workflow upload & prcxi transfer liquid

(cherry picked from commit 176de521b4)

.conda/base/recipe.yaml

@@ -46,7 +46,7 @@ requirements:
   - jinja2
   - requests
   - uvicorn
-  - opcua
+  - opcua # [not osx]
   - pyserial
   - pandas
   - pymodbus

scripts/workflow.py

@@ -2,7 +2,6 @@ import json
 import logging
 import traceback
 import uuid
-import xml.etree.ElementTree as ET
 from typing import Any, Dict, List
 
 import networkx as nx
@@ -25,7 +24,15 @@ class SimpleGraph:
 
     def add_edge(self, source, target, **attrs):
         """添加边"""
-        edge = {"source": source, "target": target, **attrs}
+        # edge = {"source": source, "target": target, **attrs}
+        edge = {
+            "source": source, "target": target,
+            "source_node_uuid": source,
+            "target_node_uuid": target,
+            "source_handle_io": "source",
+            "target_handle_io": "target",
+            **attrs
+        }
         self.edges.append(edge)
 
     def to_dict(self):
@@ -42,6 +49,7 @@ class SimpleGraph:
             "multigraph": False,
             "graph": {},
             "nodes": nodes_list,
+            "edges": self.edges,
             "links": self.edges,
         }
 
@@ -58,495 +66,8 @@ def extract_json_from_markdown(text: str) -> str:
     return text
 
 
-def convert_to_type(val: str) -> Any:
-    """将字符串值转换为适当的数据类型"""
-    if val == "True":
-        return True
-    if val == "False":
-        return False
-    if val == "?":
-        return None
-    if val.endswith(" g"):
-        return float(val.split(" ")[0])
-    if val.endswith("mg"):
-        return float(val.split("mg")[0])
-    elif val.endswith("mmol"):
-        return float(val.split("mmol")[0]) / 1000
-    elif val.endswith("mol"):
-        return float(val.split("mol")[0])
-    elif val.endswith("ml"):
-        return float(val.split("ml")[0])
-    elif val.endswith("RPM"):
-        return float(val.split("RPM")[0])
-    elif val.endswith(" °C"):
-        return float(val.split(" ")[0])
-    elif val.endswith(" %"):
-        return float(val.split(" ")[0])
-    return val
 
 
-def refactor_data(data: List[Dict[str, Any]]) -> List[Dict[str, Any]]:
-    """统一的数据重构函数，根据操作类型自动选择模板"""
-    refactored_data = []
-
-    # 定义操作映射，包含生物实验和有机化学的所有操作
-    OPERATION_MAPPING = {
-        # 生物实验操作
-        "transfer_liquid": "SynBioFactory-liquid_handler.prcxi-transfer_liquid",
-        "transfer": "SynBioFactory-liquid_handler.biomek-transfer",
-        "incubation": "SynBioFactory-liquid_handler.biomek-incubation",
-        "move_labware": "SynBioFactory-liquid_handler.biomek-move_labware",
-        "oscillation": "SynBioFactory-liquid_handler.biomek-oscillation",
-        # 有机化学操作
-        "HeatChillToTemp": "SynBioFactory-workstation-HeatChillProtocol",
-        "StopHeatChill": "SynBioFactory-workstation-HeatChillStopProtocol",
-        "StartHeatChill": "SynBioFactory-workstation-HeatChillStartProtocol",
-        "HeatChill": "SynBioFactory-workstation-HeatChillProtocol",
-        "Dissolve": "SynBioFactory-workstation-DissolveProtocol",
-        "Transfer": "SynBioFactory-workstation-TransferProtocol",
-        "Evaporate": "SynBioFactory-workstation-EvaporateProtocol",
-        "Recrystallize": "SynBioFactory-workstation-RecrystallizeProtocol",
-        "Filter": "SynBioFactory-workstation-FilterProtocol",
-        "Dry": "SynBioFactory-workstation-DryProtocol",
-        "Add": "SynBioFactory-workstation-AddProtocol",
-    }
-
-    UNSUPPORTED_OPERATIONS = ["Purge", "Wait", "Stir", "ResetHandling"]
-
-    for step in data:
-        operation = step.get("action")
-        if not operation or operation in UNSUPPORTED_OPERATIONS:
-            continue
-
-        # 处理重复操作
-        if operation == "Repeat":
-            times = step.get("times", step.get("parameters", {}).get("times", 1))
-            sub_steps = step.get("steps", step.get("parameters", {}).get("steps", []))
-            for i in range(int(times)):
-                sub_data = refactor_data(sub_steps)
-                refactored_data.extend(sub_data)
-            continue
-
-        # 获取模板名称
-        template = OPERATION_MAPPING.get(operation)
-        if not template:
-            # 自动推断模板类型
-            if operation.lower() in ["transfer", "incubation", "move_labware", "oscillation"]:
-                template = f"SynBioFactory-liquid_handler.biomek-{operation}"
-            else:
-                template = f"SynBioFactory-workstation-{operation}Protocol"
-
-        # 创建步骤数据
-        step_data = {
-            "template": template,
-            "description": step.get("description", step.get("purpose", f"{operation} operation")),
-            "lab_node_type": "Device",
-            "parameters": step.get("parameters", step.get("action_args", {})),
-        }
-        refactored_data.append(step_data)
-
-    return refactored_data
-
-
-def build_protocol_graph(
-    labware_info: List[Dict[str, Any]], protocol_steps: List[Dict[str, Any]], workstation_name: str
-) -> SimpleGraph:
-    """统一的协议图构建函数，根据设备类型自动选择构建逻辑"""
-    G = SimpleGraph()
-    resource_last_writer = {}
-    LAB_NAME = "SynBioFactory"
-
-    protocol_steps = refactor_data(protocol_steps)
-
-    # 检查协议步骤中的模板来判断协议类型
-    has_biomek_template = any(
-        ("biomek" in step.get("template", "")) or ("prcxi" in step.get("template", ""))
-        for step in protocol_steps
-    )
-
-    if has_biomek_template:
-        # 生物实验协议图构建
-        for labware_id, labware in labware_info.items():
-            node_id = str(uuid.uuid4())
-
-            labware_attrs = labware.copy()
-            labware_id = labware_attrs.pop("id", labware_attrs.get("name", f"labware_{uuid.uuid4()}"))
-            labware_attrs["description"] = labware_id
-            labware_attrs["lab_node_type"] = (
-                "Reagent" if "Plate" in str(labware_id) else "Labware" if "Rack" in str(labware_id) else "Sample"
-            )
-            labware_attrs["device_id"] = workstation_name
-
-            G.add_node(node_id, template=f"{LAB_NAME}-host_node-create_resource", **labware_attrs)
-            resource_last_writer[labware_id] = f"{node_id}:labware"
-
-        # 处理协议步骤
-        prev_node = None
-        for i, step in enumerate(protocol_steps):
-            node_id = str(uuid.uuid4())
-            G.add_node(node_id, **step)
-
-            # 添加控制流边
-            if prev_node is not None:
-                G.add_edge(prev_node, node_id, source_port="ready", target_port="ready")
-            prev_node = node_id
-
-            # 处理物料流
-            params = step.get("parameters", {})
-            if "sources" in params and params["sources"] in resource_last_writer:
-                source_node, source_port = resource_last_writer[params["sources"]].split(":")
-                G.add_edge(source_node, node_id, source_port=source_port, target_port="labware")
-
-            if "targets" in params:
-                resource_last_writer[params["targets"]] = f"{node_id}:labware"
-
-        # 添加协议结束节点
-        end_id = str(uuid.uuid4())
-        G.add_node(end_id, template=f"{LAB_NAME}-liquid_handler.biomek-run_protocol")
-        if prev_node is not None:
-            G.add_edge(prev_node, end_id, source_port="ready", target_port="ready")
-
-    else:
-        # 有机化学协议图构建
-        WORKSTATION_ID = workstation_name
-
-        # 为所有labware创建资源节点
-        for item_id, item in labware_info.items():
-            # item_id = item.get("id") or item.get("name", f"item_{uuid.uuid4()}")
-            node_id = str(uuid.uuid4())
-
-            # 判断节点类型
-            if item.get("type") == "hardware" or "reactor" in str(item_id).lower():
-                if "reactor" not in str(item_id).lower():
-                    continue
-                lab_node_type = "Sample"
-                description = f"Prepare Reactor: {item_id}"
-                liquid_type = []
-                liquid_volume = []
-            else:
-                lab_node_type = "Reagent"
-                description = f"Add Reagent to Flask: {item_id}"
-                liquid_type = [item_id]
-                liquid_volume = [1e5]
-
-            G.add_node(
-                node_id,
-                template=f"{LAB_NAME}-host_node-create_resource",
-                description=description,
-                lab_node_type=lab_node_type,
-                res_id=item_id,
-                device_id=WORKSTATION_ID,
-                class_name="container",
-                parent=WORKSTATION_ID,
-                bind_locations={"x": 0.0, "y": 0.0, "z": 0.0},
-                liquid_input_slot=[-1],
-                liquid_type=liquid_type,
-                liquid_volume=liquid_volume,
-                slot_on_deck="",
-                role=item.get("role", ""),
-            )
-            resource_last_writer[item_id] = f"{node_id}:labware"
-
-        last_control_node_id = None
-
-        # 处理协议步骤
-        for step in protocol_steps:
-            node_id = str(uuid.uuid4())
-            G.add_node(node_id, **step)
-
-            # 控制流
-            if last_control_node_id is not None:
-                G.add_edge(last_control_node_id, node_id, source_port="ready", target_port="ready")
-            last_control_node_id = node_id
-
-            # 物料流
-            params = step.get("parameters", {})
-            input_resources = {
-                "Vessel": params.get("vessel"),
-                "ToVessel": params.get("to_vessel"),
-                "FromVessel": params.get("from_vessel"),
-                "reagent": params.get("reagent"),
-                "solvent": params.get("solvent"),
-                "compound": params.get("compound"),
-                "sources": params.get("sources"),
-                "targets": params.get("targets"),
-            }
-
-            for target_port, resource_name in input_resources.items():
-                if resource_name and resource_name in resource_last_writer:
-                    source_node, source_port = resource_last_writer[resource_name].split(":")
-                    G.add_edge(source_node, node_id, source_port=source_port, target_port=target_port)
-
-            output_resources = {
-                "VesselOut": params.get("vessel"),
-                "FromVesselOut": params.get("from_vessel"),
-                "ToVesselOut": params.get("to_vessel"),
-                "FiltrateOut": params.get("filtrate_vessel"),
-                "reagent": params.get("reagent"),
-                "solvent": params.get("solvent"),
-                "compound": params.get("compound"),
-                "sources_out": params.get("sources"),
-                "targets_out": params.get("targets"),
-            }
-
-            for source_port, resource_name in output_resources.items():
-                if resource_name:
-                    resource_last_writer[resource_name] = f"{node_id}:{source_port}"
-
-    return G
-
-
-def draw_protocol_graph(protocol_graph: SimpleGraph, output_path: str):
-    """
-    (辅助功能) 使用 networkx 和 matplotlib 绘制协议工作流图，用于可视化。
-    """
-    if not protocol_graph:
-        print("Cannot draw graph: Graph object is empty.")
-        return
-
-    G = nx.DiGraph()
-
-    for node_id, attrs in protocol_graph.nodes.items():
-        label = attrs.get("description", attrs.get("template", node_id[:8]))
-        G.add_node(node_id, label=label, **attrs)
-
-    for edge in protocol_graph.edges:
-        G.add_edge(edge["source"], edge["target"])
-
-    plt.figure(figsize=(20, 15))
-    try:
-        pos = nx.nx_agraph.graphviz_layout(G, prog="dot")
-    except Exception:
-        pos = nx.shell_layout(G)  # Fallback layout
-
-    node_labels = {node: data["label"] for node, data in G.nodes(data=True)}
-    nx.draw(
-        G,
-        pos,
-        with_labels=False,
-        node_size=2500,
-        node_color="skyblue",
-        node_shape="o",
-        edge_color="gray",
-        width=1.5,
-        arrowsize=15,
-    )
-    nx.draw_networkx_labels(G, pos, labels=node_labels, font_size=8, font_weight="bold")
-
-    plt.title("Chemical Protocol Workflow Graph", size=15)
-    plt.savefig(output_path, dpi=300, bbox_inches="tight")
-    plt.close()
-    print(f"  - Visualization saved to '{output_path}'")
-
-
-from networkx.drawing.nx_agraph import to_agraph
-import re
-
-COMPASS = {"n","e","s","w","ne","nw","se","sw","c"}
-
-def _is_compass(port: str) -> bool:
-    return isinstance(port, str) and port.lower() in COMPASS
-
-def draw_protocol_graph_with_ports(protocol_graph, output_path: str, rankdir: str = "LR"):
-    """
-    使用 Graphviz 端口语法绘制协议工作流图。
-    - 若边上的 source_port/target_port 是 compass（n/e/s/w/...），直接用 compass。
-    - 否则自动为节点创建 record 形状并定义命名端口 <portname>。
-    最终由 PyGraphviz 渲染并输出到 output_path（后缀决定格式，如 .png/.svg/.pdf）。
-    """
-    if not protocol_graph:
-        print("Cannot draw graph: Graph object is empty.")
-        return
-
-    # 1) 先用 networkx 搭建有向图，保留端口属性
-    G = nx.DiGraph()
-    for node_id, attrs in protocol_graph.nodes.items():
-        label = attrs.get("description", attrs.get("template", node_id[:8]))
-        # 保留一个干净的“中心标签”，用于放在 record 的中间槽
-        G.add_node(node_id, _core_label=str(label), **{k:v for k,v in attrs.items() if k not in ("label",)})
-
-    edges_data = []
-    in_ports_by_node  = {}  # 收集命名输入端口
-    out_ports_by_node = {}  # 收集命名输出端口
-
-    for edge in protocol_graph.edges:
-        u = edge["source"]
-        v = edge["target"]
-        sp = edge.get("source_port")
-        tp = edge.get("target_port")
-
-        # 记录到图里（保留原始端口信息）
-        G.add_edge(u, v, source_port=sp, target_port=tp)
-        edges_data.append((u, v, sp, tp))
-
-        # 如果不是 compass，就按“命名端口”先归类，等会儿给节点造 record
-        if sp and not _is_compass(sp):
-            out_ports_by_node.setdefault(u, set()).add(str(sp))
-        if tp and not _is_compass(tp):
-            in_ports_by_node.setdefault(v, set()).add(str(tp))
-
-    # 2) 转为 AGraph，使用 Graphviz 渲染
-    A = to_agraph(G)
-    A.graph_attr.update(rankdir=rankdir, splines="true", concentrate="false", fontsize="10")
-    A.node_attr.update(shape="box", style="rounded,filled", fillcolor="lightyellow", color="#999999", fontname="Helvetica")
-    A.edge_attr.update(arrowsize="0.8", color="#666666")
-
-    # 3) 为需要命名端口的节点设置 record 形状与 label
-    #    左列 = 输入端口；中间 = 核心标签；右列 = 输出端口
-    for n in A.nodes():
-        node = A.get_node(n)
-        core = G.nodes[n].get("_core_label", n)
-
-        in_ports  = sorted(in_ports_by_node.get(n, []))
-        out_ports = sorted(out_ports_by_node.get(n, []))
-
-        # 如果该节点涉及命名端口，则用 record；否则保留原 box
-        if in_ports or out_ports:
-            def port_fields(ports):
-                if not ports:
-                    return " "  # 必须留一个空槽占位
-                # 每个端口一个小格子，<p> name
-                return "|".join(f"<{re.sub(r'[^A-Za-z0-9_:.|-]', '_', p)}> {p}" for p in ports)
-
-            left  = port_fields(in_ports)
-            right = port_fields(out_ports)
-
-            # 三栏：左(入) | 中(节点名) | 右(出)
-            record_label = f"{{ {left} | {core} | {right} }}"
-            node.attr.update(shape="record", label=record_label)
-        else:
-            # 没有命名端口：普通盒子，显示核心标签
-            node.attr.update(label=str(core))
-
-    # 4) 给边设置 headport / tailport
-    #    - 若端口为 compass：直接用 compass（e.g., headport="e"）
-    #    - 若端口为命名端口：使用在 record 中定义的 <port> 名（同名即可）
-    for (u, v, sp, tp) in edges_data:
-        e = A.get_edge(u, v)
-
-        # Graphviz 属性：tail 是源，head 是目标
-        if sp:
-            if _is_compass(sp):
-                e.attr["tailport"] = sp.lower()
-            else:
-                # 与 record label 中 <port> 名一致；特殊字符已在 label 中做了清洗
-                e.attr["tailport"] = re.sub(r'[^A-Za-z0-9_:.|-]', '_', str(sp))
-
-        if tp:
-            if _is_compass(tp):
-                e.attr["headport"] = tp.lower()
-            else:
-                e.attr["headport"] = re.sub(r'[^A-Za-z0-9_:.|-]', '_', str(tp))
-
-        # 可选：若想让边更贴边缘，可设置 constraint/spline 等
-        # e.attr["arrowhead"] = "vee"
-
-    # 5) 输出
-    A.draw(output_path, prog="dot")
-    print(f"  - Port-aware workflow rendered to '{output_path}'")
-
-
-def flatten_xdl_procedure(procedure_elem: ET.Element) -> List[ET.Element]:
-    """展平嵌套的XDL程序结构"""
-    flattened_operations = []
-    TEMP_UNSUPPORTED_PROTOCOL = ["Purge", "Wait", "Stir", "ResetHandling"]
-
-    def extract_operations(element: ET.Element):
-        if element.tag not in ["Prep", "Reaction", "Workup", "Purification", "Procedure"]:
-            if element.tag not in TEMP_UNSUPPORTED_PROTOCOL:
-                flattened_operations.append(element)
-
-        for child in element:
-            extract_operations(child)
-
-    for child in procedure_elem:
-        extract_operations(child)
-
-    return flattened_operations
-
-
-def parse_xdl_content(xdl_content: str) -> tuple:
-    """解析XDL内容"""
-    try:
-        xdl_content_cleaned = "".join(c for c in xdl_content if c.isprintable())
-        root = ET.fromstring(xdl_content_cleaned)
-
-        synthesis_elem = root.find("Synthesis")
-        if synthesis_elem is None:
-            return None, None, None
-
-        # 解析硬件组件
-        hardware_elem = synthesis_elem.find("Hardware")
-        hardware = []
-        if hardware_elem is not None:
-            hardware = [{"id": c.get("id"), "type": c.get("type")} for c in hardware_elem.findall("Component")]
-
-        # 解析试剂
-        reagents_elem = synthesis_elem.find("Reagents")
-        reagents = []
-        if reagents_elem is not None:
-            reagents = [{"name": r.get("name"), "role": r.get("role", "")} for r in reagents_elem.findall("Reagent")]
-
-        # 解析程序
-        procedure_elem = synthesis_elem.find("Procedure")
-        if procedure_elem is None:
-            return None, None, None
-
-        flattened_operations = flatten_xdl_procedure(procedure_elem)
-        return hardware, reagents, flattened_operations
-
-    except ET.ParseError as e:
-        raise ValueError(f"Invalid XDL format: {e}")
-
-
-def convert_xdl_to_dict(xdl_content: str) -> Dict[str, Any]:
-    """
-    将XDL XML格式转换为标准的字典格式
-
-    Args:
-        xdl_content: XDL XML内容
-
-    Returns:
-        转换结果，包含步骤和器材信息
-    """
-    try:
-        hardware, reagents, flattened_operations = parse_xdl_content(xdl_content)
-        if hardware is None:
-            return {"error": "Failed to parse XDL content", "success": False}
-
-        # 将XDL元素转换为字典格式
-        steps_data = []
-        for elem in flattened_operations:
-            # 转换参数类型
-            parameters = {}
-            for key, val in elem.attrib.items():
-                converted_val = convert_to_type(val)
-                if converted_val is not None:
-                    parameters[key] = converted_val
-
-            step_dict = {
-                "operation": elem.tag,
-                "parameters": parameters,
-                "description": elem.get("purpose", f"Operation: {elem.tag}"),
-            }
-            steps_data.append(step_dict)
-
-        # 合并硬件和试剂为统一的labware_info格式
-        labware_data = []
-        labware_data.extend({"id": hw["id"], "type": "hardware", **hw} for hw in hardware)
-        labware_data.extend({"name": reagent["name"], "type": "reagent", **reagent} for reagent in reagents)
-
-        return {
-            "success": True,
-            "steps": steps_data,
-            "labware": labware_data,
-            "message": f"Successfully converted XDL to dict format. Found {len(steps_data)} steps and {len(labware_data)} labware items.",
-        }
-
-    except Exception as e:
-        error_msg = f"XDL conversion failed: {str(e)}"
-        logger.error(error_msg)
-        return {"error": error_msg, "success": False}
 
 
 def create_workflow(

unilabos/app/ws_client.py

@@ -439,7 +439,7 @@ class MessageProcessor:
                     self.connected = True
                     self.reconnect_count = 0
 
-                    logger.info(f"[MessageProcessor] Connected to {self.websocket_url}")
+                    logger.trace(f"[MessageProcessor] Connected to {self.websocket_url}")
 
                     # 启动发送协程
                     send_task = asyncio.create_task(self._send_handler())
@@ -517,7 +517,7 @@ class MessageProcessor:
 
     async def _send_handler(self):
         """处理发送队列中的消息"""
-        logger.debug("[MessageProcessor] Send handler started")
+        logger.trace("[MessageProcessor] Send handler started")
 
         try:
             while self.connected and self.websocket:
@@ -1026,7 +1026,7 @@ class QueueProcessor:
 
     def _run(self):
         """运行队列处理主循环"""
-        logger.debug("[QueueProcessor] Queue processor started")
+        logger.trace("[QueueProcessor] Queue processor started")
 
         while self.is_running:
             try:
@@ -1236,7 +1236,6 @@ class WebSocketClient(BaseCommunicationClient):
         else:
             url = f"{scheme}://{parsed.netloc}/api/v1/ws/schedule"
 
-        logger.debug(f"[WebSocketClient] URL: {url}")
         return url
 
     def start(self) -> None:
@@ -1249,13 +1248,11 @@ class WebSocketClient(BaseCommunicationClient):
             logger.error("[WebSocketClient] WebSocket URL not configured")
             return
 
-        logger.info(f"[WebSocketClient] Starting connection to {self.websocket_url}")
-
         # 启动两个核心线程
         self.message_processor.start()
         self.queue_processor.start()
 
-        logger.info("[WebSocketClient] All threads started")
+        logger.trace("[WebSocketClient] All threads started")
 
     def stop(self) -> None:
         """停止WebSocket客户端"""

unilabos/devices/liquid_handling/liquid_handler_abstract.py

@@ -1,15 +1,11 @@
 from __future__ import annotations
 
-import asyncio
 import time
 import traceback
 from collections import Counter
 from typing import List, Sequence, Optional, Literal, Union, Iterator, Dict, Any, Callable, Set, cast
 
-from typing_extensions import TypedDict
 from pylabrobot.liquid_handling import LiquidHandler, LiquidHandlerBackend, LiquidHandlerChatterboxBackend, Strictness
-from unilabos.devices.liquid_handling.rviz_backend import UniLiquidHandlerRvizBackend
-from unilabos.devices.liquid_handling.laiyu.backend.laiyu_v_backend import UniLiquidHandlerLaiyuBackend
 from pylabrobot.liquid_handling.liquid_handler import TipPresenceProbingMethod
 from pylabrobot.liquid_handling.standard import GripDirection
 from pylabrobot.resources import (
@@ -27,26 +23,33 @@ from pylabrobot.resources import (
     Trash,
     Tip,
 )
+from typing_extensions import TypedDict
 
+from unilabos.devices.liquid_handling.rviz_backend import UniLiquidHandlerRvizBackend
 from unilabos.registry.placeholder_type import ResourceSlot
-from unilabos.ros.nodes.base_device_node import BaseROS2DeviceNode
-from unilabos.resources.resource_tracker import ResourceTreeSet
+from unilabos.resources.resource_tracker import ResourceTreeSet, ResourceDict
+from unilabos.ros.nodes.base_device_node import BaseROS2DeviceNode, ROS2DeviceNode
 
 
 class SimpleReturn(TypedDict):
-    samples: list
-    volumes: list
+    samples: List[List[ResourceDict]]
+    volumes: List[float]
 
 
 class SetLiquidReturn(TypedDict):
-    wells: list
-    volumes: list
+    wells: List[List[ResourceDict]]
+    volumes: List[float]
 
 
 class SetLiquidFromPlateReturn(TypedDict):
-    plate: list
-    wells: list
-    volumes: list
+    plate: List[List[ResourceDict]]
+    wells: List[List[ResourceDict]]
+    volumes: List[float]
+
+
+class TransferLiquidReturn(TypedDict):
+    sources: List[List[ResourceDict]]
+    targets: List[List[ResourceDict]]
 
 
 class LiquidHandlerMiddleware(LiquidHandler):
@@ -682,14 +685,17 @@ class LiquidHandlerAbstract(LiquidHandlerMiddleware):
             wells=ResourceTreeSet.from_plr_resources(wells, known_newly_created=False).dump(), volumes=res_volumes  # type: ignore
         )
 
-    @classmethod
     def set_liquid_from_plate(
-        cls, plate: ResourceSlot, well_names: list[str], liquid_names: list[str], volumes: list[float]
+        self, plate: List[ResourceSlot], well_names: list[str], liquid_names: list[str], volumes: list[float]
     ) -> SetLiquidFromPlateReturn:
         """Set the liquid in wells of a plate by well names (e.g., A1, A2, B3).
 
         如果 liquid_names 和 volumes 为空，但 plate 和 well_names 不为空，直接返回 plate 和 wells。
         """
+        if isinstance(plate, list):  # 未来移除
+            plate = plate[0]
+        assert issubclass(plate.__class__, Plate), "plate must be a Plate"
+        plate: Plate = cast(Plate, plate)
         # 根据 well_names 获取对应的 Well 对象
         wells = [plate.get_well(name) for name in well_names]
         res_volumes = []
@@ -706,6 +712,14 @@ class LiquidHandlerAbstract(LiquidHandlerMiddleware):
             well.set_liquids([(liquid_name, volume)])  # type: ignore
             res_volumes.append(volume)
 
+        task = ROS2DeviceNode.run_async_func(self._ros_node.update_resource, True, **{"resources": wells})
+        submit_time = time.time()
+        while not task.done():
+            if time.time() - submit_time > 10:
+                self._ros_node.lab_logger().info(f"set_liquid_from_plate {plate} 超时")
+                break
+            time.sleep(0.01)
+
         return SetLiquidFromPlateReturn(
             plate=ResourceTreeSet.from_plr_resources([plate], known_newly_created=False).dump(),  # type: ignore
             wells=ResourceTreeSet.from_plr_resources(wells, known_newly_created=False).dump(),  # type: ignore
@@ -1111,7 +1125,7 @@ class LiquidHandlerAbstract(LiquidHandlerMiddleware):
         mix_liquid_height: Optional[float] = None,
         delays: Optional[List[int]] = None,
         none_keys: List[str] = [],
-    ):
+    ) -> TransferLiquidReturn:
         """Transfer liquid with automatic mode detection.
 
         Supports three transfer modes:
@@ -1251,6 +1265,11 @@ class LiquidHandlerAbstract(LiquidHandlerMiddleware):
                 "Supported modes: 1->N, N->1, or N->N."
             )
 
+        return TransferLiquidReturn(
+            sources=ResourceTreeSet.from_plr_resources(list(sources), known_newly_created=False).dump(),  # type: ignore
+            targets=ResourceTreeSet.from_plr_resources(list(targets), known_newly_created=False).dump(),  # type: ignore
+        )
+
     async def _transfer_one_to_one(
         self,
         sources: Sequence[Container],

unilabos/devices/liquid_handling/prcxi/prcxi.py

@@ -52,6 +52,7 @@ from unilabos.devices.liquid_handling.liquid_handler_abstract import (
     SimpleReturn,
     SetLiquidReturn,
     SetLiquidFromPlateReturn,
+    TransferLiquidReturn,
 )
 from unilabos.registry.placeholder_type import ResourceSlot
 from unilabos.ros.nodes.base_device_node import BaseROS2DeviceNode
@@ -154,25 +155,29 @@ class PRCXI9300Plate(Plate):
         **kwargs,
     ):
         # 如果 ordered_items 不为 None，直接使用
+        items = None
+        ordering_param = None
         if ordered_items is not None:
             items = ordered_items
         elif ordering is not None:
             # 检查 ordering 中的值是否是字符串（从 JSON 反序列化时的情况）
             # 如果是字符串，说明这是位置名称，需要让 Plate 自己创建 Well 对象
             # 我们只传递位置信息（键），不传递值，使用 ordering 参数
-            if ordering and isinstance(next(iter(ordering.values()), None), str):
-                # ordering 的值是字符串，只使用键（位置信息）创建新的 OrderedDict
-                # 传递 ordering 参数而不是 ordered_items，让 Plate 自己创建 Well 对象
-                items = None
-                # 使用 ordering 参数，只包含位置信息（键）
-                ordering_param = collections.OrderedDict((k, None) for k in ordering.keys())
+            if ordering:
+                values = list(ordering.values())
+                value = values[0]
+                if isinstance(value, str):
+                    # ordering 的值是字符串，只使用键（位置信息）创建新的 OrderedDict
+                    # 传递 ordering 参数而不是 ordered_items，让 Plate 自己创建 Well 对象
+                    items = None
+                    # 使用 ordering 参数，只包含位置信息（键）
+                    ordering_param = collections.OrderedDict((k, None) for k in ordering.keys())
+                elif value is None:
+                    ordering_param = ordering
             else:
                 # ordering 的值已经是对象，可以直接使用
                 items = ordering
                 ordering_param = None
-        else:
-            items = None
-            ordering_param = None
 
         # 根据情况传递不同的参数
         if items is not None:
@@ -590,7 +595,7 @@ class PRCXI9300Handler(LiquidHandlerAbstract):
         return super().set_liquid(wells, liquid_names, volumes)
 
     def set_liquid_from_plate(
-        self, plate: ResourceSlot, well_names: list[str], liquid_names: list[str], volumes: list[float]
+        self, plate: List[ResourceSlot], well_names: list[str], liquid_names: list[str], volumes: list[float]
     ) -> SetLiquidFromPlateReturn:
         return super().set_liquid_from_plate(plate, well_names, liquid_names, volumes)
 
@@ -713,7 +718,7 @@ class PRCXI9300Handler(LiquidHandlerAbstract):
         mix_liquid_height: Optional[float] = None,
         delays: Optional[List[int]] = None,
         none_keys: List[str] = [],
-    ):
+    ) -> TransferLiquidReturn:
         return await super().transfer_liquid(
             sources,
             targets,

unilabos/registry/devices/liquid_handler.yaml

@@ -638,7 +638,7 @@ liquid_handler:
         placeholder_keys: {}
         result: {}
         schema:
-          description: 吸头迭代函数。用于自动管理和切换吸头架中的吸头，实现批量实验中的吸头自动分配和追踪。该函数监控吸头使用状态，自动切换到下一个可用吸头位置，确保实验流程的连续性。适用于高通量实验、批量处理、自动化流水线等需要大量吸头管理的应用场景。
+          description: 吸头迭代函数。用于自动管理和切换枪头盒中的吸头，实现批量实验中的吸头自动分配和追踪。该函数监控吸头使用状态，自动切换到下一个可用吸头位置，确保实验流程的连续性。适用于高通量实验、批量处理、自动化流水线等需要大量吸头管理的应用场景。
           properties:
             feedback: {}
             goal:
@@ -712,6 +712,43 @@ liquid_handler:
           title: set_group参数
           type: object
         type: UniLabJsonCommand
+      auto-set_liquid_from_plate:
+        feedback: {}
+        goal: {}
+        goal_default:
+          liquid_names: null
+          plate: null
+          volumes: null
+          well_names: null
+        handles: {}
+        placeholder_keys: {}
+        result: {}
+        schema:
+          description: ''
+          properties:
+            feedback: {}
+            goal:
+              properties:
+                liquid_names:
+                  type: string
+                plate:
+                  type: string
+                volumes:
+                  type: string
+                well_names:
+                  type: string
+              required:
+              - plate
+              - well_names
+              - liquid_names
+              - volumes
+              type: object
+            result: {}
+          required:
+          - goal
+          title: set_liquid_from_plate参数
+          type: object
+        type: UniLabJsonCommand
       auto-set_tiprack:
         feedback: {}
         goal: {}
@@ -721,7 +758,7 @@ liquid_handler:
         placeholder_keys: {}
         result: {}
         schema:
-          description: 吸头架设置函数。用于配置和初始化液体处理系统的吸头架信息，包括吸头架位置、类型、容量等参数。该函数建立吸头资源管理系统，为后续的吸头选择和使用提供基础配置。适用于系统初始化、吸头架更换、实验配置等需要吸头资源管理的操作场景。
+          description: 枪头盒设置函数。用于配置和初始化液体处理系统的枪头盒信息，包括枪头盒位置、类型、容量等参数。该函数建立吸头资源管理系统，为后续的吸头选择和使用提供基础配置。适用于系统初始化、枪头盒更换、实验配置等需要吸头资源管理的操作场景。
           properties:
             feedback: {}
             goal:
@@ -4093,32 +4130,32 @@ liquid_handler:
           - 0
         handles:
           input:
-          - data_key: liquid
+          - data_key: sources
             data_source: handle
             data_type: resource
             handler_key: sources
-            label: sources
-          - data_key: liquid
-            data_source: executor
-            data_type: resource
-            handler_key: targets
-            label: targets
-          - data_key: liquid
-            data_source: executor
-            data_type: resource
-            handler_key: tip_rack
-            label: tip_rack
-          output:
-          - data_key: liquid
+            label: 待移动液体
+          - data_key: targets
             data_source: handle
             data_type: resource
+            handler_key: targets
+            label: 转移目标
+          - data_key: tip_racks
+            data_source: handle
+            data_type: resource
+            handler_key: tip_rack
+            label: 枪头盒
+          output:
+          - data_key: sources.@flatten
+            data_source: executor
+            data_type: resource
             handler_key: sources_out
-            label: sources
-          - data_key: liquid
+            label: 移液后源孔
+          - data_key: targets.@flatten
             data_source: executor
             data_type: resource
             handler_key: targets_out
-            label: targets
+            label: 移液后目标孔
         placeholder_keys:
           sources: unilabos_resources
           targets: unilabos_resources
@@ -5114,19 +5151,34 @@ liquid_handler.biomek:
           - 0
         handles:
           input:
-          - data_key: liquid
+          - data_key: sources
             data_source: handle
             data_type: resource
-            handler_key: liquid-input
+            handler_key: sources
             io_type: target
-            label: Liquid Input
+            label: 待移动液体
+          - data_key: targets
+            data_source: handle
+            data_type: resource
+            handler_key: targets
+            label: 转移目标
+          - data_key: tip_racks
+            data_source: handle
+            data_type: resource
+            handler_key: tip_rack
+            label: 枪头盒
           output:
-          - data_key: liquid
+          - data_key: sources.@flatten
             data_source: executor
             data_type: resource
-            handler_key: liquid-output
+            handler_key: sources_out
             io_type: source
-            label: Liquid Output
+            label: 移液后源孔
+          - data_key: targets.@flatten
+            data_source: executor
+            data_type: resource
+            handler_key: targets_out
+            label: 移液后目标孔
         placeholder_keys:
           sources: unilabos_resources
           targets: unilabos_resources
@@ -9451,78 +9503,81 @@ liquid_handler.prcxi:
                     type: string
                   type: array
                 plate:
-                  properties:
-                    category:
-                      type: string
-                    children:
-                      items:
+                  items:
+                    properties:
+                      category:
                         type: string
-                      type: array
-                    config:
-                      type: string
-                    data:
-                      type: string
-                    id:
-                      type: string
-                    name:
-                      type: string
-                    parent:
-                      type: string
-                    pose:
-                      properties:
-                        orientation:
-                          properties:
-                            w:
-                              type: number
-                            x:
-                              type: number
-                            y:
-                              type: number
-                            z:
-                              type: number
-                          required:
-                          - x
-                          - y
-                          - z
-                          - w
-                          title: orientation
-                          type: object
-                        position:
-                          properties:
-                            x:
-                              type: number
-                            y:
-                              type: number
-                            z:
-                              type: number
-                          required:
-                          - x
-                          - y
-                          - z
-                          title: position
-                          type: object
-                      required:
-                      - position
-                      - orientation
-                      title: pose
-                      type: object
-                    sample_id:
-                      type: string
-                    type:
-                      type: string
-                  required:
-                  - id
-                  - name
-                  - sample_id
-                  - children
-                  - parent
-                  - type
-                  - category
-                  - pose
-                  - config
-                  - data
+                      children:
+                        items:
+                          type: string
+                        type: array
+                      config:
+                        type: string
+                      data:
+                        type: string
+                      id:
+                        type: string
+                      name:
+                        type: string
+                      parent:
+                        type: string
+                      pose:
+                        properties:
+                          orientation:
+                            properties:
+                              w:
+                                type: number
+                              x:
+                                type: number
+                              y:
+                                type: number
+                              z:
+                                type: number
+                            required:
+                            - x
+                            - y
+                            - z
+                            - w
+                            title: orientation
+                            type: object
+                          position:
+                            properties:
+                              x:
+                                type: number
+                              y:
+                                type: number
+                              z:
+                                type: number
+                            required:
+                            - x
+                            - y
+                            - z
+                            title: position
+                            type: object
+                        required:
+                        - position
+                        - orientation
+                        title: pose
+                        type: object
+                      sample_id:
+                        type: string
+                      type:
+                        type: string
+                    required:
+                    - id
+                    - name
+                    - sample_id
+                    - children
+                    - parent
+                    - type
+                    - category
+                    - pose
+                    - config
+                    - data
+                    title: plate
+                    type: object
                   title: plate
-                  type: object
+                  type: array
                 volumes:
                   items:
                     type: number
@@ -9544,8 +9599,7 @@ liquid_handler.prcxi:
                   title: Plate
                   type: array
                 volumes:
-                  items:
-                    type: number
+                  items: {}
                   title: Volumes
                   type: array
                 wells:
@@ -9922,18 +9976,18 @@ liquid_handler.prcxi:
             data_source: handle
             data_type: resource
             handler_key: tip_rack_identifier
-            label: 墙头盒
+            label: 枪头盒
           output:
-          - data_key: liquid
-            data_source: handle
+          - data_key: sources.@flatten
+            data_source: executor
             data_type: resource
             handler_key: sources_out
-            label: sources
-          - data_key: liquid
+            label: 移液后源孔
+          - data_key: targets.@flatten
             data_source: executor
             data_type: resource
             handler_key: targets_out
-            label: targets
+            label: 移液后目标孔
         placeholder_keys:
           sources: unilabos_resources
           targets: unilabos_resources

unilabos/registry/registry.py

@@ -4,6 +4,8 @@ import os
 import sys
 import inspect
 import importlib
+import threading
+from concurrent.futures import ThreadPoolExecutor, as_completed
 from pathlib import Path
 from typing import Any, Dict, List, Union, Tuple
 
@@ -60,6 +62,7 @@ class Registry:
         self.device_module_to_registry = {}
         self.resource_type_registry = {}
         self._setup_called = False  # 跟踪setup是否已调用
+        self._registry_lock = threading.Lock()  # 多线程加载时的锁
         # 其他状态变量
         # self.is_host_mode = False  # 移至BasicConfig中
 
@@ -177,8 +180,7 @@ class Registry:
                                 "result": {},
                                 "schema": test_latency_schema,
                                 "goal_default": {
-                                    arg["name"]: arg["default"]
-                                    for arg in test_latency_method_info.get("args", [])
+                                    arg["name"]: arg["default"] for arg in test_latency_method_info.get("args", [])
                                 },
                                 "handles": {},
                             },
@@ -262,67 +264,115 @@ class Registry:
         # 标记setup已被调用
         self._setup_called = True
 
+    def _load_single_resource_file(
+        self, file: Path, complete_registry: bool, upload_registry: bool
+    ) -> Tuple[Dict[str, Any], Dict[str, Any], bool]:
+        """
+        加载单个资源文件 (线程安全)
+
+        Returns:
+            (data, complete_data, is_valid): 资源数据, 完整数据, 是否有效
+        """
+        try:
+            with open(file, encoding="utf-8", mode="r") as f:
+                data = yaml.safe_load(io.StringIO(f.read()))
+        except Exception as e:
+            logger.warning(f"[UniLab Registry] 读取资源文件失败: {file}, 错误: {e}")
+            return {}, {}, False
+
+        if not data:
+            return {}, {}, False
+
+        complete_data = {}
+        for resource_id, resource_info in data.items():
+            if "version" not in resource_info:
+                resource_info["version"] = "1.0.0"
+            if "category" not in resource_info:
+                resource_info["category"] = [file.stem]
+            elif file.stem not in resource_info["category"]:
+                resource_info["category"].append(file.stem)
+            elif not isinstance(resource_info.get("category"), list):
+                resource_info["category"] = [resource_info["category"]]
+            if "config_info" not in resource_info:
+                resource_info["config_info"] = []
+            if "icon" not in resource_info:
+                resource_info["icon"] = ""
+            if "handles" not in resource_info:
+                resource_info["handles"] = []
+            if "init_param_schema" not in resource_info:
+                resource_info["init_param_schema"] = {}
+            if "config_info" in resource_info:
+                del resource_info["config_info"]
+            if "file_path" in resource_info:
+                del resource_info["file_path"]
+            complete_data[resource_id] = copy.deepcopy(dict(sorted(resource_info.items())))
+            if upload_registry:
+                class_info = resource_info.get("class", {})
+                if len(class_info) and "module" in class_info:
+                    if class_info.get("type") == "pylabrobot":
+                        res_class = get_class(class_info["module"])
+                        if callable(res_class) and not isinstance(res_class, type):
+                            res_instance = res_class(res_class.__name__)
+                            res_ulr = tree_to_list([resource_plr_to_ulab(res_instance)])
+                            resource_info["config_info"] = res_ulr
+            resource_info["registry_type"] = "resource"
+            resource_info["file_path"] = str(file.absolute()).replace("\\", "/")
+
+        complete_data = dict(sorted(complete_data.items()))
+        complete_data = copy.deepcopy(complete_data)
+
+        if complete_registry:
+            try:
+                with open(file, "w", encoding="utf-8") as f:
+                    yaml.dump(complete_data, f, allow_unicode=True, default_flow_style=False, Dumper=NoAliasDumper)
+            except Exception as e:
+                logger.warning(f"[UniLab Registry] 写入资源文件失败: {file}, 错误: {e}")
+
+        return data, complete_data, True
+
     def load_resource_types(self, path: os.PathLike, complete_registry: bool, upload_registry: bool):
         abs_path = Path(path).absolute()
         resource_path = abs_path / "resources"
         files = list(resource_path.glob("*/*.yaml"))
         logger.debug(f"[UniLab Registry] resources: {resource_path.exists()}, total: {len(files)}")
-        current_resource_number = len(self.resource_type_registry) + 1
-        for i, file in enumerate(files):
-            with open(file, encoding="utf-8", mode="r") as f:
-                data = yaml.safe_load(io.StringIO(f.read()))
-            complete_data = {}
-            if data:
-                # 为每个资源添加文件路径信息
-                for resource_id, resource_info in data.items():
-                    if "version" not in resource_info:
-                        resource_info["version"] = "1.0.0"
-                    if "category" not in resource_info:
-                        resource_info["category"] = [file.stem]
-                    elif file.stem not in resource_info["category"]:
-                        resource_info["category"].append(file.stem)
-                    elif not isinstance(resource_info.get("category"), list):
-                        resource_info["category"] = [resource_info["category"]]
-                    if "config_info" not in resource_info:
-                        resource_info["config_info"] = []
-                    if "icon" not in resource_info:
-                        resource_info["icon"] = ""
-                    if "handles" not in resource_info:
-                        resource_info["handles"] = []
-                    if "init_param_schema" not in resource_info:
-                        resource_info["init_param_schema"] = {}
-                    if "config_info" in resource_info:
-                        del resource_info["config_info"]
-                    if "file_path" in resource_info:
-                        del resource_info["file_path"]
-                    complete_data[resource_id] = copy.deepcopy(dict(sorted(resource_info.items())))
-                    if upload_registry:
-                        class_info = resource_info.get("class", {})
-                        if len(class_info) and "module" in class_info:
-                            if class_info.get("type") == "pylabrobot":
-                                res_class = get_class(class_info["module"])
-                                if callable(res_class) and not isinstance(
-                                    res_class, type
-                                ):  # 有的是类，有的是函数，这里暂时只登记函数类的
-                                    res_instance = res_class(res_class.__name__)
-                                    res_ulr = tree_to_list([resource_plr_to_ulab(res_instance)])
-                                    resource_info["config_info"] = res_ulr
-                    resource_info["registry_type"] = "resource"
-                    resource_info["file_path"] = str(file.absolute()).replace("\\", "/")
-                complete_data = dict(sorted(complete_data.items()))
-                complete_data = copy.deepcopy(complete_data)
-                if complete_registry:
-                    with open(file, "w", encoding="utf-8") as f:
-                        yaml.dump(complete_data, f, allow_unicode=True, default_flow_style=False, Dumper=NoAliasDumper)
 
+        if not files:
+            return
+
+        # 使用线程池并行加载
+        max_workers = min(8, len(files))
+        results = []
+
+        with ThreadPoolExecutor(max_workers=max_workers) as executor:
+            future_to_file = {
+                executor.submit(self._load_single_resource_file, file, complete_registry, upload_registry): file
+                for file in files
+            }
+            for future in as_completed(future_to_file):
+                file = future_to_file[future]
+                try:
+                    data, complete_data, is_valid = future.result()
+                    if is_valid:
+                        results.append((file, data))
+                except Exception as e:
+                    logger.warning(f"[UniLab Registry] 处理资源文件异常: {file}, 错误: {e}")
+
+        # 线程安全地更新注册表
+        current_resource_number = len(self.resource_type_registry) + 1
+        with self._registry_lock:
+            for i, (file, data) in enumerate(results):
                 self.resource_type_registry.update(data)
-                logger.trace(  # type: ignore
-                    f"[UniLab Registry] Resource-{current_resource_number} File-{i+1}/{len(files)} "
+                logger.trace(
+                    f"[UniLab Registry] Resource-{current_resource_number} File-{i+1}/{len(results)} "
                     + f"Add {list(data.keys())}"
                 )
                 current_resource_number += 1
-            else:
-                logger.debug(f"[UniLab Registry] Res File-{i+1}/{len(files)} Not Valid YAML File: {file.absolute()}")
+
+        # 记录无效文件
+        valid_files = {r[0] for r in results}
+        for file in files:
+            if file not in valid_files:
+                logger.debug(f"[UniLab Registry] Res File Not Valid YAML File: {file.absolute()}")
 
     def _extract_class_docstrings(self, module_string: str) -> Dict[str, str]:
         """
@@ -674,213 +724,244 @@ class Registry:
                 "handles": {},
             }
 
+    def _load_single_device_file(
+        self, file: Path, complete_registry: bool, get_yaml_from_goal_type
+    ) -> Tuple[Dict[str, Any], Dict[str, Any], bool, List[str]]:
+        """
+        加载单个设备文件 (线程安全)
+
+        Returns:
+            (data, complete_data, is_valid, device_ids): 设备数据, 完整数据, 是否有效, 设备ID列表
+        """
+        try:
+            with open(file, encoding="utf-8", mode="r") as f:
+                data = yaml.safe_load(io.StringIO(f.read()))
+        except Exception as e:
+            logger.warning(f"[UniLab Registry] 读取设备文件失败: {file}, 错误: {e}")
+            return {}, {}, False, []
+
+        if not data:
+            return {}, {}, False, []
+
+        complete_data = {}
+        action_str_type_mapping = {
+            "UniLabJsonCommand": "UniLabJsonCommand",
+            "UniLabJsonCommandAsync": "UniLabJsonCommandAsync",
+        }
+        status_str_type_mapping = {}
+        device_ids = []
+
+        for device_id, device_config in data.items():
+            if "version" not in device_config:
+                device_config["version"] = "1.0.0"
+            if "category" not in device_config:
+                device_config["category"] = [file.stem]
+            elif file.stem not in device_config["category"]:
+                device_config["category"].append(file.stem)
+            if "config_info" not in device_config:
+                device_config["config_info"] = []
+            if "description" not in device_config:
+                device_config["description"] = ""
+            if "icon" not in device_config:
+                device_config["icon"] = ""
+            if "handles" not in device_config:
+                device_config["handles"] = []
+            if "init_param_schema" not in device_config:
+                device_config["init_param_schema"] = {}
+            if "class" in device_config:
+                if "status_types" not in device_config["class"] or device_config["class"]["status_types"] is None:
+                    device_config["class"]["status_types"] = {}
+                if (
+                    "action_value_mappings" not in device_config["class"]
+                    or device_config["class"]["action_value_mappings"] is None
+                ):
+                    device_config["class"]["action_value_mappings"] = {}
+                enhanced_info = {}
+                if complete_registry:
+                    device_config["class"]["status_types"].clear()
+                    enhanced_info = get_enhanced_class_info(device_config["class"]["module"], use_dynamic=True)
+                    if not enhanced_info.get("dynamic_import_success", False):
+                        continue
+                    device_config["class"]["status_types"].update(
+                        {k: v["return_type"] for k, v in enhanced_info["status_methods"].items()}
+                    )
+                for status_name, status_type in device_config["class"]["status_types"].items():
+                    if isinstance(status_type, tuple) or status_type in ["Any", "None", "Unknown"]:
+                        status_type = "String"
+                        device_config["class"]["status_types"][status_name] = status_type
+                    try:
+                        target_type = self._replace_type_with_class(status_type, device_id, f"状态 {status_name}")
+                    except ROSMsgNotFound:
+                        continue
+                    if target_type in [dict, list]:
+                        target_type = String
+                    status_str_type_mapping[status_type] = target_type
+                device_config["class"]["status_types"] = dict(sorted(device_config["class"]["status_types"].items()))
+                if complete_registry:
+                    old_action_configs = {}
+                    for action_name, action_config in device_config["class"]["action_value_mappings"].items():
+                        old_action_configs[action_name] = action_config
+
+                    device_config["class"]["action_value_mappings"] = {
+                        k: v
+                        for k, v in device_config["class"]["action_value_mappings"].items()
+                        if not k.startswith("auto-")
+                    }
+                    device_config["class"]["action_value_mappings"].update(
+                        {
+                            f"auto-{k}": {
+                                "type": "UniLabJsonCommandAsync" if v["is_async"] else "UniLabJsonCommand",
+                                "goal": {},
+                                "feedback": {},
+                                "result": {},
+                                "schema": self._generate_unilab_json_command_schema(
+                                    v["args"],
+                                    k,
+                                    v.get("return_annotation"),
+                                    old_action_configs.get(f"auto-{k}", {}).get("schema"),
+                                ),
+                                "goal_default": {i["name"]: i["default"] for i in v["args"]},
+                                "handles": old_action_configs.get(f"auto-{k}", {}).get("handles", []),
+                                "placeholder_keys": {
+                                    i["name"]: (
+                                        "unilabos_resources"
+                                        if i["type"] == "unilabos.registry.placeholder_type:ResourceSlot"
+                                        or i["type"] == ("list", "unilabos.registry.placeholder_type:ResourceSlot")
+                                        else "unilabos_devices"
+                                    )
+                                    for i in v["args"]
+                                    if i.get("type", "")
+                                    in [
+                                        "unilabos.registry.placeholder_type:ResourceSlot",
+                                        "unilabos.registry.placeholder_type:DeviceSlot",
+                                        ("list", "unilabos.registry.placeholder_type:ResourceSlot"),
+                                        ("list", "unilabos.registry.placeholder_type:DeviceSlot"),
+                                    ]
+                                },
+                            }
+                            for k, v in enhanced_info["action_methods"].items()
+                            if k not in device_config["class"]["action_value_mappings"]
+                        }
+                    )
+                    for action_name, old_config in old_action_configs.items():
+                        if action_name in device_config["class"]["action_value_mappings"]:
+                            old_schema = old_config.get("schema", {})
+                            if "description" in old_schema and old_schema["description"]:
+                                device_config["class"]["action_value_mappings"][action_name]["schema"][
+                                    "description"
+                                ] = old_schema["description"]
+                    device_config["init_param_schema"] = {}
+                    device_config["init_param_schema"]["config"] = self._generate_unilab_json_command_schema(
+                        enhanced_info["init_params"], "__init__"
+                    )["properties"]["goal"]
+                    device_config["init_param_schema"]["data"] = self._generate_status_types_schema(
+                        enhanced_info["status_methods"]
+                    )
+
+                device_config.pop("schema", None)
+                device_config["class"]["action_value_mappings"] = dict(
+                    sorted(device_config["class"]["action_value_mappings"].items())
+                )
+                for action_name, action_config in device_config["class"]["action_value_mappings"].items():
+                    if "handles" not in action_config:
+                        action_config["handles"] = {}
+                    elif isinstance(action_config["handles"], list):
+                        if len(action_config["handles"]):
+                            logger.error(f"设备{device_id} {action_name} 的handles配置错误，应该是字典类型")
+                            continue
+                        else:
+                            action_config["handles"] = {}
+                    if "type" in action_config:
+                        action_type_str: str = action_config["type"]
+                        if not action_type_str.startswith("UniLabJsonCommand"):
+                            try:
+                                target_type = self._replace_type_with_class(
+                                    action_type_str, device_id, f"动作 {action_name}"
+                                )
+                            except ROSMsgNotFound:
+                                continue
+                            action_str_type_mapping[action_type_str] = target_type
+                            if target_type is not None:
+                                action_config["goal_default"] = yaml.safe_load(
+                                    io.StringIO(get_yaml_from_goal_type(target_type.Goal))
+                                )
+                                action_config["schema"] = ros_action_to_json_schema(target_type)
+                            else:
+                                logger.warning(
+                                    f"[UniLab Registry] 设备 {device_id} 的动作 {action_name} 类型为空，跳过替换"
+                                )
+                complete_data[device_id] = copy.deepcopy(dict(sorted(device_config.items())))
+                for status_name, status_type in device_config["class"]["status_types"].items():
+                    device_config["class"]["status_types"][status_name] = status_str_type_mapping[status_type]
+                for action_name, action_config in device_config["class"]["action_value_mappings"].items():
+                    if action_config["type"] not in action_str_type_mapping:
+                        continue
+                    action_config["type"] = action_str_type_mapping[action_config["type"]]
+                self._add_builtin_actions(device_config, device_id)
+            device_config["file_path"] = str(file.absolute()).replace("\\", "/")
+            device_config["registry_type"] = "device"
+            device_ids.append(device_id)
+
+        complete_data = dict(sorted(complete_data.items()))
+        complete_data = copy.deepcopy(complete_data)
+        try:
+            with open(file, "w", encoding="utf-8") as f:
+                yaml.dump(complete_data, f, allow_unicode=True, default_flow_style=False, Dumper=NoAliasDumper)
+        except Exception as e:
+            logger.warning(f"[UniLab Registry] 写入设备文件失败: {file}, 错误: {e}")
+
+        return data, complete_data, True, device_ids
+
     def load_device_types(self, path: os.PathLike, complete_registry: bool):
-        # return
         abs_path = Path(path).absolute()
         devices_path = abs_path / "devices"
         device_comms_path = abs_path / "device_comms"
         files = list(devices_path.glob("*.yaml")) + list(device_comms_path.glob("*.yaml"))
-        logger.trace(  # type: ignore
+        logger.trace(
             f"[UniLab Registry] devices: {devices_path.exists()}, device_comms: {device_comms_path.exists()}, "
             + f"total: {len(files)}"
         )
-        current_device_number = len(self.device_type_registry) + 1
+
+        if not files:
+            return
+
         from unilabos.app.web.utils.action_utils import get_yaml_from_goal_type
 
-        for i, file in enumerate(files):
-            with open(file, encoding="utf-8", mode="r") as f:
-                data = yaml.safe_load(io.StringIO(f.read()))
-            complete_data = {}
-            action_str_type_mapping = {
-                "UniLabJsonCommand": "UniLabJsonCommand",
-                "UniLabJsonCommandAsync": "UniLabJsonCommandAsync",
+        # 使用线程池并行加载
+        max_workers = min(8, len(files))
+        results = []
+
+        with ThreadPoolExecutor(max_workers=max_workers) as executor:
+            future_to_file = {
+                executor.submit(self._load_single_device_file, file, complete_registry, get_yaml_from_goal_type): file
+                for file in files
             }
-            status_str_type_mapping = {}
-            if data:
-                # 在添加到注册表前处理类型替换
-                for device_id, device_config in data.items():
-                    # 添加文件路径信息 - 使用规范化的完整文件路径
-                    if "version" not in device_config:
-                        device_config["version"] = "1.0.0"
-                    if "category" not in device_config:
-                        device_config["category"] = [file.stem]
-                    elif file.stem not in device_config["category"]:
-                        device_config["category"].append(file.stem)
-                    if "config_info" not in device_config:
-                        device_config["config_info"] = []
-                    if "description" not in device_config:
-                        device_config["description"] = ""
-                    if "icon" not in device_config:
-                        device_config["icon"] = ""
-                    if "handles" not in device_config:
-                        device_config["handles"] = []
-                    if "init_param_schema" not in device_config:
-                        device_config["init_param_schema"] = {}
-                    if "class" in device_config:
-                        if (
-                            "status_types" not in device_config["class"]
-                            or device_config["class"]["status_types"] is None
-                        ):
-                            device_config["class"]["status_types"] = {}
-                        if (
-                            "action_value_mappings" not in device_config["class"]
-                            or device_config["class"]["action_value_mappings"] is None
-                        ):
-                            device_config["class"]["action_value_mappings"] = {}
-                        enhanced_info = {}
-                        if complete_registry:
-                            device_config["class"]["status_types"].clear()
-                            enhanced_info = get_enhanced_class_info(device_config["class"]["module"], use_dynamic=True)
-                            if not enhanced_info.get("dynamic_import_success", False):
-                                continue
-                            device_config["class"]["status_types"].update(
-                                {k: v["return_type"] for k, v in enhanced_info["status_methods"].items()}
-                            )
-                        for status_name, status_type in device_config["class"]["status_types"].items():
-                            if isinstance(status_type, tuple) or status_type in ["Any", "None", "Unknown"]:
-                                status_type = "String"  # 替换成ROS的String，便于显示
-                                device_config["class"]["status_types"][status_name] = status_type
-                            try:
-                                target_type = self._replace_type_with_class(
-                                    status_type, device_id, f"状态 {status_name}"
-                                )
-                            except ROSMsgNotFound:
-                                continue
-                            if target_type in [
-                                dict,
-                                list,
-                            ]:  # 对于嵌套类型返回的对象，暂时处理成字符串，无法直接进行转换
-                                target_type = String
-                            status_str_type_mapping[status_type] = target_type
-                        device_config["class"]["status_types"] = dict(
-                            sorted(device_config["class"]["status_types"].items())
-                        )
-                        if complete_registry:
-                            # 保存原有的 action 配置（用于保留 schema 的 description 和 handles 等）
-                            old_action_configs = {}
-                            for action_name, action_config in device_config["class"]["action_value_mappings"].items():
-                                old_action_configs[action_name] = action_config
+            for future in as_completed(future_to_file):
+                file = future_to_file[future]
+                try:
+                    data, complete_data, is_valid, device_ids = future.result()
+                    if is_valid:
+                        results.append((file, data, device_ids))
+                except Exception as e:
+                    logger.warning(f"[UniLab Registry] 处理设备文件异常: {file}, 错误: {e}")
 
-                            device_config["class"]["action_value_mappings"] = {
-                                k: v
-                                for k, v in device_config["class"]["action_value_mappings"].items()
-                                if not k.startswith("auto-")
-                            }
-                            # 处理动作值映射
-                            device_config["class"]["action_value_mappings"].update(
-                                {
-                                    f"auto-{k}": {
-                                        "type": "UniLabJsonCommandAsync" if v["is_async"] else "UniLabJsonCommand",
-                                        "goal": {},
-                                        "feedback": {},
-                                        "result": {},
-                                        "schema": self._generate_unilab_json_command_schema(
-                                            v["args"],
-                                            k,
-                                            v.get("return_annotation"),
-                                            # 传入旧的 schema 以保留字段 description
-                                            old_action_configs.get(f"auto-{k}", {}).get("schema"),
-                                        ),
-                                        "goal_default": {i["name"]: i["default"] for i in v["args"]},
-                                        # 保留原有的 handles 配置
-                                        "handles": old_action_configs.get(f"auto-{k}", {}).get("handles", []),
-                                        "placeholder_keys": {
-                                            i["name"]: (
-                                                "unilabos_resources"
-                                                if i["type"] == "unilabos.registry.placeholder_type:ResourceSlot"
-                                                or i["type"]
-                                                == ("list", "unilabos.registry.placeholder_type:ResourceSlot")
-                                                else "unilabos_devices"
-                                            )
-                                            for i in v["args"]
-                                            if i.get("type", "")
-                                            in [
-                                                "unilabos.registry.placeholder_type:ResourceSlot",
-                                                "unilabos.registry.placeholder_type:DeviceSlot",
-                                                ("list", "unilabos.registry.placeholder_type:ResourceSlot"),
-                                                ("list", "unilabos.registry.placeholder_type:DeviceSlot"),
-                                            ]
-                                        },
-                                    }
-                                    # 不生成已配置action的动作
-                                    for k, v in enhanced_info["action_methods"].items()
-                                    if k not in device_config["class"]["action_value_mappings"]
-                                }
-                            )
-                            # 恢复原有的 description 信息（非 auto- 开头的动作）
-                            for action_name, old_config in old_action_configs.items():
-                                if action_name in device_config["class"]["action_value_mappings"]:  # 有一些会被删除
-                                    old_schema = old_config.get("schema", {})
-                                    if "description" in old_schema and old_schema["description"]:
-                                        device_config["class"]["action_value_mappings"][action_name]["schema"][
-                                            "description"
-                                        ] = old_schema["description"]
-                            device_config["init_param_schema"] = {}
-                            device_config["init_param_schema"]["config"] = self._generate_unilab_json_command_schema(
-                                enhanced_info["init_params"], "__init__"
-                            )["properties"]["goal"]
-                            device_config["init_param_schema"]["data"] = self._generate_status_types_schema(
-                                enhanced_info["status_methods"]
-                            )
-
-                        device_config.pop("schema", None)
-                        device_config["class"]["action_value_mappings"] = dict(
-                            sorted(device_config["class"]["action_value_mappings"].items())
-                        )
-                        for action_name, action_config in device_config["class"]["action_value_mappings"].items():
-                            if "handles" not in action_config:
-                                action_config["handles"] = {}
-                            elif isinstance(action_config["handles"], list):
-                                if len(action_config["handles"]):
-                                    logger.error(f"设备{device_id} {action_name} 的handles配置错误，应该是字典类型")
-                                    continue
-                                else:
-                                    action_config["handles"] = {}
-                            if "type" in action_config:
-                                action_type_str: str = action_config["type"]
-                                # 通过Json发放指令，而不是通过特殊的ros action进行处理
-                                if not action_type_str.startswith("UniLabJsonCommand"):
-                                    try:
-                                        target_type = self._replace_type_with_class(
-                                            action_type_str, device_id, f"动作 {action_name}"
-                                        )
-                                    except ROSMsgNotFound:
-                                        continue
-                                    action_str_type_mapping[action_type_str] = target_type
-                                    if target_type is not None:
-                                        action_config["goal_default"] = yaml.safe_load(
-                                            io.StringIO(get_yaml_from_goal_type(target_type.Goal))
-                                        )
-                                        action_config["schema"] = ros_action_to_json_schema(target_type)
-                                    else:
-                                        logger.warning(
-                                            f"[UniLab Registry] 设备 {device_id} 的动作 {action_name} 类型为空，跳过替换"
-                                        )
-                        complete_data[device_id] = copy.deepcopy(dict(sorted(device_config.items())))  # 稍后dump到文件
-                        for status_name, status_type in device_config["class"]["status_types"].items():
-                            device_config["class"]["status_types"][status_name] = status_str_type_mapping[status_type]
-                        for action_name, action_config in device_config["class"]["action_value_mappings"].items():
-                            if action_config["type"] not in action_str_type_mapping:
-                                continue
-                            action_config["type"] = action_str_type_mapping[action_config["type"]]
-                        # 添加内置的驱动命令动作
-                        self._add_builtin_actions(device_config, device_id)
-                    device_config["file_path"] = str(file.absolute()).replace("\\", "/")
-                    device_config["registry_type"] = "device"
-                    logger.trace(  # type: ignore
-                        f"[UniLab Registry] Device-{current_device_number} File-{i+1}/{len(files)} Add {device_id} "
+        # 线程安全地更新注册表
+        current_device_number = len(self.device_type_registry) + 1
+        with self._registry_lock:
+            for file, data, device_ids in results:
+                self.device_type_registry.update(data)
+                for device_id in device_ids:
+                    logger.trace(
+                        f"[UniLab Registry] Device-{current_device_number} Add {device_id} "
                         + f"[{data[device_id].get('name', '未命名设备')}]"
                     )
                     current_device_number += 1
-                complete_data = dict(sorted(complete_data.items()))
-                complete_data = copy.deepcopy(complete_data)
-                with open(file, "w", encoding="utf-8") as f:
-                    yaml.dump(complete_data, f, allow_unicode=True, default_flow_style=False, Dumper=NoAliasDumper)
-                self.device_type_registry.update(data)
-            else:
-                logger.debug(
-                    f"[UniLab Registry] Device File-{i+1}/{len(files)} Not Valid YAML File: {file.absolute()}"
-                )
+
+        # 记录无效文件
+        valid_files = {r[0] for r in results}
+        for file in files:
+            if file not in valid_files:
+                logger.debug(f"[UniLab Registry] Device File Not Valid YAML File: {file.absolute()}")
 
     def obtain_registry_device_info(self):
         devices = []

unilabos/resources/graphio.py

@@ -42,7 +42,7 @@ def canonicalize_nodes_data(
     Returns:
         ResourceTreeSet: 标准化后的资源树集合
     """
-    print_status(f"{len(nodes)} Resources loaded:", "info")
+    print_status(f"{len(nodes)} Resources loaded", "info")
 
     # 第一步：基本预处理（处理graphml的label字段）
     outer_host_node_id = None

unilabos/resources/resource_tracker.py

@@ -69,8 +69,8 @@ class ResourceDict(BaseModel):
     klass: str = Field(alias="class", description="Resource class name")
     pose: ResourceDictPosition = Field(description="Resource position", default_factory=ResourceDictPosition)
     config: Dict[str, Any] = Field(description="Resource configuration")
-    data: Dict[str, Any] = Field(description="Resource data")
-    extra: Dict[str, Any] = Field(description="Extra data")
+    data: Dict[str, Any] = Field(description="Resource data, eg: container liquid data")
+    extra: Dict[str, Any] = Field(description="Extra data, eg: slot index")
 
     @field_serializer("parent_uuid")
     def _serialize_parent(self, parent_uuid: Optional["ResourceDict"]):

unilabos/ros/nodes/base_device_node.py

@@ -1581,7 +1581,7 @@ class BaseROS2DeviceNode(Node, Generic[T]):
                                     f"转换ResourceSlot列表参数 {arg_name} 失败: {e}\n{traceback.format_exc()}"
                                 )
                                 raise JsonCommandInitError(f"ResourceSlot列表参数转换失败: {arg_name}")
-
+            # todo: 默认反报送
             return function(**function_args)
         except KeyError as ex:
             raise JsonCommandInitError(
@@ -1614,8 +1614,8 @@ class BaseROS2DeviceNode(Node, Generic[T]):
         timeout = 30.0
         elapsed = 0.0
         while not future.done() and elapsed < timeout:
-            time.sleep(0.05)
-            elapsed += 0.05
+            time.sleep(0.02)
+            elapsed += 0.02
 
         if not future.done():
             raise Exception(f"资源查询超时: {uuids_list}")

unilabos/ros/nodes/presets/host_node.py

@@ -807,7 +807,7 @@ class HostNode(BaseROS2DeviceNode):
         assign_sample_id(action_kwargs)
         goal_msg = convert_to_ros_msg(action_client._action_type.Goal(), action_kwargs)
 
-        self.lab_logger().info(f"[Host Node] Sending goal for {action_id}: {str(goal_msg)[:1000]}")
+        # self.lab_logger().trace(f"[Host Node] Sending goal for {action_id}: {str(goal_msg)[:1000]}")
         self.lab_logger().trace(f"[Host Node] Sending goal for {action_id}: {action_kwargs}")
         self.lab_logger().trace(f"[Host Node] Sending goal for {action_id}: {goal_msg}")
         action_client.wait_for_server()
@@ -1180,7 +1180,7 @@ class HostNode(BaseROS2DeviceNode):
         """
         更新节点信息回调
         """
-        # self.lab_logger().info(f"[Host Node] Node info update request received: {request}")
+        self.lab_logger().trace(f"[Host Node] Node info update request received: {request}")
         try:
             from unilabos.app.communication import get_communication_client
             from unilabos.app.web.client import HTTPClient, http_client

unilabos/test/experiments/prcxi_9320_slim.json

@@ -0,0 +1,795 @@
+{
+  "nodes": [
+    {
+      "id": "PRCXI",
+      "name": "PRCXI",
+      "type": "device",
+      "class": "liquid_handler.prcxi",
+      "parent": "",
+      "pose": {
+        "size": {
+          "width": 562,
+          "height": 394,
+          "depth": 0
+        }
+      },
+      "config": {
+        "axis": "Left",
+        "deck": {
+          "_resource_type": "unilabos.devices.liquid_handling.prcxi.prcxi:PRCXI9300Deck",
+          "_resource_child_name": "PRCXI_Deck"
+        },
+        "host": "10.20.30.184",
+        "port": 9999,
+        "debug": true,
+        "setup": true,
+        "is_9320": true,
+        "timeout": 10,
+        "matrix_id": "5de524d0-3f95-406c-86dd-f83626ebc7cb",
+        "simulator": true,
+        "channel_num": 2
+      },
+      "data": {
+        "reset_ok": true
+      },
+      "schema": {},
+      "description": "",
+      "model": null,
+      "position": {
+        "x": 0,
+        "y": 240,
+        "z": 0
+      }
+    },
+    {
+      "id": "PRCXI_Deck",
+      "name": "PRCXI_Deck",
+
+      "children": [],
+      "parent": "PRCXI",
+      "type": "deck",
+      "class": "",
+      "position": {
+        "x": 10,
+        "y": 10,
+        "z": 0
+      },
+      "config": {
+        "type": "PRCXI9300Deck",
+        "size_x": 542,
+        "size_y": 374,
+        "size_z": 0,
+        "rotation": {
+          "x": 0,
+          "y": 0,
+          "z": 0,
+          "type": "Rotation"
+        },
+        "category": "deck",
+        "barcode": null
+      },
+      "data": {}
+    },
+    {
+      "id": "T1",
+      "name": "T1",
+      "children": [],
+      "parent": "PRCXI_Deck",
+      "type": "plate",
+      "class": "",
+      "position": {
+        "x": 0,
+        "y": 288,
+        "z": 0
+      },
+      "config": {
+        "type": "PRCXI9300Container",
+        "size_x": 127,
+        "size_y": 85.5,
+        "size_z": 10,
+        "rotation": {
+          "x": 0,
+          "y": 0,
+          "z": 0,
+          "type": "Rotation"
+        },
+        "category": "plate",
+        "model": null,
+        "barcode": null,
+        "ordering": {},
+        "sites": [
+          {
+            "label": "T1",
+            "visible": true,
+            "position": { "x": 0, "y": 0, "z": 0 },
+            "size": { "width": 128.0, "height": 86, "depth": 0 },
+            "content_type": [
+              "plate",
+              "tip_rack",
+              "plates",
+              "tip_racks",
+              "tube_rack"
+            ]
+          }
+        ]
+      },
+      "data": {}
+    },
+    {
+      "id": "T2",
+      "name": "T2",
+      "children": [],
+      "parent": "PRCXI_Deck",
+      "type": "plate",
+      "class": "",
+      "position": {
+        "x": 138,
+        "y": 288,
+        "z": 0
+      },
+      "config": {
+        "type": "PRCXI9300Container",
+        "size_x": 127,
+        "size_y": 85.5,
+        "size_z": 10,
+        "rotation": {
+          "x": 0,
+          "y": 0,
+          "z": 0,
+          "type": "Rotation"
+        },
+        "category": "plate",
+        "model": null,
+        "barcode": null,
+        "ordering": {},
+        "sites": [
+          {
+            "label": "T2",
+            "visible": true,
+            "position": { "x": 0, "y": 0, "z": 0 },
+            "size": { "width": 128.0, "height": 86, "depth": 0 },
+            "content_type": [
+              "plate",
+              "tip_rack",
+              "plates",
+              "tip_racks",
+              "tube_rack"
+            ]
+          }
+        ]
+      },
+      "data": {}
+    },
+    {
+      "id": "T3",
+      "name": "T3",
+      "children": [],
+      "parent": "PRCXI_Deck",
+      "type": "plate",
+      "class": "",
+      "position": {
+        "x": 276,
+        "y": 288,
+        "z": 0
+      },
+      "config": {
+        "type": "PRCXI9300Container",
+        "size_x": 127,
+        "size_y": 85.5,
+        "size_z": 10,
+        "rotation": {
+          "x": 0,
+          "y": 0,
+          "z": 0,
+          "type": "Rotation"
+        },
+        "category": "plate",
+        "model": null,
+        "barcode": null,
+        "ordering": {},
+        "sites": [
+          {
+            "label": "T3",
+            "visible": true,
+            "position": { "x": 0, "y": 0, "z": 0 },
+            "size": { "width": 128.0, "height": 86, "depth": 0 },
+            "content_type": [
+              "plate",
+              "tip_rack",
+              "plates",
+              "tip_racks",
+              "tube_rack"
+            ]
+          }
+        ]
+      },
+      "data": {}
+    },
+    {
+      "id": "T4",
+      "name": "T4",
+      "children": [],
+      "parent": "PRCXI_Deck",
+      "type": "plate",
+      "class": "",
+      "position": {
+        "x": 414,
+        "y": 288,
+        "z": 0
+      },
+      "config": {
+        "type": "PRCXI9300Container",
+        "size_x": 127,
+        "size_y": 85.5,
+        "size_z": 10,
+        "rotation": {
+          "x": 0,
+          "y": 0,
+          "z": 0,
+          "type": "Rotation"
+        },
+        "category": "plate",
+        "model": null,
+        "barcode": null,
+        "ordering": {},
+        "sites": [
+          {
+            "label": "T4",
+            "visible": true,
+            "position": { "x": 0, "y": 0, "z": 0 },
+            "size": { "width": 128.0, "height": 86, "depth": 0 },
+            "content_type": [
+              "plate",
+              "tip_rack",
+              "plates",
+              "tip_racks",
+              "tube_rack"
+            ]
+          }
+        ]
+      },
+      "data": {}
+    },
+    {
+      "id": "T5",
+      "name": "T5",
+      "children": [],
+      "parent": "PRCXI_Deck",
+      "type": "plate",
+      "class": "",
+      "position": {
+        "x": 0,
+        "y": 192,
+        "z": 0
+      },
+      "config": {
+        "type": "PRCXI9300Container",
+        "size_x": 127,
+        "size_y": 85.5,
+        "size_z": 10,
+        "rotation": {
+          "x": 0,
+          "y": 0,
+          "z": 0,
+          "type": "Rotation"
+        },
+        "category": "plate",
+        "model": null,
+        "barcode": null,
+        "ordering": {},
+        "sites": [
+          {
+            "label": "T5",
+            "visible": true,
+            "position": { "x": 0, "y": 0, "z": 0 },
+            "size": { "width": 128.0, "height": 86, "depth": 0 },
+            "content_type": [
+              "plate",
+              "tip_rack",
+              "plates",
+              "tip_racks",
+              "tube_rack"
+            ]
+          }
+        ]
+      },
+      "data": {}
+    },
+    {
+      "id": "T6",
+      "name": "T6",
+      "children": [],
+      "parent": "PRCXI_Deck",
+      "type": "plate",
+      "class": "",
+      "position": {
+        "x": 138,
+        "y": 192,
+        "z": 0
+      },
+      "config": {
+        "type": "PRCXI9300Container",
+        "size_x": 127,
+        "size_y": 85.5,
+        "size_z": 10,
+        "rotation": {
+          "x": 0,
+          "y": 0,
+          "z": 0,
+          "type": "Rotation"
+        },
+        "category": "plate",
+        "model": null,
+        "barcode": null,
+        "ordering": {},
+        "sites": [
+          {
+            "label": "T6",
+            "visible": true,
+            "position": { "x": 0, "y": 0, "z": 0 },
+            "size": { "width": 128.0, "height": 86, "depth": 0 },
+            "content_type": [
+              "plate",
+              "tip_rack",
+              "plates",
+              "tip_racks",
+              "tube_rack"
+            ]
+          }
+        ]
+      },
+      "data": {}
+    },
+    {
+      "id": "T7",
+      "name": "T7",
+      "children": [],
+      "parent": "PRCXI_Deck",
+      "type": "plate",
+      "class": "",
+      "position": {
+        "x": 276,
+        "y": 192,
+        "z": 0
+      },
+      "config": {
+        "type": "PRCXI9300Container",
+        "size_x": 127,
+        "size_y": 85.5,
+        "size_z": 10,
+        "rotation": {
+          "x": 0,
+          "y": 0,
+          "z": 0,
+          "type": "Rotation"
+        },
+        "category": "plate",
+        "model": null,
+        "barcode": null,
+        "ordering": {},
+        "sites": [
+          {
+            "label": "T7",
+            "visible": true,
+            "position": { "x": 0, "y": 0, "z": 0 },
+            "size": { "width": 128.0, "height": 86, "depth": 0 },
+            "content_type": [
+              "plate",
+              "tip_rack",
+              "plates",
+              "tip_racks",
+              "tube_rack"
+            ]
+          }
+        ]
+      },
+      "data": {}
+    },
+    {
+      "id": "T8",
+      "name": "T8",
+      "children": [],
+      "parent": "PRCXI_Deck",
+      "type": "plate",
+      "class": "",
+      "position": {
+        "x": 414,
+        "y": 192,
+        "z": 0
+      },
+      "config": {
+        "type": "PRCXI9300Container",
+        "size_x": 127,
+        "size_y": 85.5,
+        "size_z": 10,
+        "rotation": {
+          "x": 0,
+          "y": 0,
+          "z": 0,
+          "type": "Rotation"
+        },
+        "category": "plate",
+        "model": null,
+        "barcode": null,
+        "ordering": {},
+        "sites": [
+          {
+            "label": "T8",
+            "visible": true,
+            "position": { "x": 0, "y": 0, "z": 0 },
+            "size": { "width": 128.0, "height": 86, "depth": 0 },
+            "content_type": [
+              "plate",
+              "tip_rack",
+              "plates",
+              "tip_racks",
+              "tube_rack"
+            ]
+          }
+        ]
+      },
+      "data": {}
+    },
+    {
+      "id": "T9",
+      "name": "T9",
+      "children": [],
+      "parent": "PRCXI_Deck",
+      "type": "plate",
+      "class": "",
+      "position": {
+        "x": 0,
+        "y": 96,
+        "z": 0
+      },
+      "config": {
+        "type": "PRCXI9300Container",
+        "size_x": 127,
+        "size_y": 85.5,
+        "size_z": 10,
+        "rotation": {
+          "x": 0,
+          "y": 0,
+          "z": 0,
+          "type": "Rotation"
+        },
+        "category": "plate",
+        "model": null,
+        "barcode": null,
+        "ordering": {},
+        "sites": [
+          {
+            "label": "T9",
+            "visible": true,
+            "position": { "x": 0, "y": 0, "z": 0 },
+            "size": { "width": 128.0, "height": 86, "depth": 0 },
+            "content_type": [
+              "plate",
+              "tip_rack",
+              "plates",
+              "tip_racks",
+              "tube_rack"
+            ]
+          }
+        ]
+      },
+      "data": {}
+    },
+    {
+      "id": "T10",
+      "name": "T10",
+      "children": [],
+      "parent": "PRCXI_Deck",
+      "type": "plate",
+      "class": "",
+      "position": {
+        "x": 138,
+        "y": 96,
+        "z": 0
+      },
+      "config": {
+        "type": "PRCXI9300Container",
+        "size_x": 127,
+        "size_y": 85.5,
+        "size_z": 10,
+        "rotation": {
+          "x": 0,
+          "y": 0,
+          "z": 0,
+          "type": "Rotation"
+        },
+        "category": "plate",
+        "model": null,
+        "barcode": null,
+        "ordering": {},
+        "sites": [
+          {
+            "label": "T10",
+            "visible": true,
+            "position": { "x": 0, "y": 0, "z": 0 },
+            "size": { "width": 128.0, "height": 86, "depth": 0 },
+            "content_type": [
+              "plate",
+              "tip_rack",
+              "plates",
+              "tip_racks",
+              "tube_rack"
+            ]
+          }
+        ]
+      },
+      "data": {}
+    },
+    {
+      "id": "T11",
+      "name": "T11",
+      "children": [],
+      "parent": "PRCXI_Deck",
+      "type": "plate",
+      "class": "",
+      "position": {
+        "x": 276,
+        "y": 96,
+        "z": 0
+      },
+      "config": {
+        "type": "PRCXI9300Container",
+        "size_x": 127,
+        "size_y": 85.5,
+        "size_z": 10,
+        "rotation": {
+          "x": 0,
+          "y": 0,
+          "z": 0,
+          "type": "Rotation"
+        },
+        "category": "plate",
+        "model": null,
+        "barcode": null,
+        "ordering": {},
+        "sites": [
+          {
+            "label": "T11",
+            "visible": true,
+            "position": { "x": 0, "y": 0, "z": 0 },
+            "size": { "width": 128.0, "height": 86, "depth": 0 },
+            "content_type": [
+              "plate",
+              "tip_rack",
+              "plates",
+              "tip_racks",
+              "tube_rack"
+            ]
+          }
+        ]
+      },
+      "data": {}
+    },
+    {
+      "id": "T12",
+      "name": "T12",
+      "children": [],
+      "parent": "PRCXI_Deck",
+      "type": "plate",
+      "class": "",
+      "position": {
+        "x": 414,
+        "y": 96,
+        "z": 0
+      },
+      "config": {
+        "type": "PRCXI9300Container",
+        "size_x": 127,
+        "size_y": 85.5,
+        "size_z": 10,
+        "rotation": {
+          "x": 0,
+          "y": 0,
+          "z": 0,
+          "type": "Rotation"
+        },
+        "category": "plate",
+        "model": null,
+        "barcode": null,
+        "ordering": {},
+        "sites": [
+          {
+            "label": "T12",
+            "visible": true,
+            "position": { "x": 0, "y": 0, "z": 0 },
+            "size": { "width": 128.0, "height": 86, "depth": 0 },
+            "content_type": [
+              "plate",
+              "tip_rack",
+              "plates",
+              "tip_racks",
+              "tube_rack"
+            ]
+          }
+        ]
+      },
+      "data": {}
+    },
+    {
+      "id": "T13",
+      "name": "T13",
+      "children": [],
+      "parent": "PRCXI_Deck",
+      "type": "plate",
+      "class": "",
+      "position": {
+        "x": 0,
+        "y": 0,
+        "z": 0
+      },
+      "config": {
+        "type": "PRCXI9300Container",
+        "size_x": 127,
+        "size_y": 85.5,
+        "size_z": 10,
+        "rotation": {
+          "x": 0,
+          "y": 0,
+          "z": 0,
+          "type": "Rotation"
+        },
+        "category": "plate",
+        "model": null,
+        "barcode": null,
+        "ordering": {},
+        "sites": [
+          {
+            "label": "T13",
+            "visible": true,
+            "position": { "x": 0, "y": 0, "z": 0 },
+            "size": { "width": 128.0, "height": 86, "depth": 0 },
+            "content_type": [
+              "plate",
+              "tip_rack",
+              "plates",
+              "tip_racks",
+              "tube_rack"
+            ]
+          }
+        ]
+      },
+      "data": {}
+    },
+    {
+      "id": "T14",
+      "name": "T14",
+      "children": [],
+      "parent": "PRCXI_Deck",
+      "type": "plate",
+      "class": "",
+      "position": {
+        "x": 138,
+        "y": 0,
+        "z": 0
+      },
+      "config": {
+        "type": "PRCXI9300Container",
+        "size_x": 127,
+        "size_y": 85.5,
+        "size_z": 10,
+        "rotation": {
+          "x": 0,
+          "y": 0,
+          "z": 0,
+          "type": "Rotation"
+        },
+        "category": "plate",
+        "model": null,
+        "barcode": null,
+        "ordering": {},
+        "sites": [
+          {
+            "label": "T14",
+            "visible": true,
+            "position": { "x": 0, "y": 0, "z": 0 },
+            "size": { "width": 128.0, "height": 86, "depth": 0 },
+            "content_type": [
+              "plate",
+              "tip_rack",
+              "plates",
+              "tip_racks",
+              "tube_rack"
+            ]
+          }
+        ]
+      },
+      "data": {}
+    },
+    {
+      "id": "T15",
+      "name": "T15",
+      "children": [],
+      "parent": "PRCXI_Deck",
+      "type": "plate",
+      "class": "",
+      "position": {
+        "x": 276,
+        "y": 0,
+        "z": 0
+      },
+      "config": {
+        "type": "PRCXI9300Container",
+        "size_x": 127,
+        "size_y": 85.5,
+        "size_z": 10,
+        "rotation": {
+          "x": 0,
+          "y": 0,
+          "z": 0,
+          "type": "Rotation"
+        },
+        "category": "plate",
+        "model": null,
+        "barcode": null,
+        "ordering": {},
+        "sites": [
+          {
+            "label": "T15",
+            "visible": true,
+            "position": { "x": 0, "y": 0, "z": 0 },
+            "size": { "width": 128.0, "height": 86, "depth": 0 },
+            "content_type": [
+              "plate",
+              "tip_rack",
+              "plates",
+              "tip_racks",
+              "tube_rack"
+            ]
+          }
+        ]
+      },
+      "data": {}
+    },
+    {
+      "id": "T16",
+      "name": "T16",
+      "children": [],
+      "parent": "PRCXI_Deck",
+      "type": "plate",
+      "class": "",
+      "position": {
+        "x": 414,
+        "y": 0,
+        "z": 0
+      },
+      "config": {
+        "type": "PRCXI9300Container",
+        "size_x": 127,
+        "size_y": 85.5,
+        "size_z": 10,
+        "rotation": {
+          "x": 0,
+          "y": 0,
+          "z": 0,
+          "type": "Rotation"
+        },
+        "category": "plate",
+        "model": null,
+        "barcode": null,
+        "ordering": {},
+        "sites": [
+          {
+            "label": "T16",
+            "visible": true,
+            "position": { "x": 0, "y": 0, "z": 0 },
+            "size": { "width": 128.0, "height": 86, "depth": 0 },
+            "content_type": [
+              "plate",
+              "tip_rack",
+              "plates",
+              "tip_racks",
+              "tube_rack"
+            ]
+          }
+        ]
+      },
+      "data": {}
+    }
+  ],
+  "edges": []
+}

unilabos/workflow/common.py

@@ -19,7 +19,9 @@
 
 第一步: 按 slot 去重创建 create_resource 节点（创建板子）
 --------------------------------------------------------------------------------
+- 首先创建一个 Group 节点（type="Group", minimized=true），用于包含所有 create_resource 节点
 - 遍历所有 reagent，按 slot 去重，为每个唯一的 slot 创建一个板子
+- 所有 create_resource 节点的 parent_uuid 指向 Group 节点，minimized=true
 - 生成参数:
     res_id: plate_slot_{slot}
     device_id: /PRCXI
@@ -29,11 +31,13 @@
 - 输出端口: labware（用于连接 set_liquid_from_plate）
 - 控制流: create_resource 之间通过 ready 端口串联
 
-示例: slot=1, slot=4 -> 创建 2 个 create_resource 节点
+示例: slot=1, slot=4 -> 创建 1 个 Group + 2 个 create_resource 节点
 
 第二步: 为每个 reagent 创建 set_liquid_from_plate 节点（设置液体）
 --------------------------------------------------------------------------------
+- 首先创建一个 Group 节点（type="Group", minimized=true），用于包含所有 set_liquid_from_plate 节点
 - 遍历所有 reagent，为每个试剂创建 set_liquid_from_plate 节点
+- 所有 set_liquid_from_plate 节点的 parent_uuid 指向 Group 节点，minimized=true
 - 生成参数:
     plate: []（通过连接传递，来自 create_resource 的 labware）
     well_names: ["A1", "A3", "A5"]（来自 reagent 的 well 数组）
@@ -76,6 +80,13 @@ transfer_liquid:
     输入: sources -> sources_identifier, targets -> targets_identifier
     输出: sources -> sources_out, targets -> targets_out
 
+==================== 设备名配置 (device_name) ====================
+
+每个节点都有 device_name 字段，指定在哪个设备上执行:
+- create_resource: device_name = "host_node"（固定）
+- set_liquid_from_plate: device_name = "PRCXI"（可配置，见 DEVICE_NAME_DEFAULT）
+- transfer_liquid 等动作: device_name = "PRCXI"（可配置，见 DEVICE_NAME_DEFAULT）
+
 ==================== 校验规则 ====================
 
 - 检查 sources/targets 是否在 reagent 中定义
@@ -97,6 +108,13 @@ Json = Dict[str, Any]
 
 # ==================== 默认配置 ====================
 
+# 设备名配置
+DEVICE_NAME_HOST = "host_node"  # create_resource 固定在 host_node 上执行
+DEVICE_NAME_DEFAULT = "PRCXI"  # transfer_liquid, set_liquid_from_plate 等动作的默认设备名
+
+# 节点类型
+NODE_TYPE_DEFAULT = "ILab"  # 所有节点的默认类型
+
 # create_resource 节点默认参数
 CREATE_RESOURCE_DEFAULTS = {
     "device_id": "/PRCXI",
@@ -367,6 +385,21 @@ def build_protocol_graph(
                 "res_id": res_id,
             }
 
+    # 创建 Group 节点，包含所有 create_resource 节点
+    group_node_id = str(uuid.uuid4())
+    G.add_node(
+        group_node_id,
+        name="Resources Group",
+        type="Group",
+        parent_uuid="",
+        lab_node_type="Device",
+        template_name="",
+        resource_name="",
+        footer="",
+        minimized=True,
+        param=None,
+    )
+
     # 为每个唯一的 slot 创建 create_resource 节点
     res_index = 0
     last_create_resource_id = None
@@ -383,6 +416,10 @@ def build_protocol_graph(
             description=f"Create plate on slot {slot}",
             lab_node_type="Labware",
             footer="create_resource-host_node",
+            device_name=DEVICE_NAME_HOST,
+            type=NODE_TYPE_DEFAULT,
+            parent_uuid=group_node_id,  # 指向 Group 节点
+            minimized=True,  # 折叠显示
             param={
                 "res_id": res_id,
                 "device_id": CREATE_RESOURCE_DEFAULTS["device_id"],
@@ -400,6 +437,21 @@ def build_protocol_graph(
         last_create_resource_id = node_id
 
     # ==================== 第二步：为每个 reagent 创建 set_liquid_from_plate 节点 ====================
+    # 创建 Group 节点，包含所有 set_liquid_from_plate 节点
+    set_liquid_group_id = str(uuid.uuid4())
+    G.add_node(
+        set_liquid_group_id,
+        name="SetLiquid Group",
+        type="Group",
+        parent_uuid="",
+        lab_node_type="Device",
+        template_name="",
+        resource_name="",
+        footer="",
+        minimized=True,
+        param=None,
+    )
+
     set_liquid_index = 0
     last_set_liquid_id = last_create_resource_id  # set_liquid_from_plate 连接在 create_resource 之后
 
@@ -430,6 +482,10 @@ def build_protocol_graph(
             description=f"Set liquid: {labware_id}",
             lab_node_type="Reagent",
             footer="set_liquid_from_plate-liquid_handler.prcxi",
+            device_name=DEVICE_NAME_DEFAULT,
+            type=NODE_TYPE_DEFAULT,
+            parent_uuid=set_liquid_group_id,  # 指向 Group 节点
+            minimized=True,  # 折叠显示
             param={
                 "plate": [],  # 通过连接传递
                 "well_names": wells,  # 孔位名数组，如 ["A1", "A3", "A5"]
@@ -544,9 +600,11 @@ def build_protocol_graph(
             if param_key in params:
                 params[param_key] = []
 
-        # 更新 step 的 param 和 footer
+        # 更新 step 的 param、footer、device_name 和 type
         step_copy = step.copy()
         step_copy["param"] = params
+        step_copy["device_name"] = DEVICE_NAME_DEFAULT  # 动作节点使用默认设备名
+        step_copy["type"] = NODE_TYPE_DEFAULT  # 节点类型
 
         # 如果有警告，修改 footer 添加警告标记（警告放前面）
         if warnings:

unilabos/workflow/from_python_script.py

@@ -0,0 +1,241 @@
+import ast
+import json
+from typing import Dict, List, Any, Tuple, Optional
+
+from .common import WorkflowGraph, RegistryAdapter
+
+Json = Dict[str, Any]
+
+# ---------------- Converter ----------------
+
+class DeviceMethodConverter:
+    """
+    - 字段统一：resource_name（原 device_class）、template_name（原 action_key）
+    - params 单层；inputs 使用 'params.' 前缀
+    - SimpleGraph.add_workflow_node 负责变量连线与边
+    """
+    def __init__(self, device_registry: Optional[Dict[str, Any]] = None):
+        self.graph = WorkflowGraph()
+        self.variable_sources: Dict[str, Dict[str, Any]] = {}        # var -> {node_id, output_name}
+        self.instance_to_resource: Dict[str, Optional[str]] = {}     # 实例名 -> resource_name
+        self.node_id_counter: int = 0
+        self.registry = RegistryAdapter(device_registry or {})
+
+    # ---- helpers ----
+    def _new_node_id(self) -> int:
+        nid = self.node_id_counter
+        self.node_id_counter += 1
+        return nid
+
+    def _assign_targets(self, targets) -> List[str]:
+        names: List[str] = []
+        import ast
+        if isinstance(targets, ast.Tuple):
+            for elt in targets.elts:
+                if isinstance(elt, ast.Name):
+                    names.append(elt.id)
+        elif isinstance(targets, ast.Name):
+            names.append(targets.id)
+        return names
+
+    def _extract_device_instantiation(self, node) -> Optional[Tuple[str, str]]:
+        import ast
+        if not isinstance(node.value, ast.Call):
+            return None
+        callee = node.value.func
+        if isinstance(callee, ast.Name):
+            class_name = callee.id
+        elif isinstance(callee, ast.Attribute) and isinstance(callee.value, ast.Name):
+            class_name = callee.attr
+        else:
+            return None
+        if isinstance(node.targets[0], ast.Name):
+            instance = node.targets[0].id
+            return instance, class_name
+        return None
+
+    def _extract_call(self, call) -> Tuple[str, str, Dict[str, Any], str]:
+        import ast
+        owner_name, method_name, call_kind = "", "", "func"
+        if isinstance(call.func, ast.Attribute):
+            method_name = call.func.attr
+            if isinstance(call.func.value, ast.Name):
+                owner_name = call.func.value.id
+                call_kind = "instance" if owner_name in self.instance_to_resource else "class_or_module"
+            elif isinstance(call.func.value, ast.Attribute) and isinstance(call.func.value.value, ast.Name):
+                owner_name = call.func.value.attr
+                call_kind = "class_or_module"
+        elif isinstance(call.func, ast.Name):
+            method_name = call.func.id
+            call_kind = "func"
+
+        def pack(node):
+            if isinstance(node, ast.Name):
+                return {"type": "variable", "value": node.id}
+            if isinstance(node, ast.Constant):
+                return {"type": "constant", "value": node.value}
+            if isinstance(node, ast.Dict):
+                return {"type": "dict", "value": self._parse_dict(node)}
+            if isinstance(node, ast.List):
+                return {"type": "list", "value": self._parse_list(node)}
+            return {"type": "raw", "value": ast.unparse(node) if hasattr(ast, "unparse") else str(node)}
+
+        args: Dict[str, Any] = {}
+        pos: List[Any] = []
+        for a in call.args:
+            pos.append(pack(a))
+        for kw in call.keywords:
+            args[kw.arg] = pack(kw.value)
+        if pos:
+            args["_positional"] = pos
+        return owner_name, method_name, args, call_kind
+
+    def _parse_dict(self, node) -> Dict[str, Any]:
+        import ast
+        out: Dict[str, Any] = {}
+        for k, v in zip(node.keys, node.values):
+            if isinstance(k, ast.Constant):
+                key = str(k.value)
+                if isinstance(v, ast.Name):
+                    out[key] = f"var:{v.id}"
+                elif isinstance(v, ast.Constant):
+                    out[key] = v.value
+                elif isinstance(v, ast.Dict):
+                    out[key] = self._parse_dict(v)
+                elif isinstance(v, ast.List):
+                    out[key] = self._parse_list(v)
+        return out
+
+    def _parse_list(self, node) -> List[Any]:
+        import ast
+        out: List[Any] = []
+        for elt in node.elts:
+            if isinstance(elt, ast.Name):
+                out.append(f"var:{elt.id}")
+            elif isinstance(elt, ast.Constant):
+                out.append(elt.value)
+            elif isinstance(elt, ast.Dict):
+                out.append(self._parse_dict(elt))
+            elif isinstance(elt, ast.List):
+                out.append(self._parse_list(elt))
+        return out
+
+    def _normalize_var_tokens(self, x: Any) -> Any:
+        if isinstance(x, str) and x.startswith("var:"):
+            return {"__var__": x[4:]}
+        if isinstance(x, list):
+            return [self._normalize_var_tokens(i) for i in x]
+        if isinstance(x, dict):
+            return {k: self._normalize_var_tokens(v) for k, v in x.items()}
+        return x
+
+    def _make_params_payload(self, resource_name: Optional[str], template_name: str, call_args: Dict[str, Any]) -> Dict[str, Any]:
+        input_keys = self.registry.get_action_input_keys(resource_name, template_name) if resource_name else []
+        defaults = self.registry.get_action_goal_default(resource_name, template_name) if resource_name else {}
+        params: Dict[str, Any] = dict(defaults)
+
+        def unpack(p):
+            t, v = p.get("type"), p.get("value")
+            if t == "variable":
+                return {"__var__": v}
+            if t == "dict":
+                return self._normalize_var_tokens(v)
+            if t == "list":
+                return self._normalize_var_tokens(v)
+            return v
+
+        for k, p in call_args.items():
+            if k == "_positional":
+                continue
+            params[k] = unpack(p)
+
+        pos = call_args.get("_positional", [])
+        if pos:
+            if input_keys:
+                for i, p in enumerate(pos):
+                    if i >= len(input_keys):
+                        break
+                    name = input_keys[i]
+                    if name in params:
+                        continue
+                    params[name] = unpack(p)
+            else:
+                for i, p in enumerate(pos):
+                    params[f"arg_{i}"] = unpack(p)
+        return params
+
+    # ---- handlers ----
+    def _on_assign(self, stmt):
+        import ast
+        inst = self._extract_device_instantiation(stmt)
+        if inst:
+            instance, code_class = inst
+            resource_name = self.registry.resolve_resource_by_classname(code_class)
+            self.instance_to_resource[instance] = resource_name
+            return
+
+        if isinstance(stmt.value, ast.Call):
+            owner, method, call_args, kind = self._extract_call(stmt.value)
+            if kind == "instance":
+                device_key = owner
+                resource_name = self.instance_to_resource.get(owner)
+            else:
+                device_key = owner
+                resource_name = self.registry.resolve_resource_by_classname(owner)
+
+            module = self.registry.get_device_module(resource_name)
+            params = self._make_params_payload(resource_name, method, call_args)
+
+            nid = self._new_node_id()
+            self.graph.add_workflow_node(
+                nid,
+                device_key=device_key,
+                resource_name=resource_name,      # ✅
+                module=module,
+                template_name=method,             # ✅
+                params=params,
+                variable_sources=self.variable_sources,
+                add_ready_if_no_vars=True,
+                prev_node_id=(nid - 1) if nid > 0 else None,
+            )
+
+            out_vars = self._assign_targets(stmt.targets[0])
+            for var in out_vars:
+                self.variable_sources[var] = {"node_id": nid, "output_name": "result"}
+
+    def _on_expr(self, stmt):
+        import ast
+        if not isinstance(stmt.value, ast.Call):
+            return
+        owner, method, call_args, kind = self._extract_call(stmt.value)
+        if kind == "instance":
+            device_key = owner
+            resource_name = self.instance_to_resource.get(owner)
+        else:
+            device_key = owner
+            resource_name = self.registry.resolve_resource_by_classname(owner)
+
+        module = self.registry.get_device_module(resource_name)
+        params = self._make_params_payload(resource_name, method, call_args)
+
+        nid = self._new_node_id()
+        self.graph.add_workflow_node(
+            nid,
+            device_key=device_key,
+            resource_name=resource_name,      # ✅
+            module=module,
+            template_name=method,             # ✅
+            params=params,
+            variable_sources=self.variable_sources,
+            add_ready_if_no_vars=True,
+            prev_node_id=(nid - 1) if nid > 0 else None,
+        )
+
+    def convert(self, python_code: str):
+        tree = ast.parse(python_code)
+        for stmt in tree.body:
+            if isinstance(stmt, ast.Assign):
+                self._on_assign(stmt)
+            elif isinstance(stmt, ast.Expr):
+                self._on_expr(stmt)
+        return self

unilabos/workflow/from_xdl.py

@@ -0,0 +1,131 @@
+from typing import List, Any, Dict
+import xml.etree.ElementTree as ET
+
+
+def convert_to_type(val: str) -> Any:
+    """将字符串值转换为适当的数据类型"""
+    if val == "True":
+        return True
+    if val == "False":
+        return False
+    if val == "?":
+        return None
+    if val.endswith(" g"):
+        return float(val.split(" ")[0])
+    if val.endswith("mg"):
+        return float(val.split("mg")[0])
+    elif val.endswith("mmol"):
+        return float(val.split("mmol")[0]) / 1000
+    elif val.endswith("mol"):
+        return float(val.split("mol")[0])
+    elif val.endswith("ml"):
+        return float(val.split("ml")[0])
+    elif val.endswith("RPM"):
+        return float(val.split("RPM")[0])
+    elif val.endswith(" °C"):
+        return float(val.split(" ")[0])
+    elif val.endswith(" %"):
+        return float(val.split(" ")[0])
+    return val
+
+
+def flatten_xdl_procedure(procedure_elem: ET.Element) -> List[ET.Element]:
+    """展平嵌套的XDL程序结构"""
+    flattened_operations = []
+    TEMP_UNSUPPORTED_PROTOCOL = ["Purge", "Wait", "Stir", "ResetHandling"]
+
+    def extract_operations(element: ET.Element):
+        if element.tag not in ["Prep", "Reaction", "Workup", "Purification", "Procedure"]:
+            if element.tag not in TEMP_UNSUPPORTED_PROTOCOL:
+                flattened_operations.append(element)
+
+        for child in element:
+            extract_operations(child)
+
+    for child in procedure_elem:
+        extract_operations(child)
+
+    return flattened_operations
+
+
+def parse_xdl_content(xdl_content: str) -> tuple:
+    """解析XDL内容"""
+    try:
+        xdl_content_cleaned = "".join(c for c in xdl_content if c.isprintable())
+        root = ET.fromstring(xdl_content_cleaned)
+
+        synthesis_elem = root.find("Synthesis")
+        if synthesis_elem is None:
+            return None, None, None
+
+        # 解析硬件组件
+        hardware_elem = synthesis_elem.find("Hardware")
+        hardware = []
+        if hardware_elem is not None:
+            hardware = [{"id": c.get("id"), "type": c.get("type")} for c in hardware_elem.findall("Component")]
+
+        # 解析试剂
+        reagents_elem = synthesis_elem.find("Reagents")
+        reagents = []
+        if reagents_elem is not None:
+            reagents = [{"name": r.get("name"), "role": r.get("role", "")} for r in reagents_elem.findall("Reagent")]
+
+        # 解析程序
+        procedure_elem = synthesis_elem.find("Procedure")
+        if procedure_elem is None:
+            return None, None, None
+
+        flattened_operations = flatten_xdl_procedure(procedure_elem)
+        return hardware, reagents, flattened_operations
+
+    except ET.ParseError as e:
+        raise ValueError(f"Invalid XDL format: {e}")
+
+
+def convert_xdl_to_dict(xdl_content: str) -> Dict[str, Any]:
+    """
+    将XDL XML格式转换为标准的字典格式
+
+    Args:
+        xdl_content: XDL XML内容
+
+    Returns:
+        转换结果，包含步骤和器材信息
+    """
+    try:
+        hardware, reagents, flattened_operations = parse_xdl_content(xdl_content)
+        if hardware is None:
+            return {"error": "Failed to parse XDL content", "success": False}
+
+        # 将XDL元素转换为字典格式
+        steps_data = []
+        for elem in flattened_operations:
+            # 转换参数类型
+            parameters = {}
+            for key, val in elem.attrib.items():
+                converted_val = convert_to_type(val)
+                if converted_val is not None:
+                    parameters[key] = converted_val
+
+            step_dict = {
+                "operation": elem.tag,
+                "parameters": parameters,
+                "description": elem.get("purpose", f"Operation: {elem.tag}"),
+            }
+            steps_data.append(step_dict)
+
+        # 合并硬件和试剂为统一的labware_info格式
+        labware_data = []
+        labware_data.extend({"id": hw["id"], "type": "hardware", **hw} for hw in hardware)
+        labware_data.extend({"name": reagent["name"], "type": "reagent", **reagent} for reagent in reagents)
+
+        return {
+            "success": True,
+            "steps": steps_data,
+            "labware": labware_data,
+            "message": f"Successfully converted XDL to dict format. Found {len(steps_data)} steps and {len(labware_data)} labware items.",
+        }
+
+    except Exception as e:
+        error_msg = f"XDL conversion failed: {str(e)}"
+        return {"error": error_msg, "success": False}