技术控制安捷伦ChemStation软件实现全自动的样品分析流程。具备序列启动、设备状态监控、数据文件提取、结果处理等功能。支持多样品批量处理和实时状态反馈适用于药物分析、环境检测、食品安全、化学研究等需要高精度色谱分析的实验室应用。
handles: []
icon: ''
init_param_schema:
config:
properties:
driver_debug:
default: false
type: string
required: []
type: object
data:
properties:
could_run:
type: boolean
data_file:
items:
type: string
type: array
device_status:
type: string
driver_init_ok:
type: boolean
finish_status:
type: string
is_running:
type: boolean
status_text:
type: string
success:
type: boolean
required:
- status_text
- device_status
- could_run
- driver_init_ok
- is_running
- success
- finish_status
- data_file
type: object
version: 1.0.0
hplc.agilent-zhida:
category:
- characterization_chromatic

View File

@@ -1,194 +1 @@
raman.home_made:
category:
- characterization_optic
class:
action_value_mappings:
auto-ccd_time:
feedback: {}
goal: {}
goal_default:
int_time: null
handles: {}
placeholder_keys: {}
result: {}
schema:
description: 设置CCD检测器积分时间的函数。用于配置拉曼光谱仪的信号采集时间控制光谱数据的质量和信噪比。较长的积分时间可获得更高的信号强度和更好的光谱质量但会增加测量时间。该函数允许根据样品特性和测量要求动态调整检测参数优化测量效果。
properties:
feedback: {}
goal:
properties:
int_time:
type: string
required:
- int_time
type: object
result: {}
required:
- goal
title: ccd_time参数
type: object
type: UniLabJsonCommand
auto-laser_on_power:
feedback: {}
goal: {}
goal_default:
output_voltage_laser: null
handles: {}
placeholder_keys: {}
result: {}
schema:
description: 设置激光器输出功率的函数。用于控制拉曼光谱仪激光器的功率输出,调节激光强度以适应不同样品的测量需求。适当的激光功率能够获得良好的拉曼信号同时避免样品损伤。该函数支持精确的功率控制,确保测量结果的稳定性和重现性。
properties:
feedback: {}
goal:
properties:
output_voltage_laser:
type: string
required:
- output_voltage_laser
type: object
result: {}
required:
- goal
title: laser_on_power参数
type: object
type: UniLabJsonCommand
auto-raman_without_background:
feedback: {}
goal: {}
goal_default:
int_time: null
laser_power: null
handles: {}
placeholder_keys: {}
result: {}
schema:
description: 执行无背景扣除的拉曼光谱测量函数。用于直接采集样品的拉曼光谱信号,不进行背景校正处理。该函数配置积分时间和激光功率参数,获取原始光谱数据用于后续的数据处理分析。适用于对光谱数据质量要求较高或需要自定义背景处理流程的测量场景。
properties:
feedback: {}
goal:
properties:
int_time:
type: string
laser_power:
type: string
required:
- int_time
- laser_power
type: object
result: {}
required:
- goal
title: raman_without_background参数
type: object
type: UniLabJsonCommand
auto-raman_without_background_average:
feedback: {}
goal: {}
goal_default:
average: null
int_time: null
laser_power: null
sample_name: null
handles: {}
placeholder_keys: {}
result: {}
schema:
description: 执行多次平均的无背景拉曼光谱测量函数。通过多次测量取平均值来提高光谱数据的信噪比和测量精度,减少随机噪声影响。该函数支持自定义平均次数、积分时间、激光功率等参数,并可为样品指定名称便于数据管理。适用于对测量精度要求较高的定量分析和研究应用。
properties:
feedback: {}
goal:
properties:
average:
type: string
int_time:
type: string
laser_power:
type: string
sample_name:
type: string
required:
- sample_name
- int_time
- laser_power
- average
type: object
result: {}
required:
- goal
title: raman_without_background_average参数
type: object
type: UniLabJsonCommand
raman_cmd:
feedback: {}
goal:
command: command
goal_default:
command: ''
handles: {}
result:
success: success
schema:
description: ''
properties:
feedback:
properties:
status:
type: string
required:
- status
title: SendCmd_Feedback
type: object
goal:
properties:
command:
type: string
required:
- command
title: SendCmd_Goal
type: object
result:
properties:
return_info:
type: string
success:
type: boolean
required:
- return_info
- success
title: SendCmd_Result
type: object
required:
- goal
title: SendCmd
type: object
type: SendCmd
module: unilabos.devices.raman_uv.home_made_raman:RamanObj
status_types: {}
type: python
config_info: []
description: 拉曼光谱分析设备用于物质的分子结构和化学成分表征。该设备集成激光器和CCD检测器通过串口通信控制激光功率和光谱采集。具备背景扣除、多次平均、自动数据处理等功能支持高精度的拉曼光谱测量。适用于材料表征、化学分析、质量控制、研究开发等需要分子指纹识别和结构分析的实验应用。
handles: []
icon: ''
init_param_schema:
config:
properties:
baudrate_ccd:
default: 921600
type: string
baudrate_laser:
default: 9600
type: string
port_ccd:
type: string
port_laser:
type: string
required:
- port_laser
- port_ccd
type: object
data:
properties: {}
required: []
type: object
version: 1.0.0
{}

View File

@@ -0,0 +1,584 @@
coincellassemblyworkstation_device:
category:
- coin_cell_workstation
class:
action_value_mappings:
auto-change_hole_sheet_to_2:
feedback: {}
goal: {}
goal_default:
hole: null
handles: {}
placeholder_keys: {}
result: {}
schema:
description: ''
properties:
feedback: {}
goal:
properties:
hole:
type: object
required:
- hole
type: object
result: {}
required:
- goal
title: change_hole_sheet_to_2参数
type: object
type: UniLabJsonCommandAsync
auto-fill_plate:
feedback: {}
goal: {}
goal_default: {}
handles: {}
placeholder_keys: {}
result: {}
schema:
description: ''
properties:
feedback: {}
goal:
properties: {}
required: []
type: object
result: {}
required:
- goal
title: fill_plate参数
type: object
type: UniLabJsonCommandAsync
auto-fun_wuliao_test:
feedback: {}
goal: {}
goal_default: {}
handles: {}
placeholder_keys: {}
result: {}
schema:
description: ''
properties:
feedback: {}
goal:
properties: {}
required: []
type: object
result: {}
required:
- goal
title: fun_wuliao_test参数
type: object
type: UniLabJsonCommand
auto-func_allpack_cmd:
feedback: {}
goal: {}
goal_default:
assembly_pressure: 4200
assembly_type: 7
elec_num: null
elec_use_num: null
elec_vol: 50
file_path: D:\coin_cell_data
handles: {}
placeholder_keys: {}
result: {}
schema:
description: ''
properties:
feedback: {}
goal:
properties:
assembly_pressure:
default: 4200
type: integer
assembly_type:
default: 7
type: integer
elec_num:
type: string
elec_use_num:
type: string
elec_vol:
default: 50
type: integer
file_path:
default: D:\coin_cell_data
type: string
required:
- elec_num
- elec_use_num
type: object
result: {}
required:
- goal
title: func_allpack_cmd参数
type: object
type: UniLabJsonCommand
auto-func_get_csv_export_status:
feedback: {}
goal: {}
goal_default: {}
handles: {}
placeholder_keys: {}
result: {}
schema:
description: ''
properties:
feedback: {}
goal:
properties: {}
required: []
type: object
result: {}
required:
- goal
title: func_get_csv_export_status参数
type: object
type: UniLabJsonCommand
auto-func_pack_device_auto:
feedback: {}
goal: {}
goal_default: {}
handles: {}
placeholder_keys: {}
result: {}
schema:
description: ''
properties:
feedback: {}
goal:
properties: {}
required: []
type: object
result: {}
required:
- goal
title: func_pack_device_auto参数
type: object
type: UniLabJsonCommand
auto-func_pack_device_init:
feedback: {}
goal: {}
goal_default: {}
handles: {}
placeholder_keys: {}
result: {}
schema:
description: ''
properties:
feedback: {}
goal:
properties: {}
required: []
type: object
result: {}
required:
- goal
title: func_pack_device_init参数
type: object
type: UniLabJsonCommand
auto-func_pack_device_start:
feedback: {}
goal: {}
goal_default: {}
handles: {}
placeholder_keys: {}
result: {}
schema:
description: ''
properties:
feedback: {}
goal:
properties: {}
required: []
type: object
result: {}
required:
- goal
title: func_pack_device_start参数
type: object
type: UniLabJsonCommand
auto-func_pack_device_stop:
feedback: {}
goal: {}
goal_default: {}
handles: {}
placeholder_keys: {}
result: {}
schema:
description: ''
properties:
feedback: {}
goal:
properties: {}
required: []
type: object
result: {}
required:
- goal
title: func_pack_device_stop参数
type: object
type: UniLabJsonCommand
auto-func_pack_get_msg_cmd:
feedback: {}
goal: {}
goal_default:
file_path: D:\coin_cell_data
handles: {}
placeholder_keys: {}
result: {}
schema:
description: ''
properties:
feedback: {}
goal:
properties:
file_path:
default: D:\coin_cell_data
type: string
required: []
type: object
result: {}
required:
- goal
title: func_pack_get_msg_cmd参数
type: object
type: UniLabJsonCommand
auto-func_pack_send_bottle_num:
feedback: {}
goal: {}
goal_default:
bottle_num: null
handles: {}
placeholder_keys: {}
result: {}
schema:
description: ''
properties:
feedback: {}
goal:
properties:
bottle_num:
type: string
required:
- bottle_num
type: object
result: {}
required:
- goal
title: func_pack_send_bottle_num参数
type: object
type: UniLabJsonCommand
auto-func_pack_send_finished_cmd:
feedback: {}
goal: {}
goal_default: {}
handles: {}
placeholder_keys: {}
result: {}
schema:
description: ''
properties:
feedback: {}
goal:
properties: {}
required: []
type: object
result: {}
required:
- goal
title: func_pack_send_finished_cmd参数
type: object
type: UniLabJsonCommand
auto-func_pack_send_msg_cmd:
feedback: {}
goal: {}
goal_default:
assembly_pressure: null
assembly_type: null
elec_use_num: null
elec_vol: null
handles: {}
placeholder_keys: {}
result: {}
schema:
description: ''
properties:
feedback: {}
goal:
properties:
assembly_pressure:
type: string
assembly_type:
type: string
elec_use_num:
type: string
elec_vol:
type: string
required:
- elec_use_num
- elec_vol
- assembly_type
- assembly_pressure
type: object
result: {}
required:
- goal
title: func_pack_send_msg_cmd参数
type: object
type: UniLabJsonCommand
auto-func_read_data_and_output:
feedback: {}
goal: {}
goal_default:
file_path: D:\coin_cell_data
handles: {}
placeholder_keys: {}
result: {}
schema:
description: ''
properties:
feedback: {}
goal:
properties:
file_path:
default: D:\coin_cell_data
type: string
required: []
type: object
result: {}
required:
- goal
title: func_read_data_and_output参数
type: object
type: UniLabJsonCommand
auto-func_stop_read_data:
feedback: {}
goal: {}
goal_default: {}
handles: {}
placeholder_keys: {}
result: {}
schema:
description: ''
properties:
feedback: {}
goal:
properties: {}
required: []
type: object
result: {}
required:
- goal
title: func_stop_read_data参数
type: object
type: UniLabJsonCommand
auto-modify_deck_name:
feedback: {}
goal: {}
goal_default:
resource_name: null
handles: {}
placeholder_keys: {}
result: {}
schema:
description: ''
properties:
feedback: {}
goal:
properties:
resource_name:
type: string
required:
- resource_name
type: object
result: {}
required:
- goal
title: modify_deck_name参数
type: object
type: UniLabJsonCommand
auto-post_init:
feedback: {}
goal: {}
goal_default:
ros_node: null
handles: {}
placeholder_keys: {}
result: {}
schema:
description: ''
properties:
feedback: {}
goal:
properties:
ros_node:
type: object
required:
- ros_node
type: object
result: {}
required:
- goal
title: post_init参数
type: object
type: UniLabJsonCommand
auto-qiming_coin_cell_code:
feedback: {}
goal: {}
goal_default:
battery_clean_ignore: false
battery_pressure: 4000
battery_pressure_mode: true
fujipian_juzhendianwei: 0
fujipian_panshu: null
gemo_juzhendianwei: 0
gemopanshu: 0
lvbodian: true
handles: {}
placeholder_keys: {}
result: {}
schema:
description: ''
properties:
feedback: {}
goal:
properties:
battery_clean_ignore:
default: false
type: boolean
battery_pressure:
default: 4000
type: integer
battery_pressure_mode:
default: true
type: boolean
fujipian_juzhendianwei:
default: 0
type: integer
fujipian_panshu:
type: integer
gemo_juzhendianwei:
default: 0
type: integer
gemopanshu:
default: 0
type: integer
lvbodian:
default: true
type: boolean
required:
- fujipian_panshu
type: object
result: {}
required:
- goal
title: qiming_coin_cell_code参数
type: object
type: UniLabJsonCommand
module: unilabos.devices.workstation.coin_cell_assembly.coin_cell_assembly:CoinCellAssemblyWorkstation
status_types:
data_assembly_coin_cell_num: int
data_assembly_pressure: int
data_assembly_time: float
data_axis_x_pos: float
data_axis_y_pos: float
data_axis_z_pos: float
data_coin_cell_code: str
data_coin_num: int
data_electrolyte_code: str
data_electrolyte_volume: int
data_glove_box_o2_content: float
data_glove_box_pressure: float
data_glove_box_water_content: float
data_open_circuit_voltage: float
data_pole_weight: float
request_rec_msg_status: bool
request_send_msg_status: bool
sys_mode: str
sys_status: str
type: python
config_info: []
description: ''
handles: []
icon: ''
init_param_schema:
config:
properties:
address:
default: 172.21.32.111
type: string
debug_mode:
default: false
type: boolean
deck:
type: object
port:
default: '502'
type: string
required: []
type: object
data:
properties:
data_assembly_coin_cell_num:
type: integer
data_assembly_pressure:
type: integer
data_assembly_time:
type: number
data_axis_x_pos:
type: number
data_axis_y_pos:
type: number
data_axis_z_pos:
type: number
data_coin_cell_code:
type: string
data_coin_num:
type: integer
data_electrolyte_code:
type: string
data_electrolyte_volume:
type: integer
data_glove_box_o2_content:
type: number
data_glove_box_pressure:
type: number
data_glove_box_water_content:
type: number
data_open_circuit_voltage:
type: number
data_pole_weight:
type: number
request_rec_msg_status:
type: boolean
request_send_msg_status:
type: boolean
sys_mode:
type: string
sys_status:
type: string
required:
- sys_status
- sys_mode
- request_rec_msg_status
- request_send_msg_status
- data_assembly_coin_cell_num
- data_assembly_time
- data_open_circuit_voltage
- data_axis_x_pos
- data_axis_y_pos
- data_axis_z_pos
- data_pole_weight
- data_assembly_pressure
- data_electrolyte_volume
- data_coin_num
- data_coin_cell_code
- data_electrolyte_code
- data_glove_box_pressure
- data_glove_box_o2_content
- data_glove_box_water_content
type: object
registry_type: device
version: 1.0.0

File diff suppressed because it is too large Load Diff

View File

@@ -1361,8 +1361,7 @@ laiyu_liquid:
mix_liquid_height: 0.0
mix_rate: 0
mix_stage: ''
mix_times:
- 0
mix_times: 0
mix_vol: 0
none_keys:
- ''
@@ -1492,11 +1491,9 @@ laiyu_liquid:
mix_stage:
type: string
mix_times:
items:
maximum: 2147483647
minimum: -2147483648
type: integer
type: array
maximum: 2147483647
minimum: -2147483648
type: integer
mix_vol:
maximum: 2147483647
minimum: -2147483648

View File

@@ -3994,8 +3994,7 @@ liquid_handler:
mix_liquid_height: 0.0
mix_rate: 0
mix_stage: ''
mix_times:
- 0
mix_times: 0
mix_vol: 0
none_keys:
- ''
@@ -4151,11 +4150,9 @@ liquid_handler:
mix_stage:
type: string
mix_times:
items:
maximum: 2147483647
minimum: -2147483648
type: integer
type: array
maximum: 2147483647
minimum: -2147483648
type: integer
mix_vol:
maximum: 2147483647
minimum: -2147483648
@@ -5015,8 +5012,7 @@ liquid_handler.biomek:
mix_liquid_height: 0.0
mix_rate: 0
mix_stage: ''
mix_times:
- 0
mix_times: 0
mix_vol: 0
none_keys:
- ''
@@ -5159,11 +5155,9 @@ liquid_handler.biomek:
mix_stage:
type: string
mix_times:
items:
maximum: 2147483647
minimum: -2147483648
type: integer
type: array
maximum: 2147483647
minimum: -2147483648
type: integer
mix_vol:
maximum: 2147483647
minimum: -2147483648
@@ -7807,8 +7801,7 @@ liquid_handler.prcxi:
mix_liquid_height: 0.0
mix_rate: 0
mix_stage: ''
mix_times:
- 0
mix_times: 0
mix_vol: 0
none_keys:
- ''
@@ -7937,11 +7930,9 @@ liquid_handler.prcxi:
mix_stage:
type: string
mix_times:
items:
maximum: 2147483647
minimum: -2147483648
type: integer
type: array
maximum: 2147483647
minimum: -2147483648
type: integer
mix_vol:
maximum: 2147483647
minimum: -2147483648

File diff suppressed because it is too large Load Diff

View File

@@ -834,174 +834,3 @@ linear_motion.toyo_xyz.sim:
mesh: toyo_xyz
type: device
version: 1.0.0
motor.iCL42:
category:
- robot_linear_motion
class:
action_value_mappings:
auto-execute_run_motor:
feedback: {}
goal: {}
goal_default:
mode: null
position: null
velocity: null
handles: {}
placeholder_keys: {}
result: {}
schema:
description: 步进电机执行运动函数。直接执行电机运动命令,包括位置设定、速度控制和路径规划。该函数处理底层的电机控制协议,消除警告信息,设置运动参数并启动电机运行。适用于需要直接控制电机运动的应用场景。
properties:
feedback: {}
goal:
properties:
mode:
type: string
position:
type: number
velocity:
type: integer
required:
- mode
- position
- velocity
type: object
result: {}
required:
- goal
title: execute_run_motor参数
type: object
type: UniLabJsonCommand
auto-init_device:
feedback: {}
goal: {}
goal_default: {}
handles: {}
placeholder_keys: {}
result: {}
schema:
description: iCL42电机设备初始化函数。建立与iCL42步进电机驱动器的串口通信连接配置通信参数包括波特率、数据位、校验位等。该函数是电机使用前的必要步骤确保驱动器处于可控状态并准备接收运动指令。
properties:
feedback: {}
goal:
properties: {}
required: []
type: object
result: {}
required:
- goal
title: init_device参数
type: object
type: UniLabJsonCommand
auto-run_motor:
feedback: {}
goal: {}
goal_default:
mode: null
position: null
velocity: null
handles: {}
placeholder_keys: {}
result: {}
schema:
description: 步进电机运动控制函数。根据指定的运动模式、目标位置和速度参数控制电机运动。支持多种运动模式和精确的位置控制,自动处理运动轨迹规划和执行。该函数提供异步执行和状态反馈,确保运动的准确性和可靠性。
properties:
feedback: {}
goal:
properties:
mode:
type: string
position:
type: number
velocity:
type: integer
required:
- mode
- position
- velocity
type: object
result: {}
required:
- goal
title: run_motor参数
type: object
type: UniLabJsonCommand
execute_command_from_outer:
feedback: {}
goal:
command: command
goal_default:
command: ''
handles: {}
result:
success: success
schema:
description: ''
properties:
feedback:
properties:
status:
type: string
required:
- status
title: SendCmd_Feedback
type: object
goal:
properties:
command:
type: string
required:
- command
title: SendCmd_Goal
type: object
result:
properties:
return_info:
type: string
success:
type: boolean
required:
- return_info
- success
title: SendCmd_Result
type: object
required:
- goal
title: SendCmd
type: object
type: SendCmd
module: unilabos.devices.motor.iCL42:iCL42Driver
status_types:
is_executing_run: bool
motor_position: int
success: bool
type: python
config_info: []
description: iCL42步进电机驱动器用于实验室设备的精密线性运动控制。该设备通过串口通信控制iCL42型步进电机驱动器支持多种运动模式和精确的位置、速度控制。具备位置反馈、运行状态监控和故障检测功能。适用于自动进样器、样品传送、精密定位平台等需要准确线性运动控制的实验室自动化设备。
handles: []
icon: ''
init_param_schema:
config:
properties:
device_address:
default: 1
type: integer
device_com:
default: COM9
type: string
required: []
type: object
data:
properties:
is_executing_run:
type: boolean
motor_position:
type: integer
success:
type: boolean
required:
- motor_position
- is_executing_run
- success
type: object
version: 1.0.0

File diff suppressed because it is too large Load Diff

View File

@@ -708,6 +708,8 @@ class Registry:
for status_name, status_type in device_config["class"]["status_types"].items():
device_config["class"]["status_types"][status_name] = status_str_type_mapping[status_type]
for action_name, action_config in device_config["class"]["action_value_mappings"].items():
if action_config["type"] not in action_str_type_mapping:
continue
action_config["type"] = action_str_type_mapping[action_config["type"]]
# 添加内置的驱动命令动作
self._add_builtin_actions(device_config, device_id)

View File

@@ -0,0 +1,65 @@
YB_Pipette_Tip:
category:
- yb3
- YB_bottle
class:
module: unilabos.resources.bioyond.YB_bottles:YB_Pipette_Tip
type: pylabrobot
description: YB_Pipette_Tip
handles: []
icon: ''
init_param_schema: {}
registry_type: resource
version: 1.0.0
YB_fen_ye_20ml_Bottle:
category:
- yb3
- YB_bottle
class:
module: unilabos.resources.bioyond.YB_bottles:YB_fen_ye_20ml_Bottle
type: pylabrobot
description: YB_fen_ye_20ml_Bottle
handles: []
icon: ''
init_param_schema: {}
registry_type: resource
version: 1.0.0
YB_fen_ye_5ml_Bottle:
category:
- yb3
- YB_bottle
class:
module: unilabos.resources.bioyond.YB_bottles:YB_fen_ye_5ml_Bottle
type: pylabrobot
description: YB_fen_ye_5ml_Bottle
handles: []
icon: ''
init_param_schema: {}
registry_type: resource
version: 1.0.0
YB_pei_ye_da_Bottle:
category:
- yb3
- YB_bottle
class:
module: unilabos.resources.bioyond.YB_bottles:YB_pei_ye_da_Bottle
type: pylabrobot
description: YB_pei_ye_da_Bottle
handles: []
icon: ''
init_param_schema: {}
registry_type: resource
version: 1.0.0
YB_pei_ye_xiao_Bottle:
category:
- yb3
- YB_bottle
class:
module: unilabos.resources.bioyond.YB_bottles:YB_pei_ye_xiao_Bottle
type: pylabrobot
description: YB_pei_ye_xiao_Bottle
handles: []
icon: ''
init_param_schema: {}
registry_type: resource
version: 1.0.0

View File

@@ -0,0 +1,208 @@
YB_1Bottle100mlCarrier:
category:
- yb3
- YB_bottle_carriers
class:
module: unilabos.resources.bioyond.YB_bottle_carriers:YB_1Bottle100mlCarrier
type: pylabrobot
description: YB_1Bottle100mlCarrier
handles: []
icon: ''
init_param_schema: {}
registry_type: resource
version: 1.0.0
YB_1BottleCarrier:
category:
- yb3
- YB_bottle_carriers
class:
module: unilabos.resources.bioyond.YB_bottle_carriers:YB_1BottleCarrier
type: pylabrobot
description: YB_1BottleCarrier
handles: []
icon: ''
init_param_schema: {}
registry_type: resource
version: 1.0.0
YB_1GaoNianYeBottleCarrier:
category:
- yb3
- YB_bottle_carriers
class:
module: unilabos.resources.bioyond.YB_bottle_carriers:YB_1GaoNianYeBottleCarrier
type: pylabrobot
description: YB_1GaoNianYeBottleCarrier
handles: []
icon: ''
init_param_schema: {}
registry_type: resource
version: 1.0.0
YB_4x_LargeSolutionBottleCarrier:
category:
- yb3
- YB_bottle_carriers
class:
module: unilabos.resources.bioyond.YB_bottle_carriers:YB_4x_LargeSolutionBottleCarrier
type: pylabrobot
description: YB_4x_LargeSolutionBottleCarrier
handles: []
icon: ''
init_param_schema: {}
registry_type: resource
version: 1.0.0
YB_6StockCarrier:
category:
- yb3
- YB_bottle_carriers
class:
module: unilabos.resources.bioyond.YB_bottle_carriers:YB_6StockCarrier
type: pylabrobot
description: YB_6StockCarrier
handles: []
icon: ''
init_param_schema: {}
registry_type: resource
version: 1.0.0
YB_6VialCarrier:
category:
- yb3
- YB_bottle_carriers
class:
module: unilabos.resources.bioyond.YB_bottle_carriers:YB_6VialCarrier
type: pylabrobot
description: YB_6VialCarrier
handles: []
icon: ''
init_param_schema: {}
registry_type: resource
version: 1.0.0
YB_6x20ml_DispensingVialCarrier:
category:
- yb3
- YB_bottle_carriers
class:
module: unilabos.resources.bioyond.YB_bottle_carriers:YB_6x20ml_DispensingVialCarrier
type: pylabrobot
description: YB_6x20ml_DispensingVialCarrier
handles: []
icon: ''
init_param_schema: {}
registry_type: resource
version: 1.0.0
YB_6x5ml_DispensingVialCarrier:
category:
- yb3
- YB_bottle_carriers
class:
module: unilabos.resources.bioyond.YB_bottle_carriers:YB_6x5ml_DispensingVialCarrier
type: pylabrobot
description: YB_6x5ml_DispensingVialCarrier
handles: []
icon: ''
init_param_schema: {}
registry_type: resource
version: 1.0.0
YB_6x_SmallSolutionBottleCarrier:
category:
- yb3
- YB_bottle_carriers
class:
module: unilabos.resources.bioyond.YB_bottle_carriers:YB_6x_SmallSolutionBottleCarrier
type: pylabrobot
description: YB_6x_SmallSolutionBottleCarrier
handles: []
icon: ''
init_param_schema: {}
registry_type: resource
version: 1.0.0
YB_AdapterBlock:
category:
- yb3
- YB_bottle_carriers
class:
module: unilabos.resources.bioyond.YB_bottle_carriers:YB_AdapterBlock
type: pylabrobot
description: YB_AdapterBlock
handles: []
icon: ''
init_param_schema: {}
registry_type: resource
version: 1.0.0
YB_TipBox:
category:
- yb3
- YB_bottle_carriers
class:
module: unilabos.resources.bioyond.YB_bottle_carriers:YB_TipBox
type: pylabrobot
description: YB_TipBox
handles: []
icon: ''
init_param_schema: {}
registry_type: resource
version: 1.0.0
YB_gao_nian_ye_Bottle:
category:
- yb3
- YB_bottle_carriers
class:
module: unilabos.resources.bioyond.YB_bottles:YB_gao_nian_ye_Bottle
type: pylabrobot
description: YB_gao_nian_ye_Bottle
handles: []
icon: ''
init_param_schema: {}
registry_type: resource
version: 1.0.0
YB_jia_yang_tou_da:
category:
- yb3
- YB_bottle_carriers
class:
module: unilabos.resources.bioyond.YB_bottles:YB_jia_yang_tou_da
type: pylabrobot
description: YB_jia_yang_tou_da
handles: []
icon: ''
init_param_schema: {}
registry_type: resource
version: 1.0.0
YB_jia_yang_tou_da_1X1_carrier:
category:
- yb3
- YB_bottle_carriers
class:
module: unilabos.resources.bioyond.YB_bottle_carriers:YB_jia_yang_tou_da_1X1_carrier
type: pylabrobot
description: YB_jia_yang_tou_da_1X1_carrier
handles: []
icon: ''
init_param_schema: {}
registry_type: resource
version: 1.0.0
YB_ye_100ml_Bottle:
category:
- yb3
- YB_bottle_carriers
class:
module: unilabos.resources.bioyond.YB_bottles:YB_ye_100ml_Bottle
type: pylabrobot
description: YB_ye_100ml_Bottle
handles: []
icon: ''
init_param_schema: {}
registry_type: resource
version: 1.0.0
YB_ye_Bottle:
category:
- yb3
- YB_bottle_carriers
class:
module: unilabos.resources.bioyond.YB_bottles:YB_ye_Bottle
type: pylabrobot
description: YB_ye_Bottle
handles: []
icon: ''
init_param_schema: {}
registry_type: resource
version: 1.0.0

View File

@@ -1,48 +0,0 @@
BIOYOND_PolymerStation_1BottleCarrier:
category:
- bottle_carriers
class:
module: unilabos.resources.bioyond.bottle_carriers:BIOYOND_PolymerStation_1BottleCarrier
type: pylabrobot
description: BIOYOND_PolymerStation_1BottleCarrier
handles: []
icon: ''
init_param_schema: {}
registry_type: resource
version: 1.0.0
BIOYOND_PolymerStation_1FlaskCarrier:
category:
- bottle_carriers
class:
module: unilabos.resources.bioyond.bottle_carriers:BIOYOND_PolymerStation_1FlaskCarrier
type: pylabrobot
description: BIOYOND_PolymerStation_1FlaskCarrier
handles: []
icon: ''
init_param_schema: {}
registry_type: resource
version: 1.0.0
BIOYOND_PolymerStation_6StockCarrier:
category:
- bottle_carriers
class:
module: unilabos.resources.bioyond.bottle_carriers:BIOYOND_PolymerStation_6StockCarrier
type: pylabrobot
description: BIOYOND_PolymerStation_6StockCarrier
handles: []
icon: ''
init_param_schema: {}
registry_type: resource
version: 1.0.0
BIOYOND_PolymerStation_6VialCarrier:
category:
- bottle_carriers
class:
module: unilabos.resources.bioyond.bottle_carriers:BIOYOND_PolymerStation_6VialCarrier
type: pylabrobot
description: BIOYOND_PolymerStation_6VialCarrier
handles: []
icon: ''
init_param_schema: {}
registry_type: resource
version: 1.0.0

View File

@@ -1,50 +0,0 @@
BIOYOND_PolymerStation_Liquid_Vial:
category:
- bottles
class:
module: unilabos.resources.bioyond.bottles:BIOYOND_PolymerStation_Liquid_Vial
type: pylabrobot
handles: []
icon: ''
init_param_schema: {}
version: 1.0.0
BIOYOND_PolymerStation_Reagent_Bottle:
category:
- bottles
class:
module: unilabos.resources.bioyond.bottles:BIOYOND_PolymerStation_Reagent_Bottle
type: pylabrobot
handles: []
icon: ''
init_param_schema: {}
version: 1.0.0
BIOYOND_PolymerStation_Solid_Stock:
category:
- bottles
class:
module: unilabos.resources.bioyond.bottles:BIOYOND_PolymerStation_Solid_Stock
type: pylabrobot
handles: []
icon: ''
init_param_schema: {}
version: 1.0.0
BIOYOND_PolymerStation_Solid_Vial:
category:
- bottles
class:
module: unilabos.resources.bioyond.bottles:BIOYOND_PolymerStation_Solid_Vial
type: pylabrobot
handles: []
icon: ''
init_param_schema: {}
version: 1.0.0
BIOYOND_PolymerStation_Solution_Beaker:
category:
- bottles
class:
module: unilabos.resources.bioyond.bottles:BIOYOND_PolymerStation_Solution_Beaker
type: pylabrobot
handles: []
icon: ''
init_param_schema: {}
version: 1.0.0

View File

@@ -22,3 +22,15 @@ BIOYOND_PolymerReactionStation_Deck:
init_param_schema: {}
registry_type: resource
version: 1.0.0
YB_Deck16:
category:
- deck
class:
module: unilabos.resources.bioyond.decks:YB_Deck
type: pylabrobot
description: BIOYOND PolymerReactionStation Deck
handles: []
icon: 配液站.webp
init_param_schema: {}
registry_type: resource
version: 1.0.0

View File

@@ -3,7 +3,7 @@ container:
- container
class:
module: unilabos.resources.container:RegularContainer
type: unilabos
type: pylabrobot
description: regular organic container
handles:
- data_key: fluid_in

View File

@@ -0,0 +1,653 @@
from pylabrobot.resources import create_homogeneous_resources, Coordinate, ResourceHolder, create_ordered_items_2d
from unilabos.resources.itemized_carrier import Bottle, BottleCarrier
from unilabos.resources.bioyond.YB_bottles import (
YB_jia_yang_tou_da,
YB_ye_Bottle,
YB_ye_100ml_Bottle,
YB_gao_nian_ye_Bottle,
YB_fen_ye_5ml_Bottle,
YB_fen_ye_20ml_Bottle,
YB_pei_ye_xiao_Bottle,
YB_pei_ye_da_Bottle,
YB_Pipette_Tip,
)
# 命名约定:试剂瓶-Bottle烧杯-Beaker烧瓶-Flask小瓶-Vial
def BIOYOND_Electrolyte_6VialCarrier(name: str) -> BottleCarrier:
"""6瓶载架 - 2x3布局"""
# 载架尺寸 (mm)
carrier_size_x = 127.8
carrier_size_y = 85.5
carrier_size_z = 50.0
# 瓶位尺寸
bottle_diameter = 30.0
bottle_spacing_x = 42.0 # X方向间距
bottle_spacing_y = 35.0 # Y方向间距
# 计算起始位置 (居中排列)
start_x = (carrier_size_x - (3 - 1) * bottle_spacing_x - bottle_diameter) / 2
start_y = (carrier_size_y - (2 - 1) * bottle_spacing_y - bottle_diameter) / 2
sites = create_ordered_items_2d(
klass=ResourceHolder,
num_items_x=3,
num_items_y=2,
dx=start_x,
dy=start_y,
dz=5.0,
item_dx=bottle_spacing_x,
item_dy=bottle_spacing_y,
size_x=bottle_diameter,
size_y=bottle_diameter,
size_z=carrier_size_z,
)
for k, v in sites.items():
v.name = f"{name}_{v.name}"
carrier = BottleCarrier(
name=name,
size_x=carrier_size_x,
size_y=carrier_size_y,
size_z=carrier_size_z,
sites=sites,
model="Electrolyte_6VialCarrier",
)
carrier.num_items_x = 3
carrier.num_items_y = 2
carrier.num_items_z = 1
# for i in range(6):
# carrier[i] = YB_Solid_Vial(f"{name}_vial_{i+1}")
return carrier
def BIOYOND_Electrolyte_1BottleCarrier(name: str) -> BottleCarrier:
"""1瓶载架 - 单个中央位置"""
# 载架尺寸 (mm)
carrier_size_x = 127.8
carrier_size_y = 85.5
carrier_size_z = 100.0
# 烧杯尺寸
beaker_diameter = 80.0
# 计算中央位置
center_x = (carrier_size_x - beaker_diameter) / 2
center_y = (carrier_size_y - beaker_diameter) / 2
center_z = 5.0
carrier = BottleCarrier(
name=name,
size_x=carrier_size_x,
size_y=carrier_size_y,
size_z=carrier_size_z,
sites=create_homogeneous_resources(
klass=ResourceHolder,
locations=[Coordinate(center_x, center_y, center_z)],
resource_size_x=beaker_diameter,
resource_size_y=beaker_diameter,
name_prefix=name,
),
model="Electrolyte_1BottleCarrier",
)
carrier.num_items_x = 1
carrier.num_items_y = 1
carrier.num_items_z = 1
# carrier[0] = YB_Solution_Beaker(f"{name}_beaker_1")
return carrier
def YB_6StockCarrier(name: str) -> BottleCarrier:
"""6瓶载架 - 2x3布局"""
# 载架尺寸 (mm)
carrier_size_x = 127.8
carrier_size_y = 85.5
carrier_size_z = 50.0
# 瓶位尺寸
bottle_diameter = 20.0
bottle_spacing_x = 42.0 # X方向间距
bottle_spacing_y = 35.0 # Y方向间距
# 计算起始位置 (居中排列)
start_x = (carrier_size_x - (3 - 1) * bottle_spacing_x - bottle_diameter) / 2
start_y = (carrier_size_y - (2 - 1) * bottle_spacing_y - bottle_diameter) / 2
sites = create_ordered_items_2d(
klass=ResourceHolder,
num_items_x=3,
num_items_y=2,
dx=start_x,
dy=start_y,
dz=5.0,
item_dx=bottle_spacing_x,
item_dy=bottle_spacing_y,
size_x=bottle_diameter,
size_y=bottle_diameter,
size_z=carrier_size_z,
)
for k, v in sites.items():
v.name = f"{name}_{v.name}"
carrier = BottleCarrier(
name=name,
size_x=carrier_size_x,
size_y=carrier_size_y,
size_z=carrier_size_z,
sites=sites,
model="6StockCarrier",
)
carrier.num_items_x = 3
carrier.num_items_y = 2
carrier.num_items_z = 1
ordering = ["A1", "A2", "A3", "B1", "B2", "B3"] # 自定义顺序
# for i in range(6):
# carrier[i] = YB_Solid_Stock(f"{name}_vial_{ordering[i]}")
return carrier
def YB_6VialCarrier(name: str) -> BottleCarrier:
"""6瓶载架 - 2x3布局"""
# 载架尺寸 (mm)
carrier_size_x = 127.8
carrier_size_y = 85.5
carrier_size_z = 50.0
# 瓶位尺寸
bottle_diameter = 30.0
bottle_spacing_x = 42.0 # X方向间距
bottle_spacing_y = 35.0 # Y方向间距
# 计算起始位置 (居中排列)
start_x = (carrier_size_x - (3 - 1) * bottle_spacing_x - bottle_diameter) / 2
start_y = (carrier_size_y - (2 - 1) * bottle_spacing_y - bottle_diameter) / 2
sites = create_ordered_items_2d(
klass=ResourceHolder,
num_items_x=3,
num_items_y=2,
dx=start_x,
dy=start_y,
dz=5.0,
item_dx=bottle_spacing_x,
item_dy=bottle_spacing_y,
size_x=bottle_diameter,
size_y=bottle_diameter,
size_z=carrier_size_z,
)
for k, v in sites.items():
v.name = f"{name}_{v.name}"
carrier = BottleCarrier(
name=name,
size_x=carrier_size_x,
size_y=carrier_size_y,
size_z=carrier_size_z,
sites=sites,
model="6VialCarrier",
)
carrier.num_items_x = 3
carrier.num_items_y = 2
carrier.num_items_z = 1
ordering = ["A1", "A2", "A3", "B1", "B2", "B3"] # 自定义顺序
# for i in range(3):
# carrier[i] = YB_Solid_Vial(f"{name}_solidvial_{ordering[i]}")
# for i in range(3, 6):
# carrier[i] = YB_Liquid_Vial(f"{name}_liquidvial_{ordering[i]}")
return carrier
# 1瓶载架 - 单个中央位置
def YB_1BottleCarrier(name: str) -> BottleCarrier:
# 载架尺寸 (mm)
carrier_size_x = 127.8
carrier_size_y = 85.5
carrier_size_z = 20.0
# 烧杯尺寸
beaker_diameter = 60.0
# 计算中央位置
center_x = (carrier_size_x - beaker_diameter) / 2
center_y = (carrier_size_y - beaker_diameter) / 2
center_z = 5.0
carrier = BottleCarrier(
name=name,
size_x=carrier_size_x,
size_y=carrier_size_y,
size_z=carrier_size_z,
sites=create_homogeneous_resources(
klass=ResourceHolder,
locations=[Coordinate(center_x, center_y, center_z)],
resource_size_x=beaker_diameter,
resource_size_y=beaker_diameter,
name_prefix=name,
),
model="1BottleCarrier",
)
carrier.num_items_x = 1
carrier.num_items_y = 1
carrier.num_items_z = 1
carrier[0] = YB_ye_Bottle(f"{name}_flask_1")
return carrier
# 高粘液瓶载架 - 单个中央位置
def YB_1GaoNianYeBottleCarrier(name: str) -> BottleCarrier:
# 载架尺寸 (mm)
carrier_size_x = 127.8
carrier_size_y = 85.5
carrier_size_z = 20.0
# 烧杯尺寸
beaker_diameter = 60.0
# 计算中央位置
center_x = (carrier_size_x - beaker_diameter) / 2
center_y = (carrier_size_y - beaker_diameter) / 2
center_z = 5.0
carrier = BottleCarrier(
name=name,
size_x=carrier_size_x,
size_y=carrier_size_y,
size_z=carrier_size_z,
sites=create_homogeneous_resources(
klass=ResourceHolder,
locations=[Coordinate(center_x, center_y, center_z)],
resource_size_x=beaker_diameter,
resource_size_y=beaker_diameter,
name_prefix=name,
),
model="1GaoNianYeBottleCarrier",
)
carrier.num_items_x = 1
carrier.num_items_y = 1
carrier.num_items_z = 1
carrier[0] = YB_gao_nian_ye_Bottle(f"{name}_flask_1")
return carrier
# 100ml液体瓶载架 - 单个中央位置
def YB_1Bottle100mlCarrier(name: str) -> BottleCarrier:
# 载架尺寸 (mm)
carrier_size_x = 127.8
carrier_size_y = 85.5
carrier_size_z = 20.0
# 烧杯尺寸
beaker_diameter = 60.0
# 计算中央位置
center_x = (carrier_size_x - beaker_diameter) / 2
center_y = (carrier_size_y - beaker_diameter) / 2
center_z = 5.0
carrier = BottleCarrier(
name=name,
size_x=carrier_size_x,
size_y=carrier_size_y,
size_z=carrier_size_z,
sites=create_homogeneous_resources(
klass=ResourceHolder,
locations=[Coordinate(center_x, center_y, center_z)],
resource_size_x=beaker_diameter,
resource_size_y=beaker_diameter,
name_prefix=name,
),
model="1Bottle100mlCarrier",
)
carrier.num_items_x = 1
carrier.num_items_y = 1
carrier.num_items_z = 1
carrier[0] = YB_ye_100ml_Bottle(f"{name}_flask_1")
return carrier
# 5ml分液瓶板 - 4x2布局8个位置
def YB_6x5ml_DispensingVialCarrier(name: str) -> BottleCarrier:
# 载架尺寸 (mm)
carrier_size_x = 127.8
carrier_size_y = 85.5
carrier_size_z = 50.0
# 瓶位尺寸
bottle_diameter = 15.0
bottle_spacing_x = 42.0 # X方向间距
bottle_spacing_y = 35.0 # Y方向间距
# 计算起始位置 (居中排列)
start_x = (carrier_size_x - (4 - 1) * bottle_spacing_x - bottle_diameter) / 2
start_y = (carrier_size_y - (2 - 1) * bottle_spacing_y - bottle_diameter) / 2
sites = create_ordered_items_2d(
klass=ResourceHolder,
num_items_x=4,
num_items_y=2,
dx=start_x,
dy=start_y,
dz=5.0,
item_dx=bottle_spacing_x,
item_dy=bottle_spacing_y,
size_x=bottle_diameter,
size_y=bottle_diameter,
size_z=carrier_size_z,
)
for k, v in sites.items():
v.name = f"{name}_{v.name}"
carrier = BottleCarrier(
name=name,
size_x=carrier_size_x,
size_y=carrier_size_y,
size_z=carrier_size_z,
sites=sites,
model="6x5ml_DispensingVialCarrier",
)
carrier.num_items_x = 4
carrier.num_items_y = 2
carrier.num_items_z = 1
ordering = ["A1", "A2", "A3", "A4", "B1", "B2", "B3", "B4"]
for i in range(8):
carrier[i] = YB_fen_ye_5ml_Bottle(f"{name}_vial_{ordering[i]}")
return carrier
# 20ml分液瓶板 - 4x2布局8个位置
def YB_6x20ml_DispensingVialCarrier(name: str) -> BottleCarrier:
# 载架尺寸 (mm)
carrier_size_x = 127.8
carrier_size_y = 85.5
carrier_size_z = 70.0
# 瓶位尺寸
bottle_diameter = 20.0
bottle_spacing_x = 42.0 # X方向间距
bottle_spacing_y = 35.0 # Y方向间距
# 计算起始位置 (居中排列)
start_x = (carrier_size_x - (4 - 1) * bottle_spacing_x - bottle_diameter) / 2
start_y = (carrier_size_y - (2 - 1) * bottle_spacing_y - bottle_diameter) / 2
sites = create_ordered_items_2d(
klass=ResourceHolder,
num_items_x=4,
num_items_y=2,
dx=start_x,
dy=start_y,
dz=5.0,
item_dx=bottle_spacing_x,
item_dy=bottle_spacing_y,
size_x=bottle_diameter,
size_y=bottle_diameter,
size_z=carrier_size_z,
)
for k, v in sites.items():
v.name = f"{name}_{v.name}"
carrier = BottleCarrier(
name=name,
size_x=carrier_size_x,
size_y=carrier_size_y,
size_z=carrier_size_z,
sites=sites,
model="6x20ml_DispensingVialCarrier",
)
carrier.num_items_x = 4
carrier.num_items_y = 2
carrier.num_items_z = 1
ordering = ["A1", "A2", "A3", "A4", "B1", "B2", "B3", "B4"]
for i in range(8):
carrier[i] = YB_fen_ye_20ml_Bottle(f"{name}_vial_{ordering[i]}")
return carrier
# 配液瓶(小)板 - 4x2布局8个位置
def YB_6x_SmallSolutionBottleCarrier(name: str) -> BottleCarrier:
# 载架尺寸 (mm)
carrier_size_x = 127.8
carrier_size_y = 85.5
carrier_size_z = 65.0
# 瓶位尺寸
bottle_diameter = 35.0
bottle_spacing_x = 42.0 # X方向间距
bottle_spacing_y = 35.0 # Y方向间距
# 计算起始位置 (居中排列)
start_x = (carrier_size_x - (4 - 1) * bottle_spacing_x - bottle_diameter) / 2
start_y = (carrier_size_y - (2 - 1) * bottle_spacing_y - bottle_diameter) / 2
sites = create_ordered_items_2d(
klass=ResourceHolder,
num_items_x=4,
num_items_y=2,
dx=start_x,
dy=start_y,
dz=5.0,
item_dx=bottle_spacing_x,
item_dy=bottle_spacing_y,
size_x=bottle_diameter,
size_y=bottle_diameter,
size_z=carrier_size_z,
)
for k, v in sites.items():
v.name = f"{name}_{v.name}"
carrier = BottleCarrier(
name=name,
size_x=carrier_size_x,
size_y=carrier_size_y,
size_z=carrier_size_z,
sites=sites,
model="6x_SmallSolutionBottleCarrier",
)
carrier.num_items_x = 4
carrier.num_items_y = 2
carrier.num_items_z = 1
ordering = ["A1", "A2", "A3", "A4", "B1", "B2", "B3", "B4"]
for i in range(8):
carrier[i] = YB_pei_ye_xiao_Bottle(f"{name}_bottle_{ordering[i]}")
return carrier
# 配液瓶(大)板 - 2x2布局4个位置
def YB_4x_LargeSolutionBottleCarrier(name: str) -> BottleCarrier:
# 载架尺寸 (mm)
carrier_size_x = 127.8
carrier_size_y = 85.5
carrier_size_z = 95.0
# 瓶位尺寸
bottle_diameter = 55.0
bottle_spacing_x = 60.0 # X方向间距
bottle_spacing_y = 60.0 # Y方向间距
# 计算起始位置 (居中排列)
start_x = (carrier_size_x - (2 - 1) * bottle_spacing_x - bottle_diameter) / 2
start_y = (carrier_size_y - (2 - 1) * bottle_spacing_y - bottle_diameter) / 2
sites = create_ordered_items_2d(
klass=ResourceHolder,
num_items_x=2,
num_items_y=2,
dx=start_x,
dy=start_y,
dz=5.0,
item_dx=bottle_spacing_x,
item_dy=bottle_spacing_y,
size_x=bottle_diameter,
size_y=bottle_diameter,
size_z=carrier_size_z,
)
for k, v in sites.items():
v.name = f"{name}_{v.name}"
carrier = BottleCarrier(
name=name,
size_x=carrier_size_x,
size_y=carrier_size_y,
size_z=carrier_size_z,
sites=sites,
model="4x_LargeSolutionBottleCarrier",
)
carrier.num_items_x = 2
carrier.num_items_y = 2
carrier.num_items_z = 1
ordering = ["A1", "A2", "B1", "B2"]
for i in range(4):
carrier[i] = YB_pei_ye_da_Bottle(f"{name}_bottle_{ordering[i]}")
return carrier
# 加样头(大)板 - 1x1布局1个位置
def YB_jia_yang_tou_da_1X1_carrier(name: str) -> BottleCarrier:
# 载架尺寸 (mm)
carrier_size_x = 127.8
carrier_size_y = 85.5
carrier_size_z = 95.0
# 瓶位尺寸
bottle_diameter = 35.0
bottle_spacing_x = 42.0 # X方向间距
bottle_spacing_y = 35.0 # Y方向间距
# 计算起始位置 (居中排列)
start_x = (carrier_size_x - (1 - 1) * bottle_spacing_x - bottle_diameter) / 2
start_y = (carrier_size_y - (1 - 1) * bottle_spacing_y - bottle_diameter) / 2
sites = create_ordered_items_2d(
klass=ResourceHolder,
num_items_x=1,
num_items_y=1,
dx=start_x,
dy=start_y,
dz=5.0,
item_dx=bottle_spacing_x,
item_dy=bottle_spacing_y,
size_x=bottle_diameter,
size_y=bottle_diameter,
size_z=carrier_size_z,
)
for k, v in sites.items():
v.name = f"{name}_{v.name}"
carrier = BottleCarrier(
name=name,
size_x=carrier_size_x,
size_y=carrier_size_y,
size_z=carrier_size_z,
sites=sites,
model="6x_LargeDispenseHeadCarrier",
)
carrier.num_items_x = 1
carrier.num_items_y = 1
carrier.num_items_z = 1
carrier[0] = YB_jia_yang_tou_da(f"{name}_head_1")
return carrier
def YB_AdapterBlock(name: str) -> BottleCarrier:
"""适配器块 - 单个中央位置"""
# 载架尺寸 (mm)
carrier_size_x = 127.8
carrier_size_y = 85.5
carrier_size_z = 30.0
# 适配器尺寸
adapter_diameter = 80.0
# 计算中央位置
center_x = (carrier_size_x - adapter_diameter) / 2
center_y = (carrier_size_y - adapter_diameter) / 2
center_z = 0.0
carrier = BottleCarrier(
name=name,
size_x=carrier_size_x,
size_y=carrier_size_y,
size_z=carrier_size_z,
sites=create_homogeneous_resources(
klass=ResourceHolder,
locations=[Coordinate(center_x, center_y, center_z)],
resource_size_x=adapter_diameter,
resource_size_y=adapter_diameter,
name_prefix=name,
),
model="AdapterBlock",
)
carrier.num_items_x = 1
carrier.num_items_y = 1
carrier.num_items_z = 1
# 适配器块本身不包含瓶子,只是一个支撑结构
return carrier
def YB_TipBox(name: str) -> BottleCarrier:
"""枪头盒 - 8x12布局96个位置"""
# 载架尺寸 (mm)
carrier_size_x = 127.8
carrier_size_y = 85.5
carrier_size_z = 55.0
# 枪头尺寸
tip_diameter = 10.0
tip_spacing_x = 9.0 # X方向间距
tip_spacing_y = 9.0 # Y方向间距
# 计算起始位置 (居中排列)
start_x = (carrier_size_x - (12 - 1) * tip_spacing_x - tip_diameter) / 2
start_y = (carrier_size_y - (8 - 1) * tip_spacing_y - tip_diameter) / 2
sites = create_ordered_items_2d(
klass=ResourceHolder,
num_items_x=12,
num_items_y=8,
dx=start_x,
dy=start_y,
dz=5.0,
item_dx=tip_spacing_x,
item_dy=tip_spacing_y,
size_x=tip_diameter,
size_y=tip_diameter,
size_z=carrier_size_z,
)
for k, v in sites.items():
v.name = f"{name}_{v.name}"
carrier = BottleCarrier(
name=name,
size_x=carrier_size_x,
size_y=carrier_size_y,
size_z=carrier_size_z,
sites=sites,
model="TipBox",
)
carrier.num_items_x = 12
carrier.num_items_y = 8
carrier.num_items_z = 1
# 创建96个枪头
for i in range(96):
row = chr(65 + i // 12) # A-H
col = (i % 12) + 1 # 1-12
carrier[i] = YB_Pipette_Tip(f"{name}_tip_{row}{col}")
return carrier

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from unilabos.resources.itemized_carrier import Bottle, BottleCarrier
# 工厂函数
"""加样头(大)"""
def YB_jia_yang_tou_da(
name: str,
diameter: float = 20.0,
height: float = 100.0,
max_volume: float = 30000.0, # 30mL
barcode: str = None,
) -> Bottle:
"""创建粉末瓶"""
return Bottle(
name=name,
diameter=diameter,# 未知
height=height,
max_volume=max_volume,
barcode=barcode,
model="Solid_Stock",
)
"""液1x1"""
def YB_ye_Bottle(
name: str,
diameter: float = 40.0,
height: float = 70.0,
max_volume: float = 50000.0, # 50mL
barcode: str = None,
) -> Bottle:
"""创建液体瓶"""
return Bottle(
name=name,
diameter=diameter,
height=height,
max_volume=max_volume,
barcode=barcode,
model="Liquid_Bottle",
)
"""100ml液体"""
def YB_ye_100ml_Bottle(
name: str,
diameter: float = 50.0,
height: float = 90.0,
max_volume: float = 100000.0, # 100mL
barcode: str = None,
) -> Bottle:
"""创建100ml液体瓶"""
return Bottle(
name=name,
diameter=diameter,
height=height,
max_volume=max_volume,
barcode=barcode,
model="Liquid_Bottle_100ml",
)
"""高粘液"""
def YB_gao_nian_ye_Bottle(
name: str,
diameter: float = 40.0,
height: float = 70.0,
max_volume: float = 50000.0, # 50mL
barcode: str = None,
) -> Bottle:
"""创建高粘液瓶"""
return Bottle(
name=name,
diameter=diameter,
height=height,
max_volume=max_volume,
barcode=barcode,
model="High_Viscosity_Liquid",
)
"""5ml分液瓶"""
def YB_fen_ye_5ml_Bottle(
name: str,
diameter: float = 20.0,
height: float = 50.0,
max_volume: float = 5000.0, # 5mL
barcode: str = None,
) -> Bottle:
"""创建5ml分液瓶"""
return Bottle(
name=name,
diameter=diameter,
height=height,
max_volume=max_volume,
barcode=barcode,
model="Separation_Bottle_5ml",
)
"""20ml分液瓶"""
def YB_fen_ye_20ml_Bottle(
name: str,
diameter: float = 30.0,
height: float = 65.0,
max_volume: float = 20000.0, # 20mL
barcode: str = None,
) -> Bottle:
"""创建20ml分液瓶"""
return Bottle(
name=name,
diameter=diameter,
height=height,
max_volume=max_volume,
barcode=barcode,
model="Separation_Bottle_20ml",
)
"""配液瓶(小)"""
def YB_pei_ye_xiao_Bottle(
name: str,
diameter: float = 35.0,
height: float = 60.0,
max_volume: float = 30000.0, # 30mL
barcode: str = None,
) -> Bottle:
"""创建配液瓶(小)"""
return Bottle(
name=name,
diameter=diameter,
height=height,
max_volume=max_volume,
barcode=barcode,
model="Mixing_Bottle_Small",
)
"""配液瓶(大)"""
def YB_pei_ye_da_Bottle(
name: str,
diameter: float = 55.0,
height: float = 100.0,
max_volume: float = 150000.0, # 150mL
barcode: str = None,
) -> Bottle:
"""创建配液瓶(大)"""
return Bottle(
name=name,
diameter=diameter,
height=height,
max_volume=max_volume,
barcode=barcode,
model="Mixing_Bottle_Large",
)
"""枪头"""
def YB_Pipette_Tip(
name: str,
diameter: float = 10.0,
height: float = 50.0,
max_volume: float = 1000.0, # 1mL
barcode: str = None,
) -> Bottle:
"""创建枪头"""
return Bottle(
name=name,
diameter=diameter,
height=height,
max_volume=max_volume,
barcode=barcode,
model="Pipette_Tip",
)

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from unilabos.resources.warehouse import WareHouse, YB_warehouse_factory
def bioyond_warehouse_1x4x4(name: str) -> WareHouse:
"""创建BioYond 4x1x4仓库"""
return YB_warehouse_factory(
name=name,
num_items_x=1,
num_items_y=4,
num_items_z=4,
dx=10.0,
dy=10.0,
dz=10.0,
item_dx=137.0,
item_dy=96.0,
item_dz=120.0,
category="warehouse",
)
def bioyond_warehouse_1x4x2(name: str) -> WareHouse:
"""创建BioYond 4x1x2仓库"""
return YB_warehouse_factory(
name=name,
num_items_x=1,
num_items_y=4,
num_items_z=2,
dx=10.0,
dy=10.0,
dz=10.0,
item_dx=137.0,
item_dy=96.0,
item_dz=120.0,
category="warehouse",
removed_positions=None
)
# 定义benyond的堆栈
def bioyond_warehouse_1x2x2(name: str) -> WareHouse:
"""创建BioYond 4x1x4仓库"""
return YB_warehouse_factory(
name=name,
num_items_x=2,
num_items_y=2,
num_items_z=1,
dx=10.0,
dy=10.0,
dz=10.0,
item_dx=137.0,
item_dy=96.0,
item_dz=120.0,
category="YB_warehouse",
)
def bioyond_warehouse_2x2x1(name: str) -> WareHouse:
"""创建BioYond 2x2x1仓库自动堆栈"""
return YB_warehouse_factory(
name=name,
num_items_x=2,
num_items_y=2,
num_items_z=1,
dx=10.0,
dy=10.0,
dz=10.0,
item_dx=137.0,
item_dy=96.0,
item_dz=120.0,
category="YB_warehouse",
)
def bioyond_warehouse_10x1x1(name: str) -> WareHouse:
"""创建BioYond 4x1x4仓库"""
return YB_warehouse_factory(
name=name,
num_items_x=10,
num_items_y=1,
num_items_z=1,
dx=10.0,
dy=10.0,
dz=10.0,
item_dx=137.0,
item_dy=96.0,
item_dz=120.0,
category="warehouse",
)
def bioyond_warehouse_1x3x3(name: str) -> WareHouse:
"""创建BioYond 4x1x4仓库"""
return YB_warehouse_factory(
name=name,
num_items_x=1,
num_items_y=3,
num_items_z=3,
dx=10.0,
dy=10.0,
dz=10.0,
item_dx=137.0,
item_dy=96.0,
item_dz=120.0,
category="warehouse",
)
def bioyond_warehouse_2x1x3(name: str) -> WareHouse:
"""创建BioYond 4x1x4仓库"""
return YB_warehouse_factory(
name=name,
num_items_x=2,
num_items_y=1,
num_items_z=3,
dx=10.0,
dy=10.0,
dz=10.0,
item_dx=137.0,
item_dy=96.0,
item_dz=120.0,
category="warehouse",
)
def bioyond_warehouse_3x3x1(name: str) -> WareHouse:
"""创建BioYond 4x1x4仓库"""
return YB_warehouse_factory(
name=name,
num_items_x=3,
num_items_y=3,
num_items_z=1,
dx=10.0,
dy=10.0,
dz=10.0,
item_dx=137.0,
item_dy=96.0,
item_dz=120.0,
category="warehouse",
)
def bioyond_warehouse_5x1x1(name: str) -> WareHouse:
"""创建BioYond 4x1x4仓库"""
return YB_warehouse_factory(
name=name,
num_items_x=5,
num_items_y=1,
num_items_z=1,
dx=10.0,
dy=10.0,
dz=10.0,
item_dx=137.0,
item_dy=96.0,
item_dz=120.0,
category="warehouse",
)
def bioyond_warehouse_3x3x1_2(name: str) -> WareHouse:
"""创建BioYond 4x1x4仓库"""
return YB_warehouse_factory(
name=name,
num_items_x=3,
num_items_y=3,
num_items_z=1,
dx=12.0,
dy=12.0,
dz=12.0,
item_dx=137.0,
item_dy=96.0,
item_dz=120.0,
category="warehouse",
)
def bioyond_warehouse_liquid_and_lid_handling(name: str) -> WareHouse:
"""创建BioYond开关盖加液模块台面"""
return YB_warehouse_factory(
name=name,
num_items_x=2,
num_items_y=5,
num_items_z=1,
dx=10.0,
dy=10.0,
dz=10.0,
item_dx=137.0,
item_dy=96.0,
item_dz=120.0,
category="warehouse",
removed_positions=None
)
def bioyond_warehouse_3x5x1(name: str) -> WareHouse:
"""创建BioYond 3x5x1仓库手动堆栈"""
return YB_warehouse_factory(
name=name,
num_items_x=3,
num_items_y=5,
num_items_z=1,
dx=10.0,
dy=10.0,
dz=10.0,
item_dx=137.0,
item_dy=96.0,
item_dz=120.0,
category="warehouse",
)
def bioyond_warehouse_20x1x1(name: str) -> WareHouse:
"""创建BioYond 20x1x1仓库粉末加样头堆栈"""
return YB_warehouse_factory(
name=name,
num_items_x=20,
num_items_y=1,
num_items_z=1,
dx=10.0,
dy=10.0,
dz=10.0,
item_dx=137.0,
item_dy=96.0,
item_dz=120.0,
category="warehouse",
)

View File

@@ -1,276 +0,0 @@
from pylabrobot.resources import create_homogeneous_resources, Coordinate, ResourceHolder, create_ordered_items_2d
from unilabos.resources.itemized_carrier import Bottle, BottleCarrier
from unilabos.resources.bioyond.bottles import (
BIOYOND_PolymerStation_Solid_Stock,
BIOYOND_PolymerStation_Solid_Vial,
BIOYOND_PolymerStation_Liquid_Vial,
BIOYOND_PolymerStation_Solution_Beaker,
BIOYOND_PolymerStation_Reagent_Bottle
)
# 命名约定:试剂瓶-Bottle烧杯-Beaker烧瓶-Flask小瓶-Vial
def BIOYOND_Electrolyte_6VialCarrier(name: str) -> BottleCarrier:
"""6瓶载架 - 2x3布局"""
# 载架尺寸 (mm)
carrier_size_x = 127.8
carrier_size_y = 85.5
carrier_size_z = 50.0
# 瓶位尺寸
bottle_diameter = 30.0
bottle_spacing_x = 42.0 # X方向间距
bottle_spacing_y = 35.0 # Y方向间距
# 计算起始位置 (居中排列)
start_x = (carrier_size_x - (3 - 1) * bottle_spacing_x - bottle_diameter) / 2
start_y = (carrier_size_y - (2 - 1) * bottle_spacing_y - bottle_diameter) / 2
sites = create_ordered_items_2d(
klass=ResourceHolder,
num_items_x=3,
num_items_y=2,
dx=start_x,
dy=start_y,
dz=5.0,
item_dx=bottle_spacing_x,
item_dy=bottle_spacing_y,
size_x=bottle_diameter,
size_y=bottle_diameter,
size_z=carrier_size_z,
)
for k, v in sites.items():
v.name = f"{name}_{v.name}"
carrier = BottleCarrier(
name=name,
size_x=carrier_size_x,
size_y=carrier_size_y,
size_z=carrier_size_z,
sites=sites,
model="BIOYOND_Electrolyte_6VialCarrier",
)
carrier.num_items_x = 3
carrier.num_items_y = 2
carrier.num_items_z = 1
for i in range(6):
carrier[i] = BIOYOND_PolymerStation_Solid_Vial(f"{name}_vial_{i+1}")
return carrier
def BIOYOND_Electrolyte_1BottleCarrier(name: str) -> BottleCarrier:
"""1瓶载架 - 单个中央位置"""
# 载架尺寸 (mm)
carrier_size_x = 127.8
carrier_size_y = 85.5
carrier_size_z = 100.0
# 烧杯尺寸
beaker_diameter = 80.0
# 计算中央位置
center_x = (carrier_size_x - beaker_diameter) / 2
center_y = (carrier_size_y - beaker_diameter) / 2
center_z = 5.0
carrier = BottleCarrier(
name=name,
size_x=carrier_size_x,
size_y=carrier_size_y,
size_z=carrier_size_z,
sites=create_homogeneous_resources(
klass=ResourceHolder,
locations=[Coordinate(center_x, center_y, center_z)],
resource_size_x=beaker_diameter,
resource_size_y=beaker_diameter,
name_prefix=name,
),
model="BIOYOND_Electrolyte_1BottleCarrier",
)
carrier.num_items_x = 1
carrier.num_items_y = 1
carrier.num_items_z = 1
carrier[0] = BIOYOND_PolymerStation_Solution_Beaker(f"{name}_beaker_1")
return carrier
def BIOYOND_PolymerStation_6StockCarrier(name: str) -> BottleCarrier:
"""6瓶载架 - 2x3布局"""
# 载架尺寸 (mm)
carrier_size_x = 127.8
carrier_size_y = 85.5
carrier_size_z = 50.0
# 瓶位尺寸
bottle_diameter = 20.0
bottle_spacing_x = 42.0 # X方向间距
bottle_spacing_y = 35.0 # Y方向间距
# 计算起始位置 (居中排列)
start_x = (carrier_size_x - (3 - 1) * bottle_spacing_x - bottle_diameter) / 2
start_y = (carrier_size_y - (2 - 1) * bottle_spacing_y - bottle_diameter) / 2
sites = create_ordered_items_2d(
klass=ResourceHolder,
num_items_x=3,
num_items_y=2,
dx=start_x,
dy=start_y,
dz=5.0,
item_dx=bottle_spacing_x,
item_dy=bottle_spacing_y,
size_x=bottle_diameter,
size_y=bottle_diameter,
size_z=carrier_size_z,
)
for k, v in sites.items():
v.name = f"{name}_{v.name}"
carrier = BottleCarrier(
name=name,
size_x=carrier_size_x,
size_y=carrier_size_y,
size_z=carrier_size_z,
sites=sites,
model="BIOYOND_PolymerStation_6VialCarrier",
)
carrier.num_items_x = 3
carrier.num_items_y = 2
carrier.num_items_z = 1
ordering = ["A1", "A2", "A3", "B1", "B2", "B3"] # 自定义顺序
for i in range(6):
carrier[i] = BIOYOND_PolymerStation_Solid_Stock(f"{name}_vial_{ordering[i]}")
return carrier
def BIOYOND_PolymerStation_6VialCarrier(name: str) -> BottleCarrier:
"""6瓶载架 - 2x3布局"""
# 载架尺寸 (mm)
carrier_size_x = 127.8
carrier_size_y = 85.5
carrier_size_z = 50.0
# 瓶位尺寸
bottle_diameter = 30.0
bottle_spacing_x = 42.0 # X方向间距
bottle_spacing_y = 35.0 # Y方向间距
# 计算起始位置 (居中排列)
start_x = (carrier_size_x - (3 - 1) * bottle_spacing_x - bottle_diameter) / 2
start_y = (carrier_size_y - (2 - 1) * bottle_spacing_y - bottle_diameter) / 2
sites = create_ordered_items_2d(
klass=ResourceHolder,
num_items_x=3,
num_items_y=2,
dx=start_x,
dy=start_y,
dz=5.0,
item_dx=bottle_spacing_x,
item_dy=bottle_spacing_y,
size_x=bottle_diameter,
size_y=bottle_diameter,
size_z=carrier_size_z,
)
for k, v in sites.items():
v.name = f"{name}_{v.name}"
carrier = BottleCarrier(
name=name,
size_x=carrier_size_x,
size_y=carrier_size_y,
size_z=carrier_size_z,
sites=sites,
model="BIOYOND_PolymerStation_6VialCarrier",
)
carrier.num_items_x = 3
carrier.num_items_y = 2
carrier.num_items_z = 1
ordering = ["A1", "A2", "A3", "B1", "B2", "B3"] # 自定义顺序
for i in range(3):
carrier[i] = BIOYOND_PolymerStation_Solid_Vial(f"{name}_solidvial_{ordering[i]}")
for i in range(3, 6):
carrier[i] = BIOYOND_PolymerStation_Liquid_Vial(f"{name}_liquidvial_{ordering[i]}")
return carrier
def BIOYOND_PolymerStation_1BottleCarrier(name: str) -> BottleCarrier:
"""1瓶载架 - 单个中央位置"""
# 载架尺寸 (mm)
carrier_size_x = 127.8
carrier_size_y = 85.5
carrier_size_z = 20.0
# 烧杯尺寸
beaker_diameter = 60.0
# 计算中央位置
center_x = (carrier_size_x - beaker_diameter) / 2
center_y = (carrier_size_y - beaker_diameter) / 2
center_z = 5.0
carrier = BottleCarrier(
name=name,
size_x=carrier_size_x,
size_y=carrier_size_y,
size_z=carrier_size_z,
sites=create_homogeneous_resources(
klass=ResourceHolder,
locations=[Coordinate(center_x, center_y, center_z)],
resource_size_x=beaker_diameter,
resource_size_y=beaker_diameter,
name_prefix=name,
),
model="BIOYOND_PolymerStation_1BottleCarrier",
)
carrier.num_items_x = 1
carrier.num_items_y = 1
carrier.num_items_z = 1
carrier[0] = BIOYOND_PolymerStation_Reagent_Bottle(f"{name}_flask_1")
return carrier
def BIOYOND_PolymerStation_1FlaskCarrier(name: str) -> BottleCarrier:
"""1瓶载架 - 单个中央位置"""
# 载架尺寸 (mm)
carrier_size_x = 127.8
carrier_size_y = 85.5
carrier_size_z = 20.0
# 烧杯尺寸
beaker_diameter = 70.0
# 计算中央位置
center_x = (carrier_size_x - beaker_diameter) / 2
center_y = (carrier_size_y - beaker_diameter) / 2
center_z = 5.0
carrier = BottleCarrier(
name=name,
size_x=carrier_size_x,
size_y=carrier_size_y,
size_z=carrier_size_z,
sites=create_homogeneous_resources(
klass=ResourceHolder,
locations=[Coordinate(center_x, center_y, center_z)],
resource_size_x=beaker_diameter,
resource_size_y=beaker_diameter,
name_prefix=name,
),
model="BIOYOND_PolymerStation_1FlaskCarrier",
)
carrier.num_items_x = 1
carrier.num_items_y = 1
carrier.num_items_z = 1
carrier[0] = BIOYOND_PolymerStation_Reagent_Bottle(f"{name}_bottle_1")
return carrier

View File

@@ -1,92 +0,0 @@
from unilabos.resources.itemized_carrier import Bottle, BottleCarrier
# 工厂函数
def BIOYOND_PolymerStation_Solid_Stock(
name: str,
diameter: float = 20.0,
height: float = 100.0,
max_volume: float = 30000.0, # 30mL
barcode: str = None,
) -> Bottle:
"""创建粉末瓶"""
return Bottle(
name=name,
diameter=diameter,
height=height,
max_volume=max_volume,
barcode=barcode,
model="BIOYOND_PolymerStation_Solid_Stock",
)
def BIOYOND_PolymerStation_Solid_Vial(
name: str,
diameter: float = 25.0,
height: float = 60.0,
max_volume: float = 30000.0, # 30mL
barcode: str = None,
) -> Bottle:
"""创建粉末瓶"""
return Bottle(
name=name,
diameter=diameter,
height=height,
max_volume=max_volume,
barcode=barcode,
model="BIOYOND_PolymerStation_Solid_Vial",
)
def BIOYOND_PolymerStation_Liquid_Vial(
name: str,
diameter: float = 25.0,
height: float = 60.0,
max_volume: float = 30000.0, # 30mL
barcode: str = None,
) -> Bottle:
"""创建滴定液瓶"""
return Bottle(
name=name,
diameter=diameter,
height=height,
max_volume=max_volume,
barcode=barcode,
model="BIOYOND_PolymerStation_Liquid_Vial",
)
def BIOYOND_PolymerStation_Solution_Beaker(
name: str,
diameter: float = 60.0,
height: float = 70.0,
max_volume: float = 200000.0, # 200mL
barcode: str = None,
) -> Bottle:
"""创建溶液烧杯"""
return Bottle(
name=name,
diameter=diameter,
height=height,
max_volume=max_volume,
barcode=barcode,
model="BIOYOND_PolymerStation_Solution_Beaker",
)
def BIOYOND_PolymerStation_Reagent_Bottle(
name: str,
diameter: float = 70.0,
height: float = 120.0,
max_volume: float = 500000.0, # 500mL
barcode: str = None,
) -> Bottle:
"""创建试剂瓶"""
return Bottle(
name=name,
diameter=diameter,
height=height,
max_volume=max_volume,
barcode=barcode,
model="BIOYOND_PolymerStation_Reagent_Bottle",
)

View File

@@ -1,6 +1,7 @@
from os import name
from pylabrobot.resources import Deck, Coordinate, Rotation
from unilabos.resources.bioyond.warehouses import bioyond_warehouse_1x4x4, bioyond_warehouse_1x4x2, bioyond_warehouse_liquid_and_lid_handling
from unilabos.resources.bioyond.YB_warehouses import bioyond_warehouse_1x4x4, bioyond_warehouse_1x4x2, bioyond_warehouse_liquid_and_lid_handling, bioyond_warehouse_1x2x2, bioyond_warehouse_1x3x3, bioyond_warehouse_10x1x1, bioyond_warehouse_3x3x1, bioyond_warehouse_3x3x1_2, bioyond_warehouse_5x1x1, bioyond_warehouse_20x1x1, bioyond_warehouse_2x2x1, bioyond_warehouse_3x5x1
class BIOYOND_PolymerReactionStation_Deck(Deck):
@@ -66,3 +67,52 @@ class BIOYOND_PolymerPreparationStation_Deck(Deck):
for warehouse_name, warehouse in self.warehouses.items():
self.assign_child_resource(warehouse, location=self.warehouse_locations[warehouse_name])
class BIOYOND_YB_Deck(Deck):
def __init__(
self,
name: str = "YB_Deck",
size_x: float = 4150,
size_y: float = 1400.0,
size_z: float = 2670.0,
category: str = "deck",
setup: bool = False
) -> None:
super().__init__(name=name, size_x=4150.0, size_y=1400.0, size_z=2670.0)
if setup:
self.setup()
def setup(self) -> None:
# 添加仓库
self.warehouses = {
"自动堆栈-左": bioyond_warehouse_2x2x1("自动堆栈-左"),
"自动堆栈-右": bioyond_warehouse_2x2x1("自动堆栈-右"),
"手动堆栈-左": bioyond_warehouse_3x5x1("手动堆栈-左"),
"手动堆栈-右": bioyond_warehouse_3x5x1("手动堆栈-右"),
"粉末加样头堆栈": bioyond_warehouse_20x1x1("粉末加样头堆栈"),
"配液站内试剂仓库": bioyond_warehouse_3x3x1("配液站内试剂仓库"),
"试剂替换仓库": bioyond_warehouse_10x1x1("试剂替换仓库"),
}
# warehouse 的位置
self.warehouse_locations = {
"自动堆栈-左": Coordinate(-300.0, 158.0, 0.0),
"自动堆栈-右": Coordinate(4160.0, 158.0, 0.0),
"手动堆栈-左": Coordinate(-400.0, 877.0, 0.0),
"手动堆栈-右": Coordinate(4160.0, 877.0, 0.0),
"粉末加样头堆栈": Coordinate(385.0, 1300.0, 0.0),
"配液站内试剂仓库": Coordinate(1164.0, 676.0, 0.0),
"试剂替换仓库": Coordinate(2717.0, 676.0, 0.0),
}
for warehouse_name, warehouse in self.warehouses.items():
self.assign_child_resource(warehouse, location=self.warehouse_locations[warehouse_name])
def YB_Deck(name: str) -> Deck:
by=BIOYOND_YB_Deck(name=name)
by.setup()
return by

View File

@@ -1,54 +0,0 @@
from unilabos.resources.warehouse import WareHouse, warehouse_factory
def bioyond_warehouse_1x4x4(name: str) -> WareHouse:
"""创建BioYond 4x1x4仓库"""
return warehouse_factory(
name=name,
num_items_x=1,
num_items_y=4,
num_items_z=4,
dx=10.0,
dy=10.0,
dz=10.0,
item_dx=137.0,
item_dy=96.0,
item_dz=120.0,
category="warehouse",
)
def bioyond_warehouse_1x4x2(name: str) -> WareHouse:
"""创建BioYond 4x1x2仓库"""
return warehouse_factory(
name=name,
num_items_x=1,
num_items_y=4,
num_items_z=2,
dx=10.0,
dy=10.0,
dz=10.0,
item_dx=137.0,
item_dy=96.0,
item_dz=120.0,
category="warehouse",
removed_positions=None
)
def bioyond_warehouse_liquid_and_lid_handling(name: str) -> WareHouse:
"""创建BioYond开关盖加液模块台面"""
return warehouse_factory(
name=name,
num_items_x=2,
num_items_y=5,
num_items_z=1,
dx=10.0,
dy=10.0,
dz=10.0,
item_dx=137.0,
item_dy=96.0,
item_dz=120.0,
category="warehouse",
removed_positions=None
)

View File

@@ -1,67 +1,84 @@
import json
from typing import Dict, Any
from pylabrobot.resources import Container
from unilabos_msgs.msg import Resource
from unilabos.ros.msgs.message_converter import convert_from_ros_msg
class RegularContainer(object):
# 第一个参数必须是id传入
# noinspection PyShadowingBuiltins
def __init__(self, id: str):
self.id = id
self.ulr_resource = Resource()
self._data = None
class RegularContainer(Container):
def __init__(self, *args, **kwargs):
if "size_x" not in kwargs:
kwargs["size_x"] = 0
if "size_y" not in kwargs:
kwargs["size_y"] = 0
if "size_z" not in kwargs:
kwargs["size_z"] = 0
self.kwargs = kwargs
self.state = {}
super().__init__(*args, **kwargs)
@property
def ulr_resource_data(self):
if self._data is None:
self._data = json.loads(self.ulr_resource.data) if self.ulr_resource.data else {}
return self._data
@ulr_resource_data.setter
def ulr_resource_data(self, value: dict):
self._data = value
self.ulr_resource.data = json.dumps(self._data)
@property
def liquid_type(self):
return self.ulr_resource_data.get("liquid_type", None)
@liquid_type.setter
def liquid_type(self, value: str):
if value is not None:
self.ulr_resource_data["liquid_type"] = value
else:
self.ulr_resource_data.pop("liquid_type", None)
@property
def liquid_volume(self):
return self.ulr_resource_data.get("liquid_volume", None)
@liquid_volume.setter
def liquid_volume(self, value: float):
if value is not None:
self.ulr_resource_data["liquid_volume"] = value
else:
self.ulr_resource_data.pop("liquid_volume", None)
def get_ulr_resource(self) -> Resource:
"""
获取UlrResource对象
:return: UlrResource对象
"""
self.ulr_resource_data = self.ulr_resource_data # 确保数据被更新
return self.ulr_resource
def get_ulr_resource_as_dict(self) -> Resource:
"""
获取UlrResource对象
:return: UlrResource对象
"""
to_dict = convert_from_ros_msg(self.get_ulr_resource())
to_dict["type"] = "container"
return to_dict
def __str__(self):
return f"{self.id}"
def load_state(self, state: Dict[str, Any]):
self.state = state
#
# class RegularContainer(object):
# # 第一个参数必须是id传入
# # noinspection PyShadowingBuiltins
# def __init__(self, id: str):
# self.id = id
# self.ulr_resource = Resource()
# self._data = None
#
# @property
# def ulr_resource_data(self):
# if self._data is None:
# self._data = json.loads(self.ulr_resource.data) if self.ulr_resource.data else {}
# return self._data
#
# @ulr_resource_data.setter
# def ulr_resource_data(self, value: dict):
# self._data = value
# self.ulr_resource.data = json.dumps(self._data)
#
# @property
# def liquid_type(self):
# return self.ulr_resource_data.get("liquid_type", None)
#
# @liquid_type.setter
# def liquid_type(self, value: str):
# if value is not None:
# self.ulr_resource_data["liquid_type"] = value
# else:
# self.ulr_resource_data.pop("liquid_type", None)
#
# @property
# def liquid_volume(self):
# return self.ulr_resource_data.get("liquid_volume", None)
#
# @liquid_volume.setter
# def liquid_volume(self, value: float):
# if value is not None:
# self.ulr_resource_data["liquid_volume"] = value
# else:
# self.ulr_resource_data.pop("liquid_volume", None)
#
# def get_ulr_resource(self) -> Resource:
# """
# 获取UlrResource对象
# :return: UlrResource对象
# """
# self.ulr_resource_data = self.ulr_resource_data # 确保数据被更新
# return self.ulr_resource
#
# def get_ulr_resource_as_dict(self) -> Resource:
# """
# 获取UlrResource对象
# :return: UlrResource对象
# """
# to_dict = convert_from_ros_msg(self.get_ulr_resource())
# to_dict["type"] = "container"
# return to_dict
#
# def __str__(self):
# return f"{self.id}"

View File

@@ -1,18 +1,23 @@
import importlib
import inspect
import json
import os.path
import traceback
from typing import Union, Any, Dict, List
from typing import Union, Any, Dict, List, Tuple
import uuid
import networkx as nx
from pylabrobot.resources import ResourceHolder
from unilabos_msgs.msg import Resource
from unilabos.config.config import BasicConfig
from unilabos.resources.container import RegularContainer
from unilabos.resources.itemized_carrier import ItemizedCarrier
from unilabos.ros.msgs.message_converter import convert_to_ros_msg
from unilabos.ros.nodes.resource_tracker import (
ResourceDictInstance,
ResourceTreeSet,
)
from unilabos.utils import logger
from unilabos.utils.banner_print import print_status
try:
@@ -44,6 +49,33 @@ def canonicalize_nodes_data(
if node.get("label") is not None:
node_id = node.pop("label")
node["id"] = node["name"] = node_id
if not isinstance(node.get("config"), dict):
node["config"] = {}
if not node.get("type"):
node["type"] = "device"
print_status(f"Warning: Node {node.get('id', 'unknown')} missing 'type', defaulting to 'device'", "warning")
if node.get("name", None) is None:
node["name"] = node.get("id")
print_status(f"Warning: Node {node.get('id', 'unknown')} missing 'name', defaulting to {node['name']}", "warning")
if not isinstance(node.get("position"), dict):
node["position"] = {"position": {}}
x = node.pop("x", None)
if x is not None:
node["position"]["position"]["x"] = x
y = node.pop("y", None)
if y is not None:
node["position"]["position"]["y"] = y
z = node.pop("z", None)
if z is not None:
node["position"]["position"]["z"] = z
if "sample_id" in node:
sample_id = node.pop("sample_id")
if sample_id:
logger.error(f"{node}的sample_id参数已弃用sample_id: {sample_id}")
for k in list(node.keys()):
if k not in ["id", "uuid", "name", "description", "schema", "model", "icon", "parent_uuid", "parent", "type", "class", "position", "config", "data", "children"]:
v = node.pop(k)
node["config"][k] = v
# 第二步处理parent_relation
id2idx = {node["id"]: idx for idx, node in enumerate(nodes)}
@@ -301,6 +333,10 @@ def read_graphml(graphml_file: str) -> tuple[nx.Graph, ResourceTreeSet, List[Dic
"nodes": [node.res_content.model_dump(by_alias=True) for node in resource_tree_set.all_nodes],
"links": standardized_links,
}
dump_json_path = os.path.join(BasicConfig.working_dir, os.path.basename(graphml_file).rsplit(".")[0] + ".json")
with open(dump_json_path, "w", encoding="utf-8") as f:
f.write(json.dumps(graph_data, indent=4, ensure_ascii=False))
print_status(f"GraphML converted to JSON and saved to {dump_json_path}", "info")
physical_setup_graph = nx.node_link_graph(graph_data, link="links", multigraph=False)
handle_communications(physical_setup_graph)
@@ -499,6 +535,7 @@ def resource_ulab_to_plr(resource: dict, plr_model=False) -> "ResourcePLR":
def resource_ulab_to_plr_inner(resource: dict):
all_states[resource["name"]] = resource["data"]
extra = resource.pop("extra", {})
d = {
"name": resource["name"],
"type": resource["type"],
@@ -539,16 +576,16 @@ def resource_plr_to_ulab(resource_plr: "ResourcePLR", parent_name: str = None, w
replace_info = {
"plate": "plate",
"well": "well",
"tip_spot": "container",
"trash": "container",
"tip_spot": "tip_spot",
"trash": "trash",
"deck": "deck",
"tip_rack": "container",
"tip_rack": "tip_rack",
}
if source in replace_info:
return replace_info[source]
else:
print("转换pylabrobot的时候出现未知类型", source)
return "container"
return source
def resource_plr_to_ulab_inner(d: dict, all_states: dict, child=True) -> dict:
r = {
@@ -576,51 +613,55 @@ def resource_plr_to_ulab(resource_plr: "ResourcePLR", parent_name: str = None, w
return r
def resource_bioyond_to_plr(bioyond_materials: list[dict], type_mapping: dict = {}, deck: Any = None) -> list[dict]:
def resource_bioyond_to_plr(bioyond_materials: list[dict], type_mapping: Dict[str, Tuple[str, str]] = {}, deck: Any = None) -> list[dict]:
"""
将 bioyond 物料格式转换为 ulab 物料格式
Args:
bioyond_materials: bioyond 系统的物料查询结果列表
type_mapping: 物料类型映射字典,格式 {bioyond_type: plr_class_name}
type_mapping: 物料类型映射字典,格式 {bioyond_type: [plr_class_name, class_uuid]}
location_id_mapping: 库位 ID 到名称的映射字典,格式 {location_id: location_name}
Returns:
pylabrobot 格式的物料列表
"""
print("1:bioyond_materials:",bioyond_materials)
# print("2:type_mapping:",type_mapping)
plr_materials = []
for material in bioyond_materials:
className = (
type_mapping.get(material.get("typeName"), "RegularContainer") if type_mapping else "RegularContainer"
type_mapping.get(material.get("typeName"), ("RegularContainer", ""))[0] if type_mapping else "RegularContainer"
)
plr_material: ResourcePLR = initialize_resource(
{"name": material["name"], "class": className}, resource_type=ResourcePLR
)
print("plr_material:",plr_material)
print("code:",material.get("code", ""))
plr_material.code = material.get("code", "") and material.get("barCode", "") or ""
plr_material.unilabos_uuid = str(uuid.uuid4())
# 处理子物料detail
if material.get("detail") and len(material["detail"]) > 0:
for bottle in reversed(plr_material.children):
plr_material.unassign_child_resource(bottle)
child_ids = []
for detail in material["detail"]:
number = (
(detail.get("z", 0) - 1) * plr_material.num_items_x * plr_material.num_items_y
+ (detail.get("x", 0) - 1) * plr_material.num_items_x
+ (detail.get("y", 0) - 1)
+ (detail.get("y", 0) - 1) * plr_material.num_items_y
+ (detail.get("x", 0) - 1)
)
bottle = plr_material[number]
if detail["name"] in type_mapping:
# plr_material.unassign_child_resource(bottle)
plr_material.sites[number] = None
plr_material[number] = initialize_resource(
{"name": f'{detail["name"]}_{number}', "class": type_mapping[detail["name"]]}, resource_type=ResourcePLR
typeName = detail.get("typeName", detail.get("name", ""))
if typeName in type_mapping:
bottle = plr_material[number] = initialize_resource(
{"name": f'{detail["name"]}_{number}', "class": type_mapping[typeName][0]}, resource_type=ResourcePLR
)
else:
bottle.tracker.liquids = [
(detail["name"], float(detail.get("quantity", 0)) if detail.get("quantity") else 0)
]
bottle.code = detail.get("code", "")
bottle.code = detail.get("code", "")
else:
bottle = plr_material[0] if plr_material.capacity > 0 else plr_material
bottle.tracker.liquids = [
@@ -645,32 +686,59 @@ def resource_bioyond_to_plr(bioyond_materials: list[dict], type_mapping: dict =
return plr_materials
def resource_plr_to_bioyond(plr_materials: list[ResourcePLR], type_mapping: dict = {}, warehouse_mapping: dict = {}) -> list[dict]:
def resource_plr_to_bioyond(plr_resources: list[ResourcePLR], type_mapping: dict = {}, warehouse_mapping: dict = {}) -> list[dict]:
bioyond_materials = []
for plr_material in plr_materials:
material = {
"name": plr_material.name,
"typeName": plr_material.__class__.__name__,
"code": plr_material.code,
"quantity": 0,
"detail": [],
"locations": [],
}
if hasattr(plr_material, "capacity") and plr_material.capacity > 1:
for idx in range(plr_material.capacity):
bottle = plr_material[idx]
detail = {
"x": (idx // (plr_material.num_items_x * plr_material.num_items_y)) + 1,
"y": ((idx % (plr_material.num_items_x * plr_material.num_items_y)) // plr_material.num_items_x) + 1,
"z": (idx % plr_material.num_items_x) + 1,
for resource in plr_resources:
if hasattr(resource, "capacity") and resource.capacity > 1:
material = {
"typeId": type_mapping.get(resource.model)[1],
"name": resource.name,
"unit": "",
"quantity": 1,
"details": [],
"Parameters": "{}"
}
for bottle in resource.children:
if isinstance(resource, ItemizedCarrier):
site = resource.get_child_identifier(bottle)
else:
site = {"x": bottle.location.x - 1, "y": bottle.location.y - 1}
detail_item = {
"typeId": type_mapping.get(bottle.model)[1],
"name": bottle.name,
"code": bottle.code if hasattr(bottle, "code") else "",
"quantity": sum(qty for _, qty in bottle.tracker.liquids) if hasattr(bottle, "tracker") else 0,
"x": site["x"] + 1,
"y": site["y"] + 1,
"molecular": 1,
"Parameters": json.dumps({"molecular": 1})
}
material["detail"].append(detail)
material["quantity"] = 1.0
material["details"].append(detail_item)
else:
bottle = plr_material[0] if plr_material.capacity > 0 else plr_material
material["quantity"] = sum(qty for _, qty in bottle.tracker.liquids) if hasattr(plr_material, "tracker") else 0
bottle = resource[0] if resource.capacity > 0 else resource
material = {
"typeId": "3a14196b-24f2-ca49-9081-0cab8021bf1a",
"name": resource.get("name", ""),
"unit": "",
"quantity": sum(qty for _, qty in bottle.tracker.liquids) if hasattr(bottle, "tracker") else 0,
"Parameters": "{}"
}
if resource.parent is not None and isinstance(resource.parent, ItemizedCarrier):
site_in_parent = resource.parent.get_child_identifier(resource)
material["locations"] = [
{
"id": warehouse_mapping[resource.parent.name]["site_uuids"][site_in_parent["identifier"]],
"whid": warehouse_mapping[resource.parent.name]["uuid"],
"whName": resource.parent.name,
"x": site_in_parent["z"] + 1,
"y": site_in_parent["y"] + 1,
"z": 1,
"quantity": 0
}
],
print(f"material_data: {material}")
bioyond_materials.append(material)
return bioyond_materials
@@ -717,6 +785,7 @@ def initialize_resource(resource_config: dict, resource_type: Any = None) -> Uni
else:
r = resource_plr
elif resource_class_config["type"] == "unilabos":
raise ValueError(f"No more support for unilabos Resource class {resource_class_config}")
res_instance: RegularContainer = RESOURCE(id=resource_config["name"])
res_instance.ulr_resource = convert_to_ros_msg(
Resource, {k: v for k, v in resource_config.items() if k != "class"}

View File

@@ -32,6 +32,7 @@ class Bottle(Well):
barcode: Optional[str] = "",
category: str = "container",
model: Optional[str] = None,
**kwargs,
):
super().__init__(
name=name,
@@ -73,9 +74,11 @@ class ItemizedCarrier(ResourcePLR):
num_items_x: int = 0,
num_items_y: int = 0,
num_items_z: int = 0,
layout: str = "x-y",
sites: Optional[Dict[Union[int, str], Optional[ResourcePLR]]] = None,
category: Optional[str] = "carrier",
model: Optional[str] = None,
invisible_slots: Optional[str] = None,
):
super().__init__(
name=name,
@@ -87,6 +90,9 @@ class ItemizedCarrier(ResourcePLR):
)
self.num_items = len(sites)
self.num_items_x, self.num_items_y, self.num_items_z = num_items_x, num_items_y, num_items_z
self.invisible_slots = [] if invisible_slots is None else invisible_slots
self.layout = "z-y" if self.num_items_z > 1 and self.num_items_x == 1 else "x-z" if self.num_items_z > 1 and self.num_items_y == 1 else "x-y"
if isinstance(sites, dict):
sites = sites or {}
self.sites: List[Optional[ResourcePLR]] = list(sites.values())
@@ -149,7 +155,7 @@ class ItemizedCarrier(ResourcePLR):
def assign_resource_to_site(self, resource: ResourcePLR, spot: int):
if self.sites[spot] is not None and not isinstance(self.sites[spot], ResourceHolder):
raise ValueError(f"spot {spot} already has a resource, {resource}")
self.assign_child_resource(resource, location=self.child_locations.get(str(spot)), spot=spot)
self.assign_child_resource(resource, location=self.child_locations.get(list(self._ordering.keys())[spot]), spot=spot)
def unassign_child_resource(self, resource: ResourcePLR):
found = False
@@ -160,8 +166,92 @@ class ItemizedCarrier(ResourcePLR):
break
if not found:
raise ValueError(f"Resource {resource} is not assigned to this carrier")
if hasattr(resource, "unassign"):
resource.unassign()
super().unassign_child_resource(resource)
# if hasattr(resource, "unassign"):
# resource.unassign()
def get_child_identifier(self, child: ResourcePLR):
"""Get the identifier information for a given child resource.
Args:
child: The Resource object to find the identifier for
Returns:
dict: A dictionary containing:
- identifier: The string identifier (e.g. "A1", "B2")
- idx: The integer index in the sites list
- x: The x index (column index, 0-based)
- y: The y index (row index, 0-based)
- z: The z index (layer index, 0-based)
Raises:
ValueError: If the child resource is not found in this carrier
"""
# Find the child resource in sites
for idx, resource in enumerate(self.sites):
if resource is child:
# Get the identifier from ordering keys
identifier = list(self._ordering.keys())[idx]
# Parse identifier to get x, y, z indices
x_idx, y_idx, z_idx = self._parse_identifier_to_indices(identifier, idx)
return {
"identifier": identifier,
"idx": idx,
"x": x_idx,
"y": y_idx,
"z": z_idx
}
# If not found, raise an error
raise ValueError(f"Resource {child} is not assigned to this carrier")
def _parse_identifier_to_indices(self, identifier: str, idx: int) -> Tuple[int, int, int]:
"""Parse identifier string to get x, y, z indices.
Args:
identifier: String identifier like "A1", "B2", etc.
idx: Linear index as fallback for calculation
Returns:
Tuple of (x_idx, y_idx, z_idx)
"""
# If we have explicit dimensions, calculate from idx
if self.num_items_x > 0 and self.num_items_y > 0:
# Calculate 3D indices from linear index
z_idx = idx // (self.num_items_x * self.num_items_y) if self.num_items_z > 0 else 0
remaining = idx % (self.num_items_x * self.num_items_y)
y_idx = remaining // self.num_items_x
x_idx = remaining % self.num_items_x
return x_idx, y_idx, z_idx
# Fallback: parse from Excel-style identifier
if isinstance(identifier, str) and len(identifier) >= 2:
# Extract row (letter) and column (number)
row_letters = ""
col_numbers = ""
for char in identifier:
if char.isalpha():
row_letters += char
elif char.isdigit():
col_numbers += char
if row_letters and col_numbers:
# Convert letter(s) to row index (A=0, B=1, etc.)
y_idx = 0
for char in row_letters:
y_idx = y_idx * 26 + (ord(char.upper()) - ord('A'))
# Convert number to column index (1-based to 0-based)
x_idx = int(col_numbers) - 1
z_idx = 0 # Default layer
return x_idx, y_idx, z_idx
# If all else fails, assume linear arrangement
return idx, 0, 0
def __getitem__(
self,
@@ -319,9 +409,10 @@ class ItemizedCarrier(ResourcePLR):
"num_items_x": self.num_items_x,
"num_items_y": self.num_items_y,
"num_items_z": self.num_items_z,
"layout": self.layout,
"sites": [{
"label": str(identifier),
"visible": True if self[identifier] is not None else False,
"visible": False if identifier in self.invisible_slots else True,
"occupied_by": self[identifier].name
if isinstance(self[identifier], ResourcePLR) and not isinstance(self[identifier], ResourceHolder) else
self[identifier] if isinstance(self[identifier], str) else None,
@@ -344,6 +435,8 @@ class BottleCarrier(ItemizedCarrier):
sites: Optional[Dict[Union[int, str], ResourceHolder]] = None,
category: str = "bottle_carrier",
model: Optional[str] = None,
invisible_slots: List[str] = None,
**kwargs,
):
super().__init__(
name=name,
@@ -353,4 +446,5 @@ class BottleCarrier(ItemizedCarrier):
sites=sites,
category=category,
model=model,
invisible_slots=invisible_slots,
)

View File

@@ -5,10 +5,13 @@ from pylabrobot.resources.carrier import ResourceHolder, create_homogeneous_reso
from unilabos.resources.itemized_carrier import ItemizedCarrier, ResourcePLR
def warehouse_factory(
LETTERS = "ABCDEFGHIJKLMNOPQRSTUVWXYZ"
def YB_warehouse_factory(
name: str,
num_items_x: int = 4,
num_items_y: int = 1,
num_items_x: int = 1,
num_items_y: int = 4,
num_items_z: int = 4,
dx: float = 137.0,
dy: float = 96.0,
@@ -33,13 +36,17 @@ def warehouse_factory(
locations.append(Coordinate(x, y, z))
if removed_positions:
locations = [loc for i, loc in enumerate(locations) if i not in removed_positions]
sites = create_homogeneous_resources(
_sites = create_homogeneous_resources(
klass=ResourceHolder,
locations=locations,
resource_size_x=127.0,
resource_size_y=86.0,
name_prefix=name,
)
len_x, len_y = (num_items_x, num_items_y) if num_items_z == 1 else (num_items_y, num_items_z) if num_items_x == 1 else (num_items_x, num_items_z)
keys = [f"{LETTERS[len_y-1-j]}{str(i+1).zfill(2)}" for j in range(len_y) for i in range(len_x)]
sites = {i: site for i, site in zip(keys, _sites.values())}
return WareHouse(
name=name,
@@ -68,6 +75,7 @@ class WareHouse(ItemizedCarrier):
num_items_x: int,
num_items_y: int,
num_items_z: int,
layout: str = "x-y",
sites: Optional[Dict[Union[int, str], Optional[ResourcePLR]]] = None,
category: str = "warehouse",
model: Optional[str] = None,
@@ -83,6 +91,7 @@ class WareHouse(ItemizedCarrier):
num_items_x=num_items_x,
num_items_y=num_items_y,
num_items_z=num_items_z,
layout=layout,
sites=sites,
category=category,
model=model,

View File

@@ -26,6 +26,7 @@ def initialize_device_from_dict(device_id, device_config) -> Optional[ROS2Device
d = None
original_device_config = copy.deepcopy(device_config)
device_class_config = device_config["class"]
uid = device_config["uuid"]
if isinstance(device_class_config, str): # 如果是字符串则直接去lab_registry中查找获取class
if len(device_class_config) == 0:
raise DeviceClassInvalid(f"Device [{device_id}] class cannot be an empty string. {device_config}")
@@ -50,7 +51,7 @@ def initialize_device_from_dict(device_id, device_config) -> Optional[ROS2Device
)
try:
d = DEVICE(
device_id=device_id, driver_is_ros=device_class_config["type"] == "ros2", driver_params=device_config.get("config", {})
device_id=device_id, device_uuid=uid, driver_is_ros=device_class_config["type"] == "ros2", driver_params=device_config.get("config", {})
)
except DeviceInitError as ex:
return d

View File

@@ -10,7 +10,7 @@ from unilabos.ros.nodes.presets.resource_mesh_manager import ResourceMeshManager
from unilabos.ros.nodes.resource_tracker import DeviceNodeResourceTracker, ResourceTreeSet
from unilabos.devices.ros_dev.liquid_handler_joint_publisher import LiquidHandlerJointPublisher
from unilabos_msgs.srv import SerialCommand # type: ignore
from rclpy.executors import MultiThreadedExecutor
from rclpy.executors import MultiThreadedExecutor, SingleThreadedExecutor
from rclpy.node import Node
from rclpy.timer import Timer

View File

@@ -6,7 +6,7 @@ import threading
import time
import traceback
import uuid
from typing import get_type_hints, TypeVar, Generic, Dict, Any, Type, TypedDict, Optional, List, TYPE_CHECKING
from typing import get_type_hints, TypeVar, Generic, Dict, Any, Type, TypedDict, Optional, List, TYPE_CHECKING, Union
from concurrent.futures import ThreadPoolExecutor
import asyncio
@@ -49,7 +49,7 @@ from unilabos_msgs.msg import Resource # type: ignore
from unilabos.ros.nodes.resource_tracker import (
DeviceNodeResourceTracker,
ResourceTreeSet,
ResourceTreeSet, ResourceTreeInstance,
)
from unilabos.ros.x.rclpyx import get_event_loop
from unilabos.ros.utils.driver_creator import WorkstationNodeCreator, PyLabRobotCreator, DeviceClassCreator
@@ -132,6 +132,7 @@ class ROSLoggerAdapter:
def init_wrapper(
self,
device_id: str,
device_uuid: str,
driver_class: type[T],
device_config: Dict[str, Any],
status_types: Dict[str, Any],
@@ -150,6 +151,7 @@ def init_wrapper(
if children is None:
children = []
kwargs["device_id"] = device_id
kwargs["device_uuid"] = device_uuid
kwargs["driver_class"] = driver_class
kwargs["device_config"] = device_config
kwargs["driver_params"] = driver_params
@@ -266,6 +268,7 @@ class BaseROS2DeviceNode(Node, Generic[T]):
self,
driver_instance: T,
device_id: str,
device_uuid: str,
status_types: Dict[str, Any],
action_value_mappings: Dict[str, Any],
hardware_interface: Dict[str, Any],
@@ -278,6 +281,7 @@ class BaseROS2DeviceNode(Node, Generic[T]):
Args:
driver_instance: 设备实例
device_id: 设备标识符
device_uuid: 设备标识符
status_types: 需要发布的状态和传感器信息
action_value_mappings: 设备动作
hardware_interface: 硬件接口配置
@@ -285,7 +289,7 @@ class BaseROS2DeviceNode(Node, Generic[T]):
"""
self.driver_instance = driver_instance
self.device_id = device_id
self.uuid = str(uuid.uuid4())
self.uuid = device_uuid
self.publish_high_frequency = False
self.callback_group = ReentrantCallbackGroup()
self.resource_tracker = resource_tracker
@@ -334,12 +338,12 @@ class BaseROS2DeviceNode(Node, Generic[T]):
# 创建资源管理客户端
self._resource_clients: Dict[str, Client] = {
"resource_add": self.create_client(ResourceAdd, "/resources/add"),
"resource_get": self.create_client(SerialCommand, "/resources/get"),
"resource_delete": self.create_client(ResourceDelete, "/resources/delete"),
"resource_update": self.create_client(ResourceUpdate, "/resources/update"),
"resource_list": self.create_client(ResourceList, "/resources/list"),
"c2s_update_resource_tree": self.create_client(SerialCommand, "/c2s_update_resource_tree"),
"resource_add": self.create_client(ResourceAdd, "/resources/add", callback_group=self.callback_group),
"resource_get": self.create_client(SerialCommand, "/resources/get", callback_group=self.callback_group),
"resource_delete": self.create_client(ResourceDelete, "/resources/delete", callback_group=self.callback_group),
"resource_update": self.create_client(ResourceUpdate, "/resources/update", callback_group=self.callback_group),
"resource_list": self.create_client(ResourceList, "/resources/list", callback_group=self.callback_group),
"c2s_update_resource_tree": self.create_client(SerialCommand, "/c2s_update_resource_tree", callback_group=self.callback_group),
}
def re_register_device(req, res):
@@ -554,6 +558,11 @@ class BaseROS2DeviceNode(Node, Generic[T]):
async def update_resource(self, resources: List["ResourcePLR"]):
r = SerialCommand.Request()
tree_set = ResourceTreeSet.from_plr_resources(resources)
for tree in tree_set.trees:
root_node = tree.root_node
if not root_node.res_content.uuid_parent:
logger.warning(f"更新无父节点物料{root_node},自动以当前设备作为根节点")
root_node.res_content.parent_uuid = self.uuid
r.command = json.dumps({"data": {"data": tree_set.dump()}, "action": "update"})
response: SerialCommand_Response = await self._resource_clients["c2s_update_resource_tree"].call_async(r) # type: ignore
try:
@@ -564,6 +573,52 @@ class BaseROS2DeviceNode(Node, Generic[T]):
self.lab_logger().error(traceback.format_exc())
self.lab_logger().debug(f"资源更新结果: {response}")
def transfer_to_new_resource(self, plr_resource: "ResourcePLR", tree: ResourceTreeInstance, additional_add_params: Dict[str, Any]):
parent_uuid = tree.root_node.res_content.parent_uuid
if parent_uuid:
parent_resource: ResourcePLR = self.resource_tracker.uuid_to_resources.get(parent_uuid)
if parent_resource is None:
self.lab_logger().warning(
f"物料{plr_resource}请求挂载{tree.root_node.res_content.name}的父节点{parent_uuid}不存在"
)
else:
try:
# 特殊兼容所有plr的物料的assign方法和create_resource append_resource后期同步
additional_params = {}
extra = getattr(plr_resource, "unilabos_extra", {})
if len(extra):
self.lab_logger().info(f"发现物料{plr_resource}额外参数: " + str(extra))
if "update_resource_site" in extra:
additional_add_params["site"] = extra["update_resource_site"]
site = additional_add_params.get("site", None)
spec = inspect.signature(parent_resource.assign_child_resource)
if "spot" in spec.parameters:
ordering_dict: Dict[str, Any] = getattr(parent_resource, "_ordering")
if ordering_dict:
site = list(ordering_dict.keys()).index(site)
additional_params["spot"] = site
old_parent = plr_resource.parent
if old_parent is not None:
# plr并不支持同一个deck的加载和卸载
self.lab_logger().warning(
f"物料{plr_resource}请求从{old_parent}卸载"
)
old_parent.unassign_child_resource(plr_resource)
self.lab_logger().warning(
f"物料{plr_resource}请求挂载到{parent_resource},额外参数:{additional_params}"
)
parent_resource.assign_child_resource(
plr_resource, location=None, **additional_params
)
func = getattr(self.driver_instance, "resource_tree_transfer", None)
if callable(func):
# 分别是 物料的原来父节点当前物料的状态物料的新父节点此时物料已经重新assign了
func(old_parent, plr_resource, parent_resource)
except Exception as e:
self.lab_logger().warning(
f"物料{plr_resource}请求挂载{tree.root_node.res_content.name}的父节点{parent_resource}[{parent_uuid}]失败!\n{traceback.format_exc()}"
)
async def s2c_resource_tree(self, req: SerialCommand_Request, res: SerialCommand_Response):
"""
处理资源树更新请求
@@ -573,6 +628,7 @@ class BaseROS2DeviceNode(Node, Generic[T]):
- update: 更新现有资源
- remove: 从资源树中移除资源
"""
from pylabrobot.resources.resource import Resource as ResourcePLR
try:
data = json.loads(req.command)
results = []
@@ -603,28 +659,7 @@ class BaseROS2DeviceNode(Node, Generic[T]):
plr_resources = tree_set.to_plr_resources()
for plr_resource, tree in zip(plr_resources, tree_set.trees):
self.resource_tracker.add_resource(plr_resource)
parent_uuid = tree.root_node.res_content.parent_uuid
if parent_uuid:
parent_resource: ResourcePLR = self.resource_tracker.uuid_to_resources.get(parent_uuid)
if parent_resource is None:
self.lab_logger().warning(
f"物料{plr_resource}请求挂载{tree.root_node.res_content.name}的父节点{parent_uuid}不存在"
)
else:
try:
# 特殊兼容所有plr的物料的assign方法和create_resource append_resource后期同步
additional_params = {}
site = additional_add_params.get("site", None)
spec = inspect.signature(parent_resource.assign_child_resource)
if "spot" in spec.parameters:
additional_params["spot"] = site
parent_resource.assign_child_resource(
plr_resource, location=None, **additional_params
)
except Exception as e:
self.lab_logger().warning(
f"物料{plr_resource}请求挂载{tree.root_node.res_content.name}的父节点{parent_resource}[{parent_uuid}]失败!\n{traceback.format_exc()}"
)
self.transfer_to_new_resource(plr_resource, tree, additional_add_params)
func = getattr(self.driver_instance, "resource_tree_add", None)
if callable(func):
func(plr_resources)
@@ -637,6 +672,17 @@ class BaseROS2DeviceNode(Node, Generic[T]):
original_instance: ResourcePLR = self.resource_tracker.figure_resource(
{"uuid": tree.root_node.res_content.uuid}, try_mode=False
)
original_parent_resource = original_instance.parent
original_parent_resource_uuid = getattr(original_parent_resource, "unilabos_uuid", None)
target_parent_resource_uuid = tree.root_node.res_content.uuid_parent
self.lab_logger().info(
f"物料{original_instance} 原始父节点{original_parent_resource_uuid} 目标父节点{target_parent_resource_uuid} 更新"
)
# todo: 对extra进行update
if getattr(plr_resource, "unilabos_extra", None) is not None:
original_instance.unilabos_extra = getattr(plr_resource, "unilabos_extra")
if original_parent_resource_uuid != target_parent_resource_uuid and original_parent_resource is not None:
self.transfer_to_new_resource(original_instance, tree, additional_add_params)
original_instance.load_all_state(states)
self.lab_logger().info(
f"更新了资源属性 {plr_resource}[{tree.root_node.res_content.uuid}] 及其子节点 {len(original_instance.get_all_children())}"
@@ -648,15 +694,28 @@ class BaseROS2DeviceNode(Node, Generic[T]):
results.append({"success": True, "action": "update"})
elif action == "remove":
# 移除资源
plr_resources: List[ResourcePLR] = [
self.resource_tracker.uuid_to_resources[i] for i in resources_uuid
]
found_resources: List[List[Union[ResourcePLR, dict]]] = self.resource_tracker.figure_resource(
[{"uuid": uid} for uid in resources_uuid], try_mode=True
)
found_plr_resources = []
other_plr_resources = []
for found_resource in found_resources:
for resource in found_resource:
if issubclass(resource.__class__, ResourcePLR):
found_plr_resources.append(resource)
else:
other_plr_resources.append(resource)
func = getattr(self.driver_instance, "resource_tree_remove", None)
if callable(func):
func(plr_resources)
for plr_resource in plr_resources:
plr_resource.parent.unassign_child_resource(plr_resource)
func(found_plr_resources)
for plr_resource in found_plr_resources:
if plr_resource.parent is not None:
plr_resource.parent.unassign_child_resource(plr_resource)
self.resource_tracker.remove_resource(plr_resource)
self.lab_logger().info(f"移除物料 {plr_resource} 及其子节点")
for other_plr_resource in other_plr_resources:
self.resource_tracker.remove_resource(other_plr_resource)
self.lab_logger().info(f"移除物料 {other_plr_resource} 及其子节点")
results.append({"success": True, "action": "remove"})
except Exception as e:
error_msg = f"Error processing {action} operation: {str(e)}"
@@ -856,7 +915,7 @@ class BaseROS2DeviceNode(Node, Generic[T]):
action_type,
action_name,
execute_callback=self._create_execute_callback(action_name, action_value_mapping),
callback_group=ReentrantCallbackGroup(),
callback_group=self.callback_group,
)
self.lab_logger().trace(f"发布动作: {action_name}, 类型: {str_action_type}")
@@ -920,7 +979,7 @@ class BaseROS2DeviceNode(Node, Generic[T]):
queried_resources = []
for resource_data in resource_inputs:
r = SerialCommand.Request()
r.command = json.dumps({"id": resource_data["id"], "with_children": True})
r.command = json.dumps({"id": resource_data["id"], "uuid": resource_data.get("uuid", None), "with_children": True})
# 发送请求并等待响应
response: SerialCommand_Response = await self._resource_clients[
"resource_get"
@@ -936,7 +995,10 @@ class BaseROS2DeviceNode(Node, Generic[T]):
# 通过资源跟踪器获取本地实例
final_resources = queried_resources if is_sequence else queried_resources[0]
action_kwargs[k] = self.resource_tracker.figure_resource(final_resources, try_mode=False)
final_resources = self.resource_tracker.figure_resource({"name": final_resources.name}, try_mode=False) if not is_sequence else [
self.resource_tracker.figure_resource({"name": res.name}, try_mode=False) for res in queried_resources
]
action_kwargs[k] = final_resources
except Exception as e:
self.lab_logger().error(f"{action_name} 物料实例获取失败: {e}\n{traceback.format_exc()}")
@@ -1347,6 +1409,7 @@ class ROS2DeviceNode:
def __init__(
self,
device_id: str,
device_uuid: str,
driver_class: Type[T],
device_config: Dict[str, Any],
driver_params: Dict[str, Any],
@@ -1362,6 +1425,7 @@ class ROS2DeviceNode:
Args:
device_id: 设备标识符
device_uuid: 设备uuid
driver_class: 设备类
device_config: 原始初始化的json
driver_params: driver初始化的参数
@@ -1436,6 +1500,7 @@ class ROS2DeviceNode:
children=children,
driver_instance=self._driver_instance, # type: ignore
device_id=device_id,
device_uuid=device_uuid,
status_types=status_types,
action_value_mappings=action_value_mappings,
hardware_interface=hardware_interface,
@@ -1446,6 +1511,7 @@ class ROS2DeviceNode:
self._ros_node = BaseROS2DeviceNode(
driver_instance=self._driver_instance,
device_id=device_id,
device_uuid=device_uuid,
status_types=status_types,
action_value_mappings=action_value_mappings,
hardware_interface=hardware_interface,
@@ -1470,7 +1536,7 @@ class ROS2DeviceNode:
asyncio.set_event_loop(loop)
loop.run_forever()
ROS2DeviceNode._loop_thread = threading.Thread(target=run_event_loop, daemon=True, name="ROS2DeviceNode")
ROS2DeviceNode._loop_thread = threading.Thread(target=run_event_loop, daemon=True, name="ROS2DeviceNodeLoop")
ROS2DeviceNode._loop_thread.start()
logger.info(f"循环线程已启动")

View File

@@ -18,7 +18,7 @@ from unilabos_msgs.srv import (
ResourceDelete,
ResourceUpdate,
ResourceList,
SerialCommand,
SerialCommand, ResourceGet,
) # type: ignore
from unilabos_msgs.srv._serial_command import SerialCommand_Request, SerialCommand_Response
from unique_identifier_msgs.msg import UUID
@@ -41,6 +41,7 @@ from unilabos.ros.nodes.resource_tracker import (
ResourceTreeSet,
ResourceTreeInstance,
)
from unilabos.utils import logger
from unilabos.utils.exception import DeviceClassInvalid
from unilabos.utils.type_check import serialize_result_info
from unilabos.registry.placeholder_type import ResourceSlot, DeviceSlot
@@ -99,17 +100,6 @@ class HostNode(BaseROS2DeviceNode):
"""
if self._instance is not None:
self._instance.lab_logger().critical("[Host Node] HostNode instance already exists.")
# 初始化Node基类传递空参数覆盖列表
BaseROS2DeviceNode.__init__(
self,
driver_instance=self,
device_id=device_id,
status_types={},
action_value_mappings=lab_registry.device_type_registry["host_node"]["class"]["action_value_mappings"],
hardware_interface={},
print_publish=False,
resource_tracker=self._resource_tracker, # host node并不是通过initialize 包一层传进来的
)
# 设置单例实例
self.__class__._instance = self
@@ -127,6 +117,91 @@ class HostNode(BaseROS2DeviceNode):
bridges = []
self.bridges = bridges
# 创建 host_node 作为一个单独的 ResourceTree
host_node_dict = {
"id": "host_node",
"uuid": str(uuid.uuid4()),
"parent_uuid": "",
"name": "host_node",
"type": "device",
"class": "host_node",
"config": {},
"data": {},
"children": [],
"description": "",
"schema": {},
"model": {},
"icon": "",
}
# 创建 host_node 的 ResourceTree
host_node_instance = ResourceDictInstance.get_resource_instance_from_dict(host_node_dict)
host_node_tree = ResourceTreeInstance(host_node_instance)
resources_config.trees.insert(0, host_node_tree)
try:
for bridge in self.bridges:
if hasattr(bridge, "resource_tree_add") and resources_config:
from unilabos.app.web.client import HTTPClient
client: HTTPClient = bridge
resource_start_time = time.time()
# 传递 ResourceTreeSet 对象,在 client 中转换为字典并获取 UUID 映射
uuid_mapping = client.resource_tree_add(resources_config, "", True)
device_uuid = resources_config.root_nodes[0].res_content.uuid
resource_end_time = time.time()
logger.info(
f"[Host Node-Resource] 物料上传 {round(resource_end_time - resource_start_time, 5) * 1000} ms"
)
for edge in self.resources_edge_config:
edge["source_uuid"] = uuid_mapping.get(edge["source_uuid"], edge["source_uuid"])
edge["target_uuid"] = uuid_mapping.get(edge["target_uuid"], edge["target_uuid"])
resource_add_res = client.resource_edge_add(self.resources_edge_config)
resource_edge_end_time = time.time()
logger.info(
f"[Host Node-Resource] 物料关系上传 {round(resource_edge_end_time - resource_end_time, 5) * 1000} ms"
)
# resources_config 通过各个设备的 resource_tracker 进行uuid更新利用uuid_mapping
# resources_config 的 root node 是
# # 创建反向映射new_uuid -> old_uuid
# reverse_uuid_mapping = {new_uuid: old_uuid for old_uuid, new_uuid in uuid_mapping.items()}
# for tree in resources_config.trees:
# node = tree.root_node
# if node.res_content.type == "device":
# if node.res_content.id == "host_node":
# continue
# # slave节点走c2s更新接口拿到add自行update uuid
# device_tracker = self.devices_instances[node.res_content.id].resource_tracker
# old_uuid = reverse_uuid_mapping.get(node.res_content.uuid)
# if old_uuid:
# # 找到旧UUID使用UUID查找
# resource_instance = device_tracker.uuid_to_resources.get(old_uuid)
# else:
# # 未找到旧UUID使用name查找
# resource_instance = device_tracker.figure_resource(
# {"name": node.res_content.name}
# )
# device_tracker.loop_update_uuid(resource_instance, uuid_mapping)
# else:
# try:
# for plr_resource in ResourceTreeSet([tree]).to_plr_resources():
# self.resource_tracker.add_resource(plr_resource)
# except Exception as ex:
# self.lab_logger().warning("[Host Node-Resource] 根节点物料序列化失败!")
except Exception as ex:
logger.error(f"[Host Node-Resource] 添加物料出错!\n{traceback.format_exc()}")
# 初始化Node基类传递空参数覆盖列表
BaseROS2DeviceNode.__init__(
self,
driver_instance=self,
device_id=device_id,
device_uuid=host_node_dict["uuid"],
status_types={},
action_value_mappings=lab_registry.device_type_registry["host_node"]["class"]["action_value_mappings"],
hardware_interface={},
print_publish=False,
resource_tracker=self._resource_tracker, # host node并不是通过initialize 包一层传进来的
)
# 创建设备、动作客户端和目标存储
self.devices_names: Dict[str, str] = {device_id: self.namespace} # 存储设备名称和命名空间的映射
self.devices_instances: Dict[str, ROS2DeviceNode] = {} # 存储设备实例
@@ -207,84 +282,10 @@ class HostNode(BaseROS2DeviceNode):
].items():
controller_config["update_rate"] = update_rate
self.initialize_controller(controller_id, controller_config)
# 创建 host_node 作为一个单独的 ResourceTree
host_node_dict = {
"id": "host_node",
"uuid": str(uuid.uuid4()),
"parent_uuid": "",
"name": "host_node",
"type": "device",
"class": "host_node",
"config": {},
"data": {},
"children": [],
"description": "",
"schema": {},
"model": {},
"icon": "",
}
# 创建 host_node 的 ResourceTree
host_node_instance = ResourceDictInstance.get_resource_instance_from_dict(host_node_dict)
host_node_tree = ResourceTreeInstance(host_node_instance)
resources_config.trees.insert(0, host_node_tree)
try:
for bridge in self.bridges:
if hasattr(bridge, "resource_tree_add") and resources_config:
from unilabos.app.web.client import HTTPClient
client: HTTPClient = bridge
resource_start_time = time.time()
# 传递 ResourceTreeSet 对象,在 client 中转换为字典并获取 UUID 映射
uuid_mapping = client.resource_tree_add(resources_config, "", True)
resource_end_time = time.time()
self.lab_logger().info(
f"[Host Node-Resource] 物料上传 {round(resource_end_time - resource_start_time, 5) * 1000} ms"
)
for edge in self.resources_edge_config:
edge["source_uuid"] = uuid_mapping.get(edge["source_uuid"], edge["source_uuid"])
edge["target_uuid"] = uuid_mapping.get(edge["target_uuid"], edge["target_uuid"])
resource_add_res = client.resource_edge_add(self.resources_edge_config)
resource_edge_end_time = time.time()
self.lab_logger().info(
f"[Host Node-Resource] 物料关系上传 {round(resource_edge_end_time - resource_end_time, 5) * 1000} ms"
)
# resources_config 通过各个设备的 resource_tracker 进行uuid更新利用uuid_mapping
# resources_config 的 root node 是
# 创建反向映射new_uuid -> old_uuid
reverse_uuid_mapping = {new_uuid: old_uuid for old_uuid, new_uuid in uuid_mapping.items()}
for tree in resources_config.trees:
node = tree.root_node
if node.res_content.type == "device":
for sub_node in node.children:
# 只有二级子设备
if sub_node.res_content.type != "device":
# slave节点走c2s更新接口拿到add自行update uuid
device_tracker = self.devices_instances[node.res_content.id].resource_tracker
# sub_node.res_content.uuid 已经是新UUID需要用旧UUID去查找
old_uuid = reverse_uuid_mapping.get(sub_node.res_content.uuid)
if old_uuid:
# 找到旧UUID使用UUID查找
resource_instance = device_tracker.figure_resource({"uuid": old_uuid})
else:
# 未找到旧UUID使用name查找
resource_instance = device_tracker.figure_resource(
{"name": sub_node.res_content.name}
)
device_tracker.loop_update_uuid(resource_instance, uuid_mapping)
else:
try:
for plr_resource in ResourceTreeSet([tree]).to_plr_resources():
self.resource_tracker.add_resource(plr_resource)
except Exception as ex:
self.lab_logger().warning("[Host Node-Resource] 根节点物料序列化失败!")
except Exception as ex:
self.lab_logger().error("[Host Node-Resource] 添加物料出错!")
self.lab_logger().error(traceback.format_exc())
# 创建定时器,定期发现设备
self._discovery_timer = self.create_timer(
discovery_interval, self._discovery_devices_callback, callback_group=ReentrantCallbackGroup()
discovery_interval, self._discovery_devices_callback, callback_group=self.callback_group
)
# 添加ping-pong相关属性
@@ -493,7 +494,7 @@ class HostNode(BaseROS2DeviceNode):
if len(init_new_res) > 1: # 一个物料,多个子节点
init_new_res = [init_new_res]
resources: List[Resource] | List[List[Resource]] = init_new_res # initialize_resource已经返回list[dict]
device_ids = [device_id]
device_ids = [device_id.split("/")[-1]]
bind_parent_id = [res_creation_input["parent"]]
bind_location = [bind_locations]
other_calling_param = [
@@ -617,7 +618,7 @@ class HostNode(BaseROS2DeviceNode):
topic,
lambda msg, d=device_id, p=property_name: self.property_callback(msg, d, p),
1,
callback_group=ReentrantCallbackGroup(),
callback_group=self.callback_group,
)
# 标记为已订阅
self._subscribed_topics.add(topic)
@@ -828,41 +829,41 @@ class HostNode(BaseROS2DeviceNode):
def _init_host_service(self):
self._resource_services: Dict[str, Service] = {
"resource_add": self.create_service(
ResourceAdd, "/resources/add", self._resource_add_callback, callback_group=ReentrantCallbackGroup()
ResourceAdd, "/resources/add", self._resource_add_callback, callback_group=self.callback_group
),
"resource_get": self.create_service(
SerialCommand, "/resources/get", self._resource_get_callback, callback_group=ReentrantCallbackGroup()
SerialCommand, "/resources/get", self._resource_get_callback, callback_group=self.callback_group
),
"resource_delete": self.create_service(
ResourceDelete,
"/resources/delete",
self._resource_delete_callback,
callback_group=ReentrantCallbackGroup(),
callback_group=self.callback_group,
),
"resource_update": self.create_service(
ResourceUpdate,
"/resources/update",
self._resource_update_callback,
callback_group=ReentrantCallbackGroup(),
callback_group=self.callback_group,
),
"resource_list": self.create_service(
ResourceList, "/resources/list", self._resource_list_callback, callback_group=ReentrantCallbackGroup()
ResourceList, "/resources/list", self._resource_list_callback, callback_group=self.callback_group
),
"node_info_update": self.create_service(
SerialCommand,
"/node_info_update",
self._node_info_update_callback,
callback_group=ReentrantCallbackGroup(),
callback_group=self.callback_group,
),
"c2s_update_resource_tree": self.create_service(
SerialCommand,
"/c2s_update_resource_tree",
self._resource_tree_update_callback,
callback_group=ReentrantCallbackGroup(),
callback_group=self.callback_group,
),
}
def _resource_tree_action_add_callback(self, data: dict, response: SerialCommand_Response): # OK
async def _resource_tree_action_add_callback(self, data: dict, response: SerialCommand_Response): # OK
resource_tree_set = ResourceTreeSet.load(data["data"])
mount_uuid = data["mount_uuid"]
first_add = data["first_add"]
@@ -903,7 +904,7 @@ class HostNode(BaseROS2DeviceNode):
response.response = json.dumps(uuid_mapping) if success else "FAILED"
self.lab_logger().info(f"[Host Node-Resource] Resource tree add completed, success: {success}")
def _resource_tree_action_get_callback(self, data: dict, response: SerialCommand_Response): # OK
async def _resource_tree_action_get_callback(self, data: dict, response: SerialCommand_Response): # OK
uuid_list: List[str] = data["data"]
with_children: bool = data["with_children"]
from unilabos.app.web.client import http_client
@@ -911,7 +912,7 @@ class HostNode(BaseROS2DeviceNode):
resource_response = http_client.resource_tree_get(uuid_list, with_children)
response.response = json.dumps(resource_response)
def _resource_tree_action_remove_callback(self, data: dict, response: SerialCommand_Response):
async def _resource_tree_action_remove_callback(self, data: dict, response: SerialCommand_Response):
"""
子节点通知Host物料树删除
"""
@@ -919,7 +920,7 @@ class HostNode(BaseROS2DeviceNode):
response.response = "OK"
self.lab_logger().info(f"[Host Node-Resource] Resource tree remove completed")
def _resource_tree_action_update_callback(self, data: dict, response: SerialCommand_Response):
async def _resource_tree_action_update_callback(self, data: dict, response: SerialCommand_Response):
"""
子节点通知Host物料树更新
"""
@@ -932,20 +933,29 @@ class HostNode(BaseROS2DeviceNode):
from unilabos.app.web.client import http_client
resource_start_time = time.time()
uuid_mapping = http_client.resource_tree_update(resource_tree_set, "", False)
success = bool(uuid_mapping)
resource_end_time = time.time()
self.lab_logger().info(
f"[Host Node-Resource] 物料更新上传 {round(resource_end_time - resource_start_time, 5) * 1000} ms"
)
if uuid_mapping:
self.lab_logger().info(f"[Host Node-Resource] UUID映射: {len(uuid_mapping)} 个节点")
# 还需要加入到资源图中,暂不实现,考虑资源图新的获取方式
response.response = json.dumps(uuid_mapping)
self.lab_logger().info(f"[Host Node-Resource] Resource tree add completed, success: {success}")
uuid_to_trees: Dict[str, List[ResourceTreeInstance]] = collections.defaultdict(list)
for tree in resource_tree_set.trees:
uuid_to_trees[tree.root_node.res_content.parent_uuid].append(tree)
def _resource_tree_update_callback(self, request: SerialCommand_Request, response: SerialCommand_Response):
for uid, trees in uuid_to_trees.items():
new_tree_set = ResourceTreeSet(trees)
resource_start_time = time.time()
self.lab_logger().info(
f"[Host Node-Resource] 物料 {[root_node.res_content.id for root_node in new_tree_set.root_nodes]} {uid} 挂载 {trees[0].root_node.res_content.parent_uuid} 请求更新上传"
)
uuid_mapping = http_client.resource_tree_add(new_tree_set, uid, False)
success = bool(uuid_mapping)
resource_end_time = time.time()
self.lab_logger().info(
f"[Host Node-Resource] 物料更新上传 {round(resource_end_time - resource_start_time, 5) * 1000} ms"
)
if uuid_mapping:
self.lab_logger().info(f"[Host Node-Resource] UUID映射: {len(uuid_mapping)} 个节点")
# 还需要加入到资源图中,暂不实现,考虑资源图新的获取方式
response.response = json.dumps(uuid_mapping)
self.lab_logger().info(f"[Host Node-Resource] Resource tree add completed, success: {success}")
async def _resource_tree_update_callback(self, request: SerialCommand_Request, response: SerialCommand_Response):
"""
子节点通知Host物料树更新
@@ -958,13 +968,13 @@ class HostNode(BaseROS2DeviceNode):
action = data["action"]
data = data["data"]
if action == "add":
self._resource_tree_action_add_callback(data, response)
await self._resource_tree_action_add_callback(data, response)
elif action == "get":
self._resource_tree_action_get_callback(data, response)
await self._resource_tree_action_get_callback(data, response)
elif action == "update":
self._resource_tree_action_update_callback(data, response)
await self._resource_tree_action_update_callback(data, response)
elif action == "remove":
self._resource_tree_action_remove_callback(data, response)
await self._resource_tree_action_remove_callback(data, response)
else:
self.lab_logger().error(f"[Host Node-Resource] Invalid action: {action}")
response.response = "ERROR"
@@ -1060,7 +1070,12 @@ class HostNode(BaseROS2DeviceNode):
"""
try:
data = json.loads(request.command)
http_req = self.bridges[-1].resource_get(data["id"], data["with_children"])
if "uuid" in data and data["uuid"] is not None:
http_req = self.bridges[-1].resource_tree_get([data["uuid"]], data["with_children"])
elif "id" in data and data["id"].startswith("/"):
http_req = self.bridges[-1].resource_get(data["id"], data["with_children"])
else:
raise ValueError("没有使用正确的物料 id 或 uuid")
response.response = json.dumps(http_req["data"])
return response
except Exception as e:

View File

@@ -6,13 +6,14 @@ from typing import List, Dict, Any, Optional, TYPE_CHECKING
import rclpy
from rosidl_runtime_py import message_to_ordereddict
from unilabos_msgs.msg import Resource
from unilabos_msgs.srv import ResourceUpdate
from unilabos.messages import * # type: ignore # protocol names
from rclpy.action import ActionServer, ActionClient
from rclpy.action.server import ServerGoalHandle
from rclpy.callback_groups import ReentrantCallbackGroup
from unilabos_msgs.msg import Resource # type: ignore
from unilabos_msgs.srv import ResourceGet, ResourceUpdate # type: ignore
from unilabos_msgs.srv._serial_command import SerialCommand_Request, SerialCommand_Response
from unilabos.compile import action_protocol_generators
from unilabos.resources.graphio import list_to_nested_dict, nested_dict_to_list
@@ -20,11 +21,11 @@ from unilabos.ros.initialize_device import initialize_device_from_dict
from unilabos.ros.msgs.message_converter import (
get_action_type,
convert_to_ros_msg,
convert_from_ros_msg,
convert_from_ros_msg_with_mapping,
)
from unilabos.ros.nodes.base_device_node import BaseROS2DeviceNode, DeviceNodeResourceTracker, ROS2DeviceNode
from unilabos.utils.type_check import serialize_result_info, get_result_info_str
from unilabos.ros.nodes.resource_tracker import ResourceTreeSet
from unilabos.utils.type_check import get_result_info_str
if TYPE_CHECKING:
from unilabos.devices.workstation.workstation_base import WorkstationBase
@@ -50,6 +51,7 @@ class ROS2WorkstationNode(BaseROS2DeviceNode):
*,
driver_instance: "WorkstationBase",
device_id: str,
device_uuid: str,
status_types: Dict[str, Any],
action_value_mappings: Dict[str, Any],
hardware_interface: Dict[str, Any],
@@ -64,6 +66,7 @@ class ROS2WorkstationNode(BaseROS2DeviceNode):
super().__init__(
driver_instance=driver_instance,
device_id=device_id,
device_uuid=device_uuid,
status_types=status_types,
action_value_mappings={**action_value_mappings, **self.protocol_action_mappings},
hardware_interface=hardware_interface,
@@ -191,7 +194,7 @@ class ROS2WorkstationNode(BaseROS2DeviceNode):
action_type,
action_name,
execute_callback=self._create_protocol_execute_callback(action_name, protocol_steps_generator),
callback_group=ReentrantCallbackGroup(),
callback_group=self.callback_group,
)
self.lab_logger().trace(f"发布动作: {action_name}, 类型: {str_action_type}")
return
@@ -222,16 +225,29 @@ class ROS2WorkstationNode(BaseROS2DeviceNode):
# 向Host查询物料当前状态
for k, v in goal.get_fields_and_field_types().items():
if v in ["unilabos_msgs/Resource", "sequence<unilabos_msgs/Resource>"]:
r = ResourceGet.Request()
resource_id = (
protocol_kwargs[k]["id"] if v == "unilabos_msgs/Resource" else protocol_kwargs[k][0]["id"]
)
r.id = resource_id
r.with_children = True
response = await self._resource_clients["resource_get"].call_async(r)
protocol_kwargs[k] = list_to_nested_dict(
[convert_from_ros_msg(rs) for rs in response.resources]
)
self.lab_logger().info(f"{protocol_name} 查询资源状态: Key: {k} Type: {v}")
try:
# 统一处理单个或多个资源
resource_id = (
protocol_kwargs[k]["id"] if v == "unilabos_msgs/Resource" else protocol_kwargs[k][0]["id"]
)
resource_uuid = protocol_kwargs[k].get("uuid", None)
r = SerialCommand_Request()
r.command = json.dumps({"id": resource_id, "uuid": resource_uuid, "with_children": True})
# 发送请求并等待响应
response: SerialCommand_Response = await self._resource_clients[
"resource_get"
].call_async(
r
) # type: ignore
raw_data = json.loads(response.response)
tree_set = ResourceTreeSet.from_raw_list(raw_data)
target = tree_set.dump()
protocol_kwargs[k] = target[0][0] if v == "unilabos_msgs/Resource" else target
except Exception as ex:
self.lab_logger().error(f"查询资源失败: {k}, 错误: {ex}\n{traceback.format_exc()}")
raise
self.lab_logger().info(f"🔍 最终的 vessel: {protocol_kwargs.get('vessel', 'NOT_FOUND')}")

View File

@@ -1,3 +1,4 @@
import traceback
import uuid
from pydantic import BaseModel, field_serializer, field_validator
from pydantic import Field
@@ -31,7 +32,7 @@ class ResourceDictPositionObject(BaseModel):
class ResourceDictPosition(BaseModel):
size: ResourceDictPositionSize = Field(description="Resource size", default_factory=ResourceDictPositionSize)
scale: ResourceDictPositionScale = Field(description="Resource scale", default_factory=ResourceDictPositionScale)
layout: Literal["2d"] = Field(description="Resource layout", default="2d")
layout: Literal["2d", "x-y", "z-y", "x-z"] = Field(description="Resource layout", default="x-y")
position: ResourceDictPositionObject = Field(
description="Resource position", default_factory=ResourceDictPositionObject
)
@@ -41,6 +42,9 @@ class ResourceDictPosition(BaseModel):
rotation: ResourceDictPositionObject = Field(
description="Resource rotation", default_factory=ResourceDictPositionObject
)
cross_section_type: Literal["rectangle", "circle", "rounded_rectangle"] = Field(
description="Cross section type", default="rectangle"
)
# 统一的资源字典模型parent 自动序列化为 parent_uuidchildren 不序列化
@@ -49,7 +53,9 @@ class ResourceDict(BaseModel):
uuid: str = Field(description="Resource UUID")
name: str = Field(description="Resource name")
description: str = Field(description="Resource description", default="")
schema: Dict[str, Any] = Field(description="Resource schema", default_factory=dict)
resource_schema: Dict[str, Any] = Field(
description="Resource schema", default_factory=dict, serialization_alias="schema", validation_alias="schema"
)
model: Dict[str, Any] = Field(description="Resource model", default_factory=dict)
icon: str = Field(description="Resource icon", default="")
parent_uuid: Optional["str"] = Field(description="Parent resource uuid", default=None) # 先设定parent_uuid
@@ -57,8 +63,10 @@ class ResourceDict(BaseModel):
type: Literal["device"] | str = Field(description="Resource type")
klass: str = Field(alias="class", description="Resource class name")
position: ResourceDictPosition = Field(description="Resource position", default_factory=ResourceDictPosition)
pose: ResourceDictPosition = Field(description="Resource position", default_factory=ResourceDictPosition)
config: Dict[str, Any] = Field(description="Resource configuration")
data: Dict[str, Any] = Field(description="Resource data")
extra: Dict[str, Any] = Field(description="Extra data")
@field_serializer("parent_uuid")
def _serialize_parent(self, parent_uuid: Optional["ResourceDict"]):
@@ -135,12 +143,16 @@ class ResourceDictInstance(object):
content["config"] = {}
if not content.get("data"):
content["data"] = {}
if not content.get("extra"): # MagicCode
content["extra"] = {}
if "pose" not in content:
content["pose"] = content.get("position", {})
return ResourceDictInstance(ResourceDict.model_validate(content))
def get_nested_dict(self) -> Dict[str, Any]:
"""获取资源实例的嵌套字典表示"""
res_dict = self.res_content.model_dump(by_alias=True)
res_dict["children"] = {child.res_content.name: child.get_nested_dict() for child in self.children}
res_dict["children"] = {child.res_content.id: child.get_nested_dict() for child in self.children}
res_dict["parent"] = self.res_content.parent_instance_name
res_dict["position"] = self.res_content.position.position.model_dump()
return res_dict
@@ -213,7 +225,7 @@ class ResourceTreeInstance(object):
if node.res_content.uuid:
known_uuids.add(node.res_content.uuid)
else:
print(f"警告: 资源 {node.res_content.id} 没有uuid")
logger.warning(f"警告: 资源 {node.res_content.id} 没有uuid")
# 验证并递归处理子节点
for child in node.children:
@@ -289,8 +301,6 @@ class ResourceTreeSet(object):
elif isinstance(resource_list[0], ResourceTreeInstance):
# 已经是ResourceTree列表
self.trees = cast(List[ResourceTreeInstance], resource_list)
elif isinstance(resource_list[0], list):
pass
else:
raise TypeError(
f"不支持的类型: {type(resource_list[0])}"
@@ -307,27 +317,52 @@ class ResourceTreeSet(object):
replace_info = {
"plate": "plate",
"well": "well",
"tip_spot": "container",
"trash": "container",
"deck": "deck",
"tip_rack": "container",
"tip_rack": "tip_rack",
"tip_spot": "tip_spot",
"tube": "tube",
"bottle_carrier": "bottle_carrier",
}
if source in replace_info:
return replace_info[source]
else:
print("转换pylabrobot的时候出现未知类型", source)
return "container"
return source
def build_uuid_mapping(res: "PLRResource", uuid_list: list):
"""递归构建uuid映射字典"""
uuid_list.append(getattr(res, "unilabos_uuid", ""))
def build_uuid_mapping(res: "PLRResource", uuid_list: list, parent_uuid: Optional[str] = None):
"""递归构建uuid和extra映射字典返回(current_uuid, parent_uuid, extra)元组列表"""
uid = getattr(res, "unilabos_uuid", "")
if not uid:
uid = str(uuid.uuid4())
res.unilabos_uuid = uid
logger.warning(f"{res}没有uuid请设置后再传入默认填充{uid}\n{traceback.format_exc()}")
# 获取unilabos_extra默认为空字典
extra = getattr(res, "unilabos_extra", {})
uuid_list.append((uid, parent_uuid, extra))
for child in res.children:
build_uuid_mapping(child, uuid_list)
build_uuid_mapping(child, uuid_list, uid)
def resource_plr_inner(
d: dict, parent_resource: Optional[ResourceDict], states: dict, uuids: list
) -> ResourceDictInstance:
current_uuid = uuids.pop(0)
current_uuid, parent_uuid, extra = uuids.pop(0)
raw_pos = (
{"x": d["location"]["x"], "y": d["location"]["y"], "z": d["location"]["z"]}
if d["location"]
else {"x": 0, "y": 0, "z": 0}
)
pos = {
"size": {"width": d["size_x"], "height": d["size_y"], "depth": d["size_z"]},
"scale": {"x": 1.0, "y": 1.0, "z": 1.0},
"layout": d.get("layout", "x-y"),
"position": raw_pos,
"position3d": raw_pos,
"rotation": d["rotation"],
"cross_section_type": d.get("cross_section_type", "rectangle"),
}
# 先构建当前节点的字典不包含children
r_dict = {
@@ -335,15 +370,30 @@ class ResourceTreeSet(object):
"uuid": current_uuid,
"name": d["name"],
"parent": parent_resource, # 直接传入 ResourceDict 对象
"parent_uuid": parent_uuid, # 使用 parent_uuid 而不是 parent 对象
"type": replace_plr_type(d.get("category", "")),
"class": d.get("class", ""),
"position": (
{"x": d["location"]["x"], "y": d["location"]["y"], "z": d["location"]["z"]}
if d["location"]
else {"x": 0, "y": 0, "z": 0}
),
"config": {k: v for k, v in d.items() if k not in ["name", "children", "parent_name", "location"]},
"position": pos,
"pose": pos,
"config": {
k: v
for k, v in d.items()
if k
not in [
"name",
"children",
"parent_name",
"location",
"rotation",
"size_x",
"size_y",
"size_z",
"cross_section_type",
"bottom_type",
]
},
"data": states[d["name"]],
"extra": extra,
}
# 先转换为 ResourceDictInstance获取其中的 ResourceDict
@@ -361,7 +411,7 @@ class ResourceTreeSet(object):
for resource in resources:
# 构建uuid列表
uuid_list = []
build_uuid_mapping(resource, uuid_list)
build_uuid_mapping(resource, uuid_list, getattr(resource.parent, "unilabos_uuid", None))
serialized_data = resource.serialize()
all_states = resource.serialize_all_state()
@@ -384,25 +434,27 @@ class ResourceTreeSet(object):
import inspect
# 类型映射
TYPE_MAP = {"plate": "plate", "well": "well", "container": "tip_spot", "deck": "deck", "tip_rack": "tip_rack"}
TYPE_MAP = {"plate": "Plate", "well": "Well", "deck": "Deck", "container": "RegularContainer"}
def collect_node_data(node: ResourceDictInstance, name_to_uuid: dict, all_states: dict):
"""一次遍历收集 name_to_uuid all_states"""
def collect_node_data(node: ResourceDictInstance, name_to_uuid: dict, all_states: dict, name_to_extra: dict):
"""一次遍历收集 name_to_uuid, all_states 和 name_to_extra"""
name_to_uuid[node.res_content.name] = node.res_content.uuid
all_states[node.res_content.name] = node.res_content.data
name_to_extra[node.res_content.name] = node.res_content.extra
for child in node.children:
collect_node_data(child, name_to_uuid, all_states)
collect_node_data(child, name_to_uuid, all_states, name_to_extra)
def node_to_plr_dict(node: ResourceDictInstance, has_model: bool):
"""转换节点为 PLR 字典格式"""
res = node.res_content
plr_type = TYPE_MAP.get(res.type, "tip_spot")
plr_type = TYPE_MAP.get(res.type, res.type)
if res.type not in TYPE_MAP:
logger.warning(f"未知类型 {res.type},使用默认类型 tip_spot")
logger.warning(f"未知类型 {res.type}")
d = {
**res.config,
"name": res.name,
"type": plr_type,
"type": res.config.get("type", plr_type),
"size_x": res.config.get("size_x", 0),
"size_y": res.config.get("size_y", 0),
"size_z": res.config.get("size_z", 0),
@@ -413,36 +465,38 @@ class ResourceTreeSet(object):
"type": "Coordinate",
},
"rotation": {"x": 0, "y": 0, "z": 0, "type": "Rotation"},
"category": plr_type,
"category": res.config.get("category", plr_type),
"children": [node_to_plr_dict(child, has_model) for child in node.children],
"parent_name": res.parent_instance_name,
**res.config,
}
if has_model:
d["model"] = res.config.get("model", None)
return d
plr_resources = []
trees = []
tracker = DeviceNodeResourceTracker()
for tree in self.trees:
name_to_uuid: Dict[str, str] = {}
all_states: Dict[str, Any] = {}
collect_node_data(tree.root_node, name_to_uuid, all_states)
name_to_extra: Dict[str, dict] = {}
collect_node_data(tree.root_node, name_to_uuid, all_states, name_to_extra)
has_model = tree.root_node.res_content.type != "deck"
plr_dict = node_to_plr_dict(tree.root_node, has_model)
try:
sub_cls = find_subclass(plr_dict["type"], PLRResource)
if sub_cls is None:
raise ValueError(f"无法找到类型 {plr_dict['type']} 对应的 PLR 资源类")
raise ValueError(
f"无法找到类型 {plr_dict['type']} 对应的 PLR 资源类。原始信息:{tree.root_node.res_content}"
)
spec = inspect.signature(sub_cls)
if "category" not in spec.parameters:
plr_dict.pop("category", None)
plr_resource = sub_cls.deserialize(plr_dict, allow_marshal=True)
plr_resource.load_all_state(all_states)
# 使用 DeviceNodeResourceTracker 设置 UUID
# 使用 DeviceNodeResourceTracker 设置 UUID 和 Extra
tracker.loop_set_uuid(plr_resource, name_to_uuid)
tracker.loop_set_extra(plr_resource, name_to_extra)
plr_resources.append(plr_resource)
except Exception as e:
@@ -715,16 +769,9 @@ class ResourceTreeSet(object):
Returns:
ResourceTreeSet: 反序列化后的资源树集合
"""
# 将每个字典转换为 ResourceInstanceDict
# FIXME: 需要重新确定parent关系
nested_lists = []
for tree_data in data:
flatten_instances = [
ResourceDictInstance.get_resource_instance_from_dict(node_dict) for node_dict in tree_data
]
nested_lists.append(flatten_instances)
# 使用现有的构造函数创建 ResourceTreeSet
nested_lists.extend(ResourceTreeSet.from_raw_list(tree_data).trees)
return cls(nested_lists)
@@ -777,7 +824,8 @@ class DeviceNodeResourceTracker(object):
else:
return getattr(resource, uuid_attr, None)
def _set_resource_uuid(self, resource, new_uuid: str):
@classmethod
def set_resource_uuid(cls, resource, new_uuid: str):
"""
设置资源的 uuid统一处理 dict 和 instance 两种类型
@@ -790,6 +838,20 @@ class DeviceNodeResourceTracker(object):
else:
setattr(resource, "unilabos_uuid", new_uuid)
@staticmethod
def set_resource_extra(resource, extra: dict):
"""
设置资源的 extra统一处理 dict 和 instance 两种类型
Args:
resource: 资源对象dict或实例
extra: extra字典值
"""
if isinstance(resource, dict):
resource["extra"] = extra
else:
setattr(resource, "unilabos_extra", extra)
def _traverse_and_process(self, resource, process_func) -> int:
"""
递归遍历资源树,对每个节点执行处理函数
@@ -830,7 +892,7 @@ class DeviceNodeResourceTracker(object):
resource_name = self._get_resource_attr(res, "name")
if resource_name and resource_name in name_to_uuid_map:
new_uuid = name_to_uuid_map[resource_name]
self._set_resource_uuid(res, new_uuid)
self.set_resource_uuid(res, new_uuid)
self.uuid_to_resources[new_uuid] = res
logger.debug(f"设置资源UUID: {resource_name} -> {new_uuid}")
return 1
@@ -838,11 +900,34 @@ class DeviceNodeResourceTracker(object):
return self._traverse_and_process(resource, process)
def loop_set_extra(self, resource, name_to_extra_map: Dict[str, dict]) -> int:
"""
递归遍历资源树,根据 name 设置所有节点的 extra
Args:
resource: 资源对象可以是dict或实例
name_to_extra_map: name到extra的映射字典{name: extra}
Returns:
更新的资源数量
"""
def process(res):
resource_name = self._get_resource_attr(res, "name")
if resource_name and resource_name in name_to_extra_map:
extra = name_to_extra_map[resource_name]
self.set_resource_extra(res, extra)
logger.debug(f"设置资源Extra: {resource_name} -> {extra}")
return 1
return 0
return self._traverse_and_process(resource, process)
def loop_update_uuid(self, resource, uuid_map: Dict[str, str]) -> int:
"""
递归遍历资源树更新所有节点的uuid
Args:
Args:0
resource: 资源对象可以是dict或实例
uuid_map: uuid映射字典{old_uuid: new_uuid}
@@ -852,17 +937,18 @@ class DeviceNodeResourceTracker(object):
def process(res):
current_uuid = self._get_resource_attr(res, "uuid", "unilabos_uuid")
replaced = 0
if current_uuid and current_uuid in uuid_map:
new_uuid = uuid_map[current_uuid]
if current_uuid != new_uuid:
self._set_resource_uuid(res, new_uuid)
self.set_resource_uuid(res, new_uuid)
# 更新uuid_to_resources映射
if current_uuid in self.uuid_to_resources:
self.uuid_to_resources.pop(current_uuid)
self.uuid_to_resources[new_uuid] = res
logger.debug(f"更新uuid: {current_uuid} -> {new_uuid}")
return 1
return 0
replaced = 1
return replaced
return self._traverse_and_process(resource, process)
@@ -877,8 +963,11 @@ class DeviceNodeResourceTracker(object):
def process(res):
current_uuid = self._get_resource_attr(res, "uuid", "unilabos_uuid")
if current_uuid:
old = self.uuid_to_resources.get(current_uuid)
self.uuid_to_resources[current_uuid] = res
logger.debug(f"收集资源UUID映射: {current_uuid} -> {res}")
logger.debug(
f"收集资源UUID映射: {current_uuid} -> {res} {'' if old is None else f'(覆盖旧值: {old})'}"
)
return 0
self._traverse_and_process(resource, process)
@@ -913,9 +1002,23 @@ class DeviceNodeResourceTracker(object):
Args:
resource: 资源对象可以是dict或实例
"""
root_uuids = {}
for r in self.resources:
res_uuid = r.get("uuid") if isinstance(r, dict) else getattr(r, "unilabos_uuid", None)
if res_uuid:
root_uuids[res_uuid] = r
if id(r) == id(resource):
return
# 这里只做uuid的根节点比较
if isinstance(resource, dict):
res_uuid = resource.get("uuid")
else:
res_uuid = getattr(resource, "unilabos_uuid", None)
if res_uuid in root_uuids:
old_res = root_uuids[res_uuid]
# self.remove_resource(old_res)
logger.warning(f"资源{resource}已存在,旧资源: {old_res}")
self.resources.append(resource)
# 递归收集uuid映射
self._collect_uuid_mapping(resource)
@@ -1046,13 +1149,19 @@ class DeviceNodeResourceTracker(object):
) -> List[Tuple[Any, Any]]:
res_list = []
# print(resource, target_resource_cls_type, identifier_key, compare_value)
children = getattr(resource, "children", [])
children = []
if not isinstance(resource, dict):
children = getattr(resource, "children", [])
else:
children = resource.get("children")
if children is not None:
children = list(children.values()) if isinstance(children, dict) else children
for child in children:
res_list.extend(
self.loop_find_resource(child, target_resource_cls_type, identifier_key, compare_value, resource)
)
if issubclass(type(resource), target_resource_cls_type):
if target_resource_cls_type == dict:
if type(resource) == dict:
# 对于字典类型,直接检查 identifier_key
if identifier_key in resource:
if resource[identifier_key] == compare_value:

View File

@@ -336,6 +336,9 @@ class WorkstationNodeCreator(DeviceClassCreator[T]):
try:
# 创建实例额外补充一个给protocol node的字段后面考虑取消
data["children"] = self.children
for material_id, child in self.children.items():
if child["type"] != "device":
self.resource_tracker.add_resource(self.children[material_id])
deck_dict = data.get("deck")
if deck_dict:
from pylabrobot.resources import Deck, Resource